Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus7.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus7.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus7.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus7.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus7.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.report.clus7.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.report.clus7.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.report.clus7.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.report.clus7.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus7.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus7.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.report.clus7.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus7.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.report.clus7.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus7.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus7.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus7.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus7.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus7.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus7.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus7.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus7.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus7.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus7.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.report.clus7.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus7.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus7.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus7.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.report.clus7.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.report.clus7.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.report.clus7.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus7.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus7.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus7.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.report.clus7.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus7.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.report.clus7.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus7.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus7.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus7.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.report.clus7.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus7.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus7.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus7.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus7.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus7.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus7.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus7.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus7.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus7.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus7.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus7.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.report.clus7.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus7.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus7.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus7.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus7.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.report.clus7.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.report.clus7.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.report.clus7.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus7.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.report.clus7.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus7.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus7.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.report.clus7.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.report.clus7.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.report.clus7.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus7.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus7.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus7.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus7.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus7.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.report.clus7.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus7.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus7.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus7.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.report.clus7.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.report.clus7.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus7.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.report.clus7.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.report.clus7.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus7.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.report.clus7.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus7.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus7.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.report.clus7.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus7.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.report.clus7.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus7.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.report.clus7.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.report.clus7.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus7.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus7.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus7.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus7.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.report.clus7.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus7.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus7.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.report.clus7.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.report.clus7.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus7.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus7.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus7.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus7.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus7.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.report.clus7.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus7.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.report.clus7.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.report.clus7.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.report.clus7.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.report.clus7.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus7.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus7.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus7.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus7.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus7.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus7.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus7.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus7.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus7.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus7.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus7.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus7.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus7.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus7.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus7.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus7.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus7.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus7.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus7.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus7.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus7.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus7.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus7.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus7.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus7.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus7.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus7.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.report.clus7.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus7.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus7.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.report.clus7.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus7.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus7.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.report.clus7.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.report.clus7.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus7.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus7.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.report.clus7.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus7.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus7.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus7.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus7.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus7.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.report.clus7.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus7.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.report.clus7.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.report.clus7.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.report.clus7.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus7.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus7.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus7.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus7.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus7.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus7.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.report.clus7.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.report.clus7.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus7.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus7.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.report.clus7.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus7.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus7.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.report.clus7.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus7.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus7.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus7.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.report.clus7.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.report.clus7.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus7.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.report.clus7.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.report.clus7.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus7.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus7.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus7.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus7.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.report.clus7.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.report.clus7.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.report.clus7.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus7.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus7.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus7.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.report.clus7.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus7.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus7.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus7.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus7.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus7.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus7.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.report.clus7.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus7.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus7.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.report.clus7.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus7.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.report.clus7.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus7.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.report.clus7.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus7.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.report.clus7.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus7.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus7.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.report.clus7.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.report.clus7.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus7.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.report.clus7.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.report.clus7.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.report.clus7.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.report.clus7.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus7.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus7.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.report.clus7.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus7.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus7.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.report.clus7.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus7.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus7.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus7.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus7.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.report.clus7.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.report.clus7.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus7.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus7.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus7.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.report.clus7.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus7.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus7.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus7.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus7.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus7.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus7.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus7.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.report.clus7.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus7.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus7.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.report.clus7.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus7.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus7.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus7.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.report.clus7.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.report.clus7.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus7.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.report.clus7.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus7.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus7.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.report.clus7.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus7.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus7.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus7.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.report.clus7.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus7.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus7.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus2.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus2.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.report.clus2.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus2.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus2.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus2.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.report.clus2.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus2.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus2.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus2.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus2.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus2.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.report.clus2.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.report.clus2.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.report.clus2.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.report.clus2.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus6.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus6.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus6.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus6.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.report.clus6.348.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus6.320.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus6.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus6.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus6.316.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus6.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus6.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.report.clus6.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.report.clus6.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.report.clus6.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus6.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus6.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus6.312.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus6.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus6.302.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus6.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus6.301.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus6.296.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus6.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus6.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus6.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus6.314.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.report.clus6.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.report.clus6.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus6.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.report.clus6.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus6.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus6.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus6.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.report.clus6.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.report.clus6.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus6.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus6.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus6.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.report.clus6.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus6.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus6.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus6.290.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus6.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus6.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus6.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.report.clus6.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.report.clus6.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus6.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus6.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus6.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.report.clus6.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.report.clus6.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus6.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.report.clus6.305.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus6.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus6.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus6.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus6.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus6.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus6.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus6.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus6.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus6.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.report.clus6.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.report.clus6.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus6.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.report.clus6.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus6.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.319.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus6.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus6.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus6.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.report.clus6.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus6.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus6.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus6.337.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus6.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus6.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus6.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus6.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus6.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus6.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.report.clus6.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus6.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus6.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus6.331.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus6.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus6.346.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus6.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus6.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.report.clus6.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus6.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus6.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus6.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.report.clus6.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus6.332.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus6.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus6.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus6.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus6.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.report.clus6.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.report.clus6.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus6.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus6.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.report.clus6.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus6.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.report.clus6.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus6.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus6.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.report.clus6.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.report.clus6.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus6.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus6.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.report.clus6.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.report.clus6.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.report.clus6.297.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.report.clus6.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus6.307.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus6.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus6.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.report.clus6.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus6.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus6.339.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus6.347.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.report.clus6.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus6.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.report.clus6.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.report.clus6.299.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus6.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus6.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus6.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus6.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus6.304.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.report.clus6.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus6.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus6.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus6.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus6.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.report.clus6.322.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.report.clus6.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus6.350.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus6.291.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus6.295.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus6.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus6.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus6.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.report.clus6.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus6.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus6.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.report.clus6.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus6.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.report.clus6.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus6.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus6.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus6.333.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus6.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus6.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus6.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus6.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus6.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus6.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.report.clus6.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus6.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.report.clus6.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus6.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus6.294.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus6.293.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus6.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus6.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus6.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus6.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus6.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus6.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.report.clus6.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus6.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus6.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus6.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.report.clus6.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus6.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus6.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.report.clus6.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus6.325.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus6.308.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.report.clus6.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus6.298.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus6.317.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus6.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus6.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.report.clus6.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus6.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus6.342.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus6.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.report.clus6.327.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus6.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus6.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus6.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus6.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus6.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus6.313.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus6.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus6.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus6.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus6.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus6.318.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus6.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus6.288.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus6.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.report.clus6.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.report.clus6.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus6.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus6.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.report.clus6.328.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.report.clus6.309.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus6.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus6.326.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.report.clus6.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus6.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.report.clus6.289.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus6.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus6.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus6.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.report.clus6.338.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus6.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.report.clus6.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus6.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.report.clus6.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.report.clus6.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus6.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus6.300.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus6.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus6.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.report.clus6.335.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus6.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus6.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus6.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus6.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus6.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus6.344.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.315.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus6.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.report.clus6.323.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus6.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.report.clus6.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus6.336.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus6.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus6.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus6.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.report.clus6.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus6.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus6.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus6.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus6.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus6.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus6.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus6.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus6.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus6.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus6.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.report.clus6.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus6.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus6.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus6.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.report.clus6.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus6.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus6.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.report.clus6.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus6.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.report.clus6.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus6.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus6.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.report.clus6.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus6.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus6.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus6.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus6.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus6.341.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus6.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus6.340.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus6.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus6.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.report.clus6.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.report.clus6.292.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus6.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus6.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus6.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus6.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus6.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus6.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus6.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus6.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus6.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.report.clus6.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.report.clus6.343.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus6.310.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus6.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus6.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus6.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus6.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus6.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.report.clus6.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus6.334.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.report.clus6.306.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus6.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.report.clus6.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus6.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus6.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.report.clus6.329.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus6.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus6.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.report.clus6.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus6.311.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus6.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus6.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus6.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus6.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus6.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus6.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.report.clus6.349.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus6.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.report.clus6.321.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus6.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus6.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus6.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus6.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus6.345.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus6.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus6.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus6.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus6.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus6.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.report.clus6.324.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus6.303.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus6.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus6.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus6.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.report.clus6.330.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus3.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.report.clus3.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus3.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus3.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus3.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus3.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus3.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus3.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus3.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus3.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus3.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus3.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus3.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.report.clus3.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus3.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus3.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus3.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus3.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.report.clus3.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.report.clus3.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus3.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.report.clus3.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus3.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus3.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus3.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.report.clus3.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.report.clus3.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus3.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus3.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus3.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus3.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.report.clus3.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus3.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus3.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus3.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus3.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus3.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus3.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus3.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.report.clus3.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.report.clus3.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.report.clus3.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus3.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.report.clus3.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus3.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus3.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus3.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus3.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus3.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus3.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus3.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus3.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus3.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus3.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus3.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus3.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus3.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus3.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus3.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus3.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus3.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus3.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus3.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus3.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus3.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus3.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus3.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus3.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.report.clus3.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus3.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus3.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus3.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus3.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus3.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus3.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus3.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.report.clus3.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus3.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus3.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus3.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus3.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.report.clus3.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus3.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus3.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus3.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.report.clus3.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus3.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.report.clus3.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus3.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.report.clus3.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.report.clus3.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus3.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.report.clus3.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus3.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus3.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.report.clus3.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.report.clus3.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.report.clus3.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus3.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.report.clus3.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.report.clus3.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus3.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.report.clus3.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus3.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus3.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus3.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.report.clus3.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus3.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus3.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus3.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus3.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus3.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus3.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus3.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus3.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus3.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus3.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus3.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.report.clus3.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus3.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus3.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus3.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus3.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.report.clus3.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus3.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus3.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus3.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.report.clus3.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus3.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.report.clus3.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus3.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.report.clus3.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus3.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus3.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.report.clus3.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus3.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.report.clus3.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus3.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus3.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.report.clus3.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.report.clus3.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus3.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus3.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.report.clus3.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.report.clus3.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus3.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus3.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus3.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.report.clus3.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus3.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.report.clus3.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus3.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus3.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus3.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus3.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus3.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus3.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus3.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus3.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus3.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus3.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus3.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus3.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus3.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus3.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.report.clus3.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus3.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus3.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus3.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.report.clus3.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus3.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus3.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.report.clus3.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus3.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus3.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.report.clus3.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus3.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus3.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus3.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.report.clus3.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.report.clus3.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus3.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus3.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.report.clus3.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus3.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.report.clus3.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus3.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus3.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus3.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.report.clus3.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.report.clus3.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus3.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.report.clus3.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus3.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus3.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.report.clus3.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus3.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.report.clus3.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.report.clus3.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus3.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus3.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus3.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus3.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.report.clus3.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.report.clus3.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus3.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus3.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.report.clus3.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.report.clus3.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.report.clus3.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus3.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus3.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.report.clus3.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus3.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.report.clus3.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus3.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus7.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus7.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus7.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.NON.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus7.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus7.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus7.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus7.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus7.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus7.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus7.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus7.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.clus7.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus7.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus7.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus7.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus7.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus7.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus7.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus7.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.volcano_plot.clus7.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus7.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.NON.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus7.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.clus7.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus7.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus7.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus7.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.clus7.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus7.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus7.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus7.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus7.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus7.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus7.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus7.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus7.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus7.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus7.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus7.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus7.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus7.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus7.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus7.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus7.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus7.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus7.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus7.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus7.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus7.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.volcano_plot.NON.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus7.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.clus7.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus7.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus7.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus7.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus7.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus7.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus7.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus7.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus7.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus7.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus7.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus7.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus7.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus7.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus7.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus7.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.volcano_plot.clus7.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus7.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus7.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus7.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus7.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.volcano_plot.NON.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus7.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus7.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus7.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus7.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus7.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.NON.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus7.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus7.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus7.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus7.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus7.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus7.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus7.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.clus7.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus7.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus7.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus7.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus7.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus7.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus7.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus7.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus7.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus7.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus7.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.clus7.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus7.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.NON.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus7.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus7.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus7.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus7.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.volcano_plot.clus7.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus7.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus7.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.heatmap_plot.clus7.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus7.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus7.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.clus7.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus7.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus7.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus7.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus7.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus7.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus7.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus7.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus7.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus7.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.clus7.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus7.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus7.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus7.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus7.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus7.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus7.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus7.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.clus7.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus7.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus7.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus7.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus7.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus7.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus7.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus7.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.volcano_plot.clus7.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.clus7.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus7.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus7.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus7.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus7.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus7.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus7.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus7.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.heatmap_plot.NON.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus7.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus7.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus7.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus7.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus7.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus7.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus7.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus7.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus7.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus7.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus7.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.NON.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.heatmap_plot.clus7.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus7.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus7.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus7.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.clus7.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus7.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus7.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus7.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus7.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus7.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.volcano_plot.clus7.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus7.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus7.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus7.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus7.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus7.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus7.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.heatmap_plot.clus7.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus7.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus7.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus7.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus7.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus7.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus7.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus7.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus7.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.clus7.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus7.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.clus7.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus7.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus7.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus7.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus7.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus7.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.clus7.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus7.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus7.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus7.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus7.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus7.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus7.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus7.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus7.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.NON.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus7.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus7.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.volcano_plot.NON.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus7.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus7.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.volcano_plot.clus7.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus7.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.clus7.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus7.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus7.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus7.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus7.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.heatmap_plot.clus7.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus7.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus7.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus7.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus7.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus7.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus7.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus7.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus7.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus7.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus7.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus7.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.heatmap_plot.NON.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.clus7.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus7.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus7.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus7.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus7.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus7.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus7.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus7.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus7.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus7.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus7.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus7.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.clus7.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus7.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus7.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus7.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus7.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.clus7.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.clus7.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus7.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus7.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.clus7.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus7.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus7.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus7.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus7.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.heatmap_plot.NON.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus7.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus7.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus7.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus7.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus7.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus7.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus7.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus7.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus7.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus7.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus7.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus7.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus7.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus7.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus7.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus7.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus7.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus7.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus7.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus7.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus7.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus7.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus7.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus7.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus7.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus7.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.heatmap_plot.clus7.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus7.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.clus7.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus7.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus7.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus7.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus7.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus7.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus7.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus7.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus7.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.volcano_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus7.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus7.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.clus7.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus7.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus7.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.NON.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.NON.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus7.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.NON.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus7.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus7.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus7.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus7.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus7.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus7.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus7.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.heatmap_plot.clus7.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus7.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus7.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus7.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus7.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus7.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus7.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus7.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus7.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus7.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus7.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus7.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus7.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus7.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.heatmap_plot.NON.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus7.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus7.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus7.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus7.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus7.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus7.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus7.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus7.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.clus7.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.clus7.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus7.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus7.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus7.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus7.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus7.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus7.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus7.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus7.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus7.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus7.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus7.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus7.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus7.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.volcano_plot.NON.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus7.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus7.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.clus7.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus7.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus7.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus7.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus7.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus7.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus7.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus7.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus7.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus7.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus7.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus7.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus7.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus7.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus7.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus7.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus7.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus7.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus7.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus7.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus7.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus7.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus7.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus7.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus7.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus7.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.clus7.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus7.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus7.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus7.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus7.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus7.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus7.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus7.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus7.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus7.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus7.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.NON.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus7.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus7.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus7.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus7.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus7.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.heatmap_plot.clus7.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus7.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.clus7.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.volcano_plot.clus7.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus7.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus7.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.NON.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus7.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus7.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus7.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus7.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus7.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus7.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus7.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus7.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus7.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus7.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus7.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus7.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.clus7.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus7.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus7.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus7.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus7.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus7.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus7.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus7.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus7.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus7.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus7.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus7.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus7.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus7.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus7.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.clus7.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus7.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.volcano_plot.clus7.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus7.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.NON.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.NON.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus7.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus7.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus7.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.clus7.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus7.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus7.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus7.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus7.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus7.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus7.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus7.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus7.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.NON.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus7.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus7.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus7.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus7.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus7.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus7.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus7.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus7.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.clus7.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.heatmap_plot.clus7.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus7.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus7.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus7.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus7.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.clus7.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.volcano_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus6.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus6.331.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.clus6.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus6.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus6.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus6.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus6.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus6.316.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.NON.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus6.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus6.323.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus6.332.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus6.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus6.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus6.324.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus6.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus6.317.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus6.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus6.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus6.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.heatmap_plot.clus6.330.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus6.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus6.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus6.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.volcano_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus6.