gene1	gene2	pval	qval
COL3A1	SLC38A4	0.000101	1
DSG3	FLT1	0.000101	1
FGFR2	NAP1L2	0.000103	1
ALPK2	MYO3B	0.000105	1
BTK	DCLK3	0.000107	1
10q-Del	Amp_8q24.21	0.000107	1
ARID2	TPTE	0.000109	1
Del_1p22.1	Del_10q23.31	0.000109	1
ANO4	RPTN	0.000111	1
KCND2	NBPF1	0.000111	1
ALPK2	ARID2	0.000112	1
ALPK2	SELP	0.000112	1
C7orf58	MAN1A1	0.000112	1
DCLK3	SLC9A11	0.000112	1
NBPF1	SLC9A11	0.000112	1
COL3A1	RELN	0.000113	1
CYP3A4	POTEG	0.000117	1
ALPK2	TP63	0.000118	1
CTNNA3	MSTN	0.000118	1
10q-Del	Del_5q31.3	0.000119	1
6q-Del	Del_10q21.1	0.000119	1
PDGFRA	XIRP2	0.00012	1
10q-Del	Del_16p13.3	0.00012	1
COL3A1	DCLK3	0.000121	1
7q-Amp	Del_9p21.3	0.000122	1
Amp_1q21.3	Amp_17q25.3	0.000123	1
9q-Del	Del_16q23.1	0.000125	1
ACSBG1	HSD11B1	0.000126	1
KEL	SLC38A4	0.000126	1
PARM1	THSD7B	0.000127	1
ARID2	EPHA6	0.000128	1
CNTN5	RPTN	0.000129	1
Del_5q31.3	Del_12q23.3	0.000132	1
DSG3	MYO3B	0.000136	1
EPHA6	XIRP2	0.000136	1
9q-Del	Del_2q37.3	0.000137	1
Amp_12q15	Del_12q23.3	0.000139	1
EPHA7	PDGFRA	0.00014	1
PTPN11	XIRP2	0.00014	1
RELN	RPTN	0.000141	1
10p-Del	18p-Del	0.000141	1
RPTN	SLC38A4	0.000142	1
ALPK2	PDGFRA	0.000148	1
ALPK2	TRERF1	0.000148	1
MAN1A1	TP63	0.000152	1
Del_5q12.1	Del_12q23.3	0.000154	1
FLT1	SLC9A11	0.000155	1
1q-Amp	Amp_6p24.3	0.00016	1
18p-Del	Del_10q26.3	0.000164	1
CAMTA1	USP9X	0.000165	1
FAM58A	NF1	0.000165	1
KCND2	STK19	0.000165	1
Del_6q21	Del_12q23.3	0.000168	1
MPP7	SLC9A11	0.000169	1
KEL	MYO3B	0.00017	1
ANO4	TTN	0.000173	1
6p-Amp	Amp_1q44	0.000176	1
ACSBG1	XIRP2	0.000177	1
RELN	TTN	0.000177	1
ARID2	THSD7B	0.000179	1
TP53	TPTE	0.000179	1
10q-Del	14q-Del	0.00018	1
ANO4	CNTN5	0.000181	1
APC	CDC42BPA	0.000186	1
CCNA1	PTPN22	0.000186	1
Amp_20q13.33	Amp_22q13.2	0.000189	1
Amp_1q21.3	Del_6q26	0.000195	1
Del_10q23.31	Del_15q13.3	0.000198	1
EPHA7	TTN	0.000204	1
Del_12q23.3	Del_15q21.1	0.000204	1
DCLK3	MYO16	0.000205	1
DCLK3	SELP	0.000205	1
DCLK3	SLC38A4	0.000205	1
FGFR2	SELP	0.000205	1
POTEG	SELP	0.000205	1
DCLK3	FGFR2	0.000209	1
COL3A1	NF1	0.00021	1
6q-Del	Del_10q23.31	0.000211	1
9p-Del	Del_16q23.1	0.000211	1
PTEN	Del_10q23.31	0.000212	1
Del_10q21.1	Del_16q24.3	0.000217	1
FLT1	NAP1L2	0.000218	1
CAMTA1	COL3A1	0.000219	1
FRMPD4	TP63	0.000221	1
11q-Del	Del_6q26	0.000221	1
Del_10q23.31	Del_11q23.3	0.000221	1
COL3A1	USP17L2	0.000222	1
PTPN22	THSD7B	0.000227	1
Del_10q26.3	Del_14q23.3	0.000228	1
MLL	XIRP2	0.000232	1
DCLK3	MLL	0.000233	1
ALPK2	FGFR2	0.000235	1
DCLK3	KRT73	0.000235	1
DCLK3	RIPK4	0.000235	1
KRT73	NBPF1	0.000235	1
10p-Del	11p-Del	0.000235	1
11q-Del	Del_10q23.31	0.000236	1
10q-Del	Del_14q23.3	0.000243	1
10q-Del	Del_11q23.3	0.000248	1
9q-Del	Del_12q23.3	0.000252	1
RPTN	USP17L2	0.000253	1
CNTN5	CPA3	0.000254	1
CNTN5	CYP3A4	0.000254	1
PTPN22	RPTN	0.000254	1
ALPK2	CYP3A4	0.000265	1
C10orf54	FAM58A	0.000268	1
CYP3A4	USH2A	0.000271	1
10p-Del	Del_12q23.3	0.000273	1
NAP1L2	XIRP2	0.000275	1
18p-Del	Del_10p15.3	0.000278	1
MPP7	TTN	0.000284	1
11p-Del	Del_16q23.1	0.000287	1
Del_6q26	Del_16q23.1	0.000289	1
KEL	TPTE	0.000293	1
DSG3	POTEG	0.000295	1
FGFR2	TP53	0.000295	1
FRMPD4	NF1	0.000298	1
10q-Del	18p-Del	0.000301	1
KYNU	TP63	0.000302	1
MPP7	MYO3B	0.000308	1
11p-Del	Amp_1p12	0.00031	1
Del_6q21	Del_16q23.1	0.000313	1
GLI1	MSTN	0.000314	1
Amp_7p22.1	Del_9p21.3	0.000316	1
SLC9A11	TTN	0.000319	1
PTEN	10q-Del	0.00032	1
Del_1p22.1	Del_19p13.3	0.000323	1
FRMPD4	OXA1L	0.000324	1
10q-Del	Del_15q21.1	0.000327	1
14q-Del	6p-Del	0.000331	1
NRAS	17p-Del	0.000332	1
COL3A1	TP63	0.000333	1
Del_10p15.3	Del_11q23.3	0.000341	1
Amp_1q44	Del_11q23.3	0.000343	1
ANO4	TP63	0.000344	1
11p-Del	Del_5q31.3	0.000347	1
Del_3q13.31	Del_10q26.3	0.000347	1
C7orf58	USP9X	0.00035	1
Del_10q26.3	Del_12q23.3	0.000353	1
ANO4	USH2A	0.000357	1
KEL	ZNF780B	0.000357	1
Del_5p15.31	Del_9p23	0.000357	1
16q-Del	9q-Del	0.000359	1
IGF1R	USP9X	0.000362	1
CNTN5	MYO3B	0.000364	1
NAP1L2	NF1	0.000364	1
5q-Del	Del_9p21.3	0.000366	1
EPHA6	MSTN	0.000367	1
EPHA6	SLC27A5	0.000367	1
EPHA6	ZNF780B	0.000367	1
CDKN2A	RELN	0.00037	1
EPHA7	GUCY2F	0.000374	1
11q-Del	Del_10q21.1	0.000375	1
EZH2	RPTN	0.000378	1
9q-Del	Del_11q23.3	0.000379	1
Amp_8q24.21	Del_10q23.31	0.000379	1
Amp_1q44	Amp_7p22.1	0.00038	1
COL3A1	FLT1	0.000381	1
COL3A1	KEL	0.000381	1
Del_8p23.3	Del_9p21.3	0.000381	1
18p-Del	Del_14q23.3	0.000384	1
ANO4	ARID2	0.000388	1
FLT1	THSD7B	0.000388	1
6p-Amp	Amp_13q31.3	0.000391	1
Del_10q23.31	Del_15q21.1	0.000392	1
DCLK3	FRMPD4	0.000394	1
FGFR2	MYO3B	0.000394	1
KCND2	TTN	0.000394	1
PDGFRA	SLC9A11	0.000407	1
6p-Amp	8p-Amp	0.000407	1
10q-Del	Del_16q24.3	0.000409	1
DSG3	EPHA6	0.000411	1
FLT1	RPTN	0.000414	1
ANO4	CAMTA1	0.000415	1
Del_4q34.3	Del_10q23.31	0.000417	1
Amp_7p22.1	Del_14q23.3	0.000427	1
CTNNA3	MPP7	0.000428	1
10q-Del	16q-Del	0.000428	1
ANO4	MYO3B	0.00043	1
20q-Amp	Amp_1q21.3	0.000432	1
NUP214	SLC9A11	0.000434	1
DSG3	MLL	0.000436	1
ANO4	ATP5F1	0.000438	1
1q-Amp	8q-Amp	0.000439	1
16q-Del	Del_10q23.31	0.00044	1
6p-Amp	Amp_8q24.21	0.000442	1
Del_11q23.3	Del_12q23.3	0.000443	1
MLL	NF1	0.000445	1
STK19	TP53	0.000447	1
POTEG	THSD7B	0.00045	1
11p-Del	Del_12q23.3	0.000453	1
Del_10q23.31	Del_19p13.3	0.000458	1
C7orf58	KCND2	0.000459	1
NBPF1	TP63	0.000459	1
CTNNA3	XIRP2	0.000463	1
EPHA6	PARM1	0.000465	1
DCLK3	FLT1	0.000468	1
Del_10q26.3	Del_16q24.3	0.000473	1
Amp_6p24.3	Del_6q21	0.000476	1
Del_10q23.31	Del_12q23.3	0.000477	1
Del_6q26	Del_16q24.3	0.000481	1
CDC42BPA	COL3A1	0.000483	1
COL3A1	KRT73	0.000483	1
MSTN	NF1	0.000492	1
Del_10q26.3	Del_15q13.3	0.000493	1
9p-Del	Amp_8q24.21	0.000496	1
DSG3	TTN	0.000502	1
APC	KCND2	0.000503	1
EPHA6	SLC38A4	0.000504	1
ALPK2	CAMTA1	0.000514	1
CNTN5	COL3A1	0.000519	1
KRT73	SLC9A11	0.000519	1
16q-Del	9p-Del	0.000519	1
9p-Del	Del_19p13.3	0.000525	1
Del_10p15.3	Del_12q23.3	0.000528	1
1q-Amp	Amp_8q24.21	0.000532	1
Del_5q31.3	Del_6q21	0.000532	1
Del_11q23.3	Del_19p13.3	0.000536	1
14q-Del	Del_10q26.3	0.00054	1
Del_5q12.1	Del_10q26.3	0.00054	1
EPHA6	PTPN22	0.000548	1
6q-Del	Del_16q24.3	0.000549	1
CAMTA1	LGR6	0.000551	1
1q-Amp	Amp_22q13.2	0.000552	1
ARID2	USH2A	0.000553	1
C7orf58	USH2A	0.000553	1
14q-Del	Del_10q21.1	0.000553	1
NAP1L2	TPTE	0.000557	1
SLC9A11	THSD7B	0.000557	1
13q-Amp	6p-Amp	0.00056	1
Del_10q21.1	Del_14q23.3	0.000576	1
Del_10q21.1	Del_16q12.1	0.000576	1
CNTN5	DCLK3	0.000584	1
CNTN5	EPHA7	0.000586	1
CNTN5	MYO16	0.000586	1
CNTN5	SLC38A4	0.000586	1
1q-Amp	20q-Amp	0.000588	1
10q-Del	Del_12q23.3	0.000601	1
EPHA6	S100A8	0.000604	1
Del_16q24.3	Del_19p13.3	0.000606	1
CAMTA1	EPHA7	0.000607	1
NAP1L2	SELP	0.000607	1
NAP1L2	SLC38A4	0.000607	1
ANO4	NUP214	0.000608	1
STK19	TP63	0.000609	1
FGFR2	SLC9A11	0.00061	1
Del_14q23.3	Del_19p13.3	0.000612	1
KEL	TTN	0.000613	1
KEL	NF1	0.000615	1
EPHA7	OXA1L	0.000623	1
MYO16	S100A8	0.000623	1
OXA1L	SLC38A4	0.000623	1
COL3A1	MAN1A1	0.000624	1
COL3A1	NUP214	0.000624	1
MYO3B	SYK	0.000627	1
DSG3	TPTE	0.00063	1
Del_4p16.3	Del_16q23.1	0.000635	1
DSG3	TP63	0.000638	1
TP53	TP63	0.000638	1
CYP3A4	RELN	0.000641	1
Del_9p23	Del_16q23.1	0.000646	1
11p-Del	14q-Del	0.000652	1
11p-Del	Del_5q12.1	0.000652	1
14q-Del	Amp_7p22.1	0.000653	1
Amp_1q44	Del_6q26	0.000655	1
Del_9p21.3	Del_19p13.3	0.000667	1
PARM1	USH2A	0.000668	1
11q-Del	Del_10p15.3	0.00067	1
EPHA7	TP53	0.00068	1
MYO16	TP53	0.00068	1
EPHA4	THSD7B	0.000684	1
Del_5q31.3	Del_6q26	0.000687	1
8q-Amp	Del_10q21.1	0.000688	1
5q-Del	Del_10q21.1	0.000688	1
9q-Del	Del_16q24.3	0.000696	1
EPHA4	RIPK4	0.000697	1
Amp_1q21.3	Amp_6p24.3	0.000697	1
Amp_1q21.3	Amp_20q13.33	0.000697	1
Del_13q34	Del_16q24.3	0.000698	1
Del_15q21.1	Del_16p13.3	0.000698	1
DCLK3	KCND2	0.000699	1
FGFR2	KCND2	0.000699	1
CNTN5	EPHA6	0.000703	1
Del_12q23.3	Del_16q23.1	0.000713	1
ALPK2	MAN1A1	0.000715	1
Del_10q21.1	Del_12q23.3	0.000723	1
Del_10q26.3	Del_11q23.3	0.000725	1
GUCY2F	KEL	0.000728	1
DCLK3	NAP1L2	0.000731	1
NAP1L2	POTEG	0.000731	1
PDGFRA	ZNF780B	0.000731	1
FRMPD4	MYO3B	0.000732	1
MYO16	XIRP2	0.000746	1
Del_4p16.3	Del_16q24.3	0.000746	1
PTEN	Del_10q26.3	0.00075	1
7q-Amp	Del_14q23.3	0.00075	1
FLT1	TP63	0.000756	1
KEL	TP63	0.000756	1
Del_16q23.1	Del_19p13.3	0.000758	1
PARM1	RAC1	0.000759	1
6q-Del	Del_4q34.3	0.00076	1
Del_10q26.3	Del_16q12.1	0.000768	1
6p-Amp	Amp_15q26.2	0.000769	1
NBPF1	NF1	0.000771	1
KCND2	MYO16	0.000777	1
ALPK2	PTPN22	0.000782	1
CDC42BPA	EPHA7	0.000782	1
CDKN2A	TTN	0.000782	1
KRT73	SLC38A4	0.000782	1
10p-Del	Del_16p13.3	0.000783	1
NUP214	OR4S2	0.000785	1
Del_1p22.1	Del_4p16.3	0.000785	1
KEL	NUP214	0.000793	1
18p-Del	Del_9p21.3	0.000795	1
ATP5F1	FGFR2	0.000798	1
EPHA6	RAC1	0.000798	1
ALPK2	RIPK4	0.000808	1
EPHA6	USH2A	0.000814	1
FRMPD4	RPTN	0.000814	1
Del_11q23.3	Del_16q24.3	0.000815	1
CNTN5	TPTE	0.000819	1
18p-Del	Del_6q26	0.00082	1
NUP214	ZNF780B	0.000823	1
DSG3	RPTN	0.000826	1
ARID2	NF1	0.000827	1
Del_4p16.3	Del_8p23.3	0.00083	1
APC	NUP214	0.000836	1
RAC1	SYK	0.000842	1
MAN1A1	THSD7B	0.000843	1
NUP214	THSD7B	0.000843	1
RELN	SLC38A4	0.000846	1
Amp_12q14.1	Del_15q13.3	0.000848	1
EPHA7	TRERF1	0.000854	1
KCND2	XIRP2	0.000856	1
20q-Amp	8p-Amp	0.000856	1
7p-Amp	Del_14q23.3	0.000861	1
ARID2	EPHA7	0.000869	1
C7orf58	MYO16	0.000869	1
9p-Del	Del_16q24.3	0.000871	1
Del_4q34.3	Del_19p13.3	0.000879	1
DCLK3	ZNF780B	0.000883	1
KRT73	USP17L2	0.000883	1
RIPK4	USP17L2	0.000883	1
RPTN	SLC27A5	0.000886	1
ARID2	GUCY2F	0.000894	1
CAMTA1	RPTN	0.000911	1
FGFR2	MPP7	0.000913	1
Del_10q21.1	Del_16q23.1	0.00092	1
Del_9p21.3	Del_15q13.3	0.000932	1
CAMTA1	TP63	0.00094	1
NAP1L2	TP63	0.00094	1
Del_4q34.3	Del_9p21.3	0.000944	1
CTNNA3	RELN	0.000947	1
Del_8p23.3	Del_9p23	0.000949	1
11q-Del	Del_16q12.1	0.00095	1
Amp_7p22.1	Del_6q21	0.000951	1
C7orf58	IDH1	0.000952	1
6p-Del	Del_14q23.3	0.000958	1
11p-Del	16q-Del	0.000965	1
ARID2	SLC9A11	0.00097	1
ALPK2	TP53	0.000979	1
Amp_6p24.3	Del_6q26	0.000979	1
10p-Del	Del_5q31.3	0.000987	1
CDC42BPA	IGF1R	0.000999	1
GLI1	SYK	0.000999	1
THSD7B	TRERF1	0.001	1
TP63	XIRP2	0.001	1
CNTN5	USH2A	0.00102	1
EPHA4	TRERF1	0.00102	1
11p-Del	9q-Del	0.00102	1
GML	NAP1L2	0.00103	1
1q-Amp	Del_6q26	0.00103	1
Amp_1p12	Del_10p15.3	0.00103	1
DCLK3	NUP214	0.00104	1
EPHA7	MPP7	0.00104	1
KCND2	USH2A	0.00105	1
MYO3B	PARM1	0.00105	1
Del_4q34.3	Del_10q26.3	0.00105	1
COL3A1	NAP1L2	0.00106	1
COL3A1	USH2A	0.00107	1
9q-Del	Del_13q34	0.00107	1
RPTN	SLC9A11	0.00108	1
Amp_8q24.21	Del_9p21.3	0.00108	1
NF1	PARM1	0.00109	1
KEL	LGR6	0.0011	1
Del_10q23.31	Del_14q23.3	0.0011	1
16q-Del	6q-Del	0.00111	1
Del_9p23	Del_16q12.1	0.00111	1
NUP214	TP63	0.00113	1
SLC38A4	SLC9A11	0.00113	1
ALPK2	KCND2	0.00114	1
NF1	ZFX	0.00114	1
FLT1	USH2A	0.00115	1
16q-Del	Del_10q26.3	0.00115	1
