name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-A6-2671-01A-01D-1408-10	125	124	1	79	8.000000e-03	coding only	1	28835288	...	45	69	125	1.560588e-06	2.392901e-06	4.334966e-06	-5.363014e+00	...	10	28779097	...	3.474744e-07
TCGA-A6-2672-01A-01W-0833-10	585	581	4	406	6.837607e-03	coding only	1	28835288	...	175	397	585	6.068953e-06	1.376785e-05	2.028764e-05	-4.692768e+00	...	9	28779097	...	3.127270e-07
TCGA-A6-2674-01A-02W-0831-10	28	27	1	19	3.571429e-02	coding only	1	28835288	...	8	19	28	2.774378e-07	6.589149e-07	9.710324e-07	-6.012766e+00	...	0	28779097	...	0
TCGA-A6-2676-01A-01W-0833-10	802	794	8	574	9.975062e-03	coding only	1	28835288	...	220	527	802	7.629541e-06	1.827622e-05	2.781314e-05	-4.555750e+00	...	47	28779097	...	1.633130e-06
TCGA-A6-2677-01A-01W-0831-10	77	76	1	55	1.298701e-02	coding only	1	28835288	...	21	52	77	7.282743e-07	1.803346e-06	2.670339e-06	-5.573434e+00	...	3	28779097	...	1.042423e-07
TCGA-A6-2678-01A-01W-0831-10	69	69	0	62	0	coding only	1	28835288	...	7	62	69	2.427581e-07	2.150143e-06	2.392901e-06	-5.621075e+00	...	0	28779097	...	0
TCGA-A6-2683-01A-01W-0831-10	101	100	1	69	9.900990e-03	coding only	1	28835288	...	31	67	101	1.075072e-06	2.323542e-06	3.502653e-06	-5.455603e+00	...	2	28779097	...	6.949488e-08
TCGA-A6-3807-01A-01W-0995-10	88	87	1	69	1.136364e-02	coding only	1	28835288	...	18	67	88	6.242351e-07	2.323542e-06	3.051816e-06	-5.515442e+00	...	1	28779097	...	3.474744e-08
TCGA-A6-3808-01A-01W-0995-10	117	114	3	94	2.564103e-02	coding only	1	28835288	...	20	92	117	6.935946e-07	3.190535e-06	4.057528e-06	-5.391738e+00	...	2	28779097	...	6.949488e-08
TCGA-A6-3809-01A-01W-0995-10	890	877	13	667	1.460674e-02	coding only	1	28835288	...	207	500	877	7.178704e-06	1.733986e-05	3.041412e-05	-4.516925e+00	...	157	28779097	...	5.455348e-06
TCGA-A6-3810-01A-01W-0995-10	116	115	1	92	8.620690e-03	coding only	1	28835288	...	23	90	115	7.976338e-07	3.121176e-06	3.988169e-06	-5.399226e+00	...	1	28779097	...	3.474744e-08
TCGA-A6-4105-01A-02D-1771-10	268	267	1	195	3.731343e-03	coding only	1	28835288	...	71	190	266	2.462261e-06	6.589149e-06	9.224808e-06	-5.035043e+00	...	4	28779097	...	1.389898e-07
TCGA-A6-5656-01A-21D-1835-10	159	155	4	104	2.515723e-02	coding only	1	28835288	...	51	95	157	1.768666e-06	3.294574e-06	5.444718e-06	-5.264025e+00	...	7	28779097	...	2.432321e-07
TCGA-A6-5657-01A-01D-1650-10	272	269	3	199	1.102941e-02	coding only	1	28835288	...	70	188	267	2.427581e-06	6.519789e-06	9.259488e-06	-5.033413e+00	...	7	28779097	...	2.432321e-07
TCGA-A6-5659-01A-01D-1650-10	322	319	3	224	9.316770e-03	coding only	1	28835288	...	93	212	316	3.225215e-06	7.352103e-06	1.095879e-05	-4.960237e+00	...	8	28779097	...	2.779795e-07
TCGA-A6-5660-01A-01D-1650-10	294	291	3	209	1.020408e-02	coding only	1	28835288	...	82	199	292	2.843738e-06	6.901266e-06	1.012648e-05	-4.994541e+00	...	8	28779097	...	2.779795e-07
TCGA-A6-5661-01A-01D-1650-10	1508	1474	34	1123	2.254642e-02	coding only	1	28835288	...	347	843	1478	1.203387e-05	2.923501e-05	5.125664e-05	-4.290250e+00	...	255	28779097	...	8.860598e-06
TCGA-A6-5662-01A-01D-1650-10	217	212	5	152	2.304147e-02	coding only	1	28835288	...	60	140	214	2.080784e-06	4.855162e-06	7.421462e-06	-5.129511e+00	...	9	28779097	...	3.127270e-07
TCGA-A6-5664-01A-21D-1835-10	98	95	3	72	3.061224e-02	coding only	1	28835288	...	23	64	97	7.976338e-07	2.219503e-06	3.363934e-06	-5.473153e+00	...	7	28779097	...	2.432321e-07
TCGA-A6-5665-01A-01D-1650-10	2254	2195	59	1729	2.617569e-02	coding only	1	28835288	...	463	1198	2214	1.605671e-05	4.154632e-05	7.678092e-05	-4.114747e+00	...	495	28779097	...	1.719998e-05
TCGA-A6-5666-01A-01D-1650-10	352	349	3	249	8.522727e-03	coding only	1	28835288	...	99	242	350	3.433293e-06	8.392495e-06	1.213791e-05	-4.915856e+00	...	6	28779097	...	2.084847e-07
TCGA-A6-6137-01A-11D-1771-10	153	151	2	109	1.307190e-02	coding only	1	28835288	...	42	105	153	1.456549e-06	3.641372e-06	5.305999e-06	-5.275233e+00	...	4	28779097	...	1.389898e-07
TCGA-A6-6138-01A-11D-1771-10	189	184	5	122	2.645503e-02	coding only	1	28835288	...	62	116	188	2.150143e-06	4.022849e-06	6.519789e-06	-5.185766e+00	...	5	28779097	...	1.737372e-07
TCGA-A6-6141-01A-11D-1771-10	1172	1151	21	856	1.791809e-02	coding only	1	28835288	...	289	838	1147	1.002244e-05	2.906161e-05	3.977765e-05	-4.400361e+00	...	3	28779097	...	1.042423e-07
TCGA-A6-6142-01A-11D-1771-10	135	134	1	94	7.407407e-03	coding only	1	28835288	...	40	84	133	1.387189e-06	2.913097e-06	4.612404e-06	-5.336073e+00	...	8	28779097	...	2.779795e-07
TCGA-A6-6648-01A-11D-1771-10	141	136	5	106	3.546099e-02	exome+100bp flanks	2	35805903	...	30	98	137	8.378507e-07	2.736979e-06	3.826185e-06	-5.417234e+00	...	4	32092041	...	1.246415e-07
TCGA-A6-6649-01A-11D-1771-10	197	191	6	136	3.045685e-02	exome+100bp flanks	2	35805903	...	55	129	193	1.536060e-06	3.602758e-06	5.390173e-06	-5.268397e+00	...	4	32092041	...	1.246415e-07
TCGA-A6-6651-01A-21D-1835-10	176	176	0	116	0	coding only	1	28835288	...	59	109	174	2.046104e-06	3.780091e-06	6.034273e-06	-5.219375e+00	...	6	28779097	...	2.084847e-07
TCGA-A6-6652-01A-11D-1771-10	151	148	3	111	1.986755e-02	coding only	1	28835288	...	37	101	148	1.283150e-06	3.502653e-06	5.132600e-06	-5.289663e+00	...	7	28779097	...	2.432321e-07