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.clus6.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus6.345.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus6.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus6.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus6.327.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus6.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus6.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus6.310.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus6.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus6.335.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus6.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus6.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus6.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus6.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus6.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus6.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus6.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus6.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus6.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus6.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus6.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus6.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus6.350.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus6.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus6.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus6.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus6.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus6.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus6.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus6.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus6.325.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus6.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus6.308.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus6.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus6.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus6.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus6.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus6.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus6.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus6.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.heatmap_plot.clus6.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus6.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus6.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus6.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus6.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus6.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus6.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.heatmap_plot.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus6.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus6.320.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus6.309.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.volcano_plot.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus6.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus6.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus6.346.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.319.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus6.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus6.346.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.heatmap_plot.clus6.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus6.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus6.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus6.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus6.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.clus6.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus6.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus6.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus6.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus6.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus6.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus6.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus6.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus6.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus6.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus6.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus6.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus6.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus6.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus6.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus6.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.volcano_plot.clus6.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus6.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus6.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus6.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus6.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus6.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus6.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus6.313.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus6.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus6.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus6.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus6.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus6.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus6.333.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus6.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus6.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus6.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus6.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.heatmap_plot.clus6.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus6.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus6.321.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus6.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus6.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus6.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus6.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus6.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus6.339.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus6.347.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus6.317.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus6.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus6.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus6.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus6.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus6.341.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus6.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus6.340.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus6.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus6.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus6.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.NON.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus6.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus6.314.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus6.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus6.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus6.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus6.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus6.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus6.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus6.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus6.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus6.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus6.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus6.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus6.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus6.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus6.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus6.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus6.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus6.334.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus6.326.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus6.350.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus6.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus6.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus6.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus6.335.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus6.345.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus6.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus6.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus6.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus6.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus6.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus6.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus6.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus6.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus6.342.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus6.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus6.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus6.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus6.332.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus6.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus6.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus6.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus6.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.307.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus6.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus6.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus6.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus6.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus6.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus6.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus6.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus6.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus6.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus6.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus6.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus6.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus6.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus6.347.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.NON.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus6.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus6.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus6.348.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus6.304.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus6.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus6.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus6.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus6.348.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus6.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus6.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.heatmap_plot.clus6.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus6.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus6.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus6.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus6.341.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus6.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.volcano_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus6.344.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus6.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.clus6.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus6.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus6.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus6.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus6.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus6.324.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus6.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus6.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus6.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus6.342.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus6.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus6.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus6.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus6.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus6.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.clus6.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus6.340.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus6.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus6.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus6.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus6.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus6.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus6.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus6.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus6.338.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus6.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus6.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.volcano_plot.clus6.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus6.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.315.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus6.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus6.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus6.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus6.310.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus6.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus6.333.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus6.306.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.volcano_plot.clus6.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus6.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus6.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus6.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus6.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus6.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus6.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus6.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus6.304.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus6.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus6.305.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus6.327.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus6.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus6.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus6.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus6.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus6.334.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus6.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus6.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus6.326.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus6.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus6.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus6.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus6.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus6.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus6.322.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus6.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus6.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.clus6.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus6.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus6.329.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus6.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus6.321.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus6.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus6.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus6.328.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus6.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus6.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus6.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus6.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus6.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus6.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus6.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus6.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus6.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus6.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus6.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus6.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus6.339.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus6.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus6.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.NON.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus6.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus6.336.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus6.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus6.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus6.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus6.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus6.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus6.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus6.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus6.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus6.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus6.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus6.308.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus6.337.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus6.331.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus6.311.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus6.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus6.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus6.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus6.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus6.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus6.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus6.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus6.328.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus6.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus6.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus6.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus6.306.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus6.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus6.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus6.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus6.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus6.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus6.305.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus6.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus6.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus6.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.319.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus6.318.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus6.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus6.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus6.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus6.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus6.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus6.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus6.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.volcano_plot.clus6.330.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus6.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus6.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus6.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus6.316.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.volcano_plot.clus6.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus6.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus6.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus6.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus6.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus6.318.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus6.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus6.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus6.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus6.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus6.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus6.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus6.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus6.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus6.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus6.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus6.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus6.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus6.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus6.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus6.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus6.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus6.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.volcano_plot.clus6.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus6.320.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus6.322.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus6.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus6.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus6.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus6.309.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus6.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus6.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus6.337.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus6.313.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus6.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus6.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus6.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus6.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.NON.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus6.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus6.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.307.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus6.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus6.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus6.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus6.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus6.338.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus6.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus6.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus6.325.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus6.344.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus6.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.315.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus6.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus6.336.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus6.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus6.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus6.329.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus6.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus6.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus6.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus6.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus6.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus6.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus6.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus6.343.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus6.323.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus6.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus6.314.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.NON.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.heatmap_plot.clus6.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus6.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus6.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus6.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus6.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus6.311.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus6.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus6.343.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus6.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus3.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus3.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus3.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus3.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.NON.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus3.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.heatmap_plot.NON.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus3.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus3.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus3.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.NON.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.heatmap_plot.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.volcano_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus3.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus3.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus3.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus3.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus3.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus3.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.volcano_plot.clus3.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus3.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus3.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus3.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus3.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.heatmap_plot.NON.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.clus3.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.heatmap_plot.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus3.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus3.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.heatmap_plot.clus3.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus3.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.heatmap_plot.clus3.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus3.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus3.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus3.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus3.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus3.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus3.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus3.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.NON.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus3.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus3.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus3.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus3.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.volcano_plot.clus3.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus3.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.NON.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus3.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus3.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus3.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus3.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus3.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus3.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus3.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus3.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus3.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus3.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus3.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus3.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus3.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.volcano_plot.clus3.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus3.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus3.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus3.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus3.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus3.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus3.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus3.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus3.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.NON.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus3.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.NON.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus3.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.heatmap_plot.clus3.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus3.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus3.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus3.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus3.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus3.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.volcano_plot.NON.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.NON.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus3.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus3.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus3.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus3.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus3.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus3.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus3.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus3.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus3.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus3.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus3.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus3.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus3.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus3.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus3.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus3.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus3.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus3.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus3.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus3.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.clus3.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus3.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus3.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.volcano_plot.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus3.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus3.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus3.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.NON.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus3.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.volcano_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus3.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus3.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus3.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus3.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus3.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus3.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus3.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus3.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus3.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus3.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus3.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus3.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus3.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus3.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus3.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus3.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.NON.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus3.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus3.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus3.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.heatmap_plot.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus3.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus3.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus3.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.NON.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus3.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus3.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus3.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus3.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus3.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus3.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus3.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus3.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.volcano_plot.clus3.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus3.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus3.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus3.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus3.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus3.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus3.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus3.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus3.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus3.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.NON.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus3.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus3.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus3.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus3.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus3.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus3.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus3.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus3.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.NON.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus3.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus3.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus3.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus3.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.volcano_plot.clus3.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus3.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus3.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus3.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus3.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus3.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.NON.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus3.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus3.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus3.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus3.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.heatmap_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.clus3.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus3.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus3.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus3.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus3.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus3.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus3.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus3.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.volcano_plot.NON.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.heatmap_plot.NON.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus3.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus3.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.NON.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus3.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus3.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus3.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus3.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus3.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus3.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus3.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus3.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus3.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus3.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.NON.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.heatmap_plot.clus3.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus3.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus3.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus3.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus3.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus3.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus3.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus3.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus3.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.heatmap_plot.clus3.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus3.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus3.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus3.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus3.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus3.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus3.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus3.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus3.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus3.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus3.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.volcano_plot.clus3.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.volcano_plot.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus3.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus3.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus3.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus3.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus3.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus3.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus3.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus3.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus3.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus3.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus3.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus3.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.NON.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus3.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.clus3.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus3.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus3.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus3.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus3.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus3.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus3.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus3.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus3.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus3.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus3.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus3.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus3.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.volcano_plot.NON.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus3.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.NON.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus3.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus3.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus3.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus3.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus3.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus3.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.heatmap_plot.clus3.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus3.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.clus3.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus3.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus3.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.volcano_plot.clus3.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus3.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.clus3.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus3.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus3.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus3.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus3.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus3.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus3.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus3.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus3.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus3.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus3.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus3.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.NON.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus3.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.volcano_plot.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus3.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus3.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus3.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus3.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus3.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus3.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus3.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.heatmap_plot.clus3.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus3.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus3.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus3.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus3.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus3.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus3.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus3.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus3.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus3.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus3.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus3.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus3.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus3.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus3.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus7.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus7.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus7.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus7.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.clus7.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus7.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.clus7.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus7.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus7.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus7.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.clus7.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus7.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus7.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus7.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.clus7.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus7.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus7.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus7.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus7.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus7.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus7.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus7.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus7.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus7.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus7.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus7.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus7.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus7.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.NON.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus7.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus7.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus7.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus7.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus7.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.clus7.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus7.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus7.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus7.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus7.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus7.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus7.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus7.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus7.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus7.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus7.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus7.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus7.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.clus7.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus7.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus7.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus7.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus7.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus7.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.NON.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus7.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.volcano_plot.clus7.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus7.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus7.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.volcano_plot.clus7.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.clus7.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus7.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.heatmap_plot.clus7.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus7.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.clus7.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus7.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus7.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus7.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus7.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus7.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.heatmap_plot.clus7.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus7.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus7.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus7.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.NON.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus7.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus7.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus7.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus7.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.clus7.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus7.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus7.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus7.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus7.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus7.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.NON.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus7.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus7.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus7.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus7.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus7.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus7.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus7.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus7.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus7.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus7.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus7.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus7.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus7.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus7.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus7.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus7.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus7.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.NON.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus7.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus7.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus7.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus7.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus7.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus7.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus7.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus7.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus7.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus7.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus7.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus7.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus7.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus7.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus7.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus7.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus7.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.heatmap_plot.clus7.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus7.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus7.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus7.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus7.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus7.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus7.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus7.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus7.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus7.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus7.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus7.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus7.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus7.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.heatmap_plot.NON.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus7.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus7.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus7.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus7.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus7.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus7.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus7.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus7.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus7.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.NON.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus7.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus7.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus7.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus7.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus7.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus7.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus7.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus7.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus7.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus7.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.clus7.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus7.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus7.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus7.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus7.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus7.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus7.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus7.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus7.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.heatmap_plot.NON.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus7.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus7.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.heatmap_plot.clus7.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus7.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus7.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus7.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.volcano_plot.NON.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus7.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus7.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.clus7.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus7.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus7.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.clus7.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus7.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus7.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus7.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus7.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus7.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.volcano_plot.clus7.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus7.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus7.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus7.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus7.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus7.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.volcano_plot.clus7.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus7.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus7.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus7.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus7.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus7.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus7.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus7.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus7.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus7.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus7.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus7.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.clus7.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus7.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus7.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus7.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus7.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus7.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus7.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.clus7.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.clus7.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus7.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus7.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus7.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus7.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus7.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus7.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus7.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus7.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus7.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus7.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus7.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus7.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus7.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus7.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.NON.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus7.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus7.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.NON.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus7.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus7.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus7.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus7.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus7.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus7.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.clus7.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus7.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.volcano_plot.clus7.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus7.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus7.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus7.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus7.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus7.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.volcano_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.volcano_plot.clus7.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus7.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus7.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus7.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus7.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus7.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus7.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus7.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus7.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.NON.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus7.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus7.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus7.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus7.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus7.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus7.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus7.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.NON.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus7.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus7.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus7.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus7.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus7.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus7.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus7.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus7.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus7.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.clus7.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus7.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus7.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.heatmap_plot.NON.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus7.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus7.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.NON.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus7.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus7.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus7.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.heatmap_plot.clus7.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus7.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus7.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus7.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus7.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus7.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus7.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus7.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus7.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus7.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.heatmap_plot.clus7.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus7.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.NON.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus7.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus7.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus7.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus7.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus7.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus7.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus7.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus7.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus7.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus7.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.clus7.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus7.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus7.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus7.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus7.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus7.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus7.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus7.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus7.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus7.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus7.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.volcano_plot.NON.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus7.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus7.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus7.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus7.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus7.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus7.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus7.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus7.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus7.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus7.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus7.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus7.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus7.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus7.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus7.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.clus7.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus7.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus7.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus7.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus7.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.clus7.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus7.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus7.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus7.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.clus7.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus7.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus7.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus7.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus7.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus7.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus7.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus7.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.heatmap_plot.clus7.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.clus7.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus7.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus7.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus7.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus7.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus7.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.heatmap_plot.clus7.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus7.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus7.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus7.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus7.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus7.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus7.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus7.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus7.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus7.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus7.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus7.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus7.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus7.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus7.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus7.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus7.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus7.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.clus7.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus7.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus7.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus7.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus7.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus7.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus7.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.clus7.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.NON.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.clus7.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.clus7.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus7.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus7.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus7.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus7.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus7.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus7.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus7.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus7.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus7.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus7.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus7.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.volcano_plot.clus7.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus7.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus7.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus7.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus7.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus7.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus7.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus7.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.NON.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus7.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus7.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus7.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus7.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.clus7.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus7.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus7.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus7.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.clus7.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus7.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus7.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus7.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.heatmap_plot.NON.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus7.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus7.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus7.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus7.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus7.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus7.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus7.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus7.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus7.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus7.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus7.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus7.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus7.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus7.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus7.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.volcano_plot.NON.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.clus7.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus7.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus7.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus7.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus7.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus7.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus7.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus7.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus7.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus7.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus7.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus7.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus7.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus7.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus7.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus7.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.volcano_plot.NON.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.clus7.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus7.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus7.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus7.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.clus7.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.volcano_plot.clus7.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.clus7.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus7.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus7.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus7.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.volcano_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus6.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.clus6.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus6.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus6.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus6.325.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus6.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus6.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus6.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus6.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus6.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus6.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus6.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus6.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus6.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus6.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.clus6.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus6.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus6.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.clus6.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus6.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus6.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus6.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus6.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus6.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus6.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus6.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus6.341.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.319.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus6.345.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus6.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus6.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus6.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus6.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus6.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus6.305.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus6.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus6.317.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.heatmap_plot.clus6.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus6.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus6.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus6.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.NON.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus6.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus6.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus6.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus6.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus6.314.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus6.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.NON.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus6.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus6.350.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus6.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus6.320.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus6.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus6.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus6.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus6.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus6.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus6.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus6.342.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus6.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus6.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus6.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus6.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus6.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus6.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus6.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus6.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus6.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus6.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus6.337.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus6.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus6.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus6.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus6.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus6.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus6.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus6.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus6.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus6.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus6.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus6.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus6.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus6.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus6.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus6.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus6.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus6.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus6.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus6.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus6.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.NON.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus6.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus6.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus6.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus6.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus6.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus6.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus6.331.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus6.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus6.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus6.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus6.347.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus6.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus6.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.volcano_plot.clus6.330.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus6.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus6.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus6.338.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus6.335.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus6.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus6.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus6.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus6.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.volcano_plot.clus6.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus6.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus6.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus6.340.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus6.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus6.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus6.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus6.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus6.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus6.339.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus6.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus6.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus6.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus6.327.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus6.310.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus6.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus6.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.volcano_plot.clus6.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus6.322.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.heatmap_plot.clus6.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.315.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus6.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus6.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus6.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus6.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus6.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus6.308.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus6.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus6.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus6.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus6.322.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus6.346.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus6.344.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus6.336.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus6.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus6.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus6.318.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.heatmap_plot.clus6.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus6.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus6.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus6.314.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus6.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus6.341.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus6.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus6.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus6.