ANO4	FLT1	0.00116	1
MSTN	SLC9A11	0.00116	1
SLC9A11	ZNF780B	0.00116	1
ARID2	MYO3B	0.00118	1
EPHA7	NBPF1	0.00118	1
FGFR2	SLC38A4	0.00118	1
THSD7B	TPTE	0.00118	1
20q-Amp	Amp_1q44	0.00118	1
7q-Amp	Del_4q34.3	0.00118	1
11q-Del	Amp_1p12	0.00118	1
11q-Del	Del_15q13.3	0.00118	1
10p-Del	6q-Del	0.00119	1
11q-Del	Del_1p22.1	0.00121	1
6q-Del	Del_16q23.1	0.00121	1
C15orf23	COL3A1	0.00122	1
CDC42BPA	TP63	0.00122	1
RIPK4	TP63	0.00122	1
8q-Amp	10q-Del	0.00122	1
SELP	USP17L2	0.00123	1
SLC38A4	USP17L2	0.00123	1
Del_1p22.1	Del_13q34	0.00124	1
Del_4p16.3	Del_12q23.3	0.00124	1
SLC38A4	TPTE	0.00125	1
Amp_1q44	Amp_6p24.3	0.00125	1
C10orf54	NF1	0.00126	1
CNTN5	GLI1	0.00126	1
NF1	OXA1L	0.00126	1
CTNNA3	KEL	0.00127	1
Del_10p15.3	Del_16p13.3	0.00127	1
KCND2	MYO3B	0.00128	1
Del_6q21	Del_16q24.3	0.00128	1
Del_10q26.3	Del_16q23.1	0.00128	1
ANO4	CYP3A4	0.00129	1
ANO4	LGR6	0.00129	1
CBL	SLC38A4	0.00129	1
CNTN5	TP53	0.00129	1
Amp_11q13.3	Del_11q23.3	0.00129	1
Del_9p23	Del_19p13.3	0.00129	1
CDC42BPA	FLT1	0.0013	1
FLT1	KRT73	0.0013	1
Del_1p22.1	Del_10p15.3	0.0013	1
CDKN2A	XIRP2	0.00131	1
20q-Amp	Amp_22q13.2	0.00131	1
9p-Del	Del_16q12.1	0.00131	1
DCLK3	NBPF1	0.00132	1
FGFR2	POTEG	0.00132	1
10q-Del	Del_16q23.1	0.00132	1
CPA3	TTN	0.00133	1
EPHA7	SYK	0.00133	1
ATP5F1	XIRP2	0.00134	1
C7orf58	DDX3X	0.00135	1
ACSBG1	USP17L2	0.00136	1
RB1	13q-Amp	0.00136	1
1q-Amp	Amp_13q31.3	0.00136	1
Del_15q13.3	Del_16q23.1	0.00136	1
RIPK4	STK19	0.00137	1
6q-Del	Del_10p15.3	0.00137	1
THSD7B	USP17L2	0.00138	1
Del_1p22.1	Del_16p13.3	0.00138	1
CPA3	EPHA4	0.00139	1
MAN1A1	PARM1	0.00139	1
17p-Del	Del_14q23.3	0.00139	1
CDKN2A	THSD7B	0.0014	1
PDGFRA	USP17L2	0.0014	1
CPA3	USH2A	0.00141	1
DCLK3	TP53	0.00141	1
KCND2	TP53	0.00141	1
RAC1	USH2A	0.00141	1
11p-Del	18p-Del	0.00141	1
APC	TP63	0.00142	1
C7orf58	MLL	0.00142	1
MLL	TPTE	0.00142	1
TP63	TRERF1	0.00142	1
14q-Del	17p-Del	0.00142	1
DCLK3	TTN	0.00143	1
FGFR2	TTN	0.00143	1
Del_1p36.31	Del_10q23.31	0.00144	1
ALPK2	TPTE	0.00146	1
7p-Amp	18p-Del	0.00146	1
8q-Amp	Del_15q21.1	0.00146	1
10q-Del	11p-Del	0.00146	1
Del_6q26	Del_19p13.3	0.00146	1
ALPK2	KEL	0.00147	1
1q-Amp	Amp_17q25.3	0.00147	1
DSG3	SLC9A11	0.00149	1
C10orf28	PTPN22	0.0015	1
MYO3B	NF1	0.0015	1
Amp_7p22.1	Del_4q34.3	0.0015	1
DCLK3	DMC1	0.00151	1
EPHA6	MLL	0.00151	1
C7orf58	KRT73	0.00152	1
CDKN2A	DCLK3	0.00152	1
SELP	TTN	0.00153	1
SLC38A4	TTN	0.00153	1
ALPK2	LGR6	0.00154	1
ALPK2	RAC1	0.00154	1
DDX3X	Amp_20q13.33	0.00154	1
Del_10q26.3	Del_19p13.3	0.00155	1
ARID2	CAMTA1	0.00156	1
FLT1	KEL	0.00156	1
POTEG	USH2A	0.00157	1
18p-Del	Del_10q21.1	0.00157	1
BTK	XIRP2	0.00158	1
MAN1A1	MYO3B	0.00158	1
KCND2	RPTN	0.00159	1
MAN1A1	MLL	0.00159	1
USP9X	XIRP2	0.00159	1
Amp_4q12	Amp_5p15.33	0.00159	1
ALPK2	MPP7	0.0016	1
CAMTA1	CTNNA3	0.00162	1
EPHA4	FLT1	0.00162	1
17p-Del	Del_10p15.3	0.00162	1
7p-Amp	14q-Del	0.00163	1
EPHA6	NAP1L2	0.00164	1
CAMTA1	GLI1	0.00167	1
CAMTA1	RIPK4	0.00167	1
KRT73	NAP1L2	0.00167	1
MLL	TP53	0.00167	1
8q-Amp	10p-Del	0.00167	1
11p-Del	17p-Del	0.00167	1
7q-Amp	14q-Del	0.00168	1
ALPK2	ZNF780B	0.0017	1
18p-Del	Del_12q23.3	0.00173	1
APC	FLT1	0.00174	1
FLT1	TRERF1	0.00174	1
KEL	PTPN22	0.00174	1
Del_11q23.3	Del_13q34	0.00174	1
CDC42BPA	NF1	0.00177	1
COL3A1	MYO16	0.00177	1
KRT73	NF1	0.00177	1
Del_9p23	Del_15q13.3	0.00177	1
ANO4	SLC38A4	0.00178	1
CDC42BPA	EPHA6	0.00178	1
MPP7	USH2A	0.00178	1
16q-Del	Del_6q26	0.00178	1
CYP3A4	NUP214	0.00179	1
DCLK3	USP17L2	0.0018	1
10p-Del	16q-Del	0.0018	1
Del_10q23.31	Del_16q23.1	0.00181	1
CDC42BPA	MAN1A1	0.00182	1
CDKN2A	PTPN11	0.00182	1
CDKN2A	RPTN	0.00182	1
CPA3	TP53	0.00182	1
KIT	Amp_4q12	0.00182	1
1q-Amp	Amp_20q13.33	0.00182	1
Del_6q21	Del_16q12.1	0.00183	1
C7orf58	XIRP2	0.00184	1
10q-Del	Del_15q13.3	0.00184	1
Del_5q12.1	Del_10q21.1	0.00184	1
BTK	CDKN2A	0.00186	1
NF1	TTN	0.00186	1
RELN	USP17L2	0.00186	1
Amp_20q13.33	Del_11q23.3	0.00186	1
CTNNA3	CYP3A4	0.00188	1
CTNNA3	LGR6	0.00188	1
PARM1	TTN	0.00188	1
10p-Del	Del_3q13.31	0.00188	1
6q-Del	Del_19p13.3	0.00189	1
NAP1L2	USH2A	0.0019	1
MSTN	TP53	0.00191	1
11q-Del	Amp_7p22.1	0.00191	1
6p-Del	Del_9p23	0.00191	1
Del_4p16.3	Del_19p13.3	0.00191	1
CTNNA3	ZFX	0.00192	1
HSD11B1	USH2A	0.00192	1
13q-Amp	Amp_15q26.2	0.00193	1
16q-Del	Del_15q13.3	0.00193	1
COL3A1	DSG3	0.00194	1
Del_9p21.3	Del_16q23.1	0.00194	1
CDC42BPA	USH2A	0.00196	1
PTPN22	TTN	0.00197	1
11p-Del	Del_1p22.1	0.00197	1
FLT1	OR4S2	0.00198	1
KEL	OR4S2	0.00198	1
SLC9A11	TRERF1	0.00198	1
5q-Del	Del_10q26.3	0.00198	1
ANO4	EPHA4	0.00199	1
CNTN5	FLT1	0.002	1
EPHA6	MYO16	0.00201	1
HSD11B1	USP17L2	0.00201	1
SLC27A5	THSD7B	0.00201	1
GLI1	PDGFRA	0.00202	1
8q-Amp	Del_10q23.31	0.00202	1
Del_10q23.31	Del_16q24.3	0.00202	1
ARID2	KEL	0.00203	1
CTNNA3	NF1	0.00204	1
11p-Del	Del_13q34	0.00204	1
Del_5q31.3	Del_14q23.3	0.00204	1
ATP5F1	NUP214	0.00206	1
FAM58A	MAN1A1	0.00206	1
NRAS	Amp_1q44	0.00206	1
17p-Del	Del_3q13.31	0.00206	1
8q-Amp	Amp_1q44	0.00207	1
ANO4	RELN	0.0021	1
Del_5q31.3	Del_10q23.31	0.0021	1
TP53	TTN	0.00211	1
COL3A1	CTNNA3	0.00212	1
KCND2	TP63	0.00212	1
EPHA7	FRMPD4	0.00213	1
EPHA7	STK19	0.00214	1
HSD11B1	SLC38A4	0.00214	1
ARID2	TRERF1	0.00217	1
C7orf58	TRERF1	0.00217	1
CTNNA3	TRERF1	0.00217	1
MAN1A1	RPTN	0.00217	1
MSTN	PARM1	0.00218	1
FLT1	SYK	0.00219	1
9p-Del	Del_5p15.31	0.0022	1
GUCY2F	RPTN	0.00225	1
DCLK3	OR4S2	0.00226	1
DCLK3	USP9X	0.00226	1
NBPF1	USP9X	0.00226	1
APC	XIRP2	0.00227	1
1q-Amp	6p-Amp	0.00227	1
11p-Del	Del_10q23.31	0.00228	1
CDKN2A	COL3A1	0.00229	1
FLT1	USP17L2	0.00232	1
KEL	USP17L2	0.00232	1
14q-Del	Del_16q12.1	0.00232	1
MSTN	SLC38A4	0.00236	1
Del_14q23.3	Del_16q12.1	0.00236	1
CNTN5	S100A8	0.00237	1
CPA3	17p-Del	0.00237	1
DDX3X	20q-Amp	0.00237	1
CNTN5	NBPF1	0.00238	1
FGFR2	FLT1	0.00238	1
FLT1	NBPF1	0.00238	1
CAMTA1	PTPN11	0.00241	1
TP63	ZNF780B	0.00241	1
16q-Del	Del_6q21	0.00241	1
ALPK2	NAP1L2	0.00243	1
CDC42BPA	NBPF1	0.00243	1
FGFR2	KRT73	0.00243	1
SLC9A11	TP63	0.00243	1
14q-Del	Del_10q23.31	0.00244	1
6p-Del	Del_5q31.3	0.00245	1
ARID2	TTN	0.00247	1
GUCY2F	TPTE	0.00247	1
PARM1	TPTE	0.00247	1
RB1	Amp_13q31.3	0.00247	1
10q-Del	Del_16q12.1	0.00247	1
EPHA6	TP63	0.00248	1
CPA3	TP63	0.0025	1
OXA1L	XIRP2	0.0025	1
10q-Del	5q-Del	0.00252	1
Del_8p23.3	Del_11q23.3	0.00252	1
TP53	USH2A	0.00253	1
11p-Del	Del_10q21.1	0.00253	1
ATP5F1	FLT1	0.00254	1
Del_12q23.3	Del_16q12.1	0.0026	1
17p-Del	Del_10q26.3	0.00262	1
Del_4q34.3	Del_10p15.3	0.00265	1
NF1	TRERF1	0.00267	1
5q-Del	Del_10q23.31	0.00267	1
CYP3A4	MSTN	0.00268	1
LGR6	MSTN	0.00268	1
CAMTA1	TTN	0.00269	1
NAP1L2	TTN	0.00269	1
ANO4	CTNNA3	0.0027	1
22q-Amp	Amp_8q24.21	0.0027	1
DSG3	MYO16	0.00271	1
DSG3	SELP	0.00271	1
Del_11q23.3	Del_16q23.1	0.00271	1
EPHA4	USH2A	0.00272	1
EZH2	PTPN11	0.00272	1
KRT73	OXA1L	0.00272	1
KCND2	PTPN22	0.00275	1
NRAS	Amp_6p24.3	0.00275	1
EPHA4	TP53	0.00278	1
KEL	SLC9A11	0.00279	1
Del_2q37.3	Del_10q26.3	0.0028	1
NAP1L2	PARM1	0.00282	1
KCND2	MPP7	0.00285	1
COL3A1	OR6C74	0.00286	1
USP17L2	XIRP2	0.00286	1
11q-Del	Del_8p23.3	0.00286	1
Del_1p22.1	Del_5q12.1	0.00286	1
Del_4p16.3	Del_5q12.1	0.00286	1
CTNNA3	DCLK3	0.00287	1
CTNNA3	FGFR2	0.00287	1
CTNNA3	NBPF1	0.00287	1
CTNNA3	POTEG	0.00287	1
DSG3	FRMPD4	0.00287	1
MYO3B	TP53	0.00287	1
MYO3B	USP17L2	0.00287	1
MYO16	USH2A	0.00288	1
Del_10q21.1	Del_15q21.1	0.00288	1
10q-Del	Del_3q13.31	0.00289	1
10q-Del	Del_19p13.3	0.00289	1
11q-Del	Del_19p13.3	0.0029	1
CAMTA1	DSG3	0.00291	1
DSG3	NAP1L2	0.00291	1
11p-Del	Del_14q23.3	0.00293	1
14q-Del	Del_16q23.1	0.00293	1
C7orf58	FGFR2	0.00295	1
C7orf58	NBPF1	0.00295	1
EPHA7	KEL	0.00295	1
14q-Del	18p-Del	0.00295	1
18p-Del	Del_5q12.1	0.00295	1
Del_1p22.1	Del_16q24.3	0.00295	1
APCS	NF1	0.00296	1
Amp_6p24.3	Del_11q23.3	0.00296	1
Del_12q23.3	Del_16q24.3	0.00296	1
6p-Del	Del_9p21.3	0.00297	1
CDC42BPA	USP9X	0.00303	1
NF1	RPTN	0.00303	1
RIPK4	USP9X	0.00303	1
Del_14q23.3	Del_16q23.1	0.00303	1
COL3A1	KCND2	0.00306	1
EPHA7	RELN	0.00306	1
MLL	RELN	0.00307	1
ACSBG1	PTPN22	0.00308	1
Del_5q12.1	Del_6q26	0.00308	1
9q-Del	Del_16q12.1	0.00309	1
11q-Del	Del_10q26.3	0.0031	1
CPA3	RELN	0.00312	1
Amp_8q24.21	Del_9p23	0.00313	1
ATP5F1	NF1	0.00314	1
BRAF	10q-Del	0.00315	1
RQCD1	1q-Amp	0.00315	1
Del_10p15.3	Del_19p13.3	0.00316	1
ANO4	C10orf54	0.00317	1
ANO4	S100A8	0.00317	1
Amp_1q21.3	Amp_8q24.21	0.00317	1
Del_1p36.31	Del_12q23.3	0.00319	1
Del_10q23.31	Del_16q12.1	0.00321	1
Amp_7p22.1	Del_9p23	0.00322	1
EPHA7	NAP1L2	0.00323	1
MSTN	XIRP2	0.00323	1
PTEN	10p-Del	0.00323	1
SLC27A5	XIRP2	0.00323	1
XIRP2	ZNF780B	0.00323	1
EPHA4	KRTAP5-10	0.00325	1
CNTN5	THSD7B	0.00326	1
DCLK3	OXA1L	0.00326	1
DCLK3	S100A8	0.00326	1
MLL	OR6C74	0.00326	1
OXA1L	Del_2q37.3	0.00326	1
GML	Amp_20q13.33	0.00327	1
CAMTA1	PDGFRA	0.00328	1
EPHA7	MAN1A1	0.00328	1
Del_1p36.31	Del_10q26.3	0.00329	1
EPHA6	SYK	0.00331	1
TRERF1	USH2A	0.00331	1
Del_1p36.31	Del_15q13.3	0.00331	1
LGR6	RPTN	0.00335	1
14q-Del	Del_8p23.3	0.00336	1
NF1	THSD7B	0.00337	1
16q-Del	Del_10p15.3	0.00337	1
CYP3A4	OR4S2	0.00338	1
LGR6	USP9X	0.00338	1
NF1	USP17L2	0.0034	1
Amp_6p24.3	Amp_7p22.1	0.00341	1
CDC42BPA	MYO3B	0.00342	1
EZH2	FRMPD4	0.00342	1
8q-Amp	11q-Del	0.00342	1
10q-Del	Del_8p23.3	0.00344	1
MPP7	PDGFRA	0.00345	1
BTK	HSD11B1	0.00346	1
CPA3	EPHA7	0.00346	1
CYP3A4	EPHA7	0.00346	1
ALPK2	APC	0.00347	1
8p-Amp	Amp_20q13.33	0.00347	1
KEL	STK19	0.00348	1
OXA1L	SYK	0.00349	1
Amp_6p24.3	Amp_15q26.2	0.00349	1
Amp_13q31.3	Amp_20q13.33	0.00349	1
APC	PARM1	0.00352	1
EPHA6	FGFR2	0.00352	1
PARM1	PDGFRA	0.00352	1
COL3A1	GLI1	0.00354	1
Amp_8q24.21	Del_10q26.3	0.00354	1
GUCY2F	THSD7B	0.00357	1
17p-Del	Del_5q31.3	0.00357	1
FLT1	ZNF780B	0.00358	1
KEL	MSTN	0.00358	1
KEL	SLC27A5	0.00358	1
MPP7	NF1	0.00358	1
GLI1	XIRP2	0.00359	1
Del_9p23	Del_16q24.3	0.00359	1
EPHA7	KCND2	0.00363	1
FGFR2	NF1	0.00363	1
KCND2	SLC38A4	0.00363	1
NF1	POTEG	0.00363	1
Del_2q37.3	Del_15q21.1	0.00363	1
8q-Amp	Del_10p15.3	0.00364	1
ARID2	RELN	0.00366	1
DSG3	GML	0.00367	1
ACSBG1	DCLK3	0.00369	1
ACSBG1	FGFR2	0.00369	1
Amp_7q34	Del_14q23.3	0.00371	1
C7orf58	SELP	0.00372	1
17p-Del	6q-Del	0.00372	1
Amp_7p22.1	Del_6q26	0.00374	1
Del_10q21.1	Del_11q23.3	0.00374	1
6q-Del	Del_5q12.1	0.00375	1
CAMTA1	CPA3	0.00379	1
CYP3A4	NAP1L2	0.00379	1
C7orf58	TP63	0.0038	1
6p-Del	Del_16q24.3	0.0038	1
RELN	THSD7B	0.00381	1
Del_15q21.1	Del_16q23.1	0.00381	1
ANO4	BTK	0.00386	1
7p-Amp	10p-Del	0.00387	1
CDK4	TP53	0.00388	1
Del_14q23.3	Del_15q13.3	0.00392	1
Del_15q13.3	Del_16q12.1	0.00392	1
6p-Del	Del_1p22.1	0.00394	1
Amp_11q13.3	Del_1p22.1	0.00394	1
CTNNA3	DSG3	0.00396	1
CTNNA3	TP53	0.00396	1
Amp_13q31.3	Amp_15q26.2	0.00396	1
CCNA1	RQCD1	0.00398	1
CDC42BPA	RQCD1	0.00398	1
EZH2	RQCD1	0.00398	1