TCGA-A6-6653-01A-11D-1771-10	1273	1241	32	926	2.513747e-02	coding only	1	28835288	...	309	693	1251	1.071604e-05	2.403305e-05	4.338434e-05	-4.362667e+00	...	220	28779097	...	7.644437e-06
TCGA-A6-6654-01A-21D-1835-10	274	272	2	179	7.299270e-03	coding only	1	28835288	...	93	170	271	3.225215e-06	5.895554e-06	9.398207e-06	-5.026955e+00	...	6	28779097	...	2.084847e-07
TCGA-A6-6780-01A-11D-1835-10	1202	1181	21	901	1.747088e-02	coding only	1	28835288	...	276	673	1184	9.571605e-06	2.333946e-05	4.106080e-05	-4.386573e+00	...	215	28779097	...	7.470700e-06
TCGA-A6-6781-01A-22D-1924-10	2018	1973	45	1491	2.229931e-02	coding only	1	28835288	...	471	1175	1984	1.633415e-05	4.074868e-05	6.880458e-05	-4.162383e+00	...	295	28779097	...	1.025050e-05
TCGA-A6-6782-01A-11D-1835-10	200	197	3	138	1.500000e-02	coding only	1	28835288	...	58	129	194	2.011424e-06	4.473685e-06	6.727868e-06	-5.172123e+00	...	4	28779097	...	1.389898e-07
TCGA-AA-3489-01A-21D-1835-10	126	124	2	93	1.587302e-02	coding only	1	28835288	...	31	87	126	1.075072e-06	3.017137e-06	4.369646e-06	-5.359554e+00	...	6	28779097	...	2.084847e-07
TCGA-AA-3492-01A-01D-1408-10	2236	2194	42	1643	1.878354e-02	coding only	1	28835288	...	540	1258	2190	1.872705e-05	4.362710e-05	7.594861e-05	-4.119480e+00	...	352	28779097	...	1.223110e-05
TCGA-AA-3496-01A-21D-1835-10	367	355	12	259	3.269755e-02	exome+100bp flanks	2	35805903	...	95	245	362	2.653194e-06	6.842447e-06	1.011006e-05	-4.995246e+00	...	10	32092041	...	3.116037e-07
TCGA-AA-3502-01A-01D-1408-10	214	209	5	154	2.336449e-02	coding only	1	28835288	...	54	146	213	1.872705e-06	5.063241e-06	7.386782e-06	-5.131545e+00	...	7	28779097	...	2.432321e-07
TCGA-AA-3510-01A-01D-1408-10	3075	3004	71	2399	2.308943e-02	coding only	1	28835288	...	593	2345	3009	2.056508e-05	8.132397e-05	1.043513e-04	-3.981502e+00	...	8	28779097	...	2.779795e-07
TCGA-AA-3511-01A-21D-1835-10	160	160	0	123	0	coding only	1	28835288	...	34	118	155	1.179111e-06	4.092208e-06	5.375358e-06	-5.269593e+00	...	3	28779097	...	1.042423e-07
TCGA-AA-3514-01A-02W-0831-10	73	72	1	55	1.369863e-02	coding only	1	28835288	...	17	53	73	5.895554e-07	1.838026e-06	2.531620e-06	-5.596601e+00	...	2	28779097	...	6.949488e-08
TCGA-AA-3516-01A-02W-0833-10	914	897	17	668	1.859956e-02	coding only	1	28835288	...	229	649	912	7.941658e-06	2.250714e-05	3.162791e-05	-4.499929e+00	...	17	28779097	...	5.907065e-07
TCGA-AA-3517-01A-01W-0831-10	37	37	0	27	0	coding only	1	28835288	...	10	27	37	3.467973e-07	9.363527e-07	1.283150e-06	-5.891723e+00	...	0	28779097	...	0
TCGA-AA-3518-01A-02W-0833-10	551	542	9	401	1.633394e-02	coding only	1	28835288	...	141	381	550	4.889842e-06	1.321298e-05	1.907385e-05	-4.719562e+00	...	20	28779097	...	6.949488e-07
TCGA-AA-3519-01A-02W-0831-10	53	53	0	37	0	coding only	1	28835288	...	16	37	53	5.548757e-07	1.283150e-06	1.838026e-06	-5.735648e+00	...	0	28779097	...	0
TCGA-AA-3520-01A-01W-0831-10	68	68	0	54	0	coding only	1	28835288	...	14	54	68	4.855162e-07	1.872705e-06	2.358222e-06	-5.627415e+00	...	0	28779097	...	0
TCGA-AA-3521-01A-01W-0831-10	55	55	0	43	0	coding only	1	28835288	...	12	41	55	4.161568e-07	1.421869e-06	1.907385e-06	-5.719562e+00	...	2	28779097	...	6.949488e-08
TCGA-AA-3522-01A-01W-0831-10	58	57	1	41	1.724138e-02	coding only	1	28835288	...	16	41	58	5.548757e-07	1.421869e-06	2.011424e-06	-5.696496e+00	...	0	28779097	...	0
TCGA-AA-3524-01A-02W-0831-10	52	52	0	38	0	coding only	1	28835288	...	14	38	52	4.855162e-07	1.317830e-06	1.803346e-06	-5.743921e+00	...	0	28779097	...	0
TCGA-AA-3525-01A-02W-0833-10	610	605	5	453	8.196721e-03	coding only	1	28835288	...	152	422	610	5.271319e-06	1.463485e-05	2.115464e-05	-4.674594e+00	...	31	28779097	...	1.077171e-06
TCGA-AA-3526-01A-02W-0831-10	66	66	0	44	0	coding only	1	28835288	...	22	43	66	7.629541e-07	1.491228e-06	2.288862e-06	-5.640380e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3527-01A-01W-0831-10	89	89	0	65	0	coding only	1	28835288	...	24	64	89	8.323135e-07	2.219503e-06	3.086496e-06	-5.510534e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3529-01A-02W-0831-10	62	62	0	43	0	coding only	1	28835288	...	19	42	62	6.589149e-07	1.456549e-06	2.150143e-06	-5.667533e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3530-01A-01W-0995-10	83	82	1	65	1.204819e-02	coding only	1	28835288	...	17	64	83	5.895554e-07	2.219503e-06	2.878418e-06	-5.540846e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3531-01A-01W-0831-10	72	72	0	56	0	coding only	1	28835288	...	16	56	72	5.548757e-07	1.942065e-06	2.496941e-06	-5.602592e+00	...	0	28779097	...	0
TCGA-AA-3532-01A-01W-0831-10	41	41	0	32	0	coding only	1	28835288	...	9	29	41	3.121176e-07	1.005712e-06	1.421869e-06	-5.847140e+00	...	3	28779097	...	1.042423e-07
TCGA-AA-3534-01A-01W-0831-10	64	64	0	51	0	coding only	1	28835288	...	13	51	64	4.508365e-07	1.768666e-06	2.219503e-06	-5.653744e+00	...	0	28779097	...	0
TCGA-AA-3538-01A-01W-0831-10	46	45	1	31	2.173913e-02	coding only	1	28835288	...	14	30	46	4.855162e-07	1.040392e-06	1.595268e-06	-5.797166e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3542-01A-02W-0831-10	203	202	1	163	4.926108e-03	coding only	1	28835288	...	39	155	203	1.352509e-06	5.375358e-06	7.039985e-06	-5.152428e+00	...	8	28779097	...	2.779795e-07
TCGA-AA-3543-01A-01W-0833-10	234	232	2	190	8.547009e-03	coding only	1	28835288	...	42	183	234	1.456549e-06	6.346391e-06	8.115057e-06	-5.090708e+00	...	7	28779097	...	2.432321e-07