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus6.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus6.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus6.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus6.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus6.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus6.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus6.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus6.318.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus6.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus6.340.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus6.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus6.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus6.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus6.345.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus6.311.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus6.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus6.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus6.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus6.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus6.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus6.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus6.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus6.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus6.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus6.346.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus6.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus6.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus6.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus6.348.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus6.328.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus6.317.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus6.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus6.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus6.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus6.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus6.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus6.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus6.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus6.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus6.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus6.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus6.334.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus6.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.heatmap_plot.clus6.330.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus6.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus6.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus6.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus6.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus6.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus6.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus6.316.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus6.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus6.323.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus6.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus6.326.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus6.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus6.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus6.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus6.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus6.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus6.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus6.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus6.350.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus6.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus6.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus6.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus6.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus6.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus6.333.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus6.332.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus6.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus6.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus6.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.clus6.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus6.309.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus6.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus6.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus6.304.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus6.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.NON.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus6.309.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus6.326.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus6.329.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus6.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus6.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.319.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus6.338.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus6.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus6.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus6.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus6.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus6.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus6.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus6.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus6.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.volcano_plot.clus6.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus6.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus6.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus6.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus6.321.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus6.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus6.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus6.343.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus6.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus6.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus6.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus6.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus6.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus6.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus6.329.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus6.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus6.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus6.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus6.331.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus6.306.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus6.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus6.344.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus6.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus6.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus6.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus6.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus6.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.315.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus6.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus6.304.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus6.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.307.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus6.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus6.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus6.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus6.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.NON.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.volcano_plot.clus6.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus6.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus6.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus6.313.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus6.325.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus6.324.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.volcano_plot.clus6.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus6.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus6.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus6.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus6.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus6.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.clus6.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus6.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus6.320.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus6.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus6.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus6.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus6.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.volcano_plot.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus6.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.307.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus6.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus6.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus6.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus6.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus6.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus6.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus6.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus6.316.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus6.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus6.337.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus6.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus6.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.heatmap_plot.clus6.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus6.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus6.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus6.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus6.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus6.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus6.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus6.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus6.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus6.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus6.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus6.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus6.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus6.327.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus6.328.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus6.321.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus6.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus6.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus6.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus6.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus6.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus6.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus6.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus6.347.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus6.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus6.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.heatmap_plot.clus6.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus6.332.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus6.342.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus6.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus6.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus6.339.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus6.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus6.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus6.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus6.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus6.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus6.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus6.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus6.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus6.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus6.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus6.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus6.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus6.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus6.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus6.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus6.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus6.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus6.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus6.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus6.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus6.324.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus6.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus6.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus6.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus6.333.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus6.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus6.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus6.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus6.306.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus6.313.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus6.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus6.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus6.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus6.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus6.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus6.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus6.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus6.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.NON.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus6.311.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus6.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus6.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus6.334.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus6.308.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus6.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus6.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus6.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus6.305.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus6.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus6.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.volcano_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus6.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus6.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus6.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus6.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus6.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus6.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus6.348.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus6.310.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus6.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.volcano_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus6.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus6.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus6.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus6.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus6.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus6.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus6.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus6.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus6.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus6.336.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus6.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus6.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus6.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus6.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus6.343.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus6.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.heatmap_plot.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.clus6.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus6.335.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus6.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus6.323.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus6.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus6.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.heatmap_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus3.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus3.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus3.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus3.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus3.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus3.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus3.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus3.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus3.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus3.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus3.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus3.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus3.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus3.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus3.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus3.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus3.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus3.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus3.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus3.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.heatmap_plot.clus3.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus3.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus3.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus3.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus3.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus3.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus3.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.heatmap_plot.clus3.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus3.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus3.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus3.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus3.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus3.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus3.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus3.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus3.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.heatmap_plot.NON.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus3.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus3.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus3.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus3.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus3.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus3.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus3.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus3.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus3.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus3.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.volcano_plot.clus3.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus3.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus3.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus3.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus3.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.volcano_plot.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus3.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus3.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus3.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus3.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus3.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus3.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus3.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus3.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus3.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus3.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus3.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus3.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus3.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus3.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus3.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus3.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus3.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus3.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus3.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus3.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus3.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus3.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus3.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus3.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus3.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.NON.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus3.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.volcano_plot.clus3.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus3.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.NON.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus3.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.NON.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus3.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus3.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus3.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus3.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus3.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.NON.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.heatmap_plot.clus3.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.volcano_plot.clus3.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus3.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus3.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus3.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus3.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus3.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus3.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.NON.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus3.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus3.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.volcano_plot.NON.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus3.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus3.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus3.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus3.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus3.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus3.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus3.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus3.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus3.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus3.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus3.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus3.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus3.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus3.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus3.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus3.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus3.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus3.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.NON.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus3.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus3.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus3.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.heatmap_plot.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.volcano_plot.clus3.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus3.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus3.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus3.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus3.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus3.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.heatmap_plot.clus3.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus3.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.volcano_plot.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus3.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus3.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus3.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus3.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.NON.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus3.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.volcano_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus3.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus3.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus3.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus3.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.NON.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus3.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.NON.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus3.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.heatmap_plot.clus3.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus3.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus3.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus3.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus3.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.volcano_plot.NON.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus3.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus3.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus3.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus3.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus3.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus3.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.heatmap_plot.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus3.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.volcano_plot.NON.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus3.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus3.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus3.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus3.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.NON.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus3.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.heatmap_plot.clus3.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus3.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.NON.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus3.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus3.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus3.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus3.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus3.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus3.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus3.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.volcano_plot.clus3.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus3.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.clus3.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus3.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus3.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.clus3.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus3.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus3.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.NON.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus3.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.clus3.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus3.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.heatmap_plot.clus3.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.heatmap_plot.NON.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus3.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus3.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus3.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus3.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus3.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.volcano_plot.clus3.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus3.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus3.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus3.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus3.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus3.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus3.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus3.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.NON.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.NON.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus3.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus3.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus3.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus3.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus3.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus3.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus3.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus3.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus3.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus3.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus3.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus3.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus3.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus3.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus3.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.NON.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus3.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus3.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus3.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.clus3.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus3.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus3.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus3.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus3.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus3.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus3.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus3.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus3.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus3.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.NON.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus3.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.clus3.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.NON.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus3.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus3.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus3.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus3.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus3.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus3.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus3.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus3.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus3.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus3.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus3.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus3.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus3.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus3.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.NON.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus3.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus3.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus3.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus3.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus3.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus3.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus3.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus3.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus3.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.clus3.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus3.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus3.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus3.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus3.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.heatmap_plot.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus3.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus3.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus3.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus3.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus3.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus3.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.volcano_plot.clus3.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus3.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus3.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus3.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus3.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus3.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.volcano_plot.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.heatmap_plot.NON.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus3.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus3.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus3.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus3.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus3.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus3.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus3.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus3.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus3.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus3.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.volcano_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus3.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus3.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus3.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus3.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus3.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus3.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus3.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	BRCA-TP.mergedcluster.txt	gdac.broadinstitute.org_BRCA-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus7.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus7.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus7.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus7.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus7.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.report.clus7.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.report.clus7.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.report.clus7.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.report.clus7.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus7.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus7.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.report.clus7.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus7.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.report.clus7.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus7.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus7.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus7.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus7.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus7.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus7.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus7.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus7.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus7.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus7.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.report.clus7.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus7.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus7.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus7.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.report.clus7.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.report.clus7.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.report.clus7.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus7.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus7.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus7.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.report.clus7.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus7.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.report.clus7.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus7.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus7.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus7.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.report.clus7.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus7.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus7.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus7.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus7.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus7.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus7.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus7.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus7.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus7.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus7.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus7.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.report.clus7.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus7.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus7.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus7.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus7.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.report.clus7.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.report.clus7.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.report.clus7.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus7.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.report.clus7.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus7.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus7.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.report.clus7.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.report.clus7.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.report.clus7.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus7.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus7.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus7.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus7.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus7.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.report.clus7.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus7.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus7.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus7.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.report.clus7.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.report.clus7.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus7.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.report.clus7.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.report.clus7.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus7.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.report.clus7.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus7.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus7.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.report.clus7.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus7.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.report.clus7.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus7.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.report.clus7.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.report.clus7.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus7.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus7.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus7.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus7.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.report.clus7.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus7.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus7.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.report.clus7.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.report.clus7.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus7.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus7.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus7.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus7.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus7.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.report.clus7.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus7.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.report.clus7.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.report.clus7.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.report.clus7.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.report.clus7.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus7.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus7.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus7.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus7.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus7.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus7.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus7.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus7.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus7.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus7.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus7.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus7.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus7.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus7.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus7.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus7.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus7.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus7.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus7.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus7.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus7.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus7.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus7.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus7.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus7.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus7.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus7.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.report.clus7.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus7.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus7.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.report.clus7.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus7.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus7.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.report.clus7.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.report.clus7.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus7.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus7.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.report.clus7.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus7.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus7.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus7.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus7.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus7.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.report.clus7.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus7.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.report.clus7.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.report.clus7.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.report.clus7.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus7.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus7.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus7.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus7.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus7.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus7.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.report.clus7.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.report.clus7.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus7.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus7.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.report.clus7.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus7.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus7.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.report.clus7.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus7.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus7.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus7.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.report.clus7.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.report.clus7.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus7.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.report.clus7.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.report.clus7.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus7.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus7.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus7.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus7.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.report.clus7.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.report.clus7.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.report.clus7.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus7.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus7.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus7.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.report.clus7.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus7.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus7.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus7.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus7.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus7.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus7.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.report.clus7.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus7.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus7.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.report.clus7.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus7.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.report.clus7.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus7.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.report.clus7.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus7.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.report.clus7.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus7.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus7.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.report.clus7.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.report.clus7.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus7.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.report.clus7.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.report.clus7.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.report.clus7.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.report.clus7.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus7.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus7.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.report.clus7.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus7.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus7.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.report.clus7.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus7.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus7.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus7.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus7.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.report.clus7.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.report.clus7.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus7.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus7.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus7.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.report.clus7.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus7.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus7.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus7.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus7.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus7.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus7.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus7.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.report.clus7.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus7.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus7.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.report.clus7.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus7.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus7.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus7.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.report.clus7.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.report.clus7.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus7.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.report.clus7.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus7.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus7.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.report.clus7.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus7.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus7.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus7.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.report.clus7.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus7.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus7.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus2.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus2.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.report.clus2.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus2.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus2.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus2.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.report.clus2.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus2.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus2.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus2.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus2.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus2.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.report.clus2.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.report.clus2.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.report.clus2.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.report.clus2.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus6.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus6.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus6.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus6.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.report.clus6.348.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus6.320.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus6.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus6.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus6.316.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus6.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus6.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.report.clus6.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.report.clus6.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.report.clus6.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus6.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus6.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus6.312.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus6.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus6.302.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus6.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus6.301.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus6.296.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus6.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus6.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus6.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus6.314.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.report.clus6.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.report.clus6.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus6.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.report.clus6.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus6.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus6.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus6.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.report.clus6.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.report.clus6.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus6.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus6.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus6.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.report.clus6.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus6.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus6.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus6.290.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus6.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus6.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus6.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.report.clus6.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.report.clus6.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus6.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus6.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus6.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.report.clus6.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.report.clus6.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus6.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.report.clus6.305.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus6.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus6.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus6.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus6.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus6.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus6.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus6.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus6.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus6.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.report.clus6.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.report.clus6.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus6.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.report.clus6.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus6.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.319.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus6.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus6.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus6.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.report.clus6.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus6.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus6.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus6.337.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus6.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus6.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus6.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus6.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus6.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus6.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.report.clus6.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus6.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus6.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus6.331.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus6.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus6.346.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus6.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus6.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.report.clus6.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus6.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus6.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus6.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.report.clus6.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus6.332.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus6.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus6.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus6.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus6.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.report.clus6.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.report.clus6.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus6.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus6.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.report.clus6.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus6.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.report.clus6.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus6.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus6.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.report.clus6.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.report.clus6.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus6.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus6.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.report.clus6.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.report.clus6.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.report.clus6.297.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.report.clus6.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus6.307.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus6.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus6.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.report.clus6.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus6.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus6.339.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus6.347.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.report.clus6.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus6.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.report.clus6.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.report.clus6.299.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus6.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus6.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus6.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus6.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus6.304.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.report.clus6.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus6.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus6.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus6.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus6.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.report.clus6.322.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.report.clus6.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus6.350.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus6.291.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus6.295.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus6.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus6.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus6.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.report.clus6.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus6.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus6.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.report.clus6.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus6.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.report.clus6.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus6.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus6.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus6.333.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus6.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus6.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus6.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus6.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus6.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus6.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.report.clus6.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus6.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.report.clus6.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus6.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus6.294.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus6.293.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus6.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus6.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus6.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus6.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus6.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus6.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.report.clus6.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus6.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus6.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus6.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.report.clus6.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus6.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus6.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.report.clus6.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus6.325.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus6.308.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.report.clus6.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus6.298.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus6.317.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus6.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus6.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.report.clus6.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus6.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus6.342.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus6.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.report.clus6.327.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus6.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus6.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus6.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus6.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus6.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus6.313.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus6.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus6.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus6.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus6.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus6.318.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus6.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus6.288.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus6.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.report.clus6.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.report.clus6.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus6.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus6.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.report.clus6.328.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.report.clus6.309.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus6.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus6.326.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.report.clus6.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus6.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.report.clus6.289.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus6.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus6.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus6.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.report.clus6.338.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus6.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.report.clus6.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus6.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.report.clus6.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.report.clus6.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus6.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus6.300.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus6.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus6.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.report.clus6.335.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus6.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus6.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus6.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus6.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus6.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus6.344.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.315.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus6.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.report.clus6.323.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus6.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.report.clus6.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus6.336.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus6.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus6.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus6.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.report.clus6.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus6.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus6.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus6.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus6.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus6.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus6.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus6.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus6.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus6.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus6.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.report.clus6.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus6.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus6.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus6.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.report.clus6.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus6.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus6.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.report.clus6.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus6.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.report.clus6.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus6.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus6.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.report.clus6.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus6.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus6.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus6.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus6.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus6.341.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus6.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus6.340.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus6.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus6.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.report.clus6.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.report.clus6.292.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus6.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus6.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus6.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus6.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus6.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus6.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus6.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus6.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus6.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.report.clus6.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.report.clus6.343.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus6.310.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus6.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus6.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus6.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus6.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus6.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.report.clus6.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus6.334.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.report.clus6.306.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus6.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.report.clus6.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus6.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus6.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.report.clus6.329.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus6.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus6.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.report.clus6.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus6.311.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus6.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus6.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus6.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus6.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus6.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus6.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.report.clus6.349.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus6.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.report.clus6.321.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus6.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus6.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus6.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus6.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus6.345.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus6.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus6.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus6.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus6.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus6.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.report.clus6.324.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus6.303.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus6.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus6.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus6.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.report.clus6.330.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus3.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.report.clus3.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus3.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus3.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus3.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus3.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus3.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus3.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus3.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus3.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus3.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus3.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus3.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.report.clus3.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus3.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus3.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus3.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus3.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.report.clus3.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.report.clus3.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus3.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.report.clus3.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus3.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus3.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus3.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.report.clus3.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.report.clus3.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus3.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus3.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus3.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus3.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.report.clus3.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus3.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus3.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus3.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus3.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus3.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus3.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus3.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.report.clus3.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.report.clus3.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.report.clus3.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus3.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.report.clus3.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus3.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus3.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus3.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus3.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus3.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus3.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus3.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus3.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus3.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus3.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus3.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus3.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus3.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus3.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus3.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus3.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus3.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus3.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus3.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus3.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus3.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus3.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus3.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus3.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.report.clus3.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus3.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus3.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus3.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus3.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus3.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus3.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus3.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.report.clus3.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus3.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus3.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus3.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus3.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.report.clus3.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus3.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus3.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus3.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.report.clus3.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus3.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.report.clus3.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus3.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.report.clus3.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.report.clus3.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus3.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.report.clus3.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus3.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus3.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.report.clus3.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.report.clus3.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.report.clus3.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus3.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.report.clus3.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.report.clus3.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus3.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.report.clus3.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus3.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus3.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus3.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.report.clus3.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus3.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus3.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus3.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus3.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus3.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus3.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus3.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus3.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus3.