RIPK4	RQCD1	0.00398	1
6p-Del	Del_19p13.3	0.00399	1
GLI1	SLC9A11	0.004	1
SLC38A4	TP63	0.00403	1
Amp_8q24.21	Amp_22q13.2	0.00403	1
DCLK3	RELN	0.00404	1
FGFR2	RELN	0.00404	1
10q-Del	Del_1p36.31	0.00404	1
10q-Del	Del_4q34.3	0.00404	1
Del_3q13.31	Del_10q21.1	0.00404	1
Del_10q21.1	Del_19p13.3	0.00404	1
ANO4	POTEG	0.00405	1
ARID2	SLC27A5	0.00407	1
C7orf58	ZNF780B	0.00407	1
CTNNA3	OR4S2	0.00407	1
22q-Amp	Amp_7q34	0.00407	1
KCND2	THSD7B	0.00412	1
APC	TP53	0.00413	1
DSG3	PDGFRA	0.00413	1
PTPN22	TP53	0.00413	1
Amp_12q14.1	Del_15q21.1	0.00414	1
NAP1L2	NBPF1	0.00417	1
Amp_1q44	Amp_17q25.3	0.00418	1
FLT1	FRMPD4	0.00421	1
FLT1	MYO3B	0.00421	1
Del_1p22.1	Del_11q23.3	0.00423	1
KEL	PARM1	0.00424	1
NUP214	USH2A	0.00424	1
ANO4	GUCY2F	0.00426	1
20q-Amp	Amp_6p24.3	0.00426	1
10p-Del	Del_4q34.3	0.00426	1
APC	EPHA7	0.00428	1
FRMPD4	S100A8	0.00431	1
MYO16	TPTE	0.00431	1
MYO3B	OXA1L	0.00431	1
SELP	TPTE	0.00431	1
7p-Amp	Amp_20q13.33	0.00432	1
FGFR2	PARM1	0.00434	1
PARM1	POTEG	0.00434	1
EPHA7	SLC9A11	0.00441	1
Amp_17q25.3	Del_2q37.3	0.00452	1
Amp_8q24.21	Del_15q21.1	0.00454	1
MAN1A1	NUP214	0.00456	1
Amp_5p15.33	Amp_22q13.2	0.00456	1
14q-Del	Del_5q31.3	0.00458	1
CPA3	SLC9A11	0.00462	1
Amp_1q44	Amp_8q24.21	0.00462	1
Del_6q26	Del_16q12.1	0.00468	1
C15orf23	KRT73	0.00471	1
CPA3	PTPN22	0.00471	1
LGR6	PDGFRA	0.00471	1
OXA1L	TP63	0.00471	1
PDGFRA	RAC1	0.00471	1
6p-Amp	Del_8p23.3	0.00475	1
EPHA4	SELP	0.00477	1
EPHA4	SLC38A4	0.00477	1
MAP2K1	MYO16	0.00481	1
CDC42BPA	RELN	0.00482	1
KRT73	RELN	0.00482	1
ALPK2	NBPF1	0.00483	1
Del_15q13.3	Del_16p13.3	0.00485	1
CTNNA3	PTPN11	0.00491	1
EPHA4	RELN	0.00493	1
Del_11q23.3	Del_16q12.1	0.00493	1
ALPK2	C15orf23	0.00494	1
ALPK2	PARM1	0.00494	1
7p-Amp	Del_10q23.31	0.00494	1
ATP5F1	CYP3A4	0.00495	1
MLL	RPTN	0.005	1
20p-Amp	Amp_1q44	0.00501	1
ARID2	PARM1	0.00502	1
NF1	RELN	0.00502	1
8q-Amp	Del_8p23.3	0.00502	1
1q-Amp	22q-Amp	0.00503	1
9p-Del	Del_4q34.3	0.00504	1
APCS	THSD7B	0.00512	1
18p-Del	Del_6q21	0.00512	1
EPHA6	MPP7	0.00514	1
ACSBG1	MYO3B	0.00516	1
APCS	MYO3B	0.00516	1
FAM58A	KRAS	0.00517	1
10p-Del	Amp_8q24.21	0.00517	1
Amp_7q34	Del_9p21.3	0.00518	1
C7orf58	MYO3B	0.00519	1
CDKN2A	FLT1	0.00519	1
RPTN	USP9X	0.00522	1
C7orf58	TPTE	0.00523	1
COL3A1	FRMPD4	0.00526	1
COL3A1	MYO3B	0.00526	1
CAMTA1	MAN1A1	0.00527	1
CAMTA1	NUP214	0.00527	1
NAP1L2	ZFX	0.00527	1
8p-Amp	10p-Del	0.00529	1
14q-Del	Del_19p13.3	0.00533	1
APC	DCLK3	0.00534	1
APC	NBPF1	0.00534	1
FGFR2	TRERF1	0.00534	1
20p-Amp	8p-Amp	0.00534	1
6q-Del	Del_1p22.1	0.00535	1
Del_5p15.31	Del_9p21.3	0.00537	1
1q-Amp	Del_11q23.3	0.00538	1
Del_10p15.3	Del_16q23.1	0.00538	1
C10orf54	MAN1A1	0.0054	1
7p-Amp	10q-Del	0.00542	1
DMC1	THSD7B	0.00543	1
GLI1	MPP7	0.00543	1
ACSBG1	HRAS	0.00544	1
Amp_1q44	Amp_20q13.33	0.00548	1
DCLK3	NGF	0.00549	1
DCLK3	OR6C74	0.00549	1
FGFR2	USH2A	0.00549	1
CDC42BPA	MSTN	0.00555	1
KIT	MSTN	0.00555	1
KRT73	MSTN	0.00555	1
Amp_1q21.3	Del_11q23.3	0.00555	1
BRAF	Del_10q21.1	0.00558	1
EPHA7	FGFR2	0.00559	1
MYO16	NBPF1	0.00559	1
NBPF1	SELP	0.00559	1
8p-Amp	Amp_1q21.3	0.00559	1
9q-Del	Del_5p15.31	0.00559	1
CNTN5	PTPN22	0.00566	1
CNTN5	OR4S2	0.00567	1
C15orf23	TP53	0.0057	1
COL3A1	GUCY2F	0.0057	1
DCLK3	DSG3	0.00572	1
NBPF1	TP53	0.00572	1
ALPK2	CCNA1	0.00573	1
PDGFRA	RPTN	0.00574	1
CDC42BPA	LGR6	0.00575	1
PDGFRA	TP63	0.00575	1
PTPN22	TP63	0.00575	1
CPA3	DCLK3	0.00579	1
CPA3	POTEG	0.00579	1
CYP3A4	FGFR2	0.00579	1
CYP3A4	PARM1	0.00579	1
DDX3X	20p-Amp	0.00579	1
FGFR2	RAC1	0.00579	1
16q-Del	Del_1p22.1	0.00582	1
16q-Del	Del_4p16.3	0.00582	1
MPP7	Del_12q23.3	0.00583	1
Del_1p22.1	Del_12q23.3	0.00583	1
EPHA7	MYO16	0.00587	1
EPHA7	SLC38A4	0.00587	1
KRT73	TPTE	0.00587	1
RIPK4	TPTE	0.00587	1
EPHA4	EPHA6	0.00588	1
EPHA4	XIRP2	0.0059	1
KEL	NAP1L2	0.0059	1
KYNU	NUP214	0.0059	1
Amp_4q12	Amp_15q26.2	0.0059	1
C15orf23	NF1	0.00591	1
GUCY2F	NF1	0.00591	1
CYP3A4	FLT1	0.00593	1
17p-Del	Del_11q23.3	0.00593	1
TP63	Del_11q23.3	0.00594	1
8q-Amp	Del_11q23.3	0.00594	1
16q-Del	Del_15q21.1	0.00595	1
5q-Del	Del_Xp21.1	0.00596	1
9p-Del	Del_4p16.3	0.006	1
COL3A1	MSTN	0.00602	1
COL3A1	SLC27A5	0.00602	1
Del_10p15.3	Del_15q21.1	0.00603	1
CTNNA3	SYK	0.00604	1
9q-Del	Del_16p13.3	0.00609	1
8q-Amp	9p-Del	0.00617	1
EPHA4	PTPN22	0.00619	1
EPHA6	OXA1L	0.00619	1
9q-Del	Del_4p16.3	0.00619	1
10q-Del	Del_5q12.1	0.00625	1
CDC42BPA	SLC38A4	0.00626	1
EPHA7	GLI1	0.00626	1
EPHA7	KIT	0.00626	1
EPHA7	KRT73	0.00626	1
EPHA7	RIPK4	0.00626	1
GLI1	SELP	0.00626	1
KIT	MYO16	0.00626	1
Del_9p23	Del_13q34	0.00627	1
CNTN5	KEL	0.00628	1
C10orf54	MPP7	0.0063	1
COL3A1	PDGFRA	0.00631	1
COL3A1	PTPN22	0.00631	1
8p-Amp	11q-Del	0.00631	1
11q-Del	Del_5p15.31	0.00631	1
Amp_7p22.1	Del_10q23.31	0.00631	1
APC	MAN1A1	0.00633	1
MAN1A1	PDGFRA	0.00633	1
MAN1A1	TRERF1	0.00633	1
NUP214	PTPN22	0.00633	1
NUP214	TRERF1	0.00633	1
EPHA4	TPTE	0.00638	1
Amp_8q24.21	Del_15q13.3	0.00638	1
FLT1	TP53	0.0064	1
FRMPD4	GUCY2F	0.0064	1
FRMPD4	PARM1	0.0064	1
MSTN	NAP1L2	0.0064	1
Del_4q34.3	Del_14q23.3	0.0064	1
CDC42BPA	TP53	0.00641	1
DSG3	RIPK4	0.00641	1
EPHA7	USP17L2	0.00642	1
MPP7	THSD7B	0.00644	1
17p-Del	Del_10q21.1	0.00644	1
13q-Amp	1q-Amp	0.00645	1
CAMTA1	USP17L2	0.00647	1
BTK	TPTE	0.00649	1
MYO3B	NAP1L2	0.0065	1
ANO4	SELP	0.00651	1
1q-Amp	Amp_7p22.1	0.00651	1
10p-Del	Amp_1q44	0.00651	1
8q-Amp	Del_15q13.3	0.00653	1
CYP3A4	THSD7B	0.00654	1
CAMTA1	EPHA6	0.00655	1
ARID2	COL3A1	0.00657	1
C7orf58	COL3A1	0.00657	1
11q-Del	14q-Del	0.00657	1
11q-Del	Del_5q12.1	0.00657	1
SLC9A11	SYK	0.00658	1
C15orf23	XIRP2	0.0066	1
EPHA4	SLC9A11	0.0066	1
GUCY2F	XIRP2	0.0066	1
ANO4	FAM58A	0.00661	1
11p-Del	Del_16q24.3	0.00662	1
CNTN5	TP63	0.00668	1
DCLK3	POTEG	0.00674	1
FGFR2	NBPF1	0.00674	1
NRAS	Del_5p15.31	0.00677	1
Amp_8q24.21	Del_11q23.3	0.00679	1
10p-Del	Amp_7p22.1	0.00683	1
10p-Del	Del_19p13.3	0.00687	1
EPHA6	FRMPD4	0.00688	1
ALPK2	RQCD1	0.00694	1
CDC42BPA	EPHA4	0.00694	1
Del_5q12.1	Del_10q23.31	0.00694	1
9p-Del	Del_13q34	0.007	1
CTNNA3	USH2A	0.00701	1
KCND2	KEL	0.00702	1
APCS	KCND2	0.00703	1
NF1	NUP214	0.00705	1
Amp_12q15	Del_15q21.1	0.00705	1
ACSBG1	KRTAP5-10	0.00708	1
ACSBG1	ZNF780B	0.00708	1
EPHA7	PTPN11	0.00708	1
EPHA7	S100A8	0.00708	1
IGF1R	KRTAP5-10	0.00708	1
MSTN	SYK	0.00708	1
11p-Del	Del_4p16.3	0.00713	1
BRAF	Del_10q26.3	0.00718	1
CAMTA1	KYNU	0.00722	1
CDKN2A	TP53	0.00722	1
Del_4p16.3	Del_9p23	0.00724	1
6q-Del	Del_16q12.1	0.00725	1
EPHA4	PARM1	0.00728	1
HRAS	ZFX	0.00729	1
RPTN	ZNF780B	0.00733	1
MYO16	TTN	0.00734	1
Amp_7p22.1	Del_10p15.3	0.00734	1
BTK	TTN	0.00736	1
Amp_7q34	Del_8p23.3	0.00736	1
CYP3A4	LGR6	0.00737	1
MSTN	TRERF1	0.00743	1
TRERF1	ZNF780B	0.00743	1
FRMPD4	STK19	0.00747	1
HSD11B1	MYO3B	0.00747	1
GUCY2F	TP63	0.00749	1
DCLK3	ZFX	0.00753	1
NAP1L2	THSD7B	0.00758	1
DCLK3	EPHA4	0.00759	1
EPHA4	POTEG	0.00759	1
SLC38A4	XIRP2	0.0076	1
7p-Amp	Del_10q26.3	0.00761	1
16q-Del	Del_9p23	0.00763	1
CNTN5	CTNNA3	0.00765	1
CTNNA3	PARM1	0.00767	1
FGFR2	RPTN	0.00767	1
NBPF1	RPTN	0.00767	1
9p-Del	Amp_7p22.1	0.00772	1
7q-Amp	18p-Del	0.00773	1
APC	KEL	0.00775	1
FLT1	PDGFRA	0.00775	1
CNTN5	KRT73	0.00777	1
ATP5F1	TP53	0.00778	1
DSG3	KYNU	0.00779	1
DSG3	THSD7B	0.00779	1
ALPK2	SLC38A4	0.00782	1
MSTN	RELN	0.00786	1
NUP214	XIRP2	0.0079	1
20p-Amp	8q-Amp	0.00792	1
ACSBG1	CPA3	0.00794	1
7p-Amp	Del_9p23	0.00794	1
CTNNA3	THSD7B	0.00795	1
Del_4q34.3	Del_9p23	0.00795	1
CCNA1	TP63	0.00797	1
EZH2	TP63	0.00797	1
KRT73	TP63	0.00797	1
CTNNA3	NAP1L2	0.00798	1
RPTN	STK19	0.008	1
MLL	PARM1	0.00805	1
Amp_1p12	Amp_4q12	0.00808	1
Amp_12q15	Del_15q13.3	0.00808	1
Del_9p21.3	Del_16q12.1	0.00808	1
EPHA4	KEL	0.00809	1
NGF	XIRP2	0.00809	1
Del_1p22.1	Del_16q12.1	0.00809	1
APCS	MPP7	0.00812	1
MPP7	SYK	0.00812	1
C7orf58	RPTN	0.00813	1
Del_8p23.3	Del_10q26.3	0.00814	1
Del_5q31.3	Del_16q23.1	0.00817	1
11p-Del	Del_3q13.31	0.00821	1
10p-Del	5q-Del	0.00824	1
ANO4	NAP1L2	0.00826	1
APC	MYO3B	0.00827	1
C7orf58	TP53	0.00827	1
FRMPD4	PDGFRA	0.00827	1
MYO3B	PTPN22	0.00827	1
MYO3B	TRERF1	0.00827	1
Amp_7p22.1	Del_11q23.3	0.00828	1
CNTN5	FGFR2	0.00829	1
CPA3	DSG3	0.00829	1
DDX3X	TP53	0.00829	1
DSG3	LGR6	0.00829	1
MYO3B	RELN	0.00829	1
20p-Amp	10p-Del	0.00831	1
18p-Del	5q-Del	0.00831	1
ACSBG1	ANO4	0.00833	1
ANO4	SYK	0.00833	1
SYK	XIRP2	0.00836	1
MLL	TP63	0.0084	1
20q-Amp	8q-Amp	0.0084	1
Del_2q37.3	Del_13q34	0.00841	1
7q-Amp	Del_9p23	0.00842	1
17p-Del	Del_9p23	0.00842	1
17p-Del	Amp_1p12	0.00843	1
20p-Amp	Amp_1q21.3	0.00846	1
CAMTA1	NF1	0.00847	1
DDX3X	MYO3B	0.0085	1
FRMPD4	LGR6	0.0085	1
MYO3B	RAC1	0.0085	1
SLC38A4	USH2A	0.00856	1
MSTN	NBPF1	0.00857	1
MSTN	POTEG	0.00857	1
ARID2	KCND2	0.00858	1
NBPF1	TTN	0.00863	1
POTEG	TTN	0.00863	1
GML	Amp_1q21.3	0.0087	1
C15orf23	STK19	0.00874	1
GUCY2F	STK19	0.00874	1
16q-Del	Del_13q34	0.00877	1
20q-Amp	Amp_8q24.21	0.0088	1
9p-Del	Del_16p13.3	0.00881	1
CNTN5	NUP214	0.00883	1
7p-Amp	Del_10p15.3	0.00883	1
HSD11B1	ZNF780B	0.00885	1
FLT1	MPP7	0.00888	1
Del_1p22.1	Del_4q34.3	0.00888	1
9q-Del	Del_4q34.3	0.0089	1
Amp_1q21.3	Del_6q21	0.0089	1
ANO4	TPTE	0.00892	1
11q-Del	18p-Del	0.00893	1
C15orf23	USP17L2	0.00902	1
10p-Del	Del_15q21.1	0.00903	1
8q-Amp	Del_10q26.3	0.0091	1
Del_10p15.3	Del_16q24.3	0.0091	1
MYO16	MYO3B	0.00911	1
MYO3B	SLC38A4	0.00911	1
11q-Del	Del_14q23.3	0.00911	1
C15orf23	KCND2	0.00912	1
EPHA6	TRERF1	0.00912	1
KCND2	PARM1	0.00912	1
BTK	EPHA6	0.00913	1
EPHA4	TTN	0.00914	1
RPTN	TP53	0.00914	1
7p-Amp	Amp_1q44	0.00916	1
14q-Del	Amp_8q24.21	0.00917	1
6p-Del	Del_12q23.3	0.0092	1
Amp_11q13.3	Del_13q34	0.0092	1
FRMPD4	MLL	0.00921	1
BTK	MLL	0.00923	1
MLL	ZFX	0.00923	1
CYP3A4	EPHA4	0.00924	1
ARID2	PTPN22	0.00929	1
FLT1	GLI1	0.0093	1
FLT1	RIPK4	0.0093	1
GLI1	KEL	0.0093	1
KEL	KIT	0.0093	1
CTNNA3	EPHA6	0.00931	1
Amp_1q44	Del_6q21	0.00933	1
ACSBG1	SELP	0.00934	1
APCS	SELP	0.00934	1
CYP3A5	MYO16	0.00934	1
SELP	SYK	0.00934	1
FLT1	NF1	0.00943	1
Del_1p36.31	Del_15q21.1	0.00943	1
DMC1	22q-Amp	0.00946	1
APCS	GML	0.00948	1
ATP5F1	S100A8	0.00948	1
ACSBG1	EPHA4	0.00955	1
ATP5F1	CAMTA1	0.00958	1
RELN	TRERF1	0.00961	1
NAP1L2	OR4S2	0.00962	1
CCNA1	GLI1	0.0097	1
CCNA1	RIPK4	0.0097	1
CDC42BPA	RIPK4	0.0097	1
EZH2	RIPK4	0.0097	1
RELN	SLC9A11	0.00972	1
Del_1p22.1	Del_16q23.1	0.00973	1
Del_6q21	Del_19p13.3	0.00975	1
FGFR2	USP17L2	0.00976	1
POTEG	USP17L2	0.00976	1
C7orf58	TTN	0.00978	1
NRAS	1q-Amp	0.00992	1
8q-Amp	Amp_15q26.2	0.00992	1
Amp_15q26.2	Del_16q24.3	0.00992	1
DCLK3	KEL	0.01	1
KEL	NBPF1	0.01	1
Del_1p36.31	Del_10q21.1	0.0101	1
BRAF	Amp_7p22.1	0.0102	1
FGFR2	KYNU	0.0102	1
16q-Del	Del_11q23.3	0.0102	1
Del_8p23.3	Del_14q23.3	0.0102	1
Del_15q21.1	Del_16q12.1	0.0102	1
HSD11B1	TTN	0.0103	1
RELN	TP53	0.0103	1
STK19	TTN	0.0103	1