TCGA-AA-3544-01A-01W-0831-10	66	65	1	45	1.515152e-02	coding only	1	28835288	...	20	43	66	6.935946e-07	1.491228e-06	2.288862e-06	-5.640380e+00	...	2	28779097	...	6.949488e-08
TCGA-AA-3548-01A-01W-0831-10	40	40	0	31	0	coding only	1	28835288	...	9	30	40	3.121176e-07	1.040392e-06	1.387189e-06	-5.857864e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3549-01A-02W-0831-10	64	64	0	50	0	coding only	1	28835288	...	14	49	64	4.855162e-07	1.699307e-06	2.219503e-06	-5.653744e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3552-01A-01W-0831-10	61	61	0	44	0	coding only	1	28835288	...	17	44	61	5.895554e-07	1.525908e-06	2.115464e-06	-5.674594e+00	...	0	28779097	...	0
TCGA-AA-3553-01A-01W-0831-10	34	34	0	27	0	coding only	1	28835288	...	7	26	34	2.427581e-07	9.016730e-07	1.179111e-06	-5.928445e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3554-01A-01W-0833-10	324	318	6	236	1.851852e-02	coding only	1	28835288	...	82	234	324	2.843738e-06	8.115057e-06	1.123623e-05	-4.949379e+00	...	2	28779097	...	6.949488e-08
TCGA-AA-3555-01A-01W-0831-10	870	864	6	719	6.896552e-03	coding only	1	28835288	...	145	716	870	5.028561e-06	2.483069e-05	3.017137e-05	-4.520405e+00	...	3	28779097	...	1.042423e-07
TCGA-AA-3556-01A-01W-0831-10	43	43	0	29	0	coding only	1	28835288	...	14	29	43	4.855162e-07	1.005712e-06	1.491228e-06	-5.826456e+00	...	0	28779097	...	0
TCGA-AA-3558-01A-01W-0831-10	136	135	1	94	7.352941e-03	coding only	1	28835288	...	41	93	136	1.421869e-06	3.225215e-06	4.716443e-06	-5.326385e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3560-01A-01W-0831-10	58	58	0	46	0	coding only	1	28835288	...	12	45	58	4.161568e-07	1.560588e-06	2.011424e-06	-5.696496e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3561-01A-01W-0831-10	59	59	0	37	0	coding only	1	28835288	...	22	36	59	7.629541e-07	1.248470e-06	2.046104e-06	-5.689072e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3562-01A-02W-0831-10	48	47	1	31	2.083333e-02	coding only	1	28835288	...	16	30	48	5.548757e-07	1.040392e-06	1.664627e-06	-5.778683e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-3655-01A-02D-1719-10	255	250	5	178	1.960784e-02	coding only	1	28835288	...	72	170	253	2.496941e-06	5.895554e-06	8.773972e-06	-5.056804e+00	...	6	28779097	...	2.084847e-07
TCGA-AA-3660-01A-01D-1719-10	602	594	8	388	1.328904e-02	coding only	1	28835288	...	202	378	596	7.005305e-06	1.310894e-05	2.066912e-05	-4.684678e+00	...	8	28779097	...	2.779795e-07
TCGA-AA-3662-01A-01D-1719-10	399	396	3	290	7.518797e-03	coding only	1	28835288	...	105	283	396	3.641372e-06	9.814364e-06	1.373317e-05	-4.862229e+00	...	5	28779097	...	1.737372e-07
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TCGA-AA-A00N-01A-02W-A00E-09	4429	4372	57	3461	1.286972e-02	coding only	1	28835288	...	910	3456	4425	3.155855e-05	1.198531e-04	1.534578e-04	-3.814011e+00	...	3	28779097	...	1.042423e-07
TCGA-AA-A00O-01A-02W-A00E-09	82	82	0	60	0	coding only	1	28835288	...	22	58	82	7.629541e-07	2.011424e-06	2.843738e-06	-5.546110e+00	...	2	28779097	...	6.949488e-08
TCGA-AA-A00Q-01A-01W-A005-10	36	36	0	24	0	coding only	1	28835288	...	12	24	36	4.161568e-07	8.323135e-07	1.248470e-06	-5.903622e+00	...	0	28779097	...	0
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TCGA-AA-A00U-01A-01W-A005-10	86	86	0	64	0	coding only	1	28835288	...	22	63	86	7.629541e-07	2.184823e-06	2.982457e-06	-5.525426e+00	...	1	28779097	...	3.474744e-08
TCGA-AA-A00W-01A-01W-A005-10	27	27	0	23	0	coding only	1	28835288	...	4	21	27	1.387189e-07	7.282743e-07	9.363527e-07	-6.028561e+00	...	2	28779097	...	6.949488e-08
TCGA-AA-A00Z-01A-01W-A005-10	42	42	0	28	0	coding only	1	28835288	...	14	28	42	4.855162e-07	9.710324e-07	1.456549e-06	-5.836675e+00	...	0	28779097	...	0
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TCGA-AA-A02F-01A-01W-A00E-09	64	63	1	45	1.562500e-02	coding only	1	28835288	...	18	40	64	6.242351e-07	1.387189e-06	2.219503e-06	-5.653744e+00	...	5	28779097	...	1.737372e-07
TCGA-AA-A02H-01A-01W-A00E-09	74	74	0	56	0	coding only	1	28835288	...	18	53	74	6.242351e-07	1.838026e-06	2.566300e-06	-5.590693e+00	...	3	28779097	...	1.042423e-07
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TCGA-AD-6901-01A-11D-1924-10	312	307	5	227	1.602564e-02	coding only	1	28835288	...	77	216	306	2.670339e-06	7.490822e-06	1.061200e-05	-4.974203e+00	...	8	28779097	...	2.779795e-07
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TCGA-AD-6964-01A-11D-1924-10	1393	1371	22	1040	1.579325e-02	coding only	1	28835288	...	328	873	1379	1.137495e-05	3.027540e-05	4.782335e-05	-4.320360e+00	...	156	28779097	...	5.420601e-06
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TCGA-AY-6196-01A-11D-1719-10	530	524	6	393	1.132075e-02	coding only	1	28835288	...	128	382	523	4.439005e-06	1.324766e-05	1.813750e-05	-4.741423e+00	...	7	28779097	...	2.432321e-07
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TCGA-AZ-4323-01A-21D-1835-10	82	82	0	62	0	coding only	1	28835288	...	20	59	80	6.935946e-07	2.046104e-06	2.774378e-06	-5.556834e+00	...	1	28779097	...	3.474744e-08
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TCGA-AZ-4682-01B-01D-1408-10	127	122	5	82	3.937008e-02	exome+100bp flanks	2	35805903	...	40	76	123	1.117134e-06	2.122555e-06	3.435188e-06	-5.464050e+00	...	2	32092041	...	6.232075e-08