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus3.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus3.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.report.clus3.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus3.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus3.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus3.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus3.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.report.clus3.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus3.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus3.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus3.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.report.clus3.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus3.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.report.clus3.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus3.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.report.clus3.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus3.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus3.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.report.clus3.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus3.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.report.clus3.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus3.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus3.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.report.clus3.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.report.clus3.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus3.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus3.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.report.clus3.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.report.clus3.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus3.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus3.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus3.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.report.clus3.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus3.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.report.clus3.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus3.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus3.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus3.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus3.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus3.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus3.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus3.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus3.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus3.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus3.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus3.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus3.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus3.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus3.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.report.clus3.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus3.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus3.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus3.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.report.clus3.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus3.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus3.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.report.clus3.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus3.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus3.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.report.clus3.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus3.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus3.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus3.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.report.clus3.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.report.clus3.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus3.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus3.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.report.clus3.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus3.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.report.clus3.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus3.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus3.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus3.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.report.clus3.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.report.clus3.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus3.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.report.clus3.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus3.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus3.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.report.clus3.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus3.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.report.clus3.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.report.clus3.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus3.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus3.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus3.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus3.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.report.clus3.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.report.clus3.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus3.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus3.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.report.clus3.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.report.clus3.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.report.clus3.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus3.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus3.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.report.clus3.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus3.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.report.clus3.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus3.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus7.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus7.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus7.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.NON.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus7.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus7.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus7.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus7.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus7.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus7.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus7.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus7.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.clus7.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus7.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus7.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus7.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus7.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus7.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus7.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus7.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.volcano_plot.clus7.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus7.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.NON.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus7.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.clus7.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus7.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus7.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus7.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.clus7.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus7.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus7.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus7.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus7.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus7.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus7.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus7.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus7.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus7.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus7.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus7.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus7.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus7.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus7.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus7.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus7.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus7.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus7.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus7.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus7.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus7.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.volcano_plot.NON.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus7.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.clus7.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus7.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus7.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus7.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus7.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus7.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus7.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus7.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus7.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus7.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus7.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus7.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus7.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus7.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus7.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus7.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.volcano_plot.clus7.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus7.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus7.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus7.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus7.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.volcano_plot.NON.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus7.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus7.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus7.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus7.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus7.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.NON.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus7.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus7.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus7.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus7.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus7.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus7.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus7.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.clus7.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus7.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus7.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus7.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus7.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus7.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus7.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus7.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus7.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus7.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus7.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.clus7.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus7.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.NON.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus7.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus7.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus7.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus7.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.volcano_plot.clus7.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus7.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus7.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.heatmap_plot.clus7.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus7.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus7.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.clus7.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus7.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus7.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus7.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus7.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus7.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus7.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus7.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus7.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus7.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.clus7.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus7.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus7.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus7.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus7.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus7.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus7.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus7.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.clus7.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus7.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus7.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus7.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus7.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus7.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus7.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus7.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.volcano_plot.clus7.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.clus7.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus7.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus7.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus7.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus7.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus7.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus7.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus7.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.heatmap_plot.NON.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus7.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus7.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus7.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus7.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus7.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus7.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus7.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus7.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus7.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus7.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus7.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.NON.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.heatmap_plot.clus7.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus7.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus7.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus7.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.clus7.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus7.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus7.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus7.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus7.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus7.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.volcano_plot.clus7.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus7.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus7.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus7.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus7.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus7.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus7.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.heatmap_plot.clus7.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus7.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus7.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus7.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus7.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus7.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus7.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus7.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus7.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.clus7.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus7.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.clus7.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus7.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus7.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus7.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus7.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus7.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.clus7.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus7.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus7.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus7.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus7.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus7.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus7.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus7.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus7.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.NON.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus7.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus7.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.volcano_plot.NON.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus7.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus7.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.volcano_plot.clus7.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus7.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.clus7.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus7.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus7.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus7.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus7.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.heatmap_plot.clus7.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus7.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus7.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus7.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus7.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus7.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus7.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus7.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus7.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus7.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus7.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus7.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.heatmap_plot.NON.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.clus7.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus7.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus7.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus7.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus7.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus7.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus7.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus7.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus7.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus7.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus7.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus7.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.clus7.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus7.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus7.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus7.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus7.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.clus7.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.clus7.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus7.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus7.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.clus7.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus7.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus7.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus7.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus7.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.heatmap_plot.NON.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus7.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus7.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus7.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus7.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus7.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus7.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus7.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus7.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus7.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus7.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus7.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus7.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus7.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus7.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus7.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus7.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus7.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus7.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus7.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus7.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus7.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus7.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus7.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus7.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus7.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus7.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.heatmap_plot.clus7.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus7.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.clus7.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus7.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus7.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus7.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus7.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus7.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus7.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus7.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus7.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.volcano_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus7.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus7.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.clus7.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus7.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus7.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.NON.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.NON.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus7.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.NON.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus7.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus7.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus7.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus7.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus7.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus7.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus7.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.heatmap_plot.clus7.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus7.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus7.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus7.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus7.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus7.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus7.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus7.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus7.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus7.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus7.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus7.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus7.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus7.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.heatmap_plot.NON.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus7.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus7.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus7.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus7.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus7.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus7.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus7.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus7.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.clus7.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.clus7.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus7.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus7.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus7.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus7.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus7.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus7.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus7.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus7.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus7.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus7.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus7.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus7.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus7.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.volcano_plot.NON.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus7.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus7.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.clus7.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus7.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus7.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus7.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus7.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus7.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus7.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus7.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus7.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus7.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus7.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus7.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus7.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus7.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus7.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus7.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus7.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus7.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus7.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus7.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus7.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus7.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus7.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus7.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus7.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus7.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.clus7.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus7.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus7.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus7.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus7.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus7.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus7.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus7.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus7.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus7.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus7.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.NON.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus7.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus7.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus7.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus7.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus7.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.heatmap_plot.clus7.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus7.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.clus7.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.volcano_plot.clus7.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus7.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus7.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.NON.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus7.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus7.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus7.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus7.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus7.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus7.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus7.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus7.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus7.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus7.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus7.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus7.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.clus7.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus7.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus7.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus7.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus7.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus7.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus7.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus7.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus7.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus7.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus7.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus7.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus7.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus7.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus7.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.clus7.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus7.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.volcano_plot.clus7.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus7.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.NON.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.NON.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus7.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus7.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus7.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.clus7.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus7.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus7.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus7.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus7.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus7.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus7.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus7.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus7.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.NON.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus7.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus7.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus7.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus7.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus7.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus7.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus7.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus7.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.clus7.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.heatmap_plot.clus7.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus7.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus7.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus7.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus7.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.clus7.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.volcano_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus6.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus6.331.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.clus6.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus6.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus6.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus6.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus6.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus6.316.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.NON.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus6.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus6.323.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus6.332.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus6.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus6.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus6.324.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus6.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus6.317.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus6.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus6.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus6.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.heatmap_plot.clus6.330.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus6.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus6.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus6.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.volcano_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus6.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.clus6.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus6.345.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus6.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus6.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus6.327.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus6.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus6.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus6.310.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus6.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus6.335.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus6.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus6.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus6.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus6.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus6.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus6.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus6.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus6.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus6.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus6.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus6.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus6.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus6.350.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus6.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus6.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus6.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus6.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus6.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus6.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus6.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus6.325.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus6.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus6.308.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus6.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus6.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus6.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus6.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus6.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus6.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus6.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.heatmap_plot.clus6.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus6.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus6.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus6.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus6.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus6.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus6.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.heatmap_plot.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus6.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus6.320.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus6.309.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.volcano_plot.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus6.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus6.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus6.346.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.319.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus6.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus6.346.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.heatmap_plot.clus6.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus6.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus6.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus6.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus6.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.clus6.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus6.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus6.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus6.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus6.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus6.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus6.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus6.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus6.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus6.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus6.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus6.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus6.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus6.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus6.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus6.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.volcano_plot.clus6.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus6.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus6.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus6.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus6.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus6.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus6.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus6.313.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus6.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus6.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus6.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus6.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus6.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus6.333.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus6.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus6.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus6.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus6.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.heatmap_plot.clus6.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus6.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus6.321.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus6.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus6.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus6.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus6.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus6.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus6.339.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus6.347.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus6.317.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus6.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus6.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus6.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus6.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus6.341.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus6.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus6.340.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus6.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus6.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus6.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.NON.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus6.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus6.314.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus6.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus6.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus6.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus6.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus6.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus6.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus6.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus6.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus6.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus6.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus6.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus6.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus6.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus6.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus6.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus6.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus6.334.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus6.326.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus6.350.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus6.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus6.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus6.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus6.335.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus6.345.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus6.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus6.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus6.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus6.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus6.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus6.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus6.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus6.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus6.342.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus6.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus6.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus6.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus6.332.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus6.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus6.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus6.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus6.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.307.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus6.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus6.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus6.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus6.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus6.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus6.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus6.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus6.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus6.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus6.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus6.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus6.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus6.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus6.347.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.NON.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus6.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus6.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus6.348.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus6.304.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus6.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus6.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus6.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus6.348.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus6.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus6.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.heatmap_plot.clus6.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus6.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus6.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus6.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus6.341.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus6.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.volcano_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus6.344.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus6.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.clus6.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus6.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus6.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus6.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus6.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus6.324.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus6.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus6.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus6.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus6.342.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus6.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus6.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus6.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus6.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus6.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.clus6.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus6.340.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus6.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus6.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus6.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus6.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus6.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus6.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus6.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus6.338.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus6.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus6.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.volcano_plot.clus6.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus6.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.315.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus6.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus6.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus6.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus6.310.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus6.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus6.333.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus6.306.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.volcano_plot.clus6.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus6.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus6.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus6.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus6.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus6.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus6.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus6.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus6.304.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus6.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus6.305.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus6.327.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus6.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus6.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus6.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus6.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus6.334.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus6.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus6.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus6.326.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus6.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus6.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus6.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus6.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus6.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus6.322.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus6.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus6.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.clus6.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus6.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus6.329.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus6.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus6.321.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus6.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus6.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus6.328.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus6.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus6.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus6.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus6.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus6.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus6.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus6.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus6.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus6.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus6.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus6.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus6.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus6.339.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus6.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus6.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.NON.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus6.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus6.336.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus6.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus6.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus6.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus6.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus6.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus6.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus6.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus6.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus6.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus6.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus6.308.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus6.337.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus6.331.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus6.311.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus6.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus6.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus6.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus6.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus6.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus6.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus6.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus6.328.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus6.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus6.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus6.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus6.306.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus6.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus6.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus6.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus6.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus6.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus6.305.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus6.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus6.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus6.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.319.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus6.318.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus6.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus6.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus6.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus6.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus6.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus6.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus6.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.volcano_plot.clus6.330.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus6.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus6.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus6.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus6.316.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.volcano_plot.clus6.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus6.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus6.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus6.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus6.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus6.318.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus6.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus6.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus6.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus6.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus6.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus6.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus6.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus6.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus6.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus6.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus6.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus6.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus6.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus6.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus6.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus6.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus6.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.volcano_plot.clus6.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus6.320.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus6.322.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus6.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus6.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus6.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus6.309.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus6.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus6.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus6.337.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus6.313.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus6.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus6.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus6.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus6.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.NON.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus6.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus6.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.307.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus6.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus6.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus6.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus6.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus6.338.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus6.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus6.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus6.325.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus6.344.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus6.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.315.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus6.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus6.336.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus6.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus6.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus6.329.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus6.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus6.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus6.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus6.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus6.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus6.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus6.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus6.343.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus6.323.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus6.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus6.314.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.NON.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.heatmap_plot.clus6.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus6.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus6.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus6.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus6.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus6.311.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus6.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus6.343.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus6.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus3.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus3.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus3.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus3.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.NON.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus3.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.heatmap_plot.NON.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus3.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus3.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus3.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.NON.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.heatmap_plot.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.volcano_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus3.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus3.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus3.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus3.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus3.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus3.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.volcano_plot.clus3.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus3.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus3.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus3.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus3.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.heatmap_plot.NON.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.clus3.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.heatmap_plot.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus3.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus3.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.heatmap_plot.clus3.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus3.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.heatmap_plot.clus3.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus3.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus3.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus3.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus3.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus3.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus3.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus3.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.NON.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus3.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus3.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus3.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus3.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.volcano_plot.clus3.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus3.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.NON.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus3.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus3.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus3.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus3.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus3.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus3.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus3.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus3.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus3.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus3.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus3.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus3.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus3.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.volcano_plot.clus3.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus3.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus3.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus3.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus3.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus3.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus3.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus3.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus3.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.NON.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus3.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.NON.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus3.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.heatmap_plot.clus3.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus3.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus3.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus3.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus3.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus3.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.volcano_plot.NON.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.NON.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus3.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus3.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus3.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus3.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus3.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus3.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus3.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus3.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus3.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus3.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus3.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus3.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus3.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus3.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus3.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus3.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus3.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus3.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus3.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus3.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.clus3.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus3.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus3.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.volcano_plot.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus3.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus3.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus3.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.NON.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus3.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.volcano_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus3.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus3.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus3.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus3.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus3.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus3.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus3.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus3.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus3.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus3.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus3.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus3.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus3.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus3.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus3.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus3.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.NON.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus3.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus3.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus3.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.heatmap_plot.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus3.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus3.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus3.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.NON.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus3.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus3.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus3.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus3.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus3.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus3.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus3.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus3.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.volcano_plot.clus3.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus3.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus3.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus3.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus3.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus3.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus3.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus3.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus3.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus3.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.NON.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus3.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus3.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus3.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus3.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus3.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus3.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus3.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus3.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.NON.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus3.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus3.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus3.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus3.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.volcano_plot.clus3.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus3.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus3.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus3.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus3.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus3.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.NON.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus3.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus3.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus3.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus3.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.heatmap_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.clus3.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus3.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus3.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus3.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus3.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus3.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus3.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus3.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.volcano_plot.NON.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.heatmap_plot.NON.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus3.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus3.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.NON.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus3.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus3.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus3.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus3.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus3.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus3.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus3.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus3.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus3.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus3.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.NON.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.heatmap_plot.clus3.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus3.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus3.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus3.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus3.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus3.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus3.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus3.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus3.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.heatmap_plot.clus3.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus3.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus3.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus3.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus3.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus3.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus3.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus3.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus3.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus3.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus3.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.volcano_plot.clus3.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.volcano_plot.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus3.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus3.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus3.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus3.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus3.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus3.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus3.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus3.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus3.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus3.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus3.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus3.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.NON.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus3.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.clus3.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus3.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus3.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus3.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus3.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus3.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus3.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus3.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus3.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus3.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus3.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus3.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus3.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.volcano_plot.NON.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus3.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.NON.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus3.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus3.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus3.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus3.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus3.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus3.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.heatmap_plot.clus3.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus3.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.clus3.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus3.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus3.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.volcano_plot.clus3.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus3.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.clus3.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus3.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus3.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus3.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus3.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus3.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus3.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus3.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus3.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus3.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus3.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus3.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.NON.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus3.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.volcano_plot.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus3.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus3.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus3.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus3.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus3.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus3.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus3.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.heatmap_plot.clus3.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus3.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus3.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus3.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus3.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus3.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus3.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus3.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus3.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus3.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus3.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus3.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus3.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus3.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus3.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus7.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus7.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus7.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus7.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.clus7.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus7.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.clus7.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus7.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus7.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus7.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.clus7.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus7.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus7.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus7.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.clus7.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus7.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus7.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus7.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus7.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus7.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus7.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus7.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus7.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus7.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus7.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus7.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus7.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus7.