TP63	Del_16q24.3	0.0103	1
1q-Amp	20p-Amp	0.0103	1
Del_5q12.1	Del_6q21	0.0103	1
ACSBG1	DSG3	0.0104	1
APCS	DSG3	0.0104	1
FRMPD4	Del_2q37.3	0.0104	1
MYO3B	POTEG	0.0104	1
20q-Amp	Amp_5p15.33	0.0104	1
Del_16p13.3	Del_19p13.3	0.0104	1
ACSBG1	TPTE	0.0105	1
ARID2	CCNA1	0.0105	1
STK19	THSD7B	0.0105	1
Amp_1p12	Del_11q23.3	0.0105	1
HSD11B1	PPP6C	0.0106	1
11p-Del	Del_8p23.3	0.0106	1
Del_8p23.3	Del_10q23.31	0.0106	1
APC	ATP5F1	0.0107	1
C15orf23	RPTN	0.0107	1
CNTN5	KCND2	0.0107	1
C7orf58	MPP7	0.0108	1
EPHA6	GLI1	0.0108	1
KEL	USP9X	0.0108	1
MPP7	PARM1	0.0108	1
PDGFRA	USH2A	0.0108	1
8p-Amp	Del_10q21.1	0.0108	1
17p-Del	9p-Del	0.0108	1
Del_3q13.31	Del_10p15.3	0.0108	1
ARID2	S100A8	0.0109	1
BTK	ZNF780B	0.0109	1
C10orf54	C15orf23	0.0109	1
C7orf58	RELN	0.0109	1
GUCY2F	S100A8	0.0109	1
MAN1A1	MSTN	0.0109	1
MAN1A1	ZNF780B	0.0109	1
GML	TRERF1	0.011	1
MYO3B	TPTE	0.011	1
NRAS	Amp_13q31.3	0.011	1
ANO4	APC	0.0111	1
ANO4	KRTAP5-10	0.0111	1
ANO4	MSTN	0.0111	1
ANO4	PDGFRA	0.0111	1
ANO4	SLC27A5	0.0111	1
ANO4	TRERF1	0.0111	1
ANO4	ZNF780B	0.0111	1
APC	NF1	0.0111	1
COL3A1	GML	0.0111	1
EPHA4	FRMPD4	0.0111	1
EPHA4	MYO3B	0.0111	1
FLT1	SELP	0.0111	1
KRT73	USH2A	0.0111	1
10p-Del	Del_16q24.3	0.0111	1
18p-Del	Del_11q23.3	0.0111	1
Del_5q12.1	Del_10p15.3	0.0111	1
MSTN	MYO3B	0.0112	1
MYO3B	ZNF780B	0.0112	1
7p-Amp	Amp_6p24.3	0.0112	1
Amp_1q21.3	Amp_13q31.3	0.0112	1
Del_2q37.3	Del_10q23.31	0.0112	1
EPHA6	FAM58A	0.0113	1
11q-Del	9q-Del	0.0113	1
APC	TTN	0.0114	1
CPA3	USP17L2	0.0114	1
CYP3A4	USP17L2	0.0114	1
DDX3X	Amp_13q31.3	0.0114	1
LGR6	USP17L2	0.0114	1
OR4S2	OR6C74	0.0114	1
PDGFRA	TTN	0.0114	1
RQCD1	USP9X	0.0114	1
ALPK2	CTNNA3	0.0115	1
RB1	Amp_1q21.3	0.0115	1
DSG3	USP9X	0.0116	1
Del_4p16.3	Del_10q26.3	0.0116	1
Del_10q21.1	Del_15q13.3	0.0116	1
EPHA7	OR6C74	0.0117	1
MYO16	OR6C74	0.0117	1
11q-Del	Del_16q23.1	0.0117	1
Del_9p23	Del_16p13.3	0.0117	1
CYP3A4	XIRP2	0.0118	1
NF1	RIPK4	0.0118	1
10p-Del	Del_1p36.31	0.0118	1
6p-Del	Del_10q26.3	0.0118	1
CNTN5	MSTN	0.0119	1
NUP214	RPTN	0.0119	1
14q-Del	Del_16q24.3	0.0119	1
Del_13q34	Del_16q23.1	0.0119	1
APC	THSD7B	0.012	1
ATP5F1	DCLK3	0.012	1
ATP5F1	POTEG	0.012	1
CCNA1	THSD7B	0.012	1
GLI1	THSD7B	0.012	1
GML	RPTN	0.012	1
NF1	S100A8	0.012	1
6p-Amp	Del_16q12.1	0.012	1
Amp_7q34	Del_6q21	0.012	1
CBL	FAM58A	0.0121	1
FAM58A	RB1	0.0121	1
KRAS	RB1	0.0121	1
Amp_17q25.3	Del_11q23.3	0.0121	1
ACSBG1	GLI1	0.0123	1
ACSBG1	RIPK4	0.0123	1
CDC42BPA	SYK	0.0123	1
CYP3A4	TTN	0.0123	1
GLI1	IGF1R	0.0123	1
GUCY2F	USH2A	0.0123	1
KCND2	TRERF1	0.0123	1
LGR6	TTN	0.0123	1
RAC1	TTN	0.0123	1
10q-Del	Amp_7p22.1	0.0123	1
11q-Del	Del_12q23.3	0.0123	1
11q-Del	Del_13q34	0.0123	1
Del_4p16.3	Del_10p15.3	0.0123	1
Del_16q12.1	Del_19p13.3	0.0123	1
RAC1	RELN	0.0124	1
FLT1	TTN	0.0125	1
PDGFRA	TPTE	0.0125	1
POTEG	9p-Del	0.0125	1
TPTE	TRERF1	0.0125	1
Del_5q12.1	Del_11q23.3	0.0125	1
C15orf23	EPHA7	0.0126	1
CPA3	S100A8	0.0126	1
GUCY2F	SLC38A4	0.0126	1
LGR6	OXA1L	0.0126	1
MYO16	PARM1	0.0126	1
RAC1	S100A8	0.0126	1
Amp_1p12	Amp_7p22.1	0.0126	1
Amp_7p22.1	Del_15q13.3	0.0126	1
ANO4	KCND2	0.0127	1
COL3A1	EPHA4	0.0127	1
PTPN11	RELN	0.0127	1
11q-Del	6p-Del	0.0127	1
Del_9p21.3	Del_15q21.1	0.0127	1
MYO16	TP63	0.0131	1
16q-Del	Del_14q23.3	0.0131	1
16q-Del	Del_19p13.3	0.0131	1
CDK4	Amp_1p12	0.0132	1
S100A8	USH2A	0.0132	1
22q-Amp	7q-Amp	0.0132	1
FRMPD4	USH2A	0.0133	1
HSD11B1	SELP	0.0133	1
MYO16	STK19	0.0133	1
THSD7B	ZNF780B	0.0133	1
Del_6q26	Del_8p23.3	0.0133	1
EPHA6	RELN	0.0134	1
KIT	NAP1L2	0.0134	1
NRAS	Amp_1q21.3	0.0134	1
TP53	ZNF780B	0.0134	1
9p-Del	Del_1p36.31	0.0134	1
Del_14q23.3	Del_16q24.3	0.0134	1
ARID2	MYO16	0.0135	1
C15orf23	THSD7B	0.0135	1
C7orf58	EPHA7	0.0135	1
ACSBG1	FLT1	0.0137	1
CNTN5	SYK	0.0137	1
SLC9A11	TPTE	0.0137	1
16q-Del	Del_1p36.31	0.0137	1
20p-Amp	10q-Del	0.0138	1
10q-Del	Del_2q37.3	0.0138	1
Amp_5p15.33	Amp_20q13.33	0.0139	1
BTK	KCND2	0.014	1
GUCY2F	SLC9A11	0.014	1
KCND2	MAN1A1	0.014	1
KCND2	NUP214	0.014	1
NRAS	PPP6C	0.014	1
OXA1L	THSD7B	0.014	1
Del_1p36.31	Del_6q26	0.014	1
BRAF	Del_10q23.31	0.0141	1
CPA3	MPP7	0.0141	1
FRMPD4	USP17L2	0.0141	1
MYO3B	TP63	0.0141	1
5q-Del	Del_10p15.3	0.0141	1
NF1	OR4S2	0.0142	1
14q-Del	Amp_7q34	0.0142	1
14q-Del	Del_15q13.3	0.0142	1
ALPK2	STK19	0.0143	1
ANO4	CDKN2A	0.0143	1
C15orf23	CNTN5	0.0143	1
Del_8p23.3	Del_15q21.1	0.0143	1
HSD11B1	RELN	0.0144	1
ANO4	NBPF1	0.0146	1
TP63	USP9X	0.0146	1
8q-Amp	Amp_20q13.33	0.0146	1
8q-Amp	Amp_22q13.2	0.0146	1
DSG3	7p-Amp	0.0147	1
FRMPD4	GNAQ	0.0147	1
MPP7	PTPN22	0.0147	1
MYO16	SLC9A11	0.0147	1
S100A8	TPTE	0.0147	1
Del_4q34.3	Del_16p13.3	0.0147	1
COL3A1	MLL	0.0148	1
KRT73	MLL	0.0148	1
11q-Del	17p-Del	0.0148	1
ATP5F1	MSTN	0.0149	1
ATP5F1	ZNF780B	0.0149	1
COL3A1	TP53	0.0149	1
DSG3	PTPN22	0.0149	1
DSG3	TRERF1	0.0149	1
EPHA4	MLL	0.0149	1
FAM58A	MSTN	0.0149	1
KCND2	MLL	0.0149	1
PDGFRA	TP53	0.0149	1
11p-Del	Del_5p15.31	0.0149	1
11q-Del	Amp_12q14.1	0.0149	1
Amp_12q14.1	Del_5p15.31	0.0149	1
MAN1A1	SLC9A11	0.015	1
SLC9A11	ZFX	0.015	1
20q-Amp	Del_11q23.3	0.015	1
5q-Del	6q-Del	0.015	1
EPHA4	TP63	0.0151	1
STK19	USP17L2	0.0151	1
8q-Amp	Amp_11q13.3	0.0151	1
NRAS	Del_9p23	0.0152	1
1q-Amp	10p-Del	0.0152	1
MLL	PDGFRA	0.0153	1
MLL	TTN	0.0153	1
TP53	5q-Del	0.0153	1
6p-Amp	Amp_1q21.3	0.0153	1
Amp_5p15.33	Del_5p15.31	0.0153	1
Amp_8q24.21	Del_6q26	0.0153	1
Del_4p16.3	Del_9p21.3	0.0153	1
APC	KRT73	0.0154	1
CDC42BPA	PDGFRA	0.0154	1
CDC42BPA	PTPN22	0.0154	1
CYP3A4	TPTE	0.0154	1
EPHA6	FLT1	0.0154	1
GLI1	PTPN22	0.0154	1
KRT73	TRERF1	0.0154	1
PPP6C	TPTE	0.0154	1
RIPK4	TRERF1	0.0154	1
18p-Del	Amp_1q44	0.0154	1
APCS	ARID2	0.0155	1
C7orf58	SYK	0.0155	1
KCND2	RELN	0.0155	1
6p-Del	9p-Del	0.0155	1
ACSBG1	IGF1R	0.0156	1
KRTAP5-10	OR4S2	0.0156	1
KRTAP5-10	USP9X	0.0156	1
18p-Del	Amp_7p22.1	0.0156	1
APC	CAMTA1	0.0157	1
APC	NAP1L2	0.0157	1
C15orf23	CBL	0.0157	1
CBL	GUCY2F	0.0157	1
CPA3	EPHA6	0.0157	1
GUCY2F	NGF	0.0157	1
NAP1L2	TRERF1	0.0157	1
Del_1p22.1	Del_15q13.3	0.0157	1
Amp_8q24.21	Del_14q23.3	0.0158	1
C10orf28	TP53	0.0159	1
CTNNA3	TTN	0.0159	1
Amp_6p24.3	Amp_20q13.33	0.0159	1
FRMPD4	KEL	0.016	1
GUCY2F	NAP1L2	0.016	1
TP53	USP17L2	0.016	1
Amp_1q44	Del_10p15.3	0.016	1
MAN1A1	MPP7	0.0161	1
MPP7	MSTN	0.0161	1
MPP7	ZNF780B	0.0161	1
RB1	Amp_1q44	0.0161	1
RQCD1	Amp_1q44	0.0161	1
Del_5q31.3	Del_16q24.3	0.0161	1
ANO4	MPP7	0.0162	1
MYO16	NF1	0.0162	1
7q-Amp	Del_10q23.31	0.0162	1
Amp_3p13	Amp_15q26.2	0.0163	1
C7orf58	THSD7B	0.0165	1
CCNA1	CDKN2A	0.0165	1
CPA3	SELP	0.0165	1
CYP3A4	SLC38A4	0.0165	1
EPHA4	NUP214	0.0165	1
EPHA7	RAC1	0.0165	1
GUCY2F	TTN	0.0165	1
LGR6	SLC38A4	0.0165	1
6p-Amp	Del_3q13.31	0.0165	1
10p-Del	Del_5q12.1	0.0165	1
Del_2q37.3	Del_10q21.1	0.0165	1
CTNNA3	RPTN	0.0166	1
NRAS	11q-Del	0.0166	1
OR4S2	TPTE	0.0166	1
PTEN	Del_10p15.3	0.0166	1
14q-Del	16q-Del	0.0166	1
TP63	Del_16q23.1	0.0167	1
20p-Amp	Amp_1p12	0.0167	1
CTNNA3	USP17L2	0.0168	1
STK19	XIRP2	0.0168	1
TPTE	9q-Del	0.0168	1
7p-Amp	Amp_1q21.3	0.0168	1
ALPK2	POTEG	0.0169	1
ATP5F1	COL3A1	0.0169	1
GML	TPTE	0.0169	1
20p-Amp	Amp_22q13.2	0.0169	1
BTK	COL3A1	0.017	1
Del_4q34.3	Del_6q21	0.017	1
ALPK2	CDKN2A	0.0172	1
OXA1L	PTPN11	0.0172	1
APCS	EPHA6	0.0173	1
BRAF	PTEN	0.0173	1
MPP7	SLC38A4	0.0173	1
NBPF1	TPTE	0.0173	1
PTPN11	RPTN	0.0173	1
STK19	TPTE	0.0173	1
20p-Amp	7p-Amp	0.0173	1
16q-Del	Del_5q31.3	0.0173	1
NF1	SYK	0.0174	1
20q-Amp	10p-Del	0.0174	1
10p-Del	17p-Del	0.0174	1
11q-Del	Amp_8q24.21	0.0174	1
Del_3q13.31	Del_6q26	0.0174	1
NRAS	TTN	0.0175	1
9q-Del	Del_1p22.1	0.0175	1
CPA3	KYNU	0.0176	1
DDX3X	Amp_15q26.2	0.0176	1
EPHA7	PTPN22	0.0176	1
PDGFRA	SELP	0.0176	1
PTPN22	SELP	0.0176	1
Del_2q37.3	Del_16p13.3	0.0176	1
CDC42BPA	DCLK3	0.0177	1
CDC42BPA	FGFR2	0.0177	1
CDKN2A	KCND2	0.0177	1
EMG1	PDGFRA	0.0177	1
COL3A1	SELP	0.0178	1
CDKN2A	PDGFRA	0.0179	1
EPHA7	MSTN	0.0179	1
MYO3B	SLC9A11	0.0179	1
SELP	SLC27A5	0.0179	1
7q-Amp	Del_10p15.3	0.0179	1
APC	CNTN5	0.018	1
BTK	USH2A	0.018	1
CBL	Amp_6q12	0.0181	1
CPA3	OR6C74	0.0181	1
OR6C74	PPP6C	0.0181	1
APCS	NAP1L2	0.0182	1
10p-Del	Del_16q23.1	0.0182	1
Amp_7p22.1	Amp_20q13.33	0.0182	1
CCNA1	RPTN	0.0183	1
CDC42BPA	RPTN	0.0183	1
DCLK3	MPP7	0.0183	1
FGFR2	THSD7B	0.0183	1
KRT73	XIRP2	0.0183	1
MPP7	NBPF1	0.0183	1
RIPK4	RPTN	0.0183	1
RIPK4	XIRP2	0.0183	1
18p-Del	Del_1p22.1	0.0183	1
EPHA7	NUP214	0.0184	1
NUP214	SLC38A4	0.0184	1
C10orf28	TP63	0.0185	1
FRMPD4	USP9X	0.0185	1
Amp_7p22.1	Del_10q26.3	0.0185	1
17p-Del	Del_4p16.3	0.0186	1
CCNA1	COL3A1	0.0187	1
CDC42BPA	NUP214	0.0187	1
GLI1	MAN1A1	0.0187	1
KRT73	MAN1A1	0.0187	1
KRT73	NUP214	0.0187	1
NUP214	RIPK4	0.0187	1
CTNNB1	KCND2	0.0188	1
Del_9p21.3	Del_16q24.3	0.0188	1
CAMTA1	FGFR2	0.0189	1
CAMTA1	NBPF1	0.0189	1
CAMTA1	POTEG	0.0189	1
8q-Amp	Amp_1p12	0.0189	1
Amp_1q44	Amp_13q31.3	0.0189	1
ARID2	FRMPD4	0.019	1
PARM1	TRERF1	0.019	1
Amp_20q13.33	Del_1p22.1	0.019	1
APC	PDGFRA	0.0191	1
CTNNA3	MYO3B	0.0191	1
CYP3A4	SLC9A11	0.0191	1
PDGFRA	PTPN22	0.0191	1
6p-Amp	Amp_6q12	0.0191	1
ALPK2	CNTN5	0.0192	1
CYP3A4	16q-Del	0.0192	1
TP53	XIRP2	0.0193	1
7p-Amp	Del_8p23.3	0.0193	1
FLT1	STK19	0.0194	1
THSD7B	ZFX	0.0194	1
20q-Amp	10q-Del	0.0194	1
10q-Del	17p-Del	0.0194	1
6q-Del	Del_15q13.3	0.0194	1
FAM58A	Amp_17q25.3	0.0195	1
FLT1	PARM1	0.0195	1
HSD11B1	TP63	0.0195	1
20q-Amp	18p-Del	0.0195	1
Amp_8q24.21	Amp_11q13.3	0.0195	1
EPHA4	RPTN	0.0196	1
NUP214	USP17L2	0.0196	1
S100A8	XIRP2	0.0196	1
20q-Amp	Amp_13q31.3	0.0196	1
7q-Amp	10p-Del	0.0196	1
6p-Del	Del_16q12.1	0.0196	1
EMG1	POTEG	0.0197	1
20p-Amp	Amp_8q24.21	0.0197	1
Amp_7q34	Amp_8q24.21	0.0198	1
6p-Amp	Amp_7p22.1	0.02	1
10p-Del	Del_4p16.3	0.02	1
Amp_6p24.3	Del_10p15.3	0.02	1
CPA3	NAP1L2	0.0201	1
Del_1p36.31	Del_14q23.3	0.0201	1
Del_1p36.31	Del_16q12.1	0.0201	1
Del_4q34.3	Del_16q12.1	0.0201	1
CCNA1	TTN	0.0202	1
DDX3X	USH2A	0.0202	1
EZH2	TTN	0.0202	1
RIPK4	TTN	0.0202	1
7q-Amp	10q-Del	0.0202	1
Amp_8q24.21	Del_6q21	0.0202	1
Del_9p23	Del_15q21.1	0.0202	1
13q-Amp	Amp_20q13.33	0.0203	1
8p-Amp	Del_11q23.3	0.0203	1
Del_5p15.31	Del_11q23.3	0.0203	1
Amp_17q25.3	Del_6q21	0.0204	1
C10orf54	SLC9A11	0.0205	1
NUDT11	SLC9A11	0.0205	1
OXA1L	SLC9A11	0.0205	1
S100A8	SLC9A11	0.0205	1
EPHA6	KRTAP5-10	0.0206	1
TP63	USP17L2	0.0206	1
APC	RPTN	0.0207	1
RB1	1q-Amp	0.0207	1
22q-Amp	Amp_1q44	0.0207	1
Amp_11q13.3	Del_19p13.3	0.0208	1
ACSBG1	PDGFRA	0.0209	1
ALPK2	BTK	0.0209	1
CYP3A5	PDGFRA	0.0209	1
IDH1	16q-Del	0.0209	1
IGF1R	PTPN22	0.0209	1
MYO16	SLC38A4	0.0209	1
PDGFRA	SYK	0.0209	1
TPTE	Del_16q12.1	0.0209	1
13q-Amp	Del_11q23.3	0.0209	1
EPHA4	KYNU	0.021	1
Amp_5p15.33	Del_15q21.1	0.021	1
ANO4	DSG3	0.0212	1
ATP5F1	EPHA7	0.0212	1
EPHA4	EPHA7	0.0212	1
KYNU	SLC9A11	0.0213	1
18p-Del	Del_5q31.3	0.0213	1
C15orf23	ZNF780B	0.0214	1