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TCGA-AZ-6598-01A-11D-1771-10	3061	2998	63	2298	2.058151e-02	coding only	1	28835288	...	692	1678	3019	2.399837e-05	5.819259e-05	1.046981e-04	-3.980061e+00	...	586	28779097	...	2.036200e-05
TCGA-AZ-6599-01A-11D-1771-10	793	781	12	520	1.513241e-02	coding only	1	28835288	...	259	512	789	8.982050e-06	1.775602e-05	2.736231e-05	-4.562847e+00	...	6	28779097	...	2.084847e-07
TCGA-AZ-6600-01A-11D-1771-10	459	456	3	326	6.535948e-03	coding only	1	28835288	...	130	317	458	4.508365e-06	1.099347e-05	1.588332e-05	-4.799059e+00	...	6	28779097	...	2.084847e-07
TCGA-AZ-6601-01A-11D-1771-10	2301	2257	44	1611	1.912212e-02	coding only	1	28835288	...	639	1544	2281	2.216035e-05	5.354550e-05	7.910446e-05	-4.101799e+00	...	55	28779097	...	1.911109e-06
TCGA-AZ-6603-01A-11D-1835-10	222	220	2	163	9.009009e-03	coding only	1	28835288	...	57	156	222	1.976745e-06	5.410038e-06	7.698900e-06	-5.113571e+00	...	7	28779097	...	2.432321e-07
TCGA-AZ-6605-01A-11D-1835-10	193	192	1	138	5.181347e-03	coding only	1	28835288	...	54	134	193	1.872705e-06	4.647084e-06	6.693188e-06	-5.174367e+00	...	4	28779097	...	1.389898e-07
TCGA-AZ-6606-01A-11D-1835-10	193	191	2	137	1.036269e-02	coding only	1	28835288	...	54	125	191	1.872705e-06	4.334966e-06	6.623828e-06	-5.178891e+00	...	10	28779097	...	3.474744e-07
TCGA-AZ-6607-01A-11D-1835-10	144	142	2	102	1.388889e-02	coding only	1	28835288	...	40	100	142	1.387189e-06	3.467973e-06	4.924522e-06	-5.307636e+00	...	0	28779097	...	0
TCGA-AZ-6608-01A-11D-1835-10	367	363	4	251	1.089918e-02	coding only	1	28835288	...	112	241	365	3.884130e-06	8.357815e-06	1.265810e-05	-4.897631e+00	...	8	28779097	...	2.779795e-07
TCGA-CA-5254-01A-21D-1835-10	206	201	5	151	2.427184e-02	coding only	1	28835288	...	49	143	202	1.699307e-06	4.959201e-06	7.005305e-06	-5.154573e+00	...	6	28779097	...	2.084847e-07
TCGA-CA-5255-01A-11D-1835-10	80	80	0	61	0	coding only	1	28835288	...	18	57	79	6.242351e-07	1.976745e-06	2.739699e-06	-5.562297e+00	...	4	28779097	...	1.389898e-07
TCGA-CA-5796-01A-01D-1650-10	126	124	2	87	1.587302e-02	coding only	1	28835288	...	36	80	123	1.248470e-06	2.774378e-06	4.265607e-06	-5.370019e+00	...	5	28779097	...	1.737372e-07
TCGA-CA-5797-01A-01D-1650-10	154	151	3	106	1.948052e-02	coding only	1	28835288	...	45	96	152	1.560588e-06	3.329254e-06	5.271319e-06	-5.278081e+00	...	8	28779097	...	2.779795e-07
TCGA-CA-6715-01A-21D-1835-10	174	172	2	123	1.149425e-02	coding only	1	28835288	...	49	114	172	1.699307e-06	3.953489e-06	5.964914e-06	-5.224396e+00	...	7	28779097	...	2.432321e-07
TCGA-CA-6716-01A-11D-1835-10	291	285	6	200	2.061856e-02	coding only	1	28835288	...	81	190	284	2.809058e-06	6.589149e-06	9.849043e-06	-5.006606e+00	...	8	28779097	...	2.779795e-07
TCGA-CA-6717-01A-11D-1835-10	8452	8299	153	6734	1.810222e-02	coding only	1	28835288	...	1540	6609	8302	5.340678e-05	2.291983e-04	2.879111e-04	-3.540742e+00	...	17	28779097	...	5.907065e-07
TCGA-CA-6718-01A-11D-1835-10	3140	3077	63	2514	2.006369e-02	coding only	1	28835288	...	556	2463	3086	1.928193e-05	8.541617e-05	1.070216e-04	-3.970528e+00	...	11	28779097	...	3.822219e-07
TCGA-CA-6719-01A-11D-1835-10	192	191	1	146	5.208333e-03	coding only	1	28835288	...	45	134	187	1.560588e-06	4.647084e-06	6.485109e-06	-5.188083e+00	...	7	28779097	...	2.432321e-07
TCGA-CK-4947-01B-11D-1650-10	245	241	4	169	1.632653e-02	coding only	1	28835288	...	71	159	240	2.462261e-06	5.514077e-06	8.323135e-06	-5.079713e+00	...	7	28779097	...	2.432321e-07
TCGA-CK-4948-01B-11D-1650-10	261	256	5	181	1.915709e-02	coding only	1	28835288	...	75	173	260	2.600980e-06	5.999593e-06	9.016730e-06	-5.044951e+00	...	7	28779097	...	2.432321e-07
TCGA-CK-4950-01A-01D-1719-10	454	443	11	315	2.422907e-02	coding only	1	28835288	...	128	305	451	4.439005e-06	1.057732e-05	1.564056e-05	-4.805748e+00	...	7	28779097	...	2.432321e-07
TCGA-CK-4952-01A-01D-1719-10	668	661	7	476	1.047904e-02	coding only	1	28835288	...	184	467	666	6.381070e-06	1.619543e-05	2.309670e-05	-4.636450e+00	...	8	28779097	...	2.779795e-07
TCGA-CK-5912-01A-11D-1650-10	174	173	1	119	5.747126e-03	coding only	1	28835288	...	54	112	173	1.872705e-06	3.884130e-06	5.999593e-06	-5.221878e+00	...	6	28779097	...	2.084847e-07
TCGA-CK-5913-01A-11D-1650-10	1006	984	22	747	2.186879e-02	coding only	1	28835288	...	232	546	988	8.045697e-06	1.893513e-05	3.426357e-05	-4.465167e+00	...	190	28779097	...	6.602014e-06
TCGA-CK-5914-01A-11D-1650-10	282	281	1	216	3.546099e-03	coding only	1	28835288	...	64	207	280	2.219503e-06	7.178704e-06	9.710324e-06	-5.012766e+00	...	8	28779097	...	2.779795e-07
TCGA-CK-5915-01A-11D-1650-10	278	274	4	192	1.438849e-02	coding only	1	28835288	...	82	177	275	2.843738e-06	6.138312e-06	9.536926e-06	-5.020592e+00	...	12	28779097	...	4.169693e-07
TCGA-CK-5916-01A-11D-1650-10	936	913	23	754	2.457265e-02	coding only	1	28835288	...	152	414	916	5.271319e-06	1.435741e-05	3.176663e-05	-4.498029e+00	...	328	28779097	...	1.139716e-05
TCGA-CK-6746-01A-11D-1835-10	1436	1412	24	1098	1.671309e-02	coding only	1	28835288	...	309	792	1408	1.071604e-05	2.746635e-05	4.882906e-05	-4.311322e+00	...	284	28779097	...	9.868273e-06
TCGA-CK-6747-01A-11D-1835-10	268	263	5	203	1.865672e-02	coding only	1	28835288	...	58	136	262	2.011424e-06	4.716443e-06	9.086089e-06	-5.041623e+00	...	63	28779097	...	2.189089e-06
