
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/45/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/45/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/DLBC-TP/22318423/DLBC-TP.meth.by_max_stddev.data.txt", "-u12661", "-oDLBC-TP")
Cluster size 12661 broken into 8021 4640 
Cluster size 8021 broken into 4768 3253 
Cluster size 4768 broken into 2994 1774 
Cluster size 2994 broken into 1806 1188 
Cluster size 1806 broken into 1049 757 
Done cluster 1049 
Done cluster 757 
Done cluster 1806 
Done cluster 1188 
Done cluster 2994 
Cluster size 1774 broken into 699 1075 
Done cluster 699 
Done cluster 1075 
Done cluster 1774 
Done cluster 4768 
Cluster size 3253 broken into 2022 1231 
Cluster size 2022 broken into 1126 896 
Done cluster 1126 
Done cluster 896 
Done cluster 2022 
Done cluster 1231 
Done cluster 3253 
Done cluster 8021 
Cluster size 4640 broken into 1855 2785 
Cluster size 1855 broken into 975 880 
Done cluster 975 
Done cluster 880 
Done cluster 1855 
Cluster size 2785 broken into 1766 1019 
Cluster size 1766 broken into 1350 416 
Done cluster 1350 
Done cluster 416 
Done cluster 1766 
Done cluster 1019 
Done cluster 2785 
Done cluster 4640 
> q(save="no")