7q-Amp	Amp_1q44	0.0214	1
10q-Del	6p-Del	0.0214	1
ACSBG1	USH2A	0.0215	1
APCS	USH2A	0.0215	1
CDC42BPA	FAM58A	0.0215	1
CDC42BPA	GNAQ	0.0215	1
CTNNB1	MPP7	0.0215	1
EZH2	GNAQ	0.0215	1
GNAQ	RIPK4	0.0215	1
Del_4q34.3	Del_11q23.3	0.0215	1
COL3A1	PARM1	0.0216	1
NAP1L2	RELN	0.0216	1
IGF1R	MLL	0.0217	1
MLL	SYK	0.0217	1
MYO16	POTEG	0.0217	1
NGF	S100A8	0.0218	1
OR6C74	OXA1L	0.0218	1
Amp_20q13.33	Del_13q34	0.0219	1
CPA3	THSD7B	0.022	1
DDX3X	USP9X	0.022	1
LGR6	THSD7B	0.022	1
DSG3	MPP7	0.0221	1
18p-Del	6q-Del	0.0221	1
Amp_1q44	Del_13q34	0.0221	1
FLT1	RELN	0.0222	1
KEL	RELN	0.0222	1
RELN	Del_4q34.3	0.0222	1
C15orf23	DCLK3	0.0223	1
DCLK3	PARM1	0.0223	1
NBPF1	PARM1	0.0223	1
RIPK4	SLC9A11	0.0224	1
6p-Del	Del_16q23.1	0.0224	1
MAN1A1	RELN	0.0225	1
MLL	SLC9A11	0.0225	1
10p-Del	Del_8p23.3	0.0225	1
17p-Del	Del_10q23.31	0.0226	1
PARM1	XIRP2	0.0227	1
CDC42BPA	FRMPD4	0.0228	1
GLI1	MYO3B	0.0228	1
1q-Amp	Del_6q21	0.0228	1
ATP5F1	TPTE	0.0229	1
FRMPD4	KCND2	0.0229	1
MLL	MYO16	0.0229	1
MLL	SLC38A4	0.0229	1
APC	FGFR2	0.023	1
FGFR2	PDGFRA	0.023	1
FGFR2	PTPN22	0.023	1
NBPF1	PDGFRA	0.023	1
NBPF1	TRERF1	0.023	1
NRAS	Del_11q23.3	0.023	1
POTEG	TRERF1	0.023	1
1q-Amp	8p-Amp	0.023	1
11q-Del	16q-Del	0.023	1
MPP7	USP17L2	0.0231	1
DSG3	MAN1A1	0.0232	1
DSG3	NUP214	0.0232	1
DSG3	ZFX	0.0232	1
MAN1A1	TP53	0.0232	1
Del_10p15.3	Del_16q12.1	0.0232	1
OR4S2	RPTN	0.0233	1
11p-Del	Del_10q26.3	0.0233	1
C7orf58	CTNNA3	0.0234	1
ACSBG1	NUP214	0.0235	1
IGF1R	NUP214	0.0235	1
MAN1A1	SYK	0.0235	1
NGF	17p-Del	0.0235	1
11q-Del	Del_15q21.1	0.0235	1
APC	CYP3A4	0.0237	1
APC	RAC1	0.0237	1
CYP3A4	TRERF1	0.0237	1
DDX3X	PDGFRA	0.0237	1
LGR6	TRERF1	0.0237	1
PPP6C	TRERF1	0.0237	1
NAP1L2	S100A8	0.0238	1
SELP	9q-Del	0.0238	1
10p-Del	Del_2q37.3	0.0238	1
Amp_7p22.1	Del_8p23.3	0.0238	1
Del_1p36.31	Del_16q23.1	0.0238	1
ACSBG1	POTEG	0.0239	1
ALPK2	MYO16	0.0239	1
APCS	DCLK3	0.0239	1
APCS	POTEG	0.0239	1
ARID2	DSG3	0.0239	1
CAMTA1	HSD11B1	0.0239	1
DCLK3	SYK	0.0239	1
FGFR2	SYK	0.0239	1
NBPF1	SYK	0.0239	1
POTEG	SYK	0.0239	1
Del_5p15.31	Del_16q23.1	0.0239	1
Del_9p21.3	Del_13q34	0.0239	1
C10orf28	MYO3B	0.024	1
RELN	RIPK4	0.024	1
ANO4	OXA1L	0.0241	1
ANO4	PTPN11	0.0241	1
6p-Amp	Del_11q23.3	0.0241	1
SLC9A11	USH2A	0.0242	1
9p-Del	Amp_1q44	0.0242	1
APC	5q-Del	0.0243	1
FLT1	KCND2	0.0243	1
Del_3q13.31	Del_8p23.3	0.0243	1
ANO4	RAC1	0.0244	1
C7orf58	FLT1	0.0245	1
C7orf58	KEL	0.0245	1
CTNNB1	EPHA7	0.0245	1
FLT1	KRTAP5-10	0.0245	1
FLT1	MSTN	0.0245	1
KEL	KRTAP5-10	0.0245	1
KYNU	MYO16	0.0245	1
KYNU	SELP	0.0245	1
NF1	STK19	0.0245	1
20q-Amp	Del_13q34	0.0245	1
14q-Del	Del_1p36.31	0.0245	1
14q-Del	Del_4q34.3	0.0245	1
16q-Del	6p-Del	0.0245	1
Amp_5p15.33	Del_13q34	0.0245	1
KCND2	OR4S2	0.0246	1
7q-Amp	Amp_20q13.33	0.0246	1
7q-Amp	Del_10q26.3	0.0246	1
8p-Amp	10q-Del	0.0246	1
18p-Del	Amp_1q21.3	0.0246	1
CYP3A5	Del_5q31.3	0.0247	1
RELN	TPTE	0.0247	1
8p-Amp	Del_10p15.3	0.0247	1
11q-Del	Amp_1q21.3	0.0247	1
Amp_5p15.33	Amp_12q14.1	0.0247	1
CAMTA1	EPHA4	0.0248	1
CNTN5	POTEG	0.0248	1
CPA3	ZNF780B	0.0248	1
EPHA4	NAP1L2	0.0248	1
MSTN	Amp_6q12	0.0248	1
5q-Del	Del_4p16.3	0.0248	1
Amp_8q24.21	Del_10p15.3	0.0249	1
Del_5q31.3	Del_Xp21.1	0.025	1
CCK	5q-Del	0.0251	1
Del_4q34.3	Del_10q21.1	0.0251	1
Del_11q23.3	Del_15q13.3	0.0251	1
6p-Amp	Del_6q26	0.0252	1
CPA3	FLT1	0.0253	1
CYP3A4	KEL	0.0253	1
FLT1	RAC1	0.0253	1
20q-Amp	Amp_1p12	0.0253	1
7q-Amp	Amp_6p24.3	0.0253	1
Amp_5p15.33	Del_15q13.3	0.0253	1
FRMPD4	Del_11q23.3	0.0254	1
TP53	Del_5q31.3	0.0255	1
7q-Amp	Del_6q21	0.0255	1
18p-Del	Del_16q24.3	0.0256	1
CDKN2A	RQCD1	0.0257	1
Del_4p16.3	Del_14q23.3	0.0257	1
GML	SLC38A4	0.0259	1
ALPK2	C10orf54	0.026	1
ALPK2	PTPN11	0.026	1
ALPK2	S100A8	0.026	1
EPHA4	OR4S2	0.0261	1
EPHA4	USP9X	0.0261	1
6p-Amp	Del_6q21	0.0261	1
OR4S2	XIRP2	0.0262	1
POTEG	RPTN	0.0262	1
Amp_7q34	Del_4q34.3	0.0262	1
Del_2q37.3	Del_16q12.1	0.0262	1
7p-Amp	9p-Del	0.0263	1
6p-Del	Del_10p15.3	0.0263	1
BTK	FLT1	0.0265	1
BTK	KEL	0.0265	1
FLT1	MAN1A1	0.0265	1
KEL	MAN1A1	0.0265	1
KEL	ZFX	0.0265	1
7p-Amp	Del_10q21.1	0.0265	1
Amp_12q15	Del_1p36.31	0.0265	1
APC	C10orf54	0.0266	1
APCS	RPTN	0.0266	1
CDC42BPA	OR4S2	0.0266	1
EZH2	USP9X	0.0266	1
MPP7	TPTE	0.0266	1
OR4S2	RIPK4	0.0266	1
OXA1L	PDGFRA	0.0266	1
MYO16	RELN	0.0267	1
Del_5q31.3	Del_19p13.3	0.0267	1
MAN1A1	TPTE	0.0268	1
ARID2	ZNF780B	0.0269	1
C7orf58	MSTN	0.0269	1
CAMTA1	MYO3B	0.0269	1
MSTN	OXA1L	0.0269	1
ANO4	CCNA1	0.027	1
ANO4	CDC42BPA	0.027	1
ANO4	KRT73	0.027	1
ANO4	RIPK4	0.027	1
CDKN2A	EPHA7	0.027	1
GML	THSD7B	0.027	1
Amp_6q12	Amp_12q14.1	0.027	1
ATP5F1	CNTN5	0.0271	1
CCK	FLT1	0.0271	1
GNAQ	KEL	0.0271	1
22q-Amp	7p-Amp	0.0271	1
11q-Del	Amp_1q44	0.0271	1
COL3A1	FGFR2	0.0272	1
EMG1	NRAS	0.0272	1
NGF	TPTE	0.0274	1
5q-Del	Del_6q21	0.0274	1
APC	STK19	0.0275	1
HSD11B1	PDGFRA	0.0275	1
HSD11B1	PTPN22	0.0275	1
HSD11B1	TRERF1	0.0275	1
CTNNA3	KCND2	0.0276	1
ALPK2	FRMPD4	0.0277	1
DSG3	SLC38A4	0.0277	1
SLC38A4	TP53	0.0277	1
DCLK3	RAC1	0.0278	1
DDX3X	NBPF1	0.0278	1
FGFR2	LGR6	0.0278	1
LGR6	NBPF1	0.0278	1
1q-Amp	Amp_15q26.2	0.0278	1
16q-Del	Amp_15q26.2	0.0278	1
Del_5q31.3	Del_13q34	0.0279	1
C10orf54	DSG3	0.028	1
CCNA1	TPTE	0.028	1
CDC42BPA	TPTE	0.028	1
DSG3	S100A8	0.028	1
EZH2	TPTE	0.028	1
FRMPD4	XIRP2	0.028	1
NRAS	13q-Amp	0.028	1
OXA1L	TP53	0.028	1
PTEN	Amp_8q24.21	0.028	1
6p-Amp	Del_4q34.3	0.028	1
GML	TTN	0.0281	1
Del_4q34.3	Del_5q31.3	0.0281	1
IDH1	Del_16q24.3	0.0282	1
EPHA4	SLC27A5	0.0283	1
EPHA4	ZNF780B	0.0283	1
FLT1	PTPN22	0.0283	1
Amp_8q24.21	Amp_13q31.3	0.0283	1
Amp_13q31.3	Del_11q23.3	0.0283	1
Del_1p22.1	Del_5q31.3	0.0283	1
Del_4p16.3	Del_5q31.3	0.0283	1
9p-Del	Del_8p23.3	0.0284	1
C15orf23	TP63	0.0285	1
Amp_1p12	Del_10q26.3	0.0285	1
CDKN2A	TP63	0.0286	1
13q-Amp	Del_15q13.3	0.0287	1
Del_11q23.3	Del_14q23.3	0.0287	1
CCNA1	KCND2	0.0288	1
CDC42BPA	KCND2	0.0288	1
KCND2	RIPK4	0.0288	1
Del_2q37.3	Del_9p23	0.0288	1
APC	EPHA6	0.0289	1
ARID2	LGR6	0.0289	1
20q-Amp	Del_6q26	0.0289	1
11q-Del	Amp_20q13.33	0.0289	1
BTK	STK19	0.029	1
17p-Del	9q-Del	0.029	1
Del_5q12.1	Del_16q23.1	0.029	1
NRAS	20p-Amp	0.0292	1
OR4S2	SLC9A11	0.0292	1
TPTE	Del_4q34.3	0.0292	1
7p-Amp	Del_4q34.3	0.0292	1
ACSBG1	COL3A1	0.0293	1
NF1	TP53	0.0294	1
TTN	USP9X	0.0294	1
ALPK2	GLI1	0.0295	1
ALPK2	KRT73	0.0295	1
DCLK3	PTPN11	0.0295	1
FGFR2	OXA1L	0.0295	1
FGFR2	S100A8	0.0295	1
GLI1	Amp_20q13.33	0.0295	1
NBPF1	OXA1L	0.0295	1
NBPF1	PTPN11	0.0295	1
NGF	USH2A	0.0295	1
RQCD1	Del_10q21.1	0.0295	1
1q-Amp	Del_10p15.3	0.0295	1
NRAS	THSD7B	0.0296	1
ARID2	MAN1A1	0.0297	1
ARID2	NUP214	0.0297	1
BTK	C7orf58	0.0297	1
Amp_7p22.1	Amp_8q24.21	0.0298	1
PTPN22	USH2A	0.03	1
Del_5p15.31	Del_10q21.1	0.03	1
MAN1A1	XIRP2	0.0301	1
Del_2q37.3	Del_11q23.3	0.0301	1
COL3A1	CYP3A4	0.0302	1
SYK	Amp_7q34	0.0302	1
7q-Amp	Del_6q26	0.0302	1
10p-Del	Del_15q13.3	0.0302	1
10q-Del	Amp_1q44	0.0302	1
18p-Del	Del_16q23.1	0.0302	1
HSD11B1	17p-Del	0.0303	1
KYNU	USH2A	0.0303	1
MLL	MYO3B	0.0303	1
MLL	STK19	0.0303	1
6p-Amp	Del_10q26.3	0.0303	1
Amp_13q31.3	Del_6q21	0.0304	1
CAMTA1	Del_8p23.3	0.0305	1
GML	Amp_7p22.1	0.0305	1
Del_4p16.3	Del_11q23.3	0.0305	1
DDX3X	DSG3	0.0306	1
EPHA6	TP53	0.0306	1
LGR6	TP53	0.0306	1
Amp_1p12	Amp_20q13.33	0.0306	1
DSG3	TP53	0.0307	1
NAP1L2	NUP214	0.0307	1
USP17L2	USP9X	0.0307	1
16q-Del	Amp_13q31.3	0.0309	1
6p-Del	Del_10q21.1	0.0312	1
Del_14q23.3	Del_16p13.3	0.0312	1
DCLK3	HSD11B1	0.0313	1
FGFR2	HSD11B1	0.0313	1
FGFR2	STK19	0.0313	1
KYNU	5q-Del	0.0313	1
NBPF1	STK19	0.0313	1
20q-Amp	7p-Amp	0.0313	1
8p-Amp	Amp_7p22.1	0.0314	1
Amp_1q21.3	Amp_15q26.2	0.0315	1
FRMPD4	TP53	0.0317	1
22q-Amp	Amp_20q13.33	0.0318	1
MYO16	USP9X	0.0319	1
SELP	USP9X	0.0319	1
Amp_1q44	Del_8p23.3	0.0319	1
IDH1	Amp_6p24.3	0.032	1
ZFX	Amp_6p24.3	0.032	1
Amp_1q44	Del_9p23	0.0321	1
BRAF	TTN	0.0322	1
CCNA1	MPP7	0.0322	1
CCNA1	TP53	0.0322	1
CDC42BPA	DSG3	0.0322	1
CDC42BPA	MPP7	0.0322	1
DSG3	KRT73	0.0322	1
FRMPD4	SLC38A4	0.0322	1
KRT73	MPP7	0.0322	1
KRT73	TP53	0.0322	1
MSTN	USP17L2	0.0322	1
ACSBG1	SLC9A11	0.0323	1
PTPN11	TP63	0.0323	1
ALPK2	NRAS	0.0324	1
C15orf23	MLL	0.0324	1
C15orf23	17p-Del	0.0324	1
KYNU	TP53	0.0324	1
MLL	13q-Amp	0.0324	1
COL3A1	ZNF780B	0.0325	1
CYP3A4	DMC1	0.0325	1
FRMPD4	PTPN22	0.0325	1
FRMPD4	TRERF1	0.0325	1
FRMPD4	8p-Amp	0.0325	1
Amp_6q12	Del_6q21	0.0325	1
Del_5q12.1	Del_16q24.3	0.0325	1
CYP3A4	GUCY2F	0.0326	1
DDX3X	13q-Amp	0.0326	1
EPHA6	GML	0.0326	1
GUCY2F	LGR6	0.0326	1
LGR6	PARM1	0.0326	1
MAP2K1	THSD7B	0.0326	1
PARM1	PPP6C	0.0326	1
CYP3A4	NF1	0.0327	1
LGR6	NF1	0.0327	1
NF1	RAC1	0.0327	1
Del_13q34	Del_16q12.1	0.0327	1
APC	C7orf58	0.0328	1
C7orf58	PDGFRA	0.0328	1
C7orf58	PTPN22	0.0328	1
NGF	SLC9A11	0.0328	1
OR6C74	SLC9A11	0.0328	1
TTN	USP17L2	0.0329	1
Amp_1q21.3	Amp_22q13.2	0.0329	1
Del_2q37.3	Del_12q23.3	0.0329	1
Del_4q34.3	Del_6q26	0.0329	1
PDGFRA	THSD7B	0.033	1
C10orf28	USH2A	0.0332	1
10p-Del	Amp_6p24.3	0.0332	1
9p-Del	Del_2q37.3	0.0332	1
Amp_4q12	Del_15q21.1	0.0332	1
ACSBG1	USP9X	0.0333	1
CNTN5	NGF	0.0333	1
GNAQ	MAN1A1	0.0333	1
GNAQ	NUP214	0.0333	1
IGF1R	OR4S2	0.0333	1
RAC1	1q-Amp	0.0333	1
CPA3	Del_11q23.3	0.0334	1
13q-Amp	Amp_1q21.3	0.0334	1
10p-Del	Del_13q34	0.0336	1
CAMTA1	OR6C74	0.0337	1
PTEN	RQCD1	0.0337	1
17p-Del	5q-Del	0.0337	1
KRAS	Del_15q13.3	0.0338	1
CBL	ZNF780B	0.0339	1
KRTAP5-10	OR6C74	0.0339	1
APCS	XIRP2	0.0342	1
IGF1R	XIRP2	0.0342	1
22q-Amp	Amp_1q21.3	0.0342	1
C10orf28	EPHA7	0.0343	1
CNTN5	IDH1	0.0343	1
ACSBG1	C10orf28	0.0344	1
CYP3A5	EMG1	0.0344	1
Del_4q34.3	Del_15q13.3	0.0344	1
MYO16	NRAS	0.0345	1
6p-Amp	Del_2q37.3	0.0345	1
14q-Del	Del_4p16.3	0.0345	1
C15orf23	CTNNA3	0.0346	1
CTNNA3	GUCY2F	0.0346	1
HSD11B1	MAP2K1	0.0346	1
FLT1	POTEG	0.0347	1
TP63	Del_16q12.1	0.0347	1
18p-Del	Del_1p36.31	0.0347	1
Amp_3p13	Amp_20q13.33	0.0347	1
Amp_3p13	Amp_22q13.2	0.0347	1
CNTN5	EZH2	0.0349	1
7q-Amp	6q-Del	0.0349	1
CAMTA1	Amp_1p12	0.035	1
CDKN2A	MYO3B	0.035	1
GML	KEL	0.035	1
FLT1	KYNU	0.0351	1
HRAS	SELP	0.0351	1
NUP214	ZFX	0.0351	1
Amp_4q12	Amp_12q15	0.0351	1
BTK	PDGFRA	0.0352	1
KEL	MYO16	0.0352	1
MAN1A1	PTPN22	0.0352	1
KRTAP5-10	MLL	0.0353	1
MLL	MSTN	0.0353	1
MLL	ZNF780B	0.0353	1
10p-Del	Amp_1q21.3	0.0353	1
APC	USP17L2	0.0354	1
PTPN22	USP17L2	0.0354	1
TRERF1	USP17L2	0.0354	1
Del_6q21	Del_8p23.3	0.0354	1
7p-Amp	Del_6q21	0.0355	1
ANO4	PTPN22	0.0356	1
Del_3q13.31	Del_Xp21.1	0.0356	1
CPA3	10p-Del	0.0358	1
GLI1	SLC38A4	0.0358	1
KRT73	SELP	0.0358	1
Del_4p16.3	Del_16p13.3	0.0358	1
ANO4	OR4S2	0.0359	1
Amp_6p24.3	Del_8p23.3	0.0359	1
C15orf23	GLI1	0.0361	1
CCNA1	PARM1	0.0361	1
CDC42BPA	PARM1	0.0361	1
CPA3	XIRP2	0.0361	1
EZH2	GUCY2F	0.0361	1
GLI1	PARM1	0.0361	1
GUCY2F	RIPK4	0.0361	1
KIT	PARM1	0.0361	1
KRT73	PARM1	0.0361	1
RAC1	XIRP2	0.0361	1
FRMPD4	Del_6q21	0.0362	1