TCGA-CK-6748-01A-11D-1835-10	132	130	2	92	1.515152e-02	coding only	1	28835288	...	37	86	130	1.283150e-06	2.982457e-06	4.508365e-06	-5.345981e+00	...	5	28779097	...	1.737372e-07
TCGA-CK-6751-01A-11D-1835-10	286	284	2	208	6.993007e-03	coding only	1	28835288	...	76	199	283	2.635659e-06	6.901266e-06	9.814364e-06	-5.008138e+00	...	7	28779097	...	2.432321e-07
TCGA-CM-4743-01A-01D-1719-10	1520	1483	37	1118	2.434211e-02	coding only	1	28835288	...	363	852	1499	1.258874e-05	2.954713e-05	5.198492e-05	-4.284123e+00	...	250	28779097	...	8.686860e-06
TCGA-CM-4744-01A-01D-1408-10	200	198	2	149	1.000000e-02	coding only	1	28835288	...	49	135	197	1.699307e-06	4.681764e-06	6.831907e-06	-5.165458e+00	...	11	28779097	...	3.822219e-07
TCGA-CM-4746-01A-01D-1408-10	852	832	20	618	2.347418e-02	coding only	1	28835288	...	213	496	848	7.386782e-06	1.720115e-05	2.940841e-05	-4.531528e+00	...	119	28779097	...	4.134946e-06
TCGA-CM-4747-01A-01D-1408-10	119	119	0	82	0	coding only	1	28835288	...	36	78	118	1.248470e-06	2.705019e-06	4.092208e-06	-5.388042e+00	...	4	28779097	...	1.389898e-07
TCGA-CM-4752-01A-01D-1408-10	405	403	2	286	4.938272e-03	coding only	1	28835288	...	117	275	402	4.057528e-06	9.536926e-06	1.394125e-05	-4.855698e+00	...	8	28779097	...	2.779795e-07
TCGA-CM-5341-01A-01D-1408-10	174	170	4	125	2.298851e-02	coding only	1	28835288	...	45	119	169	1.560588e-06	4.126888e-06	5.860874e-06	-5.232038e+00	...	1	28779097	...	3.474744e-08
TCGA-CM-5344-01A-21D-1719-10	326	321	5	230	1.533742e-02	coding only	1	28835288	...	91	222	325	3.155855e-06	7.698900e-06	1.127091e-05	-4.948041e+00	...	7	28779097	...	2.432321e-07
TCGA-CM-5348-01A-21D-1719-10	493	490	3	346	6.085193e-03	coding only	1	28835288	...	144	335	488	4.993881e-06	1.161771e-05	1.692371e-05	-4.771504e+00	...	6	28779097	...	2.084847e-07
TCGA-CM-5349-01A-21D-1719-10	452	448	4	313	8.849558e-03	coding only	1	28835288	...	134	303	450	4.647084e-06	1.050796e-05	1.560588e-05	-4.806712e+00	...	9	28779097	...	3.127270e-07
TCGA-CM-5860-01A-01D-1650-10	392	389	3	280	7.653061e-03	coding only	1	28835288	...	109	278	390	3.780091e-06	9.640965e-06	1.352509e-05	-4.868860e+00	...	0	28779097	...	0
TCGA-CM-5861-01A-01D-1650-10	1708	1673	35	1247	2.049180e-02	coding only	1	28835288	...	418	979	1675	1.449613e-05	3.395146e-05	5.808855e-05	-4.235909e+00	...	244	28779097	...	8.478376e-06
TCGA-CM-5862-01A-01D-1650-10	279	273	6	192	2.150538e-02	coding only	1	28835288	...	80	181	277	2.774378e-06	6.277031e-06	9.606285e-06	-5.017445e+00	...	10	28779097	...	3.474744e-07
TCGA-CM-5863-01A-21D-1835-10	107	106	1	72	9.345794e-03	coding only	1	28835288	...	34	69	106	1.179111e-06	2.392901e-06	3.676051e-06	-5.434618e+00	...	3	28779097	...	1.042423e-07
TCGA-CM-5864-01A-01D-1650-10	380	376	4	271	1.052632e-02	coding only	1	28835288	...	105	260	372	3.641372e-06	9.016730e-06	1.290086e-05	-4.889381e+00	...	4	28779097	...	1.389898e-07
TCGA-CM-5868-01A-01D-1650-10	341	336	5	231	1.466276e-02	coding only	1	28835288	...	104	221	337	3.606692e-06	7.664220e-06	1.168707e-05	-4.932294e+00	...	7	28779097	...	2.432321e-07
TCGA-CM-6161-01A-11D-1650-10	319	313	6	224	1.880878e-02	coding only	1	28835288	...	89	215	317	3.086496e-06	7.456142e-06	1.099347e-05	-4.958865e+00	...	7	28779097	...	2.432321e-07
TCGA-CM-6162-01A-11D-1650-10	1296	1271	25	919	1.929012e-02	coding only	1	28835288	...	346	770	1266	1.199919e-05	2.670339e-05	4.390454e-05	-4.357491e+00	...	127	28779097	...	4.412925e-06
TCGA-CM-6163-01A-11D-1650-10	231	228	3	166	1.298701e-02	coding only	1	28835288	...	61	160	228	2.115464e-06	5.548757e-06	7.906978e-06	-5.101989e+00	...	4	28779097	...	1.389898e-07
TCGA-CM-6164-01A-11D-1650-10	247	241	6	171	2.429150e-02	coding only	1	28835288	...	69	170	246	2.392901e-06	5.895554e-06	8.531214e-06	-5.068989e+00	...	1	28779097	...	3.474744e-08
TCGA-CM-6165-01A-11D-1650-10	183	182	1	130	5.464481e-03	coding only	1	28835288	...	52	119	180	1.803346e-06	4.126888e-06	6.242351e-06	-5.204652e+00	...	9	28779097	...	3.127270e-07
TCGA-CM-6166-01A-11D-1650-10	195	193	2	147	1.025641e-02	coding only	1	28835288	...	46	139	194	1.595268e-06	4.820482e-06	6.727868e-06	-5.172123e+00	...	7	28779097	...	2.432321e-07
TCGA-CM-6167-01A-11D-1650-10	188	185	3	130	1.595745e-02	coding only	1	28835288	...	54	122	185	1.872705e-06	4.230927e-06	6.415750e-06	-5.192753e+00	...	6	28779097	...	2.084847e-07
TCGA-CM-6168-01A-11D-1650-10	369	367	2	271	5.420054e-03	coding only	1	28835288	...	95	264	366	3.294574e-06	9.155449e-06	1.269278e-05	-4.896443e+00	...	5	28779097	...	1.737372e-07
TCGA-CM-6169-01A-11D-1650-10	237	233	4	174	1.687764e-02	coding only	1	28835288	...	59	165	234	2.046104e-06	5.722155e-06	8.115057e-06	-5.090708e+00	...	7	28779097	...	2.432321e-07
TCGA-CM-6170-01A-11D-1650-10	216	207	9	144	4.166667e-02	exome+100bp flanks	2	35805903	...	62	138	213	1.731558e-06	3.854113e-06	5.948740e-06	-5.225575e+00	...	5	32092041	...	1.558019e-07
TCGA-CM-6171-01A-11D-1650-10	1526	1496	30	1120	1.965924e-02	coding only	1	28835288	...	372	851	1502	1.290086e-05	2.951245e-05	5.208895e-05	-4.283254e+00	...	252	28779097	...	8.756355e-06
TCGA-CM-6172-01A-11D-1650-10	259	258	1	169	3.861004e-03	coding only	1	28835288	...	88	161	258	3.051816e-06	5.583437e-06	8.947370e-06	-5.048305e+00	...	8	28779097	...	2.779795e-07