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.NON.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus7.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus7.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus7.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus7.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus7.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.clus7.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus7.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus7.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus7.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus7.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus7.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus7.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus7.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus7.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus7.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus7.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus7.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus7.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.clus7.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus7.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus7.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus7.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus7.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus7.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.NON.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus7.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.volcano_plot.clus7.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus7.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus7.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.volcano_plot.clus7.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.clus7.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus7.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.heatmap_plot.clus7.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus7.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.clus7.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus7.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus7.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus7.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus7.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus7.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.heatmap_plot.clus7.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus7.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus7.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus7.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.NON.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus7.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus7.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus7.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus7.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.clus7.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus7.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus7.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus7.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus7.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus7.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.NON.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus7.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus7.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus7.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus7.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus7.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus7.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus7.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus7.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus7.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus7.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus7.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus7.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus7.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus7.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus7.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus7.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus7.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.NON.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus7.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus7.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus7.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus7.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus7.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus7.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus7.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus7.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus7.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus7.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus7.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus7.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus7.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus7.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus7.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus7.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus7.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.heatmap_plot.clus7.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus7.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus7.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus7.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus7.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus7.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus7.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus7.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus7.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus7.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus7.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus7.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus7.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus7.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.heatmap_plot.NON.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus7.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus7.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus7.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus7.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus7.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus7.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus7.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus7.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus7.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.NON.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus7.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus7.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus7.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus7.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus7.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus7.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus7.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus7.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus7.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus7.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.clus7.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus7.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus7.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus7.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus7.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus7.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus7.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus7.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus7.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.heatmap_plot.NON.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus7.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus7.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.heatmap_plot.clus7.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus7.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus7.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus7.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.volcano_plot.NON.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus7.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus7.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.clus7.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus7.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus7.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.clus7.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus7.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus7.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus7.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus7.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus7.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.volcano_plot.clus7.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus7.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus7.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus7.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus7.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus7.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.volcano_plot.clus7.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus7.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus7.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus7.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus7.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus7.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus7.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus7.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus7.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus7.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus7.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus7.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.clus7.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus7.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus7.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus7.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus7.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus7.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus7.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.clus7.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.clus7.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus7.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus7.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus7.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus7.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus7.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus7.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus7.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus7.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus7.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus7.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus7.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus7.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus7.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus7.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.NON.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus7.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus7.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.NON.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus7.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus7.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus7.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus7.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus7.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus7.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.clus7.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus7.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.volcano_plot.clus7.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus7.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus7.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus7.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus7.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus7.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.volcano_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.volcano_plot.clus7.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus7.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus7.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus7.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus7.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus7.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus7.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus7.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus7.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.NON.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus7.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus7.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus7.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus7.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus7.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus7.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus7.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.NON.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus7.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus7.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus7.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus7.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus7.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus7.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus7.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus7.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus7.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.clus7.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus7.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus7.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.heatmap_plot.NON.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus7.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus7.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.NON.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus7.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus7.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus7.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.heatmap_plot.clus7.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus7.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus7.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus7.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus7.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus7.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus7.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus7.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus7.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus7.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.heatmap_plot.clus7.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus7.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.NON.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus7.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus7.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus7.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus7.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus7.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus7.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus7.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus7.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus7.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus7.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.clus7.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus7.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus7.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus7.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus7.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus7.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus7.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus7.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus7.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus7.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus7.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.volcano_plot.NON.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus7.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus7.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus7.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus7.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus7.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus7.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus7.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus7.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus7.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus7.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus7.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus7.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus7.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus7.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus7.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.clus7.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus7.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus7.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus7.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus7.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.clus7.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus7.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus7.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus7.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.clus7.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus7.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus7.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus7.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus7.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus7.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus7.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus7.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.heatmap_plot.clus7.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.clus7.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus7.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus7.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus7.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus7.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus7.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.heatmap_plot.clus7.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus7.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus7.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus7.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus7.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus7.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus7.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus7.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus7.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus7.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus7.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus7.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus7.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus7.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus7.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus7.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus7.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus7.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.clus7.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus7.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus7.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus7.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus7.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus7.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus7.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.clus7.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.NON.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.clus7.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.clus7.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus7.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus7.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus7.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus7.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus7.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus7.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus7.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus7.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus7.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus7.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus7.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.volcano_plot.clus7.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus7.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus7.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus7.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus7.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus7.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus7.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus7.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.NON.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus7.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus7.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus7.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus7.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.clus7.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus7.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus7.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus7.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.clus7.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus7.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus7.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus7.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.heatmap_plot.NON.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus7.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus7.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus7.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus7.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus7.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus7.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus7.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus7.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus7.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus7.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus7.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus7.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus7.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus7.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus7.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.volcano_plot.NON.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.clus7.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus7.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus7.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus7.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus7.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus7.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus7.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus7.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus7.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus7.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus7.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus7.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus7.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus7.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus7.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus7.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.volcano_plot.NON.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.clus7.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus7.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus7.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus7.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.clus7.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.volcano_plot.clus7.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.clus7.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus7.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus7.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus7.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.volcano_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus6.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.clus6.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus6.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus6.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus6.325.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus6.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus6.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus6.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus6.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus6.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus6.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus6.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus6.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus6.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus6.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.clus6.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus6.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus6.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.clus6.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus6.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus6.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus6.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus6.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus6.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus6.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus6.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus6.341.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.319.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus6.345.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus6.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus6.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus6.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus6.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus6.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus6.305.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus6.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus6.317.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.heatmap_plot.clus6.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus6.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus6.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus6.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.NON.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus6.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus6.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus6.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus6.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus6.314.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus6.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.NON.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus6.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus6.350.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus6.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus6.320.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus6.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus6.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus6.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus6.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus6.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus6.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus6.342.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus6.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus6.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus6.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus6.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus6.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus6.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus6.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus6.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus6.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus6.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus6.337.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus6.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus6.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus6.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus6.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus6.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus6.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus6.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus6.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus6.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus6.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus6.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus6.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus6.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus6.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus6.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus6.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus6.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus6.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus6.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus6.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.NON.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus6.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus6.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus6.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus6.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus6.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus6.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus6.331.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus6.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus6.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus6.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus6.347.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus6.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus6.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.volcano_plot.clus6.330.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus6.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus6.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus6.338.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus6.335.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus6.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus6.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus6.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus6.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.volcano_plot.clus6.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus6.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus6.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus6.340.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus6.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus6.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus6.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus6.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus6.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus6.339.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus6.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus6.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus6.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus6.327.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus6.310.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus6.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus6.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.volcano_plot.clus6.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus6.322.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.heatmap_plot.clus6.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.315.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus6.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus6.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus6.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus6.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus6.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus6.308.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus6.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus6.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus6.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus6.322.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus6.346.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus6.344.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus6.336.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus6.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus6.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus6.318.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.heatmap_plot.clus6.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus6.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus6.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus6.314.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus6.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus6.341.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus6.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus6.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus6.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus6.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus6.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus6.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus6.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus6.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus6.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus6.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus6.318.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus6.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus6.340.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus6.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus6.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus6.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus6.345.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus6.311.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus6.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus6.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus6.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus6.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus6.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus6.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus6.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus6.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus6.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus6.346.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus6.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus6.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus6.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus6.348.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus6.328.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus6.317.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus6.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus6.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus6.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus6.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus6.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus6.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus6.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus6.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus6.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus6.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus6.334.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus6.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.heatmap_plot.clus6.330.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus6.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus6.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus6.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus6.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus6.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus6.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus6.316.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus6.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus6.323.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus6.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus6.326.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus6.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus6.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus6.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus6.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus6.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus6.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus6.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus6.350.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus6.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus6.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus6.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus6.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus6.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus6.333.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus6.332.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus6.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus6.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus6.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.clus6.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus6.309.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus6.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus6.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus6.304.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus6.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.NON.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus6.309.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus6.326.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus6.329.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus6.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus6.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.319.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus6.338.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus6.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus6.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus6.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus6.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus6.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus6.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus6.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus6.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.volcano_plot.clus6.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus6.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus6.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus6.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus6.321.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus6.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus6.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus6.343.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus6.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus6.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus6.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus6.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus6.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus6.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus6.329.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus6.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus6.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus6.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus6.331.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus6.306.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus6.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus6.344.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus6.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus6.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus6.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus6.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus6.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.315.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus6.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus6.304.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus6.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.307.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus6.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus6.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus6.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus6.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.NON.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.volcano_plot.clus6.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus6.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus6.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus6.313.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus6.325.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus6.324.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.volcano_plot.clus6.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus6.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus6.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus6.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus6.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus6.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.clus6.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus6.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus6.320.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus6.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus6.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus6.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus6.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.volcano_plot.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus6.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.307.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus6.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus6.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus6.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus6.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus6.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus6.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus6.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus6.316.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus6.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus6.337.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus6.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus6.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.heatmap_plot.clus6.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus6.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus6.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus6.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus6.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus6.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus6.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus6.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus6.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus6.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus6.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus6.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus6.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus6.327.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus6.328.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus6.321.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus6.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus6.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus6.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus6.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus6.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus6.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus6.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus6.347.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus6.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus6.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.heatmap_plot.clus6.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus6.332.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus6.342.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus6.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus6.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus6.339.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus6.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus6.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus6.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus6.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus6.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus6.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus6.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus6.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus6.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus6.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus6.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus6.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus6.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus6.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus6.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus6.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus6.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus6.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus6.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus6.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus6.324.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus6.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus6.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus6.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus6.333.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus6.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus6.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus6.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus6.306.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus6.313.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus6.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus6.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus6.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus6.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus6.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus6.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus6.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus6.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.NON.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus6.311.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus6.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus6.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus6.334.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus6.308.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus6.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus6.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus6.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus6.305.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus6.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus6.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.volcano_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus6.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus6.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus6.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus6.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus6.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus6.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus6.348.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus6.310.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus6.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.volcano_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus6.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus6.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus6.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus6.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus6.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus6.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus6.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus6.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus6.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus6.336.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus6.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus6.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus6.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus6.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus6.343.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus6.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.heatmap_plot.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.clus6.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus6.335.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus6.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus6.323.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus6.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus6.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.heatmap_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus3.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus3.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus3.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus3.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus3.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus3.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus3.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus3.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus3.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus3.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus3.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus3.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus3.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus3.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus3.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus3.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus3.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus3.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus3.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus3.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.heatmap_plot.clus3.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus3.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus3.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus3.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus3.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus3.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus3.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.heatmap_plot.clus3.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus3.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus3.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus3.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus3.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus3.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus3.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus3.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus3.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.heatmap_plot.NON.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus3.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus3.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus3.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus3.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus3.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus3.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus3.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus3.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus3.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus3.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.volcano_plot.clus3.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus3.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus3.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus3.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus3.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.volcano_plot.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus3.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus3.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus3.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus3.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus3.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus3.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus3.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus3.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus3.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus3.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus3.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus3.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus3.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus3.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus3.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus3.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus3.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus3.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus3.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus3.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus3.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus3.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus3.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus3.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus3.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.NON.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus3.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.volcano_plot.clus3.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus3.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.NON.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus3.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.NON.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus3.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus3.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus3.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus3.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus3.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.NON.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.heatmap_plot.clus3.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.volcano_plot.clus3.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus3.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus3.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus3.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus3.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus3.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus3.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.NON.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus3.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus3.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.volcano_plot.NON.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus3.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus3.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus3.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus3.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus3.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus3.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus3.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus3.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus3.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus3.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus3.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus3.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus3.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus3.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus3.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus3.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus3.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus3.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.NON.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus3.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus3.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus3.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.heatmap_plot.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.volcano_plot.clus3.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus3.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus3.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus3.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus3.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus3.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.heatmap_plot.clus3.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus3.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.volcano_plot.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus3.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus3.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus3.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus3.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.NON.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus3.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.volcano_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus3.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus3.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus3.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus3.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.NON.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus3.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.NON.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus3.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.heatmap_plot.clus3.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus3.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus3.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus3.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus3.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.volcano_plot.NON.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus3.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus3.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus3.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus3.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus3.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus3.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.heatmap_plot.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus3.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.volcano_plot.NON.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus3.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus3.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus3.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus3.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.NON.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus3.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.heatmap_plot.clus3.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus3.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.NON.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus3.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus3.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus3.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus3.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus3.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus3.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus3.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.volcano_plot.clus3.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus3.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.clus3.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus3.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus3.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.clus3.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus3.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus3.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.NON.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus3.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.clus3.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus3.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.heatmap_plot.clus3.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.heatmap_plot.NON.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus3.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus3.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus3.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus3.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus3.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.volcano_plot.clus3.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus3.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus3.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus3.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus3.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus3.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus3.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus3.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.NON.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.NON.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus3.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus3.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus3.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus3.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus3.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus3.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus3.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus3.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus3.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus3.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus3.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus3.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus3.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus3.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus3.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.NON.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus3.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus3.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus3.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.clus3.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus3.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus3.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus3.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus3.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus3.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus3.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus3.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus3.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus3.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.NON.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus3.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.clus3.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.NON.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus3.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus3.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus3.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus3.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus3.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus3.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus3.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus3.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus3.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus3.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus3.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus3.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus3.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus3.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.NON.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus3.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus3.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus3.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus3.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus3.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus3.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus3.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus3.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus3.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.clus3.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus3.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus3.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus3.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus3.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.heatmap_plot.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus3.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus3.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus3.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus3.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus3.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus3.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.volcano_plot.clus3.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus3.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus3.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus3.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus3.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus3.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.volcano_plot.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.heatmap_plot.NON.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus3.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus3.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus3.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus3.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus3.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus3.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus3.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus3.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus3.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus3.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.volcano_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus3.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus3.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus3.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus3.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus3.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus3.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus3.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus7.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus7.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus7.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus7.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus7.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.report.clus7.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.report.clus7.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.report.clus7.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.report.clus7.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus7.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus7.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.report.clus7.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus7.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.report.clus7.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus7.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus7.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus7.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus7.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus7.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus7.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus7.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus7.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus7.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus7.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.report.clus7.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.report.clus7.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus7.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus7.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.report.clus7.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.report.clus7.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.report.clus7.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus7.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus7.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus7.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.report.clus7.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus7.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.report.clus7.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus7.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus7.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus7.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.report.clus7.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus7.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus7.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus7.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus7.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus7.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus7.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus7.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus7.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.report.clus7.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus7.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus7.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.report.clus7.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus7.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus7.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus7.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus7.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.report.clus7.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.report.clus7.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.report.clus7.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus7.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.report.clus7.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus7.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus7.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.report.clus7.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.report.clus7.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.report.clus7.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus7.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus7.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus7.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus7.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus7.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.report.clus7.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus7.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus7.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus7.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.report.clus7.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.report.clus7.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus7.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.report.clus7.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.report.clus7.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus7.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.report.clus7.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus7.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus7.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.report.clus7.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus7.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.report.clus7.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus7.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.report.clus7.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.report.clus7.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus7.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus7.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus7.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus7.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.report.clus7.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus7.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus7.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.report.clus7.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.report.clus7.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus7.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus7.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus7.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus7.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus7.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.report.clus7.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus7.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.report.clus7.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.report.clus7.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.report.clus7.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.report.clus7.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus7.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus7.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus7.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus7.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus7.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus7.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus7.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus7.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus7.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus7.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus7.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus7.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus7.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus7.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus7.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus7.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus7.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus7.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus7.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus7.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus7.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus7.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus7.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus7.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus7.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus7.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus7.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.report.clus7.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.report.clus7.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus7.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.report.clus7.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus7.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus7.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.report.clus7.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.report.clus7.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus7.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus7.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.report.clus7.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus7.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus7.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus7.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus7.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus7.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.report.clus7.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus7.