COL3A1	OR4S2	0.0363	1
COL3A1	USP9X	0.0363	1
GNAQ	Amp_5p15.33	0.0363	1
5q-Del	Amp_22q13.2	0.0363	1
5q-Del	Del_12q23.3	0.0364	1
ALPK2	17p-Del	0.0369	1
HSD11B1	RPTN	0.0369	1
STK19	Del_16q12.1	0.0369	1
11q-Del	Del_1p36.31	0.0369	1
11q-Del	Del_4q34.3	0.0369	1
NRAS	Del_9p21.3	0.037	1
CTNNA3	MLL	0.0371	1
Amp_3p13	Amp_5p15.33	0.0371	1
CNTN5	NAP1L2	0.0372	1
EPHA6	NUP214	0.0372	1
Del_1p22.1	Del_6q26	0.0372	1
Del_4p16.3	Del_6q26	0.0372	1
CPA3	MYO3B	0.0373	1
CYP3A4	MYO3B	0.0373	1
FRMPD4	PPP6C	0.0373	1
FRMPD4	RAC1	0.0373	1
LGR6	MYO3B	0.0373	1
NGF	PDGFRA	0.0375	1
RELN	TP63	0.0375	1
7q-Amp	9p-Del	0.0376	1
CCK	KYNU	0.0377	1
CCK	MAP2K1	0.0377	1
Amp_7q34	Amp_22q13.2	0.0377	1
LGR6	TP63	0.038	1
PPP6C	TP63	0.038	1
RAC1	TP63	0.038	1
GLI1	TP63	0.0381	1
CNTN5	Amp_17q25.3	0.0382	1
POTEG	RELN	0.0382	1
C10orf54	CDC42BPA	0.0383	1
CDC42BPA	OXA1L	0.0383	1
KRT73	PTPN11	0.0383	1
CDKN2A	ZNF780B	0.0384	1
CTNNA3	EPHA7	0.0385	1
22q-Amp	Amp_15q26.2	0.0386	1
C15orf23	EPHA6	0.0387	1
FGFR2	FRMPD4	0.0388	1
FRMPD4	POTEG	0.0388	1
6p-Amp	Del_16q23.1	0.0388	1
CPA3	DDX3X	0.0389	1
MPP7	6q-Del	0.039	1
6q-Del	Del_4p16.3	0.039	1
KYNU	TTN	0.0391	1
C7orf58	KYNU	0.0392	1
CTNNB1	TPTE	0.0392	1
KRTAP5-10	TTN	0.0392	1
KYNU	Del_5q12.1	0.0392	1
MSTN	TTN	0.0392	1
SLC27A5	TTN	0.0392	1
GUCY2F	KCND2	0.0395	1
TP63	Del_9p21.3	0.0395	1
8q-Amp	Del_9p21.3	0.0395	1
6p-Del	Del_13q34	0.0395	1
C10orf28	HSD11B1	0.0396	1
HSD11B1	THSD7B	0.0396	1
Amp_1p12	Amp_8q24.21	0.0396	1
Del_2q37.3	Del_6q21	0.0396	1
Del_15q21.1	Del_16q24.3	0.0396	1
ALPK2	OR4S2	0.0397	1
CAMTA1	MLL	0.0399	1
20q-Amp	22q-Amp	0.0399	1
BTK	FGFR2	0.04	1
DCLK3	MAN1A1	0.04	1
FGFR2	MAN1A1	0.04	1
MAN1A1	NBPF1	0.04	1
MYO3B	STK19	0.04	1
Amp_4q12	Del_2q37.3	0.04	1
ARID2	POTEG	0.0401	1
C7orf58	DCLK3	0.0401	1
DSG3	EPHA4	0.0401	1
11p-Del	6p-Del	0.0401	1
MYO3B	Del_16q12.1	0.0402	1
Del_1p22.1	Del_15q21.1	0.0402	1
KEL	MLL	0.0403	1
Amp_7p22.1	Amp_22q13.2	0.0404	1
NF1	Del_11q23.3	0.0407	1
CBL	GML	0.0408	1
NRAS	Del_12q23.3	0.0408	1
6p-Amp	Del_15q21.1	0.0408	1
Amp_5p15.33	Amp_12q15	0.0408	1
11q-Del	Amp_11q13.3	0.0409	1
FRMPD4	8q-Amp	0.041	1
20p-Amp	Amp_13q31.3	0.0413	1
11p-Del	Amp_1q21.3	0.0413	1
ANO4	USP17L2	0.0414	1
ATP5F1	RPTN	0.0414	1
CCK	RPTN	0.0414	1
CNTN5	USP17L2	0.0414	1
EPHA4	NF1	0.0414	1
GNAQ	RPTN	0.0414	1
MLL	THSD7B	0.0414	1
APC	Del_Xp21.1	0.0415	1
CCNA1	PPP6C	0.0415	1
CDC42BPA	CYP3A4	0.0415	1
CPA3	GLI1	0.0415	1
CPA3	KRT73	0.0415	1
CPA3	RIPK4	0.0415	1
CYP3A4	KRT73	0.0415	1
DDX3X	GLI1	0.0415	1
GLI1	RAC1	0.0415	1
LGR6	RIPK4	0.0415	1
NGF	Del_2q37.3	0.0415	1
NRAS	11p-Del	0.0415	1
PPP6C	RIPK4	0.0415	1
KRTAP5-10	MSTN	0.0416	1
KRTAP5-10	ZNF780B	0.0416	1
SLC27A5	ZNF780B	0.0416	1
BTK	CTNNB1	0.0418	1
IDH1	MAP2K1	0.0418	1
KYNU	MAN1A1	0.0418	1
KYNU	Amp_4q12	0.0418	1
CNTN5	RELN	0.0419	1
ACSBG1	ALPK2	0.0421	1
ALPK2	SYK	0.0421	1
GML	NF1	0.0421	1
RPTN	17p-Del	0.0422	1
TRERF1	TTN	0.0422	1
20p-Amp	Amp_7p22.1	0.0422	1
Amp_5p15.33	Del_14q23.3	0.0422	1
Amp_7p22.1	Del_2q37.3	0.0422	1
ATP5F1	OR4S2	0.0423	1
GNAQ	OR4S2	0.0423	1
CAMTA1	MPP7	0.0427	1
CDKN2A	CTNNA3	0.0427	1
CPA3	CTNNA3	0.0427	1
MPP7	NAP1L2	0.0427	1
C10orf54	KCND2	0.0429	1
KCND2	OXA1L	0.0429	1
KCND2	S100A8	0.0429	1
SYK	Del_4p16.3	0.0429	1
SYK	TPTE	0.043	1
SYK	7p-Amp	0.043	1
8q-Amp	11p-Del	0.043	1
COL3A1	STK19	0.0431	1
8p-Amp	Del_15q13.3	0.0431	1
Amp_7p22.1	Del_10q21.1	0.0431	1
Del_5p15.31	Del_15q13.3	0.0431	1
Amp_15q26.2	Del_15q21.1	0.0436	1
Amp_20q13.33	Del_4q34.3	0.0439	1
APC	KYNU	0.044	1
KYNU	PTPN22	0.044	1
Amp_1q44	Del_10q21.1	0.0442	1
NRAS	SLC27A5	0.0444	1
7p-Amp	Del_6q26	0.0448	1
PARM1	SYK	0.045	1
RQCD1	10q-Del	0.045	1
GUCY2F	USP17L2	0.0451	1
PARM1	USP17L2	0.0451	1
FLT1	USP9X	0.0452	1
CCNA1	USH2A	0.0453	1
GLI1	USH2A	0.0453	1
NBPF1	Amp_3p13	0.0453	1
PDGFRA	11p-Del	0.0453	1
RIPK4	USH2A	0.0453	1
22q-Amp	8q-Amp	0.0453	1
CAMTA1	KRTAP5-10	0.0454	1
CAMTA1	MSTN	0.0454	1
CAMTA1	SLC27A5	0.0454	1
CAMTA1	ZNF780B	0.0454	1
KRTAP5-10	NAP1L2	0.0454	1
IDH1	NRAS	0.0455	1
KRTAP5-10	TPTE	0.0455	1
TPTE	ZNF780B	0.0455	1
Amp_17q25.3	Del_9p23	0.0455	1
Del_8p23.3	Del_10q21.1	0.0455	1
KCND2	SELP	0.0456	1
CNTN5	GUCY2F	0.0457	1
CNTN5	PARM1	0.0457	1
CNTN5	13q-Amp	0.0457	1
ACSBG1	TP53	0.0458	1
ANO4	C7orf58	0.0458	1
CYP3A5	TP53	0.0458	1
DSG3	IGF1R	0.0458	1
DSG3	SYK	0.0458	1
MPP7	Amp_17q25.3	0.0458	1
SYK	11p-Del	0.0458	1
Amp_1q44	Amp_15q26.2	0.0458	1
EPHA4	LGR6	0.0459	1
Del_5q31.3	Del_11q23.3	0.0459	1
HRAS	NF1	0.0461	1
ALPK2	USP17L2	0.0462	1
COL3A1	7q-Amp	0.0464	1
Amp_1p12	Amp_11q13.3	0.0466	1
Amp_1p12	Del_1p22.1	0.0466	1
Amp_1p12	Del_4p16.3	0.0466	1
Amp_1q21.3	Del_5p15.31	0.0466	1
Del_4p16.3	Del_15q13.3	0.0466	1
C10orf28	C7orf58	0.0467	1
C10orf54	Amp_17q25.3	0.0467	1
MPP7	OXA1L	0.0467	1
MPP7	S100A8	0.0467	1
NUDT11	Del_1p22.1	0.0467	1
RELN	USP9X	0.0469	1
Amp_6p24.3	Amp_7q34	0.0469	1
ATP5F1	SLC9A11	0.047	1
KRAS	6p-Amp	0.047	1
TPTE	10q-Del	0.047	1
CCNA1	EPHA4	0.0472	1
EPHA4	GLI1	0.0472	1
POTEG	TPTE	0.0472	1
16q-Del	Del_9p21.3	0.0472	1
9q-Del	Del_14q23.3	0.0472	1
ACSBG1	EPHA7	0.0475	1
ACSBG1	MYO16	0.0475	1
ACSBG1	SLC38A4	0.0475	1
APCS	SLC38A4	0.0475	1
IGF1R	MYO16	0.0475	1
SLC38A4	SYK	0.0475	1
USH2A	USP9X	0.0477	1
TP63	Amp_1p12	0.0478	1
TP63	Del_15q13.3	0.0478	1
7q-Amp	Del_16q12.1	0.0478	1
Del_15q13.3	Del_16q24.3	0.0478	1
CCNA1	KEL	0.0479	1
CDC42BPA	KEL	0.0479	1
FLT1	KIT	0.0479	1
KEL	KRT73	0.0479	1
KEL	RIPK4	0.0479	1
NF1	SELP	0.0479	1
CDC42BPA	THSD7B	0.048	1
CDC42BPA	OR6C74	0.0481	1
CDC42BPA	RB1	0.0481	1
GLI1	NGF	0.0481	1
GLI1	OR6C74	0.0481	1
KRT73	OR6C74	0.0481	1
OR6C74	RIPK4	0.0481	1
7p-Amp	Del_16q12.1	0.0481	1
Amp_1p12	Del_8p23.3	0.0482	1
Amp_1p12	Del_15q21.1	0.0482	1
CDKN2A	USH2A	0.0484	1
CDKN2A	Del_10q21.1	0.0484	1
6p-Amp	Del_15q13.3	0.0485	1
7q-Amp	Del_10q21.1	0.0485	1
DDX3X	KCND2	0.0486	1
KCND2	RAC1	0.0486	1
16q-Del	Del_5q12.1	0.0488	1
Del_6q21	Del_15q13.3	0.0488	1
MLL	TRERF1	0.0489	1
PTPN22	Amp_5p15.33	0.0489	1
17p-Del	Del_5p15.31	0.0489	1
CPA3	Del_10p15.3	0.0491	1
MAN1A1	USP9X	0.0492	1
NUP214	USP9X	0.0492	1
OR4S2	ZFX	0.0492	1
Amp_7p22.1	Amp_12q14.1	0.0492	1
5q-Del	Del_4q34.3	0.0493	1
C7orf58	EPHA6	0.0494	1
7q-Amp	Del_8p23.3	0.0494	1
CNTN5	CTNNB1	0.0497	1
CNTN5	MAP2K1	0.0497	1
KYNU	MAP2K1	0.0497	1
DSG3	Amp_7p22.1	0.0498	1
NRAS	20q-Amp	0.0498	1
11p-Del	Amp_7p22.1	0.0498	1
DCLK3	KYNU	0.0499	1
DCLK3	MAP2K1	0.0499	1
GML	MSTN	0.0499	1
KYNU	POTEG	0.0499	1
8p-Amp	Del_10q23.31	0.0499	1
Amp_15q26.2	Del_2q37.3	0.0499	1
Del_5p15.31	Del_10q23.31	0.0499	1
DMC1	MLL	0.05	1
NRAS	XIRP2	0.05	1
13q-Amp	Amp_1q44	0.05	1
5q-Del	Del_6q26	0.05	1
Amp_4q12	Amp_7p22.1	0.05	1
EMG1	Del_8p23.3	0.0501	1
FRMPD4	NGF	0.0501	1
MYO3B	NGF	0.0501	1
PARM1	SLC9A11	0.0501	1
18p-Del	Amp_20q13.33	0.0501	1
6q-Del	Amp_1q44	0.0501	1
Del_3q13.31	Del_16p13.3	0.0503	1
APC	MSTN	0.0504	1
DSG3	KEL	0.0504	1
KRTAP5-10	PTPN22	0.0504	1
KRTAP5-10	TRERF1	0.0504	1
MSTN	PDGFRA	0.0504	1
PTPN22	SLC27A5	0.0504	1
PTPN22	ZNF780B	0.0504	1
GUCY2F	MYO16	0.0505	1
PARM1	SLC38A4	0.0505	1
C10orf54	EPHA7	0.0506	1
C10orf54	SLC38A4	0.0506	1
OXA1L	SELP	0.0506	1
PTPN11	SELP	0.0506	1
S100A8	SELP	0.0506	1
BTK	FRMPD4	0.0507	1
BTK	MYO3B	0.0507	1
FRMPD4	MAN1A1	0.0507	1
FRMPD4	NUP214	0.0507	1
6p-Amp	16q-Del	0.0507	1
RQCD1	TP63	0.0508	1
RQCD1	8q-Amp	0.0508	1
TP63	11q-Del	0.0509	1
11q-Del	Del_16q24.3	0.0509	1
APC	MPP7	0.0511	1
EPHA6	LGR6	0.0511	1
NAP1L2	RPTN	0.0511	1
THSD7B	USP9X	0.0511	1
Del_4p16.3	Del_5p15.31	0.0511	1
6q-Del	Amp_8q24.21	0.0513	1
HSD11B1	OXA1L	0.0514	1
10p-Del	Amp_20q13.33	0.0514	1
APCS	CPA3	0.0515	1
APCS	CYP3A4	0.0515	1
APCS	DDX3X	0.0515	1
CYP3A4	SYK	0.0515	1
CYP3A5	DDX3X	0.0515	1
IDH1	TTN	0.0516	1
MAN1A1	TTN	0.0516	1
NUP214	TTN	0.0516	1
10p-Del	6p-Del	0.0517	1
RELN	Del_4p16.3	0.0519	1
FRMPD4	SLC9A11	0.0521	1
ATP5F1	PARM1	0.0522	1
C10orf28	CNTN5	0.0522	1
C15orf23	FAM58A	0.0522	1
GNAQ	GUCY2F	0.0522	1
KRAS	13q-Amp	0.0522	1
Amp_5p15.33	Amp_11q13.3	0.0522	1
BRAF	18p-Del	0.0523	1
ARID2	EZH2	0.0524	1
ARID2	GLI1	0.0524	1
C7orf58	CDC42BPA	0.0524	1
C7orf58	GLI1	0.0524	1
ALPK2	C7orf58	0.0526	1
Amp_8q24.21	Amp_20q13.33	0.0526	1
CDKN2A	Del_10q26.3	0.0528	1
Del_5q31.3	Del_15q13.3	0.0529	1
ANO4	HSD11B1	0.053	1
ACSBG1	CNTN5	0.0531	1
9q-Del	Del_1p36.31	0.0532	1
Amp_7q34	Del_16q12.1	0.0532	1
CCNA1	USP17L2	0.0533	1
CDC42BPA	USP17L2	0.0533	1
GLI1	USP17L2	0.0533	1
17p-Del	Amp_15q26.2	0.0533	1
C7orf58	CNTN5	0.0534	1
EPHA7	Del_4p16.3	0.0535	1
NRAS	9p-Del	0.0536	1
SYK	8q-Amp	0.0538	1
OR4S2	TRERF1	0.054	1
PTPN22	USP9X	0.054	1
RELN	STK19	0.054	1
6p-Del	Amp_11q13.3	0.054	1
IDH1	Del_16q23.1	0.0542	1
DDX3X	TTN	0.0545	1
DSG3	RELN	0.0547	1
CYP3A4	MPP7	0.055	1
CYP3A4	Del_4p16.3	0.055	1
DDX3X	MPP7	0.055	1
RAC1	Del_4p16.3	0.055	1
TPTE	USP9X	0.0551	1
ANO4	MYO16	0.0552	1
C7orf58	CDKN2A	0.0554	1
HSD11B1	MPP7	0.0554	1
DCLK3	KRTAP5-10	0.0556	1
FGFR2	KRTAP5-10	0.0556	1
FGFR2	ZNF780B	0.0556	1
Del_3q13.31	Del_10q23.31	0.0556	1
CCK	Amp_6p24.3	0.0557	1
GNAQ	Amp_6p24.3	0.0557	1
KRAS	Amp_6p24.3	0.0557	1
ALPK2	ATP5F1	0.056	1
ALPK2	FAM58A	0.056	1
IGF1R	OR6C74	0.056	1
KRAS	Amp_20q13.33	0.056	1
KRAS	Amp_22q13.2	0.056	1
NGF	SYK	0.056	1
OR6C74	SYK	0.056	1
RQCD1	Amp_1q21.3	0.056	1
APC	COL3A1	0.0561	1
17p-Del	Del_8p23.3	0.0561	1
DSG3	FGFR2	0.0562	1
Amp_1p12	Amp_7q34	0.0562	1
CDKN2A	10q-Del	0.0565	1
CTNNA3	NUP214	0.0566	1
Amp_3p13	Amp_4q12	0.0566	1
Amp_3p13	Amp_12q15	0.0566	1
13q-Amp	16q-Del	0.0567	1
Del_5p15.31	Del_16q24.3	0.0567	1
C10orf54	COL3A1	0.0569	1
COL3A1	OXA1L	0.0569	1
LGR6	USH2A	0.057	1
TP63	17p-Del	0.057	1
7p-Amp	Amp_1p12	0.057	1
17p-Del	Del_16q24.3	0.057	1
C10orf28	OR4S2	0.0572	1
EMG1	OR4S2	0.0572	1
KIT	NF1	0.0572	1
KIT	Del_15q21.1	0.0572	1
11p-Del	Del_16p13.3	0.0573	1
ATP5F1	CPA3	0.0574	1
ATP5F1	LGR6	0.0574	1
ATP5F1	PPP6C	0.0574	1
C10orf28	17p-Del	0.0574	1
CYP3A4	GNAQ	0.0574	1
CYP3A4	Del_16q23.1	0.0574	1
HSD11B1	XIRP2	0.0575	1
KEL	Del_4q34.3	0.0575	1
Del_1p36.31	Del_4q34.3	0.0575	1
HSD11B1	Amp_22q13.2	0.0576	1
C7orf58	FRMPD4	0.0577	1
Amp_1p12	Amp_13q31.3	0.0577	1
Amp_13q31.3	Del_15q13.3	0.0577	1
18p-Del	Del_19p13.3	0.0582	1
KYNU	USP9X	0.0583	1
BTK	OXA1L	0.0584	1
MAN1A1	OXA1L	0.0584	1
NUP214	PTPN11	0.0584	1
S100A8	ZFX	0.0584	1
EPHA4	IGF1R	0.0585	1
EPHA4	SYK	0.0585	1
PDGFRA	SLC38A4	0.0585	1
PTPN22	SLC38A4	0.0585	1
SELP	TRERF1	0.0585	1
SLC38A4	TRERF1	0.0585	1
CCNA1	SLC27A5	0.0588	1
CCNA1	ZNF780B	0.0588	1
CDC42BPA	KRTAP5-10	0.0588	1
GLI1	KRTAP5-10	0.0588	1
GLI1	ZNF780B	0.0588	1
KIT	KRTAP5-10	0.0588	1
KRT73	ZNF780B	0.0588	1
KRTAP5-10	RIPK4	0.0588	1
EPHA4	KCND2	0.0589	1
TP53	Del_4p16.3	0.0589	1
CAMTA1	PTPN22	0.059	1
CAMTA1	TRERF1	0.059	1
NAP1L2	PTPN22	0.059	1
PTEN	Del_5p15.31	0.059	1
CDK4	5q-Del	0.0591	1
CCK	DSG3	0.0592	1
DSG3	FAM58A	0.0592	1