TCGA-CM-6674-01A-11D-1835-10	1025	1005	20	751	1.951220e-02	coding only	1	28835288	...	252	597	1009	8.739292e-06	2.070380e-05	3.499185e-05	-4.456033e+00	...	142	28779097	...	4.934137e-06
TCGA-CM-6675-01A-11D-1835-10	161	158	3	119	1.863354e-02	coding only	1	28835288	...	39	110	159	1.352509e-06	3.814770e-06	5.514077e-06	-5.258527e+00	...	7	28779097	...	2.432321e-07
TCGA-CM-6676-01A-11D-1835-10	233	232	1	166	4.291845e-03	coding only	1	28835288	...	65	163	231	2.254182e-06	5.652796e-06	8.011018e-06	-5.096312e+00	...	2	28779097	...	6.949488e-08
TCGA-CM-6677-01A-11D-1835-10	215	213	2	160	9.302326e-03	coding only	1	28835288	...	53	152	215	1.838026e-06	5.271319e-06	7.456142e-06	-5.127486e+00	...	8	28779097	...	2.779795e-07
TCGA-CM-6678-01A-11D-1835-10	253	247	6	170	2.371542e-02	coding only	1	28835288	...	76	160	247	2.635659e-06	5.548757e-06	8.565893e-06	-5.067227e+00	...	5	28779097	...	1.737372e-07
TCGA-CM-6679-01A-11D-1835-10	112	110	2	76	1.785714e-02	coding only	1	28835288	...	33	72	111	1.144431e-06	2.496941e-06	3.849450e-06	-5.414601e+00	...	4	28779097	...	1.389898e-07
TCGA-CM-6680-01A-11D-1835-10	204	202	2	135	9.803922e-03	coding only	1	28835288	...	67	126	204	2.323542e-06	4.369646e-06	7.074665e-06	-5.150294e+00	...	9	28779097	...	3.127270e-07
TCGA-D5-5537-01A-21D-1924-10	176	175	1	122	5.681818e-03	coding only	1	28835288	...	51	111	169	1.768666e-06	3.849450e-06	5.860874e-06	-5.232038e+00	...	6	28779097	...	2.084847e-07
TCGA-D5-5538-01A-01D-1650-10	300	293	7	213	2.333333e-02	coding only	1	28835288	...	80	208	299	2.774378e-06	7.213384e-06	1.036924e-05	-4.984253e+00	...	4	28779097	...	1.389898e-07
TCGA-D5-5539-01A-01D-1650-10	328	326	2	225	6.097561e-03	coding only	1	28835288	...	101	217	322	3.502653e-06	7.525501e-06	1.116687e-05	-4.952068e+00	...	3	28779097	...	1.042423e-07
TCGA-D5-5540-01A-01D-1650-10	280	274	6	190	2.142857e-02	coding only	1	28835288	...	83	182	277	2.878418e-06	6.311711e-06	9.606285e-06	-5.017445e+00	...	6	28779097	...	2.084847e-07
TCGA-D5-5541-01A-01D-1650-10	220	218	2	146	9.090909e-03	coding only	1	28835288	...	71	141	219	2.462261e-06	4.889842e-06	7.594861e-06	-5.119480e+00	...	5	28779097	...	1.737372e-07
TCGA-D5-6529-01A-11D-1771-10	242	237	5	160	2.066116e-02	coding only	1	28835288	...	76	155	240	2.635659e-06	5.375358e-06	8.323135e-06	-5.079713e+00	...	4	28779097	...	1.389898e-07
TCGA-D5-6532-01A-11D-1719-10	381	378	3	260	7.874016e-03	coding only	1	28835288	...	117	251	379	4.057528e-06	8.704612e-06	1.314362e-05	-4.881285e+00	...	7	28779097	...	2.432321e-07
TCGA-D5-6533-01A-11D-1719-10	474	470	4	344	8.438819e-03	coding only	1	28835288	...	125	330	469	4.334966e-06	1.144431e-05	1.626479e-05	-4.788751e+00	...	10	28779097	...	3.474744e-07
TCGA-D5-6534-01A-21D-1924-10	201	197	4	147	1.990050e-02	coding only	1	28835288	...	50	138	196	1.733986e-06	4.785803e-06	6.797227e-06	-5.167668e+00	...	5	28779097	...	1.737372e-07
TCGA-D5-6535-01A-11D-1719-10	446	441	5	325	1.121076e-02	coding only	1	28835288	...	116	316	443	4.022849e-06	1.095879e-05	1.536312e-05	-4.813521e+00	...	6	28779097	...	2.084847e-07
TCGA-D5-6536-01A-11D-1719-10	434	431	3	316	6.912442e-03	coding only	1	28835288	...	114	309	433	3.953489e-06	1.071604e-05	1.501632e-05	-4.823436e+00	...	7	28779097	...	2.432321e-07
TCGA-D5-6537-01A-11D-1719-10	335	333	2	257	5.970149e-03	coding only	1	28835288	...	76	245	328	2.635659e-06	8.496534e-06	1.137495e-05	-4.944050e+00	...	5	28779097	...	1.737372e-07
TCGA-D5-6538-01A-11D-1719-10	306	301	5	214	1.633987e-02	coding only	1	28835288	...	87	204	304	3.017137e-06	7.074665e-06	1.054264e-05	-4.977051e+00	...	9	28779097	...	3.127270e-07
TCGA-D5-6539-01A-11D-1719-10	332	330	2	238	6.024096e-03	coding only	1	28835288	...	92	236	330	3.190535e-06	8.184416e-06	1.144431e-05	-4.941410e+00	...	0	28779097	...	0
TCGA-D5-6540-01A-11D-1719-10	1576	1544	32	1153	2.030457e-02	coding only	1	28835288	...	390	890	1560	1.352509e-05	3.086496e-05	5.410038e-05	-4.266800e+00	...	248	28779097	...	8.617366e-06
TCGA-D5-6541-01A-11D-1719-10	309	305	4	232	1.294498e-02	coding only	1	28835288	...	73	219	305	2.531620e-06	7.594861e-06	1.057732e-05	-4.975624e+00	...	9	28779097	...	3.127270e-07
TCGA-D5-6898-01A-11D-1924-10	133	132	1	94	7.518797e-03	coding only	1	28835288	...	38	88	132	1.317830e-06	3.051816e-06	4.577724e-06	-5.339350e+00	...	5	28779097	...	1.737372e-07
TCGA-D5-6920-01A-11D-1924-10	160	156	4	110	2.500000e-02	coding only	1	28835288	...	45	102	158	1.560588e-06	3.537332e-06	5.479397e-06	-5.261267e+00	...	7	28779097	...	2.432321e-07
TCGA-D5-6922-01A-11D-1924-10	206	203	3	141	1.456311e-02	coding only	1	28835288	...	60	134	202	2.080784e-06	4.647084e-06	7.005305e-06	-5.154573e+00	...	6	28779097	...	2.084847e-07
TCGA-D5-6923-01A-11D-1924-10	332	326	6	215	1.807229e-02	coding only	1	28835288	...	111	210	331	3.849450e-06	7.282743e-06	1.147899e-05	-4.940096e+00	...	4	28779097	...	1.389898e-07
TCGA-D5-6924-01A-11D-1924-10	229	227	2	163	8.733624e-03	coding only	1	28835288	...	64	151	223	2.219503e-06	5.236639e-06	7.733580e-06	-5.111619e+00	...	6	28779097	...	2.084847e-07
TCGA-D5-6926-01A-11D-1924-10	145	142	3	101	2.068966e-02	coding only	1	28835288	...	41	97	143	1.421869e-06	3.363934e-06	4.959201e-06	-5.304588e+00	...	3	28779097	...	1.042423e-07