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.report.clus7.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.report.clus7.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.report.clus7.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus7.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus7.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus7.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus7.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus7.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus7.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.report.clus7.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.report.clus7.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus7.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus7.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.report.clus7.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus7.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus7.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.report.clus7.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus7.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus7.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus7.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.report.clus7.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.report.clus7.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus7.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.report.clus7.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus7.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.report.clus7.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus7.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus7.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus7.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.report.clus7.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.report.clus7.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.report.clus7.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.report.clus7.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus7.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus7.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus7.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.report.clus7.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus7.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus7.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus7.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus7.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus7.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus7.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.report.clus7.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus7.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus7.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.report.clus7.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus7.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.report.clus7.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus7.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.report.clus7.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus7.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.report.clus7.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus7.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus7.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.report.clus7.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.report.clus7.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus7.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.report.clus7.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.report.clus7.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.report.clus7.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.report.clus7.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus7.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus7.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.report.clus7.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus7.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus7.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.report.clus7.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus7.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus7.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus7.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus7.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.report.clus7.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.report.clus7.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus7.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus7.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus7.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.report.clus7.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus7.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus7.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus7.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus7.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus7.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus7.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus7.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.report.clus7.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus7.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus7.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.report.clus7.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus7.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus7.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus7.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.report.clus7.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.report.clus7.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus7.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.report.clus7.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus7.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus7.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.report.clus7.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus7.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus7.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus7.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.report.clus7.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus7.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus7.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus2.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.report.clus2.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.report.clus2.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.report.clus2.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus2.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus2.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.report.clus2.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.report.clus2.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus2.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus2.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.report.clus2.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus2.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.report.clus2.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.report.clus2.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.report.clus2.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.report.clus2.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.report.clus6.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus6.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.report.clus6.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus6.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.report.clus6.348.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus6.320.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus6.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.report.clus6.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus6.316.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus6.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus6.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.report.clus6.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.report.clus6.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.report.clus6.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.report.clus6.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus6.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus6.312.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus6.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus6.302.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus6.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus6.301.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.report.clus6.296.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus6.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus6.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus6.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus6.314.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.report.clus6.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.report.clus6.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.report.clus6.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.report.clus6.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.report.clus6.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.report.clus6.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus6.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.report.clus6.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.report.clus6.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus6.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus6.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus6.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.report.clus6.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus6.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus6.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.report.clus6.290.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus6.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus6.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus6.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.report.clus6.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.report.clus6.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus6.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus6.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus6.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.report.clus6.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.report.clus6.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus6.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.report.clus6.305.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus6.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus6.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus6.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus6.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus6.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.report.clus6.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.report.clus6.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus6.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus6.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.report.clus6.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.report.clus6.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus6.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.report.clus6.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus6.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.319.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.report.clus6.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus6.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.report.clus6.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.report.clus6.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus6.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus6.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus6.337.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus6.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus6.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus6.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus6.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus6.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.report.clus6.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.report.clus6.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus6.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus6.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus6.331.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus6.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus6.346.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus6.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.report.clus6.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.report.clus6.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus6.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus6.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus6.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.report.clus6.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus6.332.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus6.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus6.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.report.clus6.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus6.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.report.clus6.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.report.clus6.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus6.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus6.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.report.clus6.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus6.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.report.clus6.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus6.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus6.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.report.clus6.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.report.clus6.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus6.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.report.clus6.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.report.clus6.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.report.clus6.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.report.clus6.297.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.report.clus6.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.report.clus6.307.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus6.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus6.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.report.clus6.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus6.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus6.339.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus6.347.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.report.clus6.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus6.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.report.clus6.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.report.clus6.299.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus6.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus6.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus6.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus6.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus6.304.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.report.clus6.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus6.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus6.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.report.clus6.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus6.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.report.clus6.322.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.report.clus6.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus6.350.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.report.clus6.291.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus6.295.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus6.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus6.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus6.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.report.clus6.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus6.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus6.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.report.clus6.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus6.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.report.clus6.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus6.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.report.clus6.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus6.333.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus6.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus6.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus6.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.report.clus6.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus6.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus6.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.report.clus6.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus6.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.report.clus6.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus6.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus6.294.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus6.293.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus6.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus6.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus6.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus6.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus6.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.report.clus6.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.report.clus6.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus6.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus6.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus6.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.report.clus6.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus6.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus6.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.report.clus6.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.report.clus6.325.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.report.clus6.308.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.report.clus6.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus6.298.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus6.317.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus6.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus6.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.report.clus6.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.report.clus6.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus6.342.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus6.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.report.clus6.327.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus6.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.report.clus6.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus6.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.report.clus6.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus6.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus6.313.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus6.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus6.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus6.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.report.clus6.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus6.318.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus6.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus6.288.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus6.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.report.clus6.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.report.clus6.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus6.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus6.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.report.clus6.328.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.report.clus6.309.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus6.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus6.326.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.report.clus6.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus6.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.report.clus6.289.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus6.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus6.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus6.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.report.clus6.338.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus6.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.report.clus6.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.report.clus6.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.report.clus6.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.report.clus6.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus6.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus6.300.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus6.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.report.clus6.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.report.clus6.335.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus6.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus6.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.report.clus6.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus6.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus6.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus6.344.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.315.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus6.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.report.clus6.323.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus6.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.report.clus6.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus6.336.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus6.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus6.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus6.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.report.clus6.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.report.clus6.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus6.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus6.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus6.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus6.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus6.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus6.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus6.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus6.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.report.clus6.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.report.clus6.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus6.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus6.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.report.clus6.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.report.clus6.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus6.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus6.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.report.clus6.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus6.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.report.clus6.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.report.clus6.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.report.clus6.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.report.clus6.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus6.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus6.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.report.clus6.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus6.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus6.341.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus6.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus6.340.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus6.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus6.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.report.clus6.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.report.clus6.292.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus6.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus6.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus6.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus6.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.report.clus6.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus6.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus6.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus6.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.report.clus6.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.report.clus6.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.report.clus6.343.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus6.310.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus6.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus6.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus6.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus6.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus6.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.report.clus6.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.report.clus6.334.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.report.clus6.306.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus6.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.report.clus6.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus6.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus6.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.report.clus6.329.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus6.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus6.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.report.clus6.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus6.311.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus6.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.report.clus6.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.report.clus6.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus6.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus6.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.report.clus6.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.report.clus6.349.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.report.clus6.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.report.clus6.321.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus6.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus6.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.report.clus6.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus6.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus6.345.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus6.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.report.clus6.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus6.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus6.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus6.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.report.clus6.324.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus6.303.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus6.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus6.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus6.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.report.clus6.330.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.report.clus3.164.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.report.clus3.282.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.report.clus3.189.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.report.clus3.162.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.report.clus3.200.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.report.clus3.131.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.report.clus3.170.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.report.clus3.96.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.report.clus3.91.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.report.clus3.235.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.report.clus3.171.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus3.87.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus3.118.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.report.clus3.169.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.report.clus3.149.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.report.clus3.243.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.report.clus3.213.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.report.clus3.254.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.report.clus3.133.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.report.clus3.257.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.report.clus3.252.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.report.clus3.181.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.report.clus3.157.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.report.clus3.182.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus3.210.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.report.clus3.153.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.report.clus3.215.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.report.clus3.152.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.report.clus3.220.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.report.clus3.172.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.report.clus3.183.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.report.clus3.285.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.report.clus3.238.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.report.clus3.78.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.report.clus3.229.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.report.clus3.98.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.report.clus3.92.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.report.clus3.194.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.report.clus3.267.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.report.clus3.225.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.report.clus3.89.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.report.clus3.139.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.report.clus3.180.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.report.clus3.72.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.report.clus3.107.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.report.clus3.279.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.report.clus3.261.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.report.clus3.168.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.report.clus3.106.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.report.clus3.112.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.report.clus3.86.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.report.clus3.85.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus3.145.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus3.174.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.report.clus3.73.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.report.clus3.224.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus3.202.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.report.clus3.138.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus3.161.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus3.201.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.report.clus3.192.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.report.clus3.227.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus3.268.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.report.clus3.281.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.report.clus3.76.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.report.clus3.190.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.report.clus3.129.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.report.clus3.158.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.report.clus3.184.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.report.clus3.197.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.report.clus3.269.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.report.clus3.116.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.report.clus3.126.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.report.clus3.74.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.report.clus3.95.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.report.clus3.206.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.report.clus3.212.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.report.clus3.150.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.report.clus3.276.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.report.clus3.177.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.report.clus3.102.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.report.clus3.155.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.report.clus3.209.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.report.clus3.193.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.report.clus3.147.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.report.clus3.154.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.report.clus3.108.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.report.clus3.178.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.report.clus3.166.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.report.clus3.256.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.report.clus3.84.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus3.179.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.report.clus3.111.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.report.clus3.196.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.report.clus3.230.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.report.clus3.247.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.report.clus3.222.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.report.clus3.275.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.report.clus3.218.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.report.clus3.114.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.report.clus3.216.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.report.clus3.266.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.report.clus3.143.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.report.clus3.244.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.report.clus3.236.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.report.clus3.265.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.report.clus3.250.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.report.clus3.262.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.report.clus3.176.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.report.clus3.232.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.report.clus3.93.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus3.186.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.report.clus3.240.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.report.clus3.237.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.report.clus3.80.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.report.clus3.151.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.report.clus3.242.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.report.clus3.274.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.report.clus3.104.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.report.clus3.113.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.report.clus3.110.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.report.clus3.159.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.report.clus3.77.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.report.clus3.99.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.report.clus3.233.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.report.clus3.277.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus3.135.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.report.clus3.191.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus3.273.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.report.clus3.137.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.report.clus3.75.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.report.clus3.203.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.report.clus3.128.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.report.clus3.253.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.report.clus3.286.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.report.clus3.246.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.report.clus3.234.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.report.clus3.173.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.report.clus3.146.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.report.clus3.141.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.report.clus3.130.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.report.clus3.101.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.report.clus3.255.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.report.clus3.199.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.report.clus3.228.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.report.clus3.142.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.report.clus3.94.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.report.clus3.259.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.report.clus3.271.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus3.264.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.report.clus3.198.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus3.287.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.report.clus3.120.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.report.clus3.148.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.report.clus3.185.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.report.clus3.100.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.report.clus3.140.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus3.81.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.report.clus3.167.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.report.clus3.205.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.report.clus3.231.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.report.clus3.156.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.report.clus3.272.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.report.clus3.187.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.report.clus3.103.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.report.clus3.160.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.report.clus3.82.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.report.clus3.258.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.report.clus3.195.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.report.clus3.109.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.report.clus3.123.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.report.clus3.241.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.report.clus3.284.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.report.clus3.283.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.report.clus3.211.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.report.clus3.127.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus3.105.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus3.188.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.report.clus3.144.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.report.clus3.263.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.report.clus3.239.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.report.clus3.217.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.report.clus3.221.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.report.clus3.249.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.report.clus3.204.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.report.clus3.278.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.report.clus3.270.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.report.clus3.88.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.report.clus3.83.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.report.clus3.136.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.report.clus3.165.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.report.clus3.207.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.report.clus3.219.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.report.clus3.117.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.report.clus3.134.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.report.clus3.226.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.report.clus3.90.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.report.clus3.208.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.report.clus3.132.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.report.clus3.248.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.report.clus3.122.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.report.clus3.79.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.report.clus3.124.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.report.clus3.251.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.report.clus3.119.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.report.clus3.121.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.report.clus3.214.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.report.clus3.245.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.report.clus3.280.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.report.clus3.223.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.report.clus3.97.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.report.clus3.115.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.report.clus3.260.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus3.175.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.report.clus3.163.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.report.clus3.125.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus7.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus7.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus7.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.NON.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus7.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus7.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus7.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus7.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus7.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus7.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus7.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus7.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.clus7.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus7.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus7.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus7.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus7.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus7.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus7.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus7.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.volcano_plot.clus7.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus7.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.NON.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus7.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.clus7.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus7.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus7.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus7.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.clus7.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus7.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus7.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus7.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus7.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus7.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus7.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus7.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus7.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus7.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus7.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus7.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus7.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus7.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus7.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus7.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus7.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus7.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus7.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus7.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus7.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus7.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.volcano_plot.NON.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus7.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.clus7.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus7.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus7.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus7.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus7.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus7.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus7.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus7.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus7.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus7.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus7.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus7.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus7.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus7.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus7.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus7.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.volcano_plot.clus7.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus7.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus7.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus7.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus7.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.volcano_plot.NON.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus7.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus7.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus7.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus7.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus7.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.NON.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus7.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus7.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus7.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus7.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus7.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus7.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus7.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.clus7.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus7.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus7.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus7.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus7.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus7.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus7.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus7.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus7.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus7.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus7.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.clus7.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus7.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.NON.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus7.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus7.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus7.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus7.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.volcano_plot.clus7.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus7.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus7.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.heatmap_plot.clus7.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus7.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus7.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.clus7.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus7.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus7.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus7.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus7.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus7.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus7.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus7.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus7.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus7.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.clus7.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus7.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus7.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus7.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus7.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus7.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus7.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus7.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.clus7.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus7.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus7.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus7.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus7.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus7.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus7.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus7.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.volcano_plot.clus7.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.clus7.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus7.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus7.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus7.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus7.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus7.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus7.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus7.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.heatmap_plot.NON.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus7.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus7.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus7.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus7.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus7.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus7.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus7.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus7.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus7.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus7.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus7.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus7.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.NON.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.heatmap_plot.clus7.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus7.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus7.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus7.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.clus7.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus7.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus7.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus7.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus7.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus7.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.volcano_plot.clus7.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus7.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus7.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus7.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus7.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus7.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus7.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.heatmap_plot.clus7.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus7.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus7.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus7.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus7.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus7.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus7.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus7.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus7.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.clus7.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus7.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.clus7.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus7.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus7.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus7.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus7.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus7.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.clus7.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus7.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus7.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus7.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus7.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus7.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus7.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus7.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus7.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.NON.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus7.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus7.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.volcano_plot.NON.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus7.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus7.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.volcano_plot.clus7.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus7.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.clus7.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus7.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus7.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus7.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus7.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.heatmap_plot.clus7.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus7.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus7.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus7.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus7.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus7.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus7.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus7.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus7.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus7.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus7.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus7.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.heatmap_plot.NON.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.clus7.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus7.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus7.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus7.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus7.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus7.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus7.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus7.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus7.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus7.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus7.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus7.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.clus7.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus7.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus7.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus7.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus7.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.clus7.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.clus7.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus7.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus7.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.clus7.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus7.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus7.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus7.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus7.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus7.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus7.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.heatmap_plot.NON.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus7.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus7.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus7.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus7.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus7.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus7.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus7.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus7.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus7.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus7.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus7.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus7.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus7.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus7.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus7.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus7.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus7.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus7.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus7.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus7.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus7.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus7.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus7.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus7.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus7.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus7.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.heatmap_plot.clus7.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus7.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.clus7.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus7.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus7.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus7.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus7.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus7.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus7.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus7.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus7.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.volcano_plot.clus7.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus7.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus7.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.clus7.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus7.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus7.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.NON.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.NON.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus7.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.NON.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus7.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus7.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus7.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus7.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus7.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus7.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus7.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.heatmap_plot.clus7.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus7.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus7.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus7.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus7.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus7.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus7.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus7.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus7.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus7.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus7.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus7.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus7.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus7.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus7.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.heatmap_plot.NON.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus7.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus7.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus7.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus7.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus7.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus7.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus7.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus7.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.clus7.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.clus7.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus7.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus7.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus7.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.clus7.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus7.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus7.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus7.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus7.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus7.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus7.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus7.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus7.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus7.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus7.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus7.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.volcano_plot.NON.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus7.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus7.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.clus7.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus7.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus7.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus7.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus7.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus7.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus7.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus7.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus7.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus7.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus7.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus7.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus7.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus7.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus7.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus7.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus7.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus7.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus7.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus7.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus7.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus7.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus7.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus7.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus7.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus7.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus7.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus7.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus7.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.clus7.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus7.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus7.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus7.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus7.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus7.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus7.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus7.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus7.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus7.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus7.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus7.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.NON.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus7.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus7.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus7.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus7.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus7.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.heatmap_plot.clus7.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus7.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.clus7.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.volcano_plot.clus7.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus7.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus7.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.NON.clus7.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus7.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus7.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus7.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus7.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus7.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus7.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus7.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus7.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus7.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus7.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus7.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus7.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus7.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus7.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.clus7.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus7.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus7.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus7.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus7.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus7.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus7.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus7.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus7.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus7.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus7.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus7.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus7.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus7.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus7.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus7.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.clus7.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus7.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.volcano_plot.clus7.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus7.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.NON.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.NON.clus7.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus7.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus7.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus7.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.clus7.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus7.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus7.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus7.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus7.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus7.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus7.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus7.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.clus7.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus7.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.NON.clus7.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus7.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus7.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus7.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus7.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus7.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus7.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus7.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus7.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus7.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.clus7.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.heatmap_plot.clus7.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus7.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus7.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus7.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus7.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.clus7.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus2.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus2.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus2.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.volcano_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus2.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus2.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus2.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus2.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus2.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.clus2.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus2.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus2.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.clus2.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus2.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus6.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus6.331.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.clus6.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus6.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus6.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus6.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus6.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus6.316.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.NON.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus6.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus6.323.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus6.332.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus6.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus6.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus6.324.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus6.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus6.317.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus6.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus6.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus6.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.heatmap_plot.clus6.330.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus6.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus6.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus6.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.volcano_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus6.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.clus6.299.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus6.345.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus6.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus6.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus6.327.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus6.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus6.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus6.310.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus6.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus6.335.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus6.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus6.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus6.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus6.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus6.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus6.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus6.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus6.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus6.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus6.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus6.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus6.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus6.350.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus6.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus6.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus6.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus6.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus6.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus6.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus6.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus6.325.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus6.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus6.308.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus6.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus6.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus6.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus6.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus6.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus6.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus6.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.heatmap_plot.clus6.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus6.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus6.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus6.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus6.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus6.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus6.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.heatmap_plot.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus6.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus6.320.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus6.309.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.volcano_plot.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus6.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus6.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus6.346.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.319.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus6.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus6.346.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.heatmap_plot.clus6.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus6.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus6.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus6.296.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus6.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.clus6.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus6.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus6.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus6.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus6.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus6.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus6.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus6.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus6.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus6.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus6.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus6.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus6.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus6.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus6.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus6.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.volcano_plot.clus6.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus6.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus6.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus6.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus6.