FGFR2	MLL	0.0592	1
MLL	NBPF1	0.0592	1
MLL	POTEG	0.0592	1
MLL	Del_2q37.3	0.0592	1
Amp_5p15.33	Del_2q37.3	0.0592	1
CTNNA3	FLT1	0.0597	1
22q-Amp	Amp_7p22.1	0.0598	1
RQCD1	Del_10q26.3	0.0599	1
TP53	Del_5q12.1	0.0602	1
EPHA4	NRAS	0.0603	1
7p-Amp	Del_13q34	0.0604	1
10q-Del	Del_5p15.31	0.0604	1
ALPK2	MSTN	0.0605	1
MSTN	Amp_20q13.33	0.0605	1
20p-Amp	Del_10q26.3	0.0606	1
FRMPD4	Del_6q26	0.0607	1
Amp_7q34	Del_10q26.3	0.0608	1
Del_3q13.31	Del_11q23.3	0.0609	1
FGFR2	OR4S2	0.061	1
FGFR2	USP9X	0.061	1
OR4S2	POTEG	0.061	1
Amp_7p22.1	Del_16q12.1	0.061	1
CDKN2A	EMG1	0.0612	1
SELP	STK19	0.0612	1
SLC38A4	STK19	0.0612	1
DDX3X	THSD7B	0.0613	1
PPP6C	THSD7B	0.0613	1
RAC1	THSD7B	0.0613	1
Amp_7q34	Del_6q26	0.0615	1
EPHA6	NGF	0.0616	1
CYP3A4	MYO16	0.0618	1
CYP3A4	SELP	0.0618	1
DDX3X	MYO16	0.0618	1
EPHA7	LGR6	0.0618	1
FRMPD4	TTN	0.0618	1
MYO3B	TTN	0.0618	1
RAC1	SELP	0.0618	1
SLC38A4	Amp_6q12	0.0618	1
CNTN5	DDX3X	0.062	1
KIT	Del_15q13.3	0.0622	1
FRMPD4	RELN	0.0623	1
MYO16	SELP	0.0623	1
RPTN	TRERF1	0.0623	1
Del_5p15.31	Del_16q12.1	0.0623	1
Amp_1q44	Amp_22q13.2	0.0626	1
BTK	THSD7B	0.0627	1
CPA3	HSD11B1	0.0627	1
CYP3A4	STK19	0.0627	1
HSD11B1	LGR6	0.0627	1
HSD11B1	RAC1	0.0627	1
PPP6C	STK19	0.0627	1
RAC1	STK19	0.0627	1
ATP5F1	EPHA4	0.0628	1
EPHA4	USP17L2	0.0628	1
KIT	Amp_1q21.3	0.0628	1
8q-Amp	Amp_13q31.3	0.0628	1
Amp_13q31.3	Del_16q24.3	0.0628	1
CTNNB1	FRMPD4	0.0629	1
CTNNB1	MYO3B	0.0629	1
KCND2	ZFX	0.063	1
Amp_1p12	Del_9p23	0.063	1
ACSBG1	KEL	0.0631	1
APCS	KEL	0.0631	1
IGF1R	KEL	0.0631	1
EPHA7	MLL	0.0633	1
EPHA7	17p-Del	0.0633	1
MYO16	17p-Del	0.0633	1
CNTN5	Del_2q37.3	0.0634	1
C10orf54	KEL	0.0635	1
FLT1	OXA1L	0.0635	1
FLT1	S100A8	0.0635	1
KEL	PTPN11	0.0635	1
LGR6	SLC9A11	0.0635	1
PTPN11	Del_1p36.31	0.0635	1
PTEN	5q-Del	0.0636	1
Amp_20q13.33	Del_6q21	0.0636	1
20p-Amp	7q-Amp	0.0639	1
Amp_20q13.33	Del_6q26	0.064	1
CBL	STK19	0.0642	1
PTEN	6p-Amp	0.0642	1
Amp_4q12	Del_6q21	0.0642	1
KYNU	RPTN	0.0643	1
Amp_15q26.2	Del_16q12.1	0.0643	1
MLL	USP17L2	0.0644	1
MLL	Amp_13q31.3	0.0644	1
TPTE	Del_4p16.3	0.0644	1
7p-Amp	Del_1p22.1	0.0644	1
TPTE	Del_6q21	0.0645	1
10p-Del	Amp_1p12	0.0645	1
Del_2q37.3	Del_6q26	0.0646	1
CDKN2A	Del_10q23.31	0.0647	1
10p-Del	Del_16q12.1	0.0647	1
CBL	Amp_17q25.3	0.0648	1
DSG3	MSTN	0.0648	1
MPP7	OR6C74	0.0648	1
NGF	Del_4p16.3	0.0648	1
DMC1	TRERF1	0.0651	1
C10orf28	RPTN	0.0652	1
Amp_7p22.1	Amp_17q25.3	0.0652	1
DSG3	7q-Amp	0.0653	1
Amp_1p12	Amp_5p15.33	0.0653	1
Del_1p36.31	Del_16q24.3	0.0653	1
RQCD1	Del_10q23.31	0.0656	1
20q-Amp	Del_6q21	0.0656	1
6p-Del	9q-Del	0.0656	1
C15orf23	MAN1A1	0.0657	1
C15orf23	NUP214	0.0657	1
GUCY2F	NUP214	0.0657	1
IDH1	PARM1	0.0657	1
PARM1	Amp_4q12	0.0657	1
APCS	USP17L2	0.0659	1
CTNNB1	OXA1L	0.0659	1
CTNNB1	PTPN11	0.0659	1
IGF1R	USP17L2	0.0659	1
ATP5F1	TP63	0.066	1
GNAQ	TP63	0.066	1
GNAQ	8q-Amp	0.066	1
10q-Del	Amp_1p12	0.0661	1
ANO4	FRMPD4	0.0662	1
ANO4	HRAS	0.0665	1
DSG3	9p-Del	0.0665	1
EPHA4	MPP7	0.0665	1
6p-Del	Amp_17q25.3	0.0665	1
Amp_11q13.3	Amp_17q25.3	0.0665	1
OXA1L	USH2A	0.0666	1
PTPN11	USH2A	0.0666	1
16q-Del	Del_5p15.31	0.0666	1
Del_1p36.31	Del_5q12.1	0.0666	1
6q-Del	Amp_7p22.1	0.0667	1
CDKN2A	FGFR2	0.0668	1
CDKN2A	POTEG	0.0668	1
GLI1	Del_19p13.3	0.0668	1
KRTAP5-10	MYO3B	0.0668	1
CDC42BPA	XIRP2	0.067	1
EZH2	XIRP2	0.067	1
ARID2	9q-Del	0.0671	1
ARID2	Amp_1q21.3	0.0671	1
OXA1L	RELN	0.0671	1
RELN	S100A8	0.0671	1
14q-Del	9q-Del	0.0671	1
STK19	16q-Del	0.0673	1
ACSBG1	EPHA6	0.0674	1
EPHA6	IGF1R	0.0674	1
18p-Del	Amp_7q34	0.0674	1
KIT	Amp_5p15.33	0.0675	1
MLL	RIPK4	0.0675	1
Amp_15q26.2	Del_16p13.3	0.0676	1
POTEG	Del_9p23	0.0677	1
MLL	USP9X	0.0679	1
USP9X	20q-Amp	0.0679	1
ARID2	CTNNA3	0.0681	1
CAMTA1	DCLK3	0.0681	1
APCS	KRTAP5-10	0.0682	1
C10orf54	Del_5q12.1	0.0682	1
C7orf58	OXA1L	0.0682	1
CDK4	Del_5q12.1	0.0682	1
IGF1R	MSTN	0.0682	1
IGF1R	ZNF780B	0.0682	1
KRTAP5-10	SYK	0.0682	1
OR4S2	USP9X	0.0682	1
Amp_1q21.3	Del_10p15.3	0.0682	1
13q-Amp	10q-Del	0.0683	1
CCNA1	7q-Amp	0.0684	1
ATP5F1	USP17L2	0.0685	1
CAMTA1	PARM1	0.0685	1
GNAQ	USP17L2	0.0685	1
KRAS	Amp_13q31.3	0.0685	1
PTEN	13q-Amp	0.0685	1
10q-Del	Amp_20q13.33	0.0687	1
BRAF	GLI1	0.0688	1
C7orf58	IGF1R	0.0689	1
SYK	Del_5q12.1	0.0689	1
16q-Del	Del_Xp21.1	0.0689	1
EPHA7	POTEG	0.069	1
POTEG	SLC38A4	0.069	1
SLC38A4	Del_2q37.3	0.069	1
GML	7p-Amp	0.0692	1
Del_3q13.31	Del_6q21	0.0694	1
C15orf23	TTN	0.0695	1
MPP7	RPTN	0.0695	1
MPP7	Del_16q12.1	0.0695	1
Del_1p22.1	Del_14q23.3	0.0695	1
IDH1	MPP7	0.0697	1
IDH1	Del_4p16.3	0.0697	1
MPP7	NUP214	0.0697	1
PTPN11	THSD7B	0.0697	1
S100A8	THSD7B	0.0697	1
Amp_12q15	Amp_17q25.3	0.0697	1
Amp_12q15	Del_4p16.3	0.0697	1
FGFR2	TP63	0.0698	1
NRAS	POTEG	0.0698	1
Amp_6p24.3	Del_Xp21.1	0.0699	1
ANO4	ZFX	0.0701	1
EPHA7	NGF	0.0701	1
MYO16	NGF	0.0701	1
NGF	SELP	0.0701	1
NGF	SLC38A4	0.0701	1
C10orf28	GUCY2F	0.0702	1
GML	KIT	0.0702	1
Amp_15q26.2	Del_16q23.1	0.0702	1
C15orf23	KEL	0.0704	1
FLT1	GUCY2F	0.0704	1
KCND2	USP17L2	0.0704	1
KYNU	Del_5q31.3	0.0704	1
COL3A1	NBPF1	0.0706	1
COL3A1	POTEG	0.0706	1
DSG3	EPHA7	0.0706	1
POTEG	11q-Del	0.0706	1
20p-Amp	11q-Del	0.0706	1
Amp_1q44	Amp_7q34	0.0708	1
Amp_17q25.3	Del_13q34	0.0708	1
DCLK3	Del_11q23.3	0.0709	1
POTEG	Del_11q23.3	0.0709	1
20p-Amp	Del_10q23.31	0.0709	1
EPHA4	HSD11B1	0.071	1
EPHA4	STK19	0.071	1
6p-Amp	Del_1p36.31	0.0711	1
FRMPD4	Amp_7p22.1	0.0712	1
Amp_7p22.1	Amp_15q26.2	0.0713	1
CAMTA1	FLT1	0.0717	1
CAMTA1	KEL	0.0717	1
DMC1	FGFR2	0.0717	1
DMC1	20p-Amp	0.0717	1
PTEN	Del_1p36.31	0.0717	1
20q-Amp	7q-Amp	0.072	1
APC	USH2A	0.0721	1
C7orf58	Del_10q21.1	0.0722	1
8p-Amp	Amp_1q44	0.0723	1
SLC9A11	9q-Del	0.0724	1
10q-Del	Amp_7q34	0.0727	1
CBL	MAN1A1	0.0729	1
CBL	NUP214	0.0729	1
CTNNA3	ZNF780B	0.0729	1
NRAS	6q-Del	0.0729	1
CDK4	Del_8p23.3	0.073	1
CDKN2A	EZH2	0.073	1
COL3A1	EZH2	0.073	1
COL3A1	KIT	0.073	1
KIT	11q-Del	0.073	1
NF1	PTPN11	0.073	1
Del_3q13.31	Del_5q31.3	0.0731	1
DSG3	13q-Amp	0.0733	1
PARM1	TP53	0.0733	1
8q-Amp	Amp_7p22.1	0.0733	1
18p-Del	Del_16p13.3	0.0735	1
SLC27A5	TP63	0.0739	1
CAMTA1	CCNA1	0.0741	1
CAMTA1	CDC42BPA	0.0741	1
CAMTA1	KRT73	0.0741	1
CDC42BPA	NAP1L2	0.0741	1
CDC42BPA	PTEN	0.0741	1
ZNF780B	Del_11q23.3	0.0742	1
DMC1	NRAS	0.0743	1
OXA1L	TPTE	0.0744	1
OXA1L	7p-Amp	0.0744	1
PTPN11	TPTE	0.0744	1
Del_8p23.3	Del_16q12.1	0.0744	1
Del_14q23.3	Del_15q21.1	0.0744	1
MPP7	TP63	0.0745	1
APC	RELN	0.0748	1
BTK	LGR6	0.0749	1
BTK	RAC1	0.0749	1
CPA3	MAN1A1	0.0749	1
CYP3A4	IDH1	0.0749	1
DCLK3	Del_16q12.1	0.0749	1
DDX3X	ZFX	0.0749	1
KCND2	SLC9A11	0.0749	1
LGR6	MAN1A1	0.0749	1
LGR6	NUP214	0.0749	1
LGR6	ZFX	0.0749	1
Amp_6q12	Amp_12q15	0.0749	1
8q-Amp	Del_9p23	0.075	1
BTK	RELN	0.0751	1
NUP214	RELN	0.0751	1
6q-Del	Del_8p23.3	0.0751	1
Amp_6p24.3	Amp_6q12	0.0753	1
TTN	7q-Amp	0.0754	1
5q-Del	Del_11q23.3	0.0755	1
RB1	16q-Del	0.0756	1
Del_3q13.31	Del_15q21.1	0.0756	1
Del_8p23.3	Del_19p13.3	0.0756	1
Del_15q21.1	Del_19p13.3	0.0756	1
OXA1L	TTN	0.0757	1
PTPN11	TTN	0.0757	1
S100A8	TTN	0.0757	1
USH2A	17p-Del	0.0757	1
5q-Del	Del_15q13.3	0.0757	1
Amp_7q34	Amp_20q13.33	0.0758	1
KYNU	7q-Amp	0.0759	1
Amp_6p24.3	Del_15q21.1	0.0759	1
Amp_15q26.2	Del_10q26.3	0.0759	1
17p-Del	Del_9p21.3	0.076	1
Amp_4q12	Amp_20q13.33	0.076	1
Del_8p23.3	Del_10p15.3	0.076	1
FRMPD4	OR4S2	0.0766	1
ANO4	CPA3	0.0767	1
BTK	MYO16	0.0767	1
BTK	SELP	0.0767	1
BTK	SLC38A4	0.0767	1
IDH1	MYO16	0.0767	1
MAN1A1	SELP	0.0767	1
MAN1A1	SLC38A4	0.0767	1
MYO16	Amp_12q15	0.0767	1
SLC38A4	ZFX	0.0767	1
TPTE	Del_10q23.31	0.0767	1
ATP5F1	EPHA6	0.0768	1
11p-Del	Amp_1q44	0.0769	1
14q-Del	Del_5q12.1	0.0769	1
Amp_1p12	Amp_12q14.1	0.077	1
C10orf28	DDX3X	0.0771	1
C7orf58	10q-Del	0.0772	1
10p-Del	Del_Xp21.1	0.0772	1
Del_4p16.3	Del_10q23.31	0.0772	1
DSG3	Del_9p23	0.0773	1
ARID2	TP63	0.0774	1
C7orf58	Del_16q24.3	0.0774	1
8q-Amp	Del_6q26	0.0774	1
APC	GUCY2F	0.0775	1
KYNU	PARM1	0.0775	1
13q-Amp	8p-Amp	0.0775	1
7q-Amp	Amp_1q21.3	0.0776	1
APC	SLC9A11	0.0777	1
KCND2	KYNU	0.0777	1
9q-Del	Amp_7p22.1	0.0777	1
C7orf58	PARM1	0.0779	1
6p-Amp	11q-Del	0.0779	1
HSD11B1	KRTAP5-10	0.0781	1
HSD11B1	SLC27A5	0.0781	1
STK19	ZNF780B	0.0781	1
16q-Del	Del_2q37.3	0.0783	1
20q-Amp	Del_10q26.3	0.0786	1
13q-Amp	Amp_8q24.21	0.0787	1
6p-Amp	Amp_11q13.3	0.0787	1
11q-Del	Del_5q31.3	0.0787	1
DCLK3	PTPN22	0.0788	1
DCLK3	TRERF1	0.0788	1
GLI1	RPTN	0.0788	1
KRT73	RPTN	0.0788	1
POTEG	8p-Amp	0.0788	1
NRAS	Amp_1p12	0.0789	1
KCND2	KRTAP5-10	0.0791	1
KCND2	MSTN	0.0791	1
Amp_8q24.21	Del_4p16.3	0.0791	1
BRAF	C7orf58	0.0792	1
Amp_13q31.3	Del_14q23.3	0.0792	1
Amp_13q31.3	Del_16q12.1	0.0792	1
7q-Amp	Del_13q34	0.0793	1
Amp_17q25.3	Del_6q26	0.0795	1
9p-Del	Del_15q13.3	0.0797	1
FAM58A	USH2A	0.0798	1
6p-Amp	Del_10p15.3	0.0799	1
CNTN5	Del_12q23.3	0.0803	1
Del_1p36.31	Del_6q21	0.0803	1
ARID2	NAP1L2	0.0805	1
ARID2	PTEN	0.0805	1
C7orf58	CAMTA1	0.0805	1
C7orf58	NAP1L2	0.0805	1
PTEN	Del_5q12.1	0.0805	1
CAMTA1	RAC1	0.0806	1
EPHA7	Del_12q23.3	0.0806	1
HSD11B1	KEL	0.0806	1
KRAS	Del_Xp21.1	0.0806	1
LGR6	NAP1L2	0.0806	1
NAP1L2	RAC1	0.0806	1
NRAS	TP53	0.0806	1
PPP6C	22q-Amp	0.0806	1
10q-Del	Del_4p16.3	0.0806	1
Del_5q12.1	Del_Xp21.1	0.0806	1
Amp_7q34	Del_10q23.31	0.081	1
ACSBG1	DMC1	0.0812	1
CYP3A5	Del_15q13.3	0.0813	1
CTNNB1	Amp_8q24.21	0.0814	1
KEL	MPP7	0.0814	1
Del_1p36.31	Del_4p16.3	0.0814	1
C7orf58	Del_10q23.31	0.0815	1
COL3A1	MAP2K1	0.0816	1
NUDT11	Del_16p13.3	0.0816	1
OXA1L	Amp_12q14.1	0.0816	1
APC	EZH2	0.0817	1
APC	KIT	0.0817	1
APC	RIPK4	0.0817	1
CDC42BPA	TRERF1	0.0817	1
CNTN5	EPHA4	0.0817	1
KIT	PTPN22	0.0817	1
MYO16	RPTN	0.0817	1
PDGFRA	RIPK4	0.0817	1
PTPN22	RIPK4	0.0817	1
SELP	Del_16q12.1	0.0817	1
MAP2K1	OR6C74	0.082	1
OR6C74	Amp_15q26.2	0.082	1
BTK	DSG3	0.0821	1
BTK	TP53	0.0821	1
CYP3A5	Del_19p13.3	0.0821	1
FRMPD4	MPP7	0.0821	1
MYO3B	Del_4p16.3	0.0821	1
NUP214	TP53	0.0821	1
SYK	Del_19p13.3	0.0821	1
Del_2q37.3	Del_10p15.3	0.0821	1
CCNA1	CDC42BPA	0.0823	1
CCNA1	EZH2	0.0823	1
CDC42BPA	GLI1	0.0823	1
CDC42BPA	KIT	0.0823	1
CDC42BPA	KRT73	0.0823	1
GLI1	KIT	0.0823	1
GLI1	KRT73	0.0823	1
Amp_12q14.1	Del_12q23.3	0.0823	1
IGF1R	Amp_8q24.21	0.0825	1
SYK	Amp_8q24.21	0.0825	1
20q-Amp	Amp_7p22.1	0.0825	1
Amp_5p15.33	Amp_7p22.1	0.0825	1
FRMPD4	11p-Del	0.0826	1
ATP5F1	THSD7B	0.0828	1
EPHA6	USP17L2	0.0828	1
FAM58A	THSD7B	0.0828	1
C10orf54	17p-Del	0.0831	1
C7orf58	SLC9A11	0.0831	1
MLL	OXA1L	0.0831	1
SLC9A11	Del_5q12.1	0.0831	1
TPTE	USP17L2	0.0831	1
10q-Del	Amp_13q31.3	0.0832	1
6q-Del	Amp_7q34	0.0832	1
USH2A	Del_4p16.3	0.0834	1
9q-Del	Amp_1q21.3	0.0834	1
Del_4p16.3	Del_10q21.1	0.0834	1
TP53	Amp_1p12	0.0835	1
11p-Del	Del_15q13.3	0.0835	1
Del_2q37.3	Del_16q23.1	0.0836	1
MYO3B	17p-Del	0.0837	1
ALPK2	DMC1	0.0839	1
ALPK2	GML	0.0839	1
DMC1	Amp_20q13.33	0.0839	1
DMC1	Amp_22q13.2	0.0839	1