TCGA-D5-6927-01A-21D-1924-10	796	774	22	592	2.763819e-02	coding only	1	28835288	...	178	455	781	6.172992e-06	1.577928e-05	2.708487e-05	-4.567273e+00	...	128	28779097	...	4.447673e-06
TCGA-D5-6928-01A-11D-1924-10	1549	1514	35	1148	2.259522e-02	coding only	1	28835288	...	362	996	1529	1.255406e-05	3.454101e-05	5.302531e-05	-4.275517e+00	...	138	28779097	...	4.795147e-06
TCGA-D5-6929-01A-31D-1924-10	253	248	5	186	1.976285e-02	coding only	1	28835288	...	61	178	252	2.115464e-06	6.172992e-06	8.739292e-06	-5.058524e+00	...	8	28779097	...	2.779795e-07
TCGA-D5-6930-01A-11D-1924-10	1373	1356	17	1006	1.238165e-02	coding only	1	28835288	...	346	808	1348	1.199919e-05	2.802122e-05	4.674828e-05	-4.330234e+00	...	178	28779097	...	6.185045e-06
TCGA-D5-6931-01A-11D-1924-10	399	392	7	291	1.754386e-02	coding only	1	28835288	...	101	279	394	3.502653e-06	9.675645e-06	1.366381e-05	-4.864428e+00	...	8	28779097	...	2.779795e-07
TCGA-D5-6932-01A-11D-1924-10	191	186	5	140	2.617801e-02	coding only	1	28835288	...	46	130	186	1.595268e-06	4.508365e-06	6.450430e-06	-5.190411e+00	...	6	28779097	...	2.084847e-07
TCGA-D5-7000-01A-11D-1924-10	178	178	0	120	0	coding only	1	28835288	...	58	112	176	2.011424e-06	3.884130e-06	6.103632e-06	-5.214412e+00	...	6	28779097	...	2.084847e-07
TCGA-DM-A0X9-01A-11D-A152-10	248	246	2	184	8.064516e-03	coding only	1	28835288	...	61	176	245	2.115464e-06	6.103632e-06	8.496534e-06	-5.070758e+00	...	6	28779097	...	2.084847e-07
TCGA-DM-A0XD-01A-12D-A152-10	272	271	1	197	3.676471e-03	coding only	1	28835288	...	74	186	270	2.566300e-06	6.450430e-06	9.363527e-06	-5.028561e+00	...	9	28779097	...	3.127270e-07
TCGA-DM-A0XF-01A-11D-A152-10	218	214	4	160	1.834862e-02	coding only	1	28835288	...	53	150	213	1.838026e-06	5.201959e-06	7.386782e-06	-5.131545e+00	...	5	28779097	...	1.737372e-07
TCGA-DM-A1D0-01A-11D-A152-10	171	170	1	120	5.847953e-03	coding only	1	28835288	...	50	113	169	1.733986e-06	3.918809e-06	5.860874e-06	-5.232038e+00	...	5	28779097	...	1.737372e-07
TCGA-DM-A1D4-01A-21D-A152-10	335	332	3	248	8.955224e-03	coding only	1	28835288	...	84	238	334	2.913097e-06	8.253776e-06	1.158303e-05	-4.936178e+00	...	9	28779097	...	3.127270e-07
TCGA-DM-A1D6-01A-21D-A152-10	283	282	1	196	3.533569e-03	coding only	1	28835288	...	85	191	280	2.947777e-06	6.623828e-06	9.710324e-06	-5.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-DM-A1D7-01A-11D-A152-10	215	209	6	143	2.790698e-02	coding only	1	28835288	...	66	140	215	2.288862e-06	4.855162e-06	7.456142e-06	-5.127486e+00	...	3	28779097	...	1.042423e-07
TCGA-DM-A1D8-01A-11D-A152-10	215	211	4	158	1.860465e-02	coding only	1	28835288	...	53	152	214	1.838026e-06	5.271319e-06	7.421462e-06	-5.129511e+00	...	5	28779097	...	1.737372e-07
TCGA-DM-A1D9-01A-11D-A152-10	219	214	5	153	2.283105e-02	coding only	1	28835288	...	61	140	218	2.115464e-06	4.855162e-06	7.560181e-06	-5.121468e+00	...	12	28779097	...	4.169693e-07
TCGA-DM-A1DA-01A-11D-A152-10	406	401	5	309	1.231527e-02	coding only	1	28835288	...	91	296	400	3.155855e-06	1.026520e-05	1.387189e-05	-4.857864e+00	...	8	28779097	...	2.779795e-07
TCGA-DM-A1DB-01A-11D-A152-10	312	307	5	209	1.602564e-02	coding only	1	28835288	...	97	206	310	3.363934e-06	7.144024e-06	1.075072e-05	-4.968563e+00	...	2	28779097	...	6.949488e-08
TCGA-DM-A1HA-01A-11D-A152-10	254	252	2	189	7.874016e-03	coding only	1	28835288	...	61	182	251	2.115464e-06	6.311711e-06	8.704612e-06	-5.060251e+00	...	6	28779097	...	2.084847e-07
TCGA-DM-A1HB-01A-21D-A183-10	1472	1450	22	1086	1.494565e-02	coding only	1	28835288	...	362	841	1458	1.255406e-05	2.916565e-05	5.056305e-05	-4.296167e+00	...	234	28779097	...	8.130901e-06
TCGA-DM-A282-01A-12D-A16V-10	175	173	2	118	1.142857e-02	coding only	1	28835288	...	53	111	173	1.838026e-06	3.849450e-06	5.999593e-06	-5.221878e+00	...	7	28779097	...	2.432321e-07
TCGA-DM-A285-01A-11D-A16V-10	221	218	3	164	1.357466e-02	coding only	1	28835288	...	53	159	219	1.838026e-06	5.514077e-06	7.594861e-06	-5.119480e+00	...	4	28779097	...	1.389898e-07
TCGA-DM-A28C-01A-11D-A16V-10	183	182	1	132	5.464481e-03	coding only	1	28835288	...	50	122	182	1.733986e-06	4.230927e-06	6.311711e-06	-5.199853e+00	...	9	28779097	...	3.127270e-07
TCGA-DM-A28E-01A-11D-A16V-10	169	165	4	121	2.366864e-02	coding only	1	28835288	...	43	113	167	1.491228e-06	3.918809e-06	5.791515e-06	-5.237208e+00	...	7	28779097	...	2.432321e-07
TCGA-DM-A28F-01A-11D-A16V-10	421	409	12	294	2.850356e-02	coding only	1	28835288	...	115	280	420	3.988169e-06	9.710324e-06	1.456549e-05	-4.836675e+00	...	13	28779097	...	4.517167e-07
TCGA-DM-A28G-01A-11D-A16V-10	255	252	3	173	1.176471e-02	coding only	1	28835288	...	79	167	253	2.739699e-06	5.791515e-06	8.773972e-06	-5.056804e+00	...	4	28779097	...	1.389898e-07
TCGA-DM-A28H-01A-11D-A16V-10	316	311	5	234	1.582278e-02	coding only	1	28835288	...	77	218	313	2.670339e-06	7.560181e-06	1.085476e-05	-4.964380e+00	...	12	28779097	...	4.169693e-07
TCGA-DM-A28K-01A-21D-A16V-10	251	247	4	181	1.593625e-02	coding only	1	28835288	...	66	173	250	2.288862e-06	5.999593e-06	8.669932e-06	-5.061984e+00	...	6	28779097	...	2.084847e-07
TCGA-F4-6459-01A-11D-1771-10	197	194	3	151	1.522843e-02	coding only	1	28835288	...	42	141	193	1.456549e-06	4.889842e-06	6.693188e-06	-5.174367e+00	...	8	28779097	...	2.779795e-07
TCGA-F4-6460-01A-11D-1771-10	304	302	2	231	6.578947e-03	coding only	1	28835288	...	71	224	301	2.462261e-06	7.768260e-06	1.043860e-05	-4.981358e+00	...	4	28779097	...	1.389898e-07
TCGA-F4-6569-01A-11D-1771-10	196	195	1	147	5.102041e-03	coding only	1	28835288	...	48	140	194	1.664627e-06	4.855162e-06	6.727868e-06	-5.172123e+00	...	5	28779097	...	1.737372e-07
TCGA-F4-6570-01A-11D-1771-10	1773	1727	46	1335	2.594473e-02	coding only	1	28835288	...	388	1049	1751	1.345574e-05	3.637904e-05	6.072421e-05	-4.216638e+00	...	270	28779097	...	9.381809e-06
TCGA-F4-6703-01A-11D-1835-10	500	489	11	349	2.200000e-02	coding only	1	28835288	...	137	331	494	4.751123e-06	1.147899e-05	1.713179e-05	-4.766197e+00	...	16	28779097	...	5.559591e-07
TCGA-F4-6704-01A-11D-1835-10	75	75	0	55	0	coding only	1	28835288	...	20	53	75	6.935946e-07	1.838026e-06	2.600980e-06	-5.584863e+00	...	2	28779097	...	6.949488e-08
TCGA-F4-6805-01A-11D-1835-10	82	80	2	57	2.439024e-02	coding only	1	28835288	...	23	55	80	7.976338e-07	1.907385e-06	2.774378e-06	-5.556834e+00	...	1	28779097	...	3.474744e-08
TCGA-F4-6806-01A-11D-1835-10	139	138	1	97	7.194245e-03	coding only	1	28835288	...	41	91	138	1.421869e-06	3.155855e-06	4.785803e-06	-5.320045e+00	...	5	28779097	...	1.737372e-07
TCGA-F4-6807-01A-11D-1835-10	203	199	4	152	1.970443e-02	coding only	1	28835288	...	46	145	197	1.595268e-06	5.028561e-06	6.831907e-06	-5.165458e+00	...	4	28779097	...	1.389898e-07
TCGA-F4-6808-01A-11D-1835-10	200	197	3	143	1.500000e-02	coding only	1	28835288	...	54	141	199	1.872705e-06	4.889842e-06	6.901266e-06	-5.161071e+00	...	0	28779097	...	0
TCGA-F4-6809-01A-11D-1835-10	190	187	3	142	1.578947e-02	coding only	1	28835288	...	45	134	188	1.560588e-06	4.647084e-06	6.519789e-06	-5.185766e+00	...	6	28779097	...	2.084847e-07
TCGA-F4-6854-01A-11D-1924-10	119	118	1	92	8.403361e-03	coding only	1	28835288	...	24	85	116	8.323135e-07	2.947777e-06	4.022849e-06	-5.395466e+00	...	6	28779097	...	2.084847e-07
TCGA-F4-6855-01A-11D-1924-10	137	134	3	93	2.189781e-02	coding only	1	28835288	...	41	87	136	1.421869e-06	3.017137e-06	4.716443e-06	-5.326385e+00	...	5	28779097	...	1.737372e-07
TCGA-F4-6856-01A-11D-1924-10	1172	1142	30	857	2.559727e-02	coding only	1	28835288	...	279	651	1155	9.675645e-06	2.257650e-05	4.005509e-05	-4.397342e+00	...	197	28779097	...	6.845246e-06
TCGA-G4-6293-01A-11D-1719-10	500	494	6	336	1.200000e-02	coding only	1	28835288	...	158	324	497	5.479397e-06	1.123623e-05	1.723583e-05	-4.763568e+00	...	9	28779097	...	3.127270e-07
TCGA-G4-6299-01A-11D-1771-10	301	298	3	212	9.966777e-03	coding only	1	28835288	...	86	199	299	2.982457e-06	6.901266e-06	1.036924e-05	-4.984253e+00	...	11	28779097	...	3.822219e-07
TCGA-G4-6303-01A-11D-1771-10	414	408	6	275	1.449275e-02	coding only	1	28835288	...	132	270	411	4.577724e-06	9.363527e-06	1.425337e-05	-4.846082e+00	...	3	28779097	...	1.042423e-07
TCGA-G4-6304-01A-11D-1924-10	920	911	9	667	9.782609e-03	coding only	1	28835288	...	239	630	909	8.288455e-06	2.184823e-05	3.152387e-05	-4.501360e+00	...	31	28779097	...	1.077171e-06
TCGA-G4-6306-01A-11D-1771-10	317	315	2	230	6.309148e-03	coding only	1	28835288	...	85	221	314	2.947777e-06	7.664220e-06	1.088944e-05	-4.962995e+00	...	6	28779097	...	2.084847e-07
TCGA-G4-6307-01A-11D-1719-10	361	356	5	262	1.385042e-02	coding only	1	28835288	...	93	256	359	3.225215e-06	8.878011e-06	1.245002e-05	-4.904830e+00	...	5	28779097	...	1.737372e-07
TCGA-G4-6309-01A-21D-1835-10	1017	998	19	755	1.868240e-02	coding only	1	28835288	...	238	587	1005	8.253776e-06	2.035700e-05	3.485313e-05	-4.457758e+00	...	161	28779097	...	5.594338e-06
TCGA-G4-6310-01A-11D-1719-10	319	317	2	206	6.269592e-03	coding only	1	28835288	...	109	202	316	3.780091e-06	7.005305e-06	1.095879e-05	-4.960237e+00	...	3	28779097	...	1.042423e-07
TCGA-G4-6315-01A-11D-1719-10	386	382	4	275	1.036269e-02	coding only	1	28835288	...	107	266	384	3.710731e-06	9.224808e-06	1.331702e-05	-4.875593e+00	...	7	28779097	...	2.432321e-07
TCGA-G4-6317-01A-11D-1719-10	290	286	4	212	1.379310e-02	coding only	1	28835288	...	74	204	287	2.566300e-06	7.074665e-06	9.953082e-06	-5.002042e+00	...	5	28779097	...	1.737372e-07
TCGA-G4-6321-01A-11D-1719-10	315	311	4	223	1.269841e-02	coding only	1	28835288	...	85	219	310	2.947777e-06	7.594861e-06	1.075072e-05	-4.968563e+00	...	2	28779097	...	6.949488e-08
TCGA-G4-6323-01A-11D-1719-10	272	268	4	185	1.470588e-02	coding only	1	28835288	...	82	181	270	2.843738e-06	6.277031e-06	9.363527e-06	-5.028561e+00	...	3	28779097	...	1.042423e-07
TCGA-G4-6586-01A-11D-1771-10	1515	1489	26	1133	1.716172e-02	coding only	1	28835288	...	352	856	1496	1.220726e-05	2.968585e-05	5.188088e-05	-4.284993e+00	...	262	28779097	...	9.103830e-06
TCGA-G4-6588-01A-11D-1771-10	2594	2541	53	1908	2.043177e-02	coding only	1	28835288	...	623	1466	2549	2.160547e-05	5.084048e-05	8.839863e-05	-4.053554e+00	...	413	28779097	...	1.435069e-05
TCGA-G4-6625-01A-21D-1771-10	237	235	2	169	8.438819e-03	coding only	1	28835288	...	66	161	234	2.288862e-06	5.583437e-06	8.115057e-06	-5.090708e+00	...	5	28779097	...	1.737372e-07
TCGA-G4-6626-01A-11D-1771-10	450	448	2	306	4.444444e-03	coding only	1	28835288	...	140	299	444	4.855162e-06	1.036924e-05	1.539780e-05	-4.812541e+00	...	4	28779097	...	1.389898e-07
TCGA-G4-6628-01A-11D-1835-10	2115	2074	41	1551	1.938534e-02	coding only	1	28835288	...	516	1200	2083	1.789474e-05	4.161568e-05	7.223788e-05	-4.141235e+00	...	326	28779097	...	1.132767e-05