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus6.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus6.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus6.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus6.313.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus6.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus6.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus6.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus6.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus6.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus6.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus6.333.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus6.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus6.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus6.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus6.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.heatmap_plot.clus6.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus6.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus6.321.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus6.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus6.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus6.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus6.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus6.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus6.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus6.339.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus6.347.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus6.317.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus6.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus6.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus6.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus6.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus6.341.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus6.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus6.340.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus6.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus6.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus6.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.NON.clus6.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus6.300.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus6.314.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus6.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus6.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus6.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus6.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus6.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus6.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus6.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus6.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus6.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus6.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus6.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus6.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus6.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus6.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus6.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus6.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus6.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus6.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus6.334.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus6.326.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus6.350.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus6.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus6.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus6.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus6.335.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus6.345.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus6.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus6.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus6.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.312.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus6.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus6.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus6.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus6.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus6.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus6.342.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus6.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus6.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus6.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus6.332.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus6.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus6.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus6.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus6.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.307.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus6.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus6.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus6.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus6.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus6.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus6.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus6.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus6.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus6.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus6.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus6.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus6.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus6.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus6.347.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.NON.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus6.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus6.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus6.348.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus6.304.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus6.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus6.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus6.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus6.348.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus6.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus6.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.heatmap_plot.clus6.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus6.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus6.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus6.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus6.341.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus6.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.volcano_plot.clus6.349.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus6.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus6.344.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus6.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.clus6.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus6.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus6.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus6.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus6.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus6.324.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus6.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus6.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus6.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus6.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus6.342.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus6.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus6.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus6.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus6.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus6.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.clus6.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus6.340.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus6.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus6.292.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus6.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus6.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus6.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus6.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus6.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus6.338.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus6.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus6.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.volcano_plot.clus6.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus6.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.315.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus6.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus6.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus6.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus6.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus6.310.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus6.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus6.333.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus6.306.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.volcano_plot.clus6.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus6.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus6.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus6.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus6.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus6.294.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus6.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus6.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus6.304.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus6.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus6.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus6.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus6.305.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus6.327.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus6.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus6.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus6.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus6.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus6.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus6.334.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus6.303.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus6.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus6.326.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus6.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus6.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus6.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus6.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus6.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus6.288.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus6.322.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus6.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus6.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.clus6.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus6.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus6.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus6.329.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus6.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus6.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus6.321.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus6.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus6.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus6.328.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus6.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus6.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus6.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus6.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus6.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus6.291.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus6.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus6.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus6.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus6.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus6.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus6.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus6.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus6.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus6.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus6.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus6.339.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus6.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus6.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus6.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus6.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.NON.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus6.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus6.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus6.336.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus6.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus6.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus6.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus6.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus6.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus6.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus6.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus6.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus6.290.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus6.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus6.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus6.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus6.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus6.308.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus6.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus6.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus6.337.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus6.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus6.331.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus6.311.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus6.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus6.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus6.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus6.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus6.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus6.289.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus6.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus6.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus6.328.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus6.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus6.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus6.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus6.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus6.306.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus6.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus6.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus6.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus6.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus6.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus6.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus6.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus6.305.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus6.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus6.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus6.298.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus6.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus6.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus6.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.319.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus6.318.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus6.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus6.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus6.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus6.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus6.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus6.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus6.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus6.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus6.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus6.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus6.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.volcano_plot.clus6.330.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus6.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus6.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus6.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus6.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus6.316.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.volcano_plot.clus6.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus6.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus6.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus6.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus6.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus6.318.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus6.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus6.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus6.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus6.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus6.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus6.301.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus6.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus6.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus6.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus6.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus6.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus6.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus6.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus6.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus6.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus6.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus6.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus6.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus6.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus6.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus6.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus6.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus6.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus6.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus6.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus6.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.volcano_plot.clus6.297.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus6.320.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus6.322.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus6.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus6.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus6.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus6.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus6.309.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus6.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus6.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus6.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus6.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus6.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus6.337.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus6.313.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus6.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus6.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus6.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus6.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.NON.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus6.295.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.302.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus6.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus6.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus6.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.307.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus6.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus6.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus6.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus6.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus6.338.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus6.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus6.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus6.325.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus6.344.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus6.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus6.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.315.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus6.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus6.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus6.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus6.336.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus6.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus6.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus6.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus6.329.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus6.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus6.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus6.293.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus6.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus6.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus6.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus6.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus6.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus6.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus6.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus6.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus6.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus6.343.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus6.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus6.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus6.323.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus6.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus6.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus6.314.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus6.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus6.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus6.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.NON.clus6.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.heatmap_plot.clus6.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus6.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus6.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus6.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus6.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus6.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus6.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus6.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus6.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus6.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus6.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus6.311.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus6.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus6.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus6.343.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus6.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus6.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus6.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus3.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus3.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus3.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus3.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.NON.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus3.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.heatmap_plot.NON.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus3.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus3.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus3.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.NON.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.heatmap_plot.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.volcano_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus3.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus3.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus3.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus3.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus3.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus3.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.volcano_plot.clus3.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus3.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus3.177.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus3.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus3.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.heatmap_plot.NON.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.clus3.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.heatmap_plot.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus3.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus3.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.heatmap_plot.clus3.169.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus3.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.heatmap_plot.clus3.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus3.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus3.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus3.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus3.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus3.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus3.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus3.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.NON.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus3.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus3.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus3.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus3.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.volcano_plot.clus3.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus3.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.NON.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus3.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus3.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus3.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus3.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus3.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus3.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus3.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus3.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus3.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus3.201.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus3.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus3.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus3.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.volcano_plot.clus3.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus3.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus3.216.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus3.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus3.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus3.265.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus3.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus3.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus3.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.NON.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus3.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.NON.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus3.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.heatmap_plot.clus3.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus3.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus3.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus3.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus3.222.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus3.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.volcano_plot.NON.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.NON.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus3.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus3.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus3.184.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus3.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus3.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus3.158.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus3.144.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus3.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus3.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus3.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus3.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus3.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus3.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus3.237.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus3.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus3.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus3.176.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus3.224.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus3.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus3.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus3.246.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.clus3.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus3.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus3.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.volcano_plot.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus3.164.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus3.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus3.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.NON.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus3.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.volcano_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus3.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus3.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus3.197.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus3.174.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus3.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus3.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus3.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus3.251.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus3.167.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus3.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus3.145.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus3.280.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus3.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus3.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus3.266.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus3.193.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus3.150.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus3.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.NON.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus3.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus3.227.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus3.157.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.heatmap_plot.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus3.191.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus3.156.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus3.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.NON.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus3.165.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus3.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus3.200.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus3.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus3.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus3.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus3.137.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus3.173.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus3.220.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.volcano_plot.clus3.160.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus3.219.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus3.189.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus3.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus3.148.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus3.162.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus3.154.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus3.242.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus3.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus3.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus3.129.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.NON.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus3.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus3.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus3.187.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus3.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus3.171.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus3.253.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus3.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus3.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.NON.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus3.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus3.147.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus3.175.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus3.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.volcano_plot.clus3.245.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus3.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus3.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus3.142.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus3.213.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus3.127.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus3.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus3.270.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.NON.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus3.181.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus3.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus3.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus3.271.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.281.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.heatmap_plot.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.199.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus3.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.clus3.249.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus3.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus3.261.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus3.180.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus3.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus3.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus3.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus3.232.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.volcano_plot.NON.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.heatmap_plot.NON.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus3.231.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus3.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.NON.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus3.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus3.255.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus3.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus3.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus3.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus3.287.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus3.149.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus3.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus3.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus3.163.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.NON.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.heatmap_plot.clus3.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus3.188.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus3.264.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus3.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus3.269.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus3.161.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus3.159.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus3.170.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus3.128.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus3.185.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.heatmap_plot.clus3.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus3.233.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus3.225.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus3.221.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus3.135.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus3.283.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus3.256.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus3.178.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus3.172.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus3.194.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus3.241.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus3.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.volcano_plot.clus3.257.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus3.267.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.volcano_plot.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus3.226.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus3.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus3.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus3.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus3.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus3.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus3.208.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus3.134.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus3.248.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus3.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus3.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus3.214.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus3.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus3.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus3.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus3.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus3.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus3.259.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus3.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus3.273.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus3.141.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.NON.clus3.125.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus3.206.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus3.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.clus3.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus3.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus3.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus3.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus3.186.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus3.183.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus3.153.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus3.152.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus3.252.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus3.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus3.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus3.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus3.244.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus3.151.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus3.282.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus3.276.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus3.131.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.volcano_plot.NON.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus3.192.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus3.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.247.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.NON.clus3.130.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus3.215.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus3.217.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus3.229.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus3.207.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus3.138.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus3.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus3.182.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus3.258.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.heatmap_plot.clus3.223.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus3.209.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.clus3.284.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus3.123.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus3.146.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus3.210.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.volcano_plot.clus3.203.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus3.166.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus3.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus3.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.clus3.278.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus3.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus3.195.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus3.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus3.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus3.236.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus3.235.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus3.126.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus3.277.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus3.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus3.268.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus3.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus3.230.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus3.285.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus3.274.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus3.190.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus3.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus3.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus3.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus3.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus3.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus3.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus3.218.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.NON.clus3.136.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus3.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.volcano_plot.clus3.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus3.279.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus3.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus3.275.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus3.260.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus3.263.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus3.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus3.262.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus3.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus3.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus3.240.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus3.212.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus3.132.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus3.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus3.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.heatmap_plot.clus3.143.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus3.124.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus3.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.clus3.139.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus3.196.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus3.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus3.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus3.204.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus3.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus3.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus3.243.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus3.228.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus3.250.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus3.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus3.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus3.155.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus3.286.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus3.254.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus3.133.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus3.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus3.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.179.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus3.272.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus3.239.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus3.238.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus3.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus3.205.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus3.168.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus3.140.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus3.211.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus3.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_CARM_ER_PATHWAY.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus7.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.clus7.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus7.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus7.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.heatmap_plot.clus7.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus7.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.clus7.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus7.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus7.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus7.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.heatmap_plot.clus7.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus7.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus7.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus7.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.heatmap_plot.clus7.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus7.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus7.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus7.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus7.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus7.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.volcano_plot.clus7.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus7.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.heatmap_plot.clus7.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus7.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus7.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus7.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus7.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus7.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.heatmap_plot.NON.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus7.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus7.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus7.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus7.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus7.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.heatmap_plot.clus7.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus7.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.clus7.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus7.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus7.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus7.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus7.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus7.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.heatmap_plot.clus7.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus7.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus7.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus7.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus7.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.clus7.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus7.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus7.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus7.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus7.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus7.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_KERATIN_METABOLISM.volcano_plot.NON.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus7.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.volcano_plot.clus7.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.volcano_plot.clus7.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus7.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.volcano_plot.clus7.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL1R_PATHWAY.volcano_plot.clus7.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.heatmap_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.heatmap_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus7.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PURINE_METABOLISM.heatmap_plot.clus7.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus7.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.heatmap_plot.clus7.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus7.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus7.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus7.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus7.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus7.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.heatmap_plot.clus7.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus7.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.clus7.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus7.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.NON.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus7.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus7.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus7.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus7.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.heatmap_plot.clus7.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus7.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.clus7.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus7.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus7.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.volcano_plot.clus7.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.heatmap_plot.NON.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus7.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus7.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus7.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.clus7.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus7.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus7.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus7.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_PI3KPATHWAY.volcano_plot.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus7.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus7.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus7.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus7.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus7.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus7.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus7.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus7.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus7.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus7.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.NON.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus7.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus7.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus7.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus7.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus7.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus7.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus7.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus7.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus7.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus7.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus7.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus7.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus7.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus7.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus7.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus7.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus7.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.heatmap_plot.clus7.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus7.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.NON.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.volcano_plot.clus7.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.volcano_plot.clus7.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus7.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus7.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus7.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus7.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FAS_PATHWAY.heatmap_plot.clus7.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus7.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL1_SIGNALING.heatmap_plot.clus7.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.NON.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus7.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus7.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus7.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.heatmap_plot.NON.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus7.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus7.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus7.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus7.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus7.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus7.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus7.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus7.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus7.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.NON.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus7.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus7.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL1PATHWAY.heatmap_plot.clus7.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.heatmap_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.heatmap_plot.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus7.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus7.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus7.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus7.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus7.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus7.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus7.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus7.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_I_DIABETES_MELLITUS.volcano_plot.clus7.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus7.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus7.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus7.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.clus7.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus7.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM.volcano_plot.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus7.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus7.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus7.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus7.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.clus7.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.heatmap_plot.NON.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus7.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus7.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.heatmap_plot.clus7.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus7.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus7.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus7.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PKB_MEDIATED_EVENTS.volcano_plot.NON.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus7.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus7.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.clus7.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus7.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus7.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.volcano_plot.clus7.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus7.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus7.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus7.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus7.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus7.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FMLP_PATHWAY.volcano_plot.clus7.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus7.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus7.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus7.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus7.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus7.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.volcano_plot.clus7.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus7.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.volcano_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus7.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus7.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus7.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus7.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus7.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SMAD2_3NUCLEARPATHWAY.heatmap_plot.clus7.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus7.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus7.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus7.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus7.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.clus7.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.clus7.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus7.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus7.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus7.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus7.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus7.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus7.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.clus7.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.volcano_plot.clus7.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus7.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.volcano_plot.clus7.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus7.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus7.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.heatmap_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus7.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus7.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus7.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus7.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus7.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus7.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus7.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus7.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus7.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus7.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.NON.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus7.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TNFR1_PATHWAY.heatmap_plot.clus7.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_CHREBP2_PATHWAY.volcano_plot.NON.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus7.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus7.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus7.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus7.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.clus7.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus7.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.volcano_plot.clus7.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus7.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.volcano_plot.clus7.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus7.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_ALPHA_BETA_SIGNALING.heatmap_plot.clus7.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus7.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus7.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus7.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TRYPTOPHAN_METABOLISM.volcano_plot.clus7.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.volcano_plot.clus7.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus7.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus7.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus7.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus7.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus7.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus7.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus7.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus7.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus7.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.heatmap_plot.NON.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus7.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus7.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus7.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus7.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus7.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus7.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus7.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.NON.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus7.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus7.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus7.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus7.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus7.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.NON.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus7.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus7.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus7.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus7.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.clus7.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus7.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus7.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus7.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.heatmap_plot.NON.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus7.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus7.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_KERATAN_SULFATE_BIOSYNTHESIS.volcano_plot.NON.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus7.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus7.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus7.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_EPHRINBREVPATHWAY.heatmap_plot.clus7.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus7.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus7.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus7.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus7.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus7.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus7.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus7.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus7.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus7.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_FAS_SIGNALING_PATHWAY.heatmap_plot.clus7.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus7.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.NON.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus7.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus7.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HIVNEFPATHWAY.volcano_plot.clus7.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus7.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus7.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus7.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus7.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus7.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus7.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus7.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.clus7.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus7.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_STAT5PATHWAY.heatmap_plot.clus7.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus7.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus7.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus7.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.volcano_plot.clus7.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus7.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus7.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus7.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus7.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus7.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus7.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus7.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus7.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus7.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_STARCH_AND_SUCROSE_METABOLISM.volcano_plot.NON.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus7.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus7.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus7.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.clus7.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus7.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus7.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus7.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus7.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus7.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus7.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus7.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus7.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus7.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus7.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus7.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus7.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.NON.clus7.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.heatmap_plot.clus7.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus7.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus7.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus7.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus7.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.clus7.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus7.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus7.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus7.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_STAT4PATHWAY.volcano_plot.clus7.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus7.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus7.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus7.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus7.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus7.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus7.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus7.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.clus7.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus7.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY.heatmap_plot.clus7.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY.volcano_plot.clus7.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus7.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus7.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus7.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus7.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus7.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus7.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_INFLAM_PATHWAY.heatmap_plot.clus7.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.clus7.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus7.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus7.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus7.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus7.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus7.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus7.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus7.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus7.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus7.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus7.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus7.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus7.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus7.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus7.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus7.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_SIGNALING.heatmap_plot.clus7.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus7.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.clus7.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus7.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.NON.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus7.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus7.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus7.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus7.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus7.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_RAC1_PATHWAY.volcano_plot.clus7.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.NON.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus7.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTERFERON_GAMMA_SIGNALING.volcano_plot.clus7.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NKT_PATHWAY.volcano_plot.clus7.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus7.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus7.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus7.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus7.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus7.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus7.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus7.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus7.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus7.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus7.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus7.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus7.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus7.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FOXOPATHWAY.volcano_plot.clus7.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus7.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus7.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus7.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus7.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus7.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.clus7.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus7.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.clus7.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.NON.clus7.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus7.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus7.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus7.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus7.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.clus7.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus7.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus7.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus7.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL.heatmap_plot.clus7.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus7.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus7.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus7.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.heatmap_plot.NON.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus7.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus7.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus7.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus7.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING.volcano_plot.clus7.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus7.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus7.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus7.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus7.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus7.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus7.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_HIVNEF_PATHWAY.volcano_plot.clus7.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus7.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus7.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_STRESS_PATHWAY.volcano_plot.clus7.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus7.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus7.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NECTIN_PATHWAY.volcano_plot.NON.clus7.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_GRAFT_VERSUS_HOST_DISEASE.heatmap_plot.clus7.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus7.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus7.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus7.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus7.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus7.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus7.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus7.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_CASPASE_PATHWAY.heatmap_plot.clus7.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus7.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus7.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus7.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus7.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus7.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus7.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus7.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus7.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus7.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_IRON_UPTAKE_AND_TRANSPORT.volcano_plot.NON.clus7.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.clus7.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus7.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus7.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus7.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus7.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.clus7.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NOD1_2_SIGNALING_PATHWAY.volcano_plot.clus7.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.clus7.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.NON.clus7.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus7.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus7.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus7.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BLADDER_CANCER.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLYCOSPHINGOLIPID_METABOLISM.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_CERAMIDE_PATHWAY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.heatmap_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus2.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.clus2.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus2.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus2.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.volcano_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus2.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.clus2.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus2.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_DE_NOVO_BIOSYNTHESIS.volcano_plot.clus2.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.clus2.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus2.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN3_PATHWAY.heatmap_plot.clus2.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.clus2.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus2.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.clus2.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus2.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.clus2.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.volcano_plot.