GUCY2F	RELN	0.0841	1
PARM1	RELN	0.0841	1
MPP7	Del_9p21.3	0.0845	1
BTK	EPHA4	0.0846	1
EPHA4	MAN1A1	0.0846	1
EPHA4	ZFX	0.0846	1
KEL	PDGFRA	0.0848	1
KEL	TRERF1	0.0848	1
SLC27A5	Del_9p23	0.0849	1
CTNNA3	USP9X	0.0851	1
Amp_15q26.2	Del_10q23.31	0.0851	1
CPA3	KEL	0.0854	1
FLT1	LGR6	0.0854	1
KRTAP5-10	MPP7	0.0857	1
KYNU	MPP7	0.0857	1
17p-Del	Amp_22q13.2	0.0857	1
COL3A1	CPA3	0.0858	1
COL3A1	DDX3X	0.0858	1
COL3A1	LGR6	0.0858	1
COL3A1	Amp_17q25.3	0.0858	1
13q-Amp	Del_15q21.1	0.0858	1
11q-Del	Del_4p16.3	0.0858	1
NUP214	TPTE	0.086	1
TPTE	ZFX	0.086	1
11p-Del	Amp_6p24.3	0.086	1
Amp_1p12	Del_6q26	0.0861	1
5q-Del	Amp_5p15.33	0.0862	1
CNTN5	OXA1L	0.0863	1
Amp_3p13	Del_3q13.31	0.0863	1
CAMTA1	CCK	0.0864	1
FAM58A	NAP1L2	0.0864	1
NRAS	9q-Del	0.0865	1
CDKN2A	20q-Amp	0.0867	1
CTNNB1	6q-Del	0.0868	1
Amp_7q34	Del_13q34	0.0868	1
COL3A1	NGF	0.087	1
EPHA6	HRAS	0.087	1
PARM1	TP63	0.087	1
TP63	13q-Amp	0.087	1
13q-Amp	8q-Amp	0.087	1
DCLK3	GUCY2F	0.0871	1
GUCY2F	POTEG	0.0871	1
13q-Amp	20p-Amp	0.0871	1
13q-Amp	Del_2q37.3	0.0871	1
RQCD1	10p-Del	0.0872	1
KEL	NGF	0.0873	1
Amp_13q31.3	Del_16q23.1	0.0873	1
ACSBG1	6q-Del	0.0874	1
11q-Del	Del_3q13.31	0.0874	1
Del_10p15.3	Del_Xp21.1	0.0875	1
Amp_15q26.2	Del_10q21.1	0.0876	1
ARID2	STK19	0.0877	1
ACSBG1	17p-Del	0.0879	1
APCS	MLL	0.0879	1
CYP3A5	MLL	0.0879	1
GLI1	RELN	0.0879	1
CYP3A4	MAP2K1	0.0881	1
MAP2K1	PPP6C	0.0881	1
MAP2K1	Amp_6q12	0.0881	1
14q-Del	Del_15q21.1	0.0882	1
SLC9A11	Del_1p22.1	0.0883	1
6p-Amp	Amp_17q25.3	0.0883	1
BTK	KRTAP5-10	0.0884	1
CDKN2A	S100A8	0.0884	1
IDH1	SLC27A5	0.0884	1
KRTAP5-10	MAN1A1	0.0884	1
KRTAP5-10	NUP214	0.0884	1
KRTAP5-10	ZFX	0.0884	1
MAN1A1	SLC27A5	0.0884	1
NUP214	SLC27A5	0.0884	1
BRAF	CDKN2A	0.0885	1
CAMTA1	FRMPD4	0.0886	1
FRMPD4	NAP1L2	0.0886	1
ACSBG1	TTN	0.0889	1
APCS	TTN	0.0889	1
IGF1R	TTN	0.0889	1
IDH1	XIRP2	0.089	1
Amp_4q12	Del_6q26	0.0892	1
SLC27A5	9q-Del	0.0893	1
7p-Amp	Amp_8q24.21	0.0895	1
TP63	7q-Amp	0.0896	1
C10orf54	XIRP2	0.0897	1
DCLK3	EZH2	0.0897	1
FGFR2	GLI1	0.0897	1
GLI1	NBPF1	0.0897	1
GLI1	POTEG	0.0897	1
KIT	NBPF1	0.0897	1
KIT	POTEG	0.0897	1
POTEG	RIPK4	0.0897	1
Del_5q31.3	Del_16q12.1	0.0897	1
C10orf54	PARM1	0.0899	1
C15orf23	PTPN11	0.0899	1
C15orf23	S100A8	0.0899	1
OXA1L	PARM1	0.0899	1
OXA1L	13q-Amp	0.0899	1
PARM1	S100A8	0.0899	1
PTEN	Del_8p23.3	0.0899	1
22q-Amp	Del_8p23.3	0.0899	1
ANO4	KYNU	0.09	1
TPTE	Del_10q21.1	0.09	1
TRERF1	Del_12q23.3	0.09	1
Del_5p15.31	Del_12q23.3	0.09	1
GUCY2F	OR4S2	0.0902	1
MYO16	Del_10p15.3	0.0902	1
CTNNB1	Del_9p21.3	0.0903	1
DCLK3	Del_2q37.3	0.0904	1
EPHA6	HSD11B1	0.0904	1
EPHA6	STK19	0.0904	1
MYO16	Amp_1q44	0.0904	1
20p-Amp	18p-Del	0.0904	1
GML	USH2A	0.0907	1
ACSBG1	CAMTA1	0.0908	1
ACSBG1	NAP1L2	0.0908	1
APCS	CAMTA1	0.0908	1
CAMTA1	CYP3A5	0.0908	1
CAMTA1	IGF1R	0.0908	1
CAMTA1	SYK	0.0908	1
APC	LGR6	0.091	1
APC	PPP6C	0.091	1
CCNA1	SLC9A11	0.091	1
CDC42BPA	SLC9A11	0.091	1
CPA3	PDGFRA	0.091	1
CPA3	TRERF1	0.091	1
LGR6	PTPN22	0.091	1
PDGFRA	Amp_6q12	0.091	1
PTPN22	RAC1	0.091	1
RAC1	8p-Amp	0.091	1
TP63	Del_15q21.1	0.091	1
C7orf58	Amp_7p22.1	0.0911	1
OR6C74	USP9X	0.0914	1
RB1	USP9X	0.0914	1
Amp_12q14.1	Del_6q21	0.0915	1
PPP6C	TP53	0.0916	1
EMG1	11p-Del	0.0917	1
Amp_6p24.3	Del_16q12.1	0.0917	1
CAMTA1	CNTN5	0.0918	1
Amp_7q34	Del_15q21.1	0.0918	1
6q-Del	Amp_1p12	0.0922	1
ARID2	MPP7	0.0923	1
MPP7	Del_5q12.1	0.0923	1
14q-Del	Del_1p22.1	0.0923	1
EPHA7	SLC27A5	0.0924	1
EPHA7	ZNF780B	0.0924	1
KRTAP5-10	SELP	0.0924	1
KYNU	9q-Del	0.0924	1
MSTN	MYO16	0.0924	1
MSTN	SELP	0.0924	1
9q-Del	Amp_15q26.2	0.0924	1
CCK	Del_5q31.3	0.0926	1
APC	FAM58A	0.0927	1
ARID2	Del_6q26	0.0927	1
ATP5F1	PDGFRA	0.0927	1
ATP5F1	TRERF1	0.0927	1
CCK	PTPN22	0.0927	1
FAM58A	TRERF1	0.0927	1
GNAQ	8p-Amp	0.0927	1
DMC1	HSD11B1	0.0928	1
POTEG	SLC9A11	0.0928	1
KYNU	THSD7B	0.0929	1
NBPF1	RELN	0.0931	1
RELN	20p-Amp	0.0931	1
FRMPD4	SELP	0.0932	1
Del_1p36.31	Del_10p15.3	0.0932	1
ARID2	NGF	0.0934	1
C7orf58	OR6C74	0.0934	1
RQCD1	Del_5q12.1	0.0934	1
20q-Amp	Del_19p13.3	0.0935	1
17p-Del	Del_19p13.3	0.0935	1
KEL	SELP	0.0938	1
OXA1L	RPTN	0.0939	1
RPTN	S100A8	0.0939	1
KCND2	USP9X	0.094	1
EPHA6	NBPF1	0.0941	1
ARID2	CPA3	0.0942	1
ARID2	CYP3A4	0.0942	1
C7orf58	CPA3	0.0942	1
C7orf58	LGR6	0.0942	1
CPA3	Del_5q12.1	0.0942	1
CYP3A4	Del_5q12.1	0.0942	1
MPP7	Del_9p23	0.0943	1
20q-Amp	Del_10q23.31	0.0944	1
BRAF	Del_1p22.1	0.0945	1
Amp_3p13	Amp_17q25.3	0.0945	1
RPTN	9q-Del	0.0947	1
Amp_1q44	Del_3q13.31	0.0947	1
ARID2	PDGFRA	0.0948	1
BTK	USP17L2	0.0949	1
MAN1A1	USP17L2	0.0949	1
Del_5p15.31	Del_10q26.3	0.0949	1
ACSBG1	CCNA1	0.095	1
ACSBG1	CDC42BPA	0.095	1
ACSBG1	KRT73	0.095	1
ANO4	6q-Del	0.095	1
APCS	KIT	0.095	1
CYP3A5	GLI1	0.095	1
IGF1R	KIT	0.095	1
IGF1R	RIPK4	0.095	1
KIT	SYK	0.095	1
KRT73	SYK	0.095	1
Amp_1p12	Del_6q21	0.0952	1
BTK	TP63	0.0953	1
Amp_4q12	Del_16q24.3	0.0953	1
CBL	NRAS	0.0954	1
Del_10p15.3	Del_15q13.3	0.0955	1
1q-Amp	Del_13q34	0.0956	1
20p-Amp	Del_10q21.1	0.0957	1
CNTN5	MLL	0.0965	1
Amp_6p24.3	Del_10q26.3	0.0965	1
TPTE	16q-Del	0.0966	1
Amp_6p24.3	Del_4q34.3	0.0966	1
FRMPD4	7q-Amp	0.0968	1
DSG3	17p-Del	0.097	1
Amp_15q26.2	Amp_20q13.33	0.0972	1
Del_1p36.31	Del_11q23.3	0.0973	1
C15orf23	TPTE	0.0974	1
ARID2	NRAS	0.0976	1
Del_5p15.31	Del_6q26	0.0976	1
CPA3	10q-Del	0.0977	1
6p-Amp	Del_10q21.1	0.0978	1
CTNNA3	17p-Del	0.0979	1
MPP7	Del_6q21	0.0981	1
Del_1p22.1	Del_6q21	0.0981	1
Del_4p16.3	Del_6q21	0.0981	1
DSG3	Amp_3p13	0.0983	1
11p-Del	5q-Del	0.0983	1
C10orf54	DDX3X	0.0985	1
OXA1L	RAC1	0.0985	1
PTPN11	RAC1	0.0985	1
GLI1	TPTE	0.0987	1
KIT	TPTE	0.0987	1
FGFR2	KEL	0.099	1
10p-Del	Del_5p15.31	0.099	1
18p-Del	Del_4q34.3	0.099	1
6q-Del	Del_5p15.31	0.099	1
TP63	7p-Amp	0.0991	1
6p-Amp	10p-Del	0.0991	1
CCK	FGFR2	0.0992	1
FAM58A	FGFR2	0.0992	1
GNAQ	POTEG	0.0992	1
KRAS	20p-Amp	0.0992	1
KRTAP5-10	KYNU	0.0992	1
KYNU	MSTN	0.0992	1
KYNU	ZNF780B	0.0992	1
MAP2K1	SLC27A5	0.0992	1
Amp_6p24.3	Amp_12q14.1	0.0992	1
EPHA4	MAP2K1	0.0993	1
Amp_5p15.33	Del_4q34.3	0.0993	1
13q-Amp	Del_10q26.3	0.0994	1
C15orf23	USH2A	0.0995	1
6p-Del	Del_10q23.31	0.0996	1
CNTN5	FRMPD4	0.0997	1
NF1	NGF	0.0997	1
NF1	RB1	0.0997	1
ACSBG1	TRERF1	0.1	1
APC	APCS	0.1	1
APC	SYK	0.1	1
APCS	PDGFRA	0.1	1
COL3A1	IGF1R	0.1	1
COL3A1	SYK	0.1	1
CTNNB1	Del_6q21	0.1	1
HRAS	KRTAP5-10	0.1	1
IDH1	KEL	0.1	1
IGF1R	PDGFRA	0.1	1
IGF1R	TRERF1	0.1	1
SYK	TRERF1	0.1	1
SYK	Del_11q23.3	0.1	1
Amp_7q34	Del_9p23	0.1	1
Del_5q12.1	Del_15q13.3	0.1	1
COL3A1	FAM58A	0.101	1
COL3A1	GNAQ	0.101	1
KCND2	Amp_1p12	0.101	1
RB1	Del_16p13.3	0.101	1
Amp_6p24.3	Amp_11q13.3	0.101	1
ACSBG1	RPTN	0.102	1
APCS	Del_16q12.1	0.102	1
CPA3	FGFR2	0.102	1
CPA3	USP9X	0.102	1
CYP3A4	NBPF1	0.102	1
CYP3A5	RPTN	0.102	1
DCLK3	LGR6	0.102	1
LGR6	OR4S2	0.102	1
NBPF1	RAC1	0.102	1
OR4S2	PPP6C	0.102	1
RELN	RQCD1	0.102	1
SYK	Del_16q12.1	0.102	1
20p-Amp	Amp_6p24.3	0.102	1
18p-Del	Amp_6p24.3	0.102	1
6p-Del	Del_4q34.3	0.102	1
Amp_3p13	Amp_12q14.1	0.102	1
BRAF	USH2A	0.103	1
MPP7	OR4S2	0.103	1
SELP	11q-Del	0.103	1
13q-Amp	20q-Amp	0.103	1
18p-Del	Del_13q34	0.103	1
9q-Del	Amp_1q44	0.103	1
Amp_7q34	Del_4p16.3	0.103	1
ANO4	GLI1	0.104	1
BRAF	22q-Amp	0.104	1
CNTN5	MAN1A1	0.104	1
CPA3	NF1	0.104	1
RQCD1	Del_10p15.3	0.104	1
THSD7B	Del_11q23.3	0.104	1
TP63	16q-Del	0.104	1
1q-Amp	7q-Amp	0.104	1
11q-Del	Amp_7q34	0.104	1
Amp_17q25.3	Del_8p23.3	0.104	1
Del_4p16.3	Del_15q21.1	0.104	1
C10orf28	TTN	0.105	1
CNTN5	Amp_13q31.3	0.105	1
CPA3	NRAS	0.105	1
CYP3A5	XIRP2	0.105	1
DDX3X	NRAS	0.105	1
EMG1	TTN	0.105	1
EPHA4	PDGFRA	0.105	1
GML	NUP214	0.105	1
KRAS	1q-Amp	0.105	1
SLC27A5	Del_9p21.3	0.105	1
8p-Amp	Amp_11q13.3	0.105	1
8p-Amp	Amp_22q13.2	0.105	1
17p-Del	Amp_1q44	0.105	1
6p-Del	Del_5p15.31	0.105	1
CCK	Del_13q34	0.106	1
CNTN5	SELP	0.106	1
FRMPD4	11q-Del	0.106	1
NUDT11	Del_Xp21.1	0.106	1
RB1	Del_15q13.3	0.106	1
Del_16q23.1	Del_Xp21.1	0.106	1
CTNNA3	SELP	0.107	1
EPHA4	OXA1L	0.107	1
KIT	MYO3B	0.107	1
KRT73	MYO3B	0.107	1
MYO3B	RIPK4	0.107	1
TP63	9p-Del	0.107	1
16q-Del	Del_4q34.3	0.107	1
C15orf23	MYO3B	0.108	1
CCNA1	STK19	0.108	1
CDC42BPA	STK19	0.108	1
CDK4	Amp_7p22.1	0.108	1
CYP3A4	TP63	0.108	1
CYP3A4	Del_16q24.3	0.108	1
DDX3X	RELN	0.108	1
HSD11B1	KIT	0.108	1
KCND2	Del_4p16.3	0.108	1
KRT73	STK19	0.108	1
LGR6	RELN	0.108	1
OXA1L	Amp_7p22.1	0.108	1
PTEN	Amp_13q31.3	0.108	1
RAC1	8q-Amp	0.108	1
7q-Amp	Amp_8q24.21	0.108	1
Amp_7p22.1	Del_19p13.3	0.108	1
ACSBG1	APCS	0.109	1
APCS	Del_16q23.1	0.109	1
ARID2	BTK	0.109	1
C7orf58	ZFX	0.109	1
CYP3A5	DCLK3	0.109	1
CYP3A5	NBPF1	0.109	1
DCLK3	IGF1R	0.109	1
HSD11B1	22q-Amp	0.109	1
IGF1R	SYK	0.109	1
STK19	USH2A	0.109	1
USH2A	USP17L2	0.109	1
11q-Del	Amp_6p24.3	0.109	1
14q-Del	Amp_12q15	0.109	1
Amp_6p24.3	Del_9p21.3	0.109	1
Amp_12q15	Del_5q12.1	0.109	1
Del_1p22.1	Del_3q13.31	0.109	1
ARID2	DCLK3	0.11	1
ARID2	FGFR2	0.11	1
ARID2	NBPF1	0.11	1
MSTN	OR4S2	0.11	1
MSTN	USP9X	0.11	1
OR4S2	ZNF780B	0.11	1
POTEG	Del_5q12.1	0.11	1
SLC27A5	USP9X	0.11	1
USP9X	ZNF780B	0.11	1
USP9X	Amp_8q24.21	0.11	1
1q-Amp	10q-Del	0.11	1
22q-Amp	Amp_5p15.33	0.11	1
7q-Amp	Amp_22q13.2	0.11	1
10q-Del	Del_13q34	0.11	1
5q-Del	Del_14q23.3	0.11	1
Amp_7p22.1	Del_15q21.1	0.11	1
ALPK2	EZH2	0.111	1
ARID2	1q-Amp	0.111	1
C15orf23	NGF	0.111	1
CTNNB1	USP17L2	0.111	1
CYP3A4	6q-Del	0.111	1
GUCY2F	OR6C74	0.111	1
GUCY2F	RQCD1	0.111	1
KIT	Amp_20q13.33	0.111	1
USH2A	Del_4q34.3	0.111	1
ANO4	USP9X	0.112	1
C15orf23	CDKN2A	0.112	1
C7orf58	EPHA4	0.112	1
CBL	TPTE	0.112	1
CDKN2A	Del_4q34.3	0.112	1
OR6C74	TPTE	0.112	1
13q-Amp	Del_10q23.31	0.112	1
7p-Amp	11q-Del	0.112	1
17p-Del	Del_6q26	0.112	1
6p-Del	Del_5q12.1	0.112	1
Amp_13q31.3	Del_6q26	0.112	1
ATP5F1	FRMPD4	0.113	1
EPHA7	OR4S2	0.113	1
FAM58A	MYO3B	0.113	1
OR4S2	SLC38A4	0.113	1
OR6C74	USH2A	0.113	1
ARID2	MLL	0.114	1
ATP5F1	RELN	0.114	1
CNTN5	PDGFRA	0.114	1
CNTN5	TRERF1	0.114	1
CYP3A4	Del_12q23.3	0.114	1
KEL	TP53	0.114	1
KRAS	RELN	0.114	1
KYNU	7p-Amp	0.114	1
MYO16	1q-Amp	0.114	1
RELN	Del_12q23.3	0.114	1
TP53	Del_4q34.3	0.114	1
11p-Del	Del_1p36.31	0.114	1
11p-Del	Del_4q34.3	0.114	1
14q-Del	Amp_5p15.33	0.114	1
Amp_22q13.2	Del_14q23.3	0.114	1
Del_8p23.3	Del_15q13.3	0.114	1
Del_9p21.3	Del_16p13.3	0.114	1
APC	CTNNA3	0.115	1
CAMTA1	EMG1	0.115	1
CTNNA3	PDGFRA	0.115	1
CTNNA3	PTPN22	0.115	1
NRAS	TRERF1	0.115	1
TP53	TRERF1	0.115	1
TP63	1q-Amp	0.115	1
1q-Amp	Del_16q24.3	0.115	1
8p-Amp	11p-Del	0.115	1
CCNA1	CTNNA3	0.116	1
CDC42BPA	CNTN5	0.116	1
CDC42BPA	CTNNA3	0.116	1
CDC42BPA	TTN	0.116	1
CNTN5	RIPK4	0.116	1
CTNNA3	GLI1	0.116	1
CTNNA3	RIPK4	0.116	1
FRMPD4	NBPF1	0.116	1
KRT73	TTN	0.116	1
OXA1L	USP17L2	0.116	1
OXA1L	Amp_13q31.3	0.116	1
PTEN	8q-Amp	0.116	1
6p-Amp	10q-Del	0.116	1
7p-Amp	Amp_22q13.2	0.116	1
APCS	SLC9A11	0.117	1
EPHA6	ZFX	0.117	1
HRAS	RELN	