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.volcano_plot.clus6.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.clus6.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.volcano_plot.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus6.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus6.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.volcano_plot.clus6.325.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.volcano_plot.clus6.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.heatmap_plot.clus6.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.heatmap_plot.clus6.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus6.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.heatmap_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.volcano_plot.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus6.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus6.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus6.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus6.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus6.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.heatmap_plot.clus6.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.clus6.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus6.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS.heatmap_plot.clus6.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.clus6.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus6.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.heatmap_plot.clus6.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus6.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus6.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus6.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus6.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.volcano_plot.clus6.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus6.341.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.319.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus6.345.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus6.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus6.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus6.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus6.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus6.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.heatmap_plot.clus6.305.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus6.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus6.317.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.heatmap_plot.clus6.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus6.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus6.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.heatmap_plot.clus6.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.heatmap_plot.NON.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus6.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.volcano_plot.clus6.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus6.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus6.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus6.314.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus6.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS.volcano_plot.NON.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus6.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.heatmap_plot.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus6.350.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.heatmap_plot.clus6.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus6.320.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.heatmap_plot.clus6.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNAL_AMPLIFICATION.volcano_plot.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus6.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.volcano_plot.clus6.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.heatmap_plot.clus6.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus6.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.volcano_plot.clus6.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus6.342.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.heatmap_plot.clus6.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus6.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.volcano_plot.clus6.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION.volcano_plot.clus6.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus6.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus6.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus6.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus6.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.heatmap_plot.clus6.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus6.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus6.337.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.volcano_plot.clus6.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus6.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus6.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus6.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus6.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus6.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus6.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus6.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.heatmap_plot.clus6.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus6.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus6.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.clus6.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus6.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus6.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus6.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.volcano_plot.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.heatmap_plot.clus6.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.heatmap_plot.clus6.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus6.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus6.301.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus6.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.NON.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus6.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus6.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus6.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus6.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus6.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR1_PATHWAY.heatmap_plot.clus6.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.heatmap_plot.clus6.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus6.331.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus6.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus6.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus6.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus6.347.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus6.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus6.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.volcano_plot.clus6.330.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus6.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus6.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.heatmap_plot.clus6.338.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus6.335.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.clus6.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.volcano_plot.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus6.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.heatmap_plot.clus6.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.volcano_plot.clus6.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.volcano_plot.clus6.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus6.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus6.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus6.340.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus6.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus6.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus6.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus6.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_B_CELL_ANTIGEN_RECEPTOR.volcano_plot.clus6.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus6.339.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHA_FWDPATHWAY.heatmap_plot.clus6.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR4_PATHWAY.heatmap_plot.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.heatmap_plot.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.heatmap_plot.clus6.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus6.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.heatmap_plot.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.clus6.327.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus6.310.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus6.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus6.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.volcano_plot.clus6.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus6.322.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.volcano_plot.NON.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAP_KINASE_ACTIVATION_IN_TLR_CASCADE.heatmap_plot.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.heatmap_plot.clus6.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.315.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus6.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus6.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus6.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BCR_5PATHWAY.volcano_plot.clus6.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_ADRENERGIC.volcano_plot.clus6.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.clus6.308.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus6.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.heatmap_plot.clus6.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.volcano_plot.clus6.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus6.322.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus6.346.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus6.344.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus6.336.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.volcano_plot.clus6.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.heatmap_plot.clus6.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus6.318.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GRANULE_CELL_SURVIVAL_PATHWAY.heatmap_plot.clus6.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.heatmap_plot.clus6.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus6.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus6.314.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.heatmap_plot.clus6.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus6.341.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.heatmap_plot.clus6.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FASPATHWAY.heatmap_plot.clus6.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus6.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus6.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.volcano_plot.clus6.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus6.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus6.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.volcano_plot.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus6.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus6.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.volcano_plot.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.heatmap_plot.clus6.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus6.318.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus6.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus6.340.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus6.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEMATOPOIETIC_CELL_LINEAGE.volcano_plot.clus6.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.volcano_plot.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus6.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus6.345.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_METABOLISM.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus6.311.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus6.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus6.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus6.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus6.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus6.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus6.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.heatmap_plot.clus6.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus6.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus6.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus6.346.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus6.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.volcano_plot.clus6.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus6.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus6.348.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.volcano_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.heatmap_plot.clus6.328.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus6.317.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRAIL_PATHWAY.heatmap_plot.clus6.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus6.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DIABETES_PATHWAYS.volcano_plot.clus6.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus6.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION.volcano_plot.clus6.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus6.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VEGF_SIGNALING_PATHWAY.heatmap_plot.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus6.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus6.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.heatmap_plot.clus6.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.volcano_plot.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus6.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus6.294.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus6.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.volcano_plot.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.volcano_plot.clus6.334.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus6.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AQUAPORIN_MEDIATED_TRANSPORT.heatmap_plot.clus6.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HES_HEYPATHWAY.heatmap_plot.clus6.330.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.heatmap_plot.clus6.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus6.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus6.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus6.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RHOA_REG_PATHWAY.heatmap_plot.clus6.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.clus6.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CARDIAC_MUSCLE_CONTRACTION.volcano_plot.clus6.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus6.316.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus6.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus6.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INNATE_IMMUNE_SYSTEM.volcano_plot.clus6.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.clus6.323.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus6.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus6.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.heatmap_plot.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus6.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus6.326.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL2_1PATHWAY.heatmap_plot.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_KITPATHWAY.volcano_plot.clus6.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus6.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus6.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus6.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus6.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus6.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus6.293.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus6.350.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus6.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus6.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus6.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus6.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus6.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus6.333.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSI_PATHWAY.heatmap_plot.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus6.332.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus6.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus6.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus6.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.clus6.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.heatmap_plot.clus6.309.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL4_2PATHWAY.volcano_plot.clus6.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.volcano_plot.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_MYOCYTE_AD_PATHWAY.heatmap_plot.clus6.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus6.304.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus6.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.volcano_plot.NON.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TNFPATHWAY.volcano_plot.clus6.309.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus6.326.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.clus6.329.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus6.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus6.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus6.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus6.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.319.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_REG_GR_PATHWAY.volcano_plot.clus6.338.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.NON.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus6.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus6.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN2_PATHWAY.volcano_plot.clus6.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus6.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.volcano_plot.clus6.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus6.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus6.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.volcano_plot.clus6.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus6.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STRIATED_MUSCLE_CONTRACTION.volcano_plot.clus6.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus6.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus6.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus6.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus6.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus6.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus6.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.heatmap_plot.clus6.321.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GSK3_PATHWAY.volcano_plot.clus6.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.volcano_plot.clus6.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus6.343.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus6.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus6.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.clus6.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus6.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus6.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_JAK_STAT_SIGNALING_PATHWAY.heatmap_plot.clus6.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.volcano_plot.clus6.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_NFAT_TFPATHWAY.heatmap_plot.clus6.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.clus6.329.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.clus6.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEMBRANE_TRAFFICKING.heatmap_plot.NON.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus6.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.heatmap_plot.clus6.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus6.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus6.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.heatmap_plot.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus6.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus6.331.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.heatmap_plot.clus6.306.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus6.300.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.volcano_plot.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus6.344.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_STEROID_HORMONES.heatmap_plot.clus6.292.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS.heatmap_plot.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus6.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus6.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus6.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus6.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.volcano_plot.clus6.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.315.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus6.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus6.304.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus6.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA1213_SIGNALLING_EVENTS.heatmap_plot.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus6.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus6.307.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.volcano_plot.clus6.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus6.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus6.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus6.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus6.295.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.NON.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.volcano_plot.clus6.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus6.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus6.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus6.313.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TOLL_PATHWAY.heatmap_plot.clus6.325.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.heatmap_plot.clus6.324.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_CARBOHYDRATES.volcano_plot.clus6.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.volcano_plot.clus6.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus6.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus6.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.volcano_plot.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM.heatmap_plot.clus6.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus6.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.clus6.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus6.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.clus6.299.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus6.288.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus6.320.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus6.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus6.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus6.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_DEATH_PATHWAY.heatmap_plot.clus6.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus6.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus6.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus6.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.volcano_plot.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.clus6.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION.heatmap_plot.clus6.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.307.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus6.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus6.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.312.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus6.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus6.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus6.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_THYROID_CANCER.heatmap_plot.clus6.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus6.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus6.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus6.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus6.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_AGGREGATION_PLUG_FORMATION.heatmap_plot.clus6.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus6.316.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus6.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.heatmap_plot.clus6.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CHEMOKINE_SIGNALING_PATHWAY.heatmap_plot.clus6.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus6.337.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus6.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TCR_SIGNALING.volcano_plot.clus6.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450.heatmap_plot.clus6.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus6.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus6.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAC1_REG_PATHWAY.heatmap_plot.clus6.296.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus6.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus6.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus6.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_I_SIGNALLING_EVENTS.heatmap_plot.clus6.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY.volcano_plot.clus6.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus6.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AP1_PATHWAY.volcano_plot.clus6.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.clus6.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P75_NTR_RECEPTOR_MEDIATED_SIGNALLING.heatmap_plot.clus6.291.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus6.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus6.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus6.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus6.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.volcano_plot.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.clus6.327.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_TCR_SIGNALING.volcano_plot.clus6.328.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCOSE_TRANSPORT.volcano_plot.clus6.321.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_PROTEIN_BETA_GAMMA_SIGNALLING.volcano_plot.clus6.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus6.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus6.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus6.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus6.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus6.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus6.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GMCSF_PATHWAY.volcano_plot.clus6.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.volcano_plot.clus6.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus6.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus6.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus6.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus6.347.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus6.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VIRAL_MYOCARDITIS.volcano_plot.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus6.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus6.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus6.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus6.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_GAQ_PATHWAY.heatmap_plot.clus6.297.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus6.332.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus6.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus6.342.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus6.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus6.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus6.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.heatmap_plot.clus6.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus6.339.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus6.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus6.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus6.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRPATHWAY.volcano_plot.clus6.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus6.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus6.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus6.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.clus6.290.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus6.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus6.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus6.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus6.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CXCR3PATHWAY.volcano_plot.clus6.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.heatmap_plot.clus6.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus6.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus6.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus6.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus6.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus6.298.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CMYB_PATHWAY.volcano_plot.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus6.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus6.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus6.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus6.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL.heatmap_plot.clus6.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_AMB2_NEUTROPHILS_PATHWAY.heatmap_plot.clus6.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus6.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.heatmap_plot.clus6.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus6.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus6.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus6.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus6.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_CD40PATHWAYMAP.volcano_plot.clus6.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus6.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.302.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus6.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL12_2PATHWAY.volcano_plot.clus6.324.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPVI_MEDIATED_ACTIVATION_CASCADE.volcano_plot.clus6.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus6.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.volcano_plot.clus6.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus6.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT.volcano_plot.clus6.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.heatmap_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus6.333.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus6.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus6.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus6.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_RHO_GTPASES.volcano_plot.clus6.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus6.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus6.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ILS.volcano_plot.clus6.306.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus6.313.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus6.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KCIAKTPATHWAY.volcano_plot.clus6.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus6.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus6.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.volcano_plot.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_LEISHMANIA_INFECTION.volcano_plot.clus6.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_APOPTOSIS.volcano_plot.clus6.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus6.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus6.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCR_PATHWAY.heatmap_plot.clus6.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS.heatmap_plot.NON.clus6.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus6.311.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus6.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_TUMOR_NECROSIS_FACTOR_PATHWAY.heatmap_plot.clus6.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTEGRIN_ALPHAIIB_BETA3_SIGNALING.heatmap_plot.clus6.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.NON.clus6.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus6.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_IL2RB_PATHWAY.heatmap_plot.clus6.334.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.clus6.308.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus6.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.clus6.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.clus6.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES.volcano_plot.clus6.305.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.clus6.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_TCRCALCIUMPATHWAY.volcano_plot.clus6.289.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus6.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARGININE_AND_PROLINE_METABOLISM.volcano_plot.clus6.349.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus6.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus6.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus6.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES.heatmap_plot.clus6.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_SCF_KIT.volcano_plot.clus6.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus6.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_TCR_PATHWAY.heatmap_plot.clus6.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus6.348.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TOLL_RECEPTOR_CASCADES.heatmap_plot.clus6.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus6.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus6.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus6.310.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus6.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROLIPID_METABOLISM.volcano_plot.clus6.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_CD8TCRDOWNSTREAMPATHWAY.volcano_plot.clus6.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HEMOSTASIS.heatmap_plot.clus6.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus6.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus6.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus6.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus6.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus6.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus6.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus6.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus6.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus6.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.clus6.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus6.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus6.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus6.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus6.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus6.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus6.336.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus6.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus6.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus6.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G_ALPHA_Z_SIGNALLING_EVENTS.heatmap_plot.clus6.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus6.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus6.343.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus6.303.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus6.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus6.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HIF1_TFPATHWAY.heatmap_plot.clus6.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_IL3_PATHWAY.heatmap_plot.clus6.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.clus6.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus6.335.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus6.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_VEGFR1_2_PATHWAY.volcano_plot.clus6.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.clus6.323.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus6.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus6.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus6.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERA_GENOMIC_PATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_LKB1_PATHWAY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HDAC_CLASSII_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_OTHER_ENZYMES.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.heatmap_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.heatmap_plot.clus3.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.volcano_plot.clus3.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.volcano_plot.clus3.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.clus3.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.volcano_plot.clus3.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.volcano_plot.clus3.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.volcano_plot.clus3.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.volcano_plot.clus3.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.clus3.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.heatmap_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.volcano_plot.clus3.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.heatmap_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.heatmap_plot.clus3.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.volcano_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus3.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.volcano_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.volcano_plot.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.volcano_plot.NON.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.volcano_plot.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.heatmap_plot.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.volcano_plot.clus3.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.volcano_plot.clus3.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.heatmap_plot.clus3.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.volcano_plot.clus3.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.clus3.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.heatmap_plot.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.volcano_plot.clus3.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE.volcano_plot.clus3.256.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus3.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.heatmap_plot.clus3.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.volcano_plot.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.volcano_plot.clus3.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.WNT_SIGNALING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.heatmap_plot.clus3.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.heatmap_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.volcano_plot.NON.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.heatmap_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.volcano_plot.clus3.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RENAL_CELL_CARCINOMA.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.heatmap_plot.clus3.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus3.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.volcano_plot.clus3.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.heatmap_plot.clus3.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.heatmap_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.clus3.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.volcano_plot.clus3.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.heatmap_plot.clus3.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.volcano_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.heatmap_plot.clus3.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.clus3.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.volcano_plot.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BCR_PATHWAY.heatmap_plot.clus3.262.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.volcano_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.heatmap_plot.clus3.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.heatmap_plot.clus3.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_L1CAM_INTERACTIONS.heatmap_plot.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COMPLEMENT_AND_COAGULATION_CASCADES.volcano_plot.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.NON.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.heatmap_plot.NON.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.volcano_plot.clus3.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_S_SIGNALLING_EVENTS.volcano_plot.clus3.185.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.heatmap_plot.clus3.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.heatmap_plot.clus3.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.heatmap_plot.clus3.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.volcano_plot.clus3.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.volcano_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.heatmap_plot.clus3.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.volcano_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.volcano_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.volcano_plot.clus3.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.heatmap_plot.NON.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.volcano_plot.clus3.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.heatmap_plot.clus3.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.volcano_plot.clus3.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.clus3.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FANCONI_PATHWAY.heatmap_plot.NON.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.heatmap_plot.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.volcano_plot.clus3.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.clus3.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.heatmap_plot.NON.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.heatmap_plot.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.heatmap_plot.clus3.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus3.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BMPPATHWAY.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.volcano_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.volcano_plot.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.heatmap_plot.clus3.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.volcano_plot.clus3.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.volcano_plot.clus3.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.volcano_plot.clus3.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FAK_PATHWAY.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.volcano_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.volcano_plot.clus3.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.heatmap_plot.NON.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.heatmap_plot.clus3.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.volcano_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.heatmap_plot.clus3.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.heatmap_plot.NON.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.volcano_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.clus3.200.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.volcano_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.volcano_plot.clus3.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.heatmap_plot.clus3.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.volcano_plot.clus3.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.clus3.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.heatmap_plot.clus3.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus3.188.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.volcano_plot.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.volcano_plot.clus3.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_STEROID_HORMONE_BIOSYNTHESIS.volcano_plot.clus3.251.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.volcano_plot.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.heatmap_plot.clus3.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.volcano_plot.clus3.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TXA2PATHWAY.volcano_plot.clus3.235.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.heatmap_plot.clus3.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus3.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PIP3_ACTIVATES_AKT_SIGNALING.heatmap_plot.clus3.212.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.volcano_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.NON.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.volcano_plot.clus3.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.volcano_plot.clus3.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.heatmap_plot.clus3.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COMPLEMENT_CASCADE.heatmap_plot.clus3.164.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.heatmap_plot.NON.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.volcano_plot.clus3.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OLFACTORY_TRANSDUCTION.volcano_plot.clus3.169.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.volcano_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.volcano_plot.clus3.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.volcano_plot.NON.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_HOMEOSTASIS.volcano_plot.clus3.207.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.NON.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.heatmap_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_CREB_PATHWAY.volcano_plot.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.heatmap_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION.heatmap_plot.clus3.171.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.volcano_plot.clus3.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.heatmap_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS.volcano_plot.clus3.272.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.heatmap_plot.clus3.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.heatmap_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.volcano_plot.clus3.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.volcano_plot.NON.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.heatmap_plot.clus3.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.volcano_plot.clus3.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_TRAFFICKINGPATHWAY.volcano_plot.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.heatmap_plot.clus3.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.volcano_plot.clus3.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.heatmap_plot.clus3.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.heatmap_plot.clus3.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.heatmap_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.volcano_plot.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DILATED_CARDIOMYOPATHY.heatmap_plot.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.clus3.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_PATHWAY.volcano_plot.clus3.147.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.volcano_plot.NON.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_CYCLE.volcano_plot.NON.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.volcano_plot.NON.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NEPHRIN_NEPH1_PATHWAY.heatmap_plot.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus3.174.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.clus3.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.volcano_plot.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION.volcano_plot.NON.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.heatmap_plot.clus3.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.heatmap_plot.clus3.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_DEATH_SIGNALLING_VIA_NRAGE_NRIF_AND_NADE.volcano_plot.clus3.231.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.heatmap_plot.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_OPIOID_SIGNALLING.heatmap_plot.clus3.258.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_EGFR_IN_CANCER.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.heatmap_plot.NON.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MYD88_MAL_CASCADE_INITIATED_ON_PLASMA_MEMBRANE.heatmap_plot.clus3.204.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.volcano_plot.clus3.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.heatmap_plot.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NFAT_3PATHWAY.volcano_plot.clus3.192.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_KERATINOCYTE_PATHWAY.heatmap_plot.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMA4D_IN_SEMAPHORIN_SIGNALING.heatmap_plot.clus3.211.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_KAINATE_RECEPTORS_UPON_GLUTAMATE_BINDING.volcano_plot.clus3.181.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.heatmap_plot.clus3.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.volcano_plot.clus3.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PLC_BETA_MEDIATED_EVENTS.heatmap_plot.clus3.232.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.volcano_plot.clus3.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.clus3.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.heatmap_plot.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.heatmap_plot.NON.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FRS2_MEDIATED_CASCADE.heatmap_plot.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.volcano_plot.clus3.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS.volcano_plot.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus3.287.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY.volcano_plot.clus3.172.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.heatmap_plot.clus3.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.NON.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.volcano_plot.clus3.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALLING_BY_NGF.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.heatmap_plot.clus3.180.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.volcano_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus3.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.heatmap_plot.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM.volcano_plot.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.volcano_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus3.137.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.volcano_plot.clus3.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.heatmap_plot.clus3.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.volcano_plot.clus3.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.volcano_plot.clus3.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_CD40_PATHWAY.heatmap_plot.clus3.254.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.clus3.148.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SPHINGOLIPID_METABOLISM.heatmap_plot.clus3.223.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_WNT_PATHWAY.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.clus3.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.heatmap_plot.NON.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.heatmap_plot.clus3.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.heatmap_plot.NON.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_JNK_MAPK_PATHWAY.heatmap_plot.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_COMMUNICATION.volcano_plot.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.volcano_plot.clus3.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.heatmap_plot.clus3.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNAL_TRANSDUCTION_BY_L1.heatmap_plot.clus3.208.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.heatmap_plot.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NETRIN1_SIGNALING.volcano_plot.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus3.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TELOMERASEPATHWAY.volcano_plot.NON.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES.heatmap_plot.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus3.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GNRH_SIGNALING_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.volcano_plot.clus3.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.volcano_plot.NON.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_A6B1_A6B4_INTEGRIN_PATHWAY.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MET_PATHWAY.volcano_plot.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.heatmap_plot.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.volcano_plot.clus3.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CIRCADIAN_CLOCK.heatmap_plot.clus3.189.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.heatmap_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_TF_PATHWAY.volcano_plot.clus3.157.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SEMAPHORIN_INTERACTIONS.heatmap_plot.clus3.265.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION.heatmap_plot.NON.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ECM_RECEPTOR_INTERACTION.volcano_plot.clus3.214.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLUCONEOGENESIS.heatmap_plot.NON.clus3.125.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.heatmap_plot.clus3.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.heatmap_plot.clus3.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.heatmap_plot.clus3.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.volcano_plot.clus3.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.volcano_plot.clus3.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.clus3.139.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_DEPRESSION.volcano_plot.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.heatmap_plot.clus3.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.volcano_plot.NON.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.volcano_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS.heatmap_plot.clus3.261.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CELL_ADHESION_MOLECULES_CAMS.heatmap_plot.clus3.227.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NFKB_AND_MAP_KINASES_ACTIVATION_MEDIATED_BY_TLR4_SIGNALING_REPERTOIRE.volcano_plot.clus3.213.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.179.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.heatmap_plot.clus3.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus3.145.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRATION_OF_ENERGY_METABOLISM.volcano_plot.clus3.194.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PYRIMIDINE_METABOLISM.volcano_plot.NON.clus3.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.heatmap_plot.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.heatmap_plot.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IGF1_PATHWAY.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRAF6_MEDIATED_INDUCTION_OF_NFKB_AND_MAP_KINASES_UPON_TLR7_8_OR_9_ACTIVATION.volcano_plot.clus3.233.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NITRIC_OXIDE_STIMULATES_GUANYLATE_CYCLASE.heatmap_plot.clus3.131.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.volcano_plot.NON.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FOXM1PATHWAY.volcano_plot.NON.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INSULIN_SIGNALING_PATHWAY.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB2.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_CASCADE.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VEGF_PATHWAY.heatmap_plot.clus3.238.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SHP2_PATHWAY.heatmap_plot.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_PHASE.volcano_plot.NON.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ACUTE_MYELOID_LEUKEMIA.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.volcano_plot.clus3.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DRUG_METABOLISM_CYTOCHROME_P450.volcano_plot.clus3.184.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus3.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HEDGEHOG_SIGNALING_PATHWAY.heatmap_plot.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.heatmap_plot.NON.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PATHWAYS_IN_CANCER.volcano_plot.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.heatmap_plot.clus3.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALZHEIMERS_DISEASE.heatmap_plot.clus3.245.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB2_SIGNALING.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.heatmap_plot.clus3.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.volcano_plot.NON.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.heatmap_plot.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.heatmap_plot.clus3.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus3.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MUSCLE_CONTRACTION.heatmap_plot.clus3.266.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus3.186.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.NON.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_WATER_BALANCE_BY_RENAL_AQUAPORINS.volcano_plot.clus3.241.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PI3KPLCTRKPATHWAY.heatmap_plot.clus3.193.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRIF_MEDIATED_TLR3_SIGNALING.volcano_plot.clus3.255.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES.heatmap_plot.NON.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus3.201.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_2_PATHWAY.volcano_plot.clus3.160.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RET_PATHWAY.heatmap_plot.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1.volcano_plot.clus3.259.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.heatmap_plot.NON.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.clus3.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.volcano_plot.NON.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS.heatmap_plot.clus3.263.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PPARA_PATHWAY.heatmap_plot.clus3.228.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ATR_PATHWAY.heatmap_plot.NON.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FOCAL_ADHESION.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus3.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_AKT_ACTIVATION.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.clus3.249.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.clus3.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_NONCANONICAL_PATHWAY.heatmap_plot.clus3.226.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CELL_JUNCTION_ORGANIZATION.heatmap_plot.clus3.136.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus3.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.volcano_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.heatmap_plot.clus3.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES.volcano_plot.NON.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_REGULATION_OF_ACTIN_CYTOSKELETON.volcano_plot.clus3.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.clus3.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.NON.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.heatmap_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.clus3.267.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS.volcano_plot.NON.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTEGRIN_SIGNALING_PATHWAY.heatmap_plot.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.volcano_plot.clus3.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNAL_TRANSDUCTION.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.heatmap_plot.clus3.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.volcano_plot.clus3.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION.heatmap_plot.clus3.203.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MAPK_PATHWAY.heatmap_plot.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOLYSIS.heatmap_plot.NON.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.volcano_plot.clus3.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.heatmap_plot.clus3.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_INSULIN_RECEPTOR.volcano_plot.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.clus3.282.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOLOGICAL_OXIDATIONS.volcano_plot.clus3.155.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_HDAC_PATHWAY.volcano_plot.clus3.270.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus3.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CALCIUM_SIGNALING_PATHWAY.volcano_plot.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION.volcano_plot.clus3.143.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus3.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.clus3.199.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS.volcano_plot.clus3.260.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION.volcano_plot.clus3.149.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus3.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS.heatmap_plot.clus3.229.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION.heatmap_plot.clus3.167.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ECADHERIN_STABILIZATION_PATHWAY.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ENDOCYTOSIS.heatmap_plot.clus3.173.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_FCER1_PATHWAY.volcano_plot.clus3.158.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BUTANOATE_METABOLISM.heatmap_plot.clus3.206.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.heatmap_plot.NON.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.NON.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PURINE_METABOLISM.volcano_plot.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM.heatmap_plot.NON.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus3.161.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FGF_PATHWAY.volcano_plot.clus3.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS.heatmap_plot.clus3.276.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.volcano_plot.clus3.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EGF_PATHWAY.volcano_plot.clus3.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALPHASYNUCLEIN_PATHWAY.volcano_plot.clus3.269.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus3.135.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLYCEROPHOSPHOLIPID_METABOLISM.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM.volcano_plot.NON.clus3.129.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_WNT_SIGNALING_PATHWAY.volcano_plot.clus3.247.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL.volcano_plot.clus3.178.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MAPK_SIGNALING_PATHWAY.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.volcano_plot.NON.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.volcano_plot.clus3.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_BASAL_CELL_CARCINOMA.volcano_plot.clus3.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.volcano_plot.clus3.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARACHIDONIC_ACID_METABOLISM.heatmap_plot.clus3.234.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus3.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.clus3.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY.volcano_plot.clus3.130.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.NON.clus3.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NRAGE_SIGNALS_DEATH_THROUGH_JNK.volcano_plot.clus3.246.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.heatmap_plot.clus3.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_REPRESSPATHWAY.heatmap_plot.clus3.285.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_EDG1_PATHWAY.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.volcano_plot.clus3.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE.heatmap_plot.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.volcano_plot.clus3.166.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT.volcano_plot.clus3.216.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.clus3.165.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus3.264.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_PATHWAY.heatmap_plot.NON.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.NON.clus3.138.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETADOWNSTREAMPATHWAY.heatmap_plot.clus3.286.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus3.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMYLOIDS.heatmap_plot.NON.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.clus3.163.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_DOWNSTREAM_PATHWAY.heatmap_plot.clus3.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GPCR_PATHWAY.heatmap_plot.clus3.253.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.heatmap_plot.clus3.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MYOSIN_PATHWAY.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TIGHT_JUNCTION.volcano_plot.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus3.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC.heatmap_plot.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.volcano_plot.clus3.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.heatmap_plot.clus3.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION.volcano_plot.NON.clus3.127.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_BETACATENIN_NUC_PATHWAY.heatmap_plot.clus3.225.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus3.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.heatmap_plot.clus3.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_WNT_SIGNALING_PATHWAY.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM1_INTERACTIONS.heatmap_plot.clus3.215.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_POTASSIUM_CHANNELS.heatmap_plot.clus3.279.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_GLYPICAN_1PATHWAY.volcano_plot.clus3.224.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS.volcano_plot.clus3.275.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.heatmap_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MET_PATHWAY.heatmap_plot.clus3.144.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEAR_SIGNALING_BY_ERBB4.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus3.268.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION.heatmap_plot.NON.clus3.133.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS.volcano_plot.clus3.277.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.volcano_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.heatmap_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus3.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION.volcano_plot.clus3.284.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus3.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MAPKTRKPATHWAY.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.volcano_plot.NON.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.volcano_plot.clus3.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PLK1_PATHWAY.volcano_plot.NON.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ER_NONGENOMIC_PATHWAY.heatmap_plot.clus3.134.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_P38MAPK_PATHWAY.heatmap_plot.clus3.141.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.clus3.219.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus3.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AR_NONGENOMIC_PATHWAY.heatmap_plot.clus3.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PTP1BPATHWAY.volcano_plot.clus3.187.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.clus3.239.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus3.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_IL6_7PATHWAY.volcano_plot.clus3.128.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_COLORECTAL_CANCER.heatmap_plot.clus3.274.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_MUTANTS.volcano_plot.clus3.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB2ERBB3PATHWAY.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLYCOSAMINOGLYCAN_METABOLISM.volcano_plot.clus3.240.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_EPOPATHWAY.heatmap_plot.clus3.217.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_VIP_PATHWAY.volcano_plot.clus3.142.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.clus3.150.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPONSE_TO_ELEVATED_PLATELET_CYTOSOLIC_CA2_.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ERBB_SIGNALING_PATHWAY.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.heatmap_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AURORA_B_PATHWAY.heatmap_plot.NON.clus3.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOMA.heatmap_plot.clus3.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PROSTATE_CANCER.heatmap_plot.clus3.222.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus3.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_ALK_PATHWAY.volcano_plot.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AMINE_LIGAND_BINDING_RECEPTORS.heatmap_plot.clus3.236.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_DOWNSTREAM_SIGNALING.heatmap_plot.clus3.196.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_AXON_GUIDANCE.heatmap_plot.clus3.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_GH_PATHWAY.heatmap_plot.clus3.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PAR1_PATHWAY.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GPCR_LIGAND_BINDING.heatmap_plot.clus3.242.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION.heatmap_plot.NON.clus3.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_P38_MAPK_PATHWAY.heatmap_plot.clus3.283.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus3.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.volcano_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN_CS_PATHWAY.heatmap_plot.clus3.252.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus3.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.NON.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR_IN_DISEASE.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus3.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_PDGFRBPATHWAY.volcano_plot.clus3.146.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P53DOWNSTREAMPATHWAY.volcano_plot.clus3.281.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ALK1PATHWAY.volcano_plot.clus3.220.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB1_INTERNALIZATION_PATHWAY.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TGFBRPATHWAY.heatmap_plot.clus3.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus3.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.clus3.243.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus3.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_AVB3_INTEGRIN_PATHWAY.heatmap_plot.clus3.168.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DAG_AND_IP3_SIGNALING.volcano_plot.clus3.162.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE.volcano_plot.clus3.278.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.heatmap_plot.clus3.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_IL4RECEPTOR_IN_B_LYPHOCYTES.heatmap_plot.clus3.230.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES.heatmap_plot.clus3.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ARF6_PATHWAY.volcano_plot.clus3.159.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GLIOMA.volcano_plot.clus3.154.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_ERK1_ERK2_MAPK_PATHWAY.heatmap_plot.clus3.132.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_GA13_PATHWAY.heatmap_plot.clus3.248.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38_MKK3_6PATHWAY.volcano_plot.clus3.124.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.clus3.197.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES.heatmap_plot.clus3.153.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_S1P_S1P3_PATHWAY.heatmap_plot.clus3.182.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.clus3.221.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_P38ALPHABETAPATHWAY.heatmap_plot.clus3.152.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS.volcano_plot.clus3.257.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MELANOGENESIS.volcano_plot.clus3.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus3.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_REELINPATHWAY.heatmap_plot.clus3.280.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus3.123.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_E2F_PATHWAY.volcano_plot.NON.clus3.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.clus3.126.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHOSPHOLIPID_METABOLISM.heatmap_plot.clus3.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION.volcano_plot.clus3.271.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus3.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYMPHANGIOGENESIS_PATHWAY.heatmap_plot.clus3.183.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TCPTP_PATHWAY.volcano_plot.clus3.244.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_GAP_JUNCTION.heatmap_plot.clus3.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GAB1_SIGNALOSOME.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CA_DEPENDENT_EVENTS.volcano_plot.clus3.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TGF_BETA_SIGNALING_PATHWAY.heatmap_plot.clus3.177.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI3K_EVENTS_IN_ERBB4_SIGNALING.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_THROMBIN_PAR1_PATHWAY.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.volcano_plot.NON.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOTIC_EXECUTION_PHASE.volcano_plot.clus3.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NUCLEOTIDES.heatmap_plot.NON.clus3.140.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_FCER1PATHWAY.heatmap_plot.clus3.156.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus3.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INTEGRIN1_PATHWAY.volcano_plot.clus3.250.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ERBB4.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.volcano_plot.clus3.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_NFAT_PATHWAY.heatmap_plot.clus3.190.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus3.175.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NEURONAL_SYSTEM.heatmap_plot.clus3.176.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus3.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_INSULIN_SECRETION.volcano_plot.clus3.205.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus3.210.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_PDGF_PATHWAY.volcano_plot.clus3.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION.heatmap_plot.NON.clus3.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ACTIVATED_TLR4_SIGNALLING.heatmap_plot.clus3.237.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_O_GLYCAN_BIOSYNTHESIS.volcano_plot.clus3.198.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_TRKRPATHWAY.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus3.202.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS.heatmap_plot.clus3.170.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_LYSOPHOSPHOLIPID_PATHWAY.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus3.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G2_G2_M_PHASES.volcano_plot.NON.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RAS_PATHWAY.heatmap_plot.clus3.218.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus3.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM.heatmap_plot.clus3.195.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES.volcano_plot.clus3.191.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus3.273.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_BIOPEPTIDES_PATHWAY.heatmap_plot.clus3.209.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_FATTY_ACID_METABOLISM.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_INSULIN_PATHWAY.volcano_plot.clus3.151.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus7___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	BRCA-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	BRCA-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_BRCA-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_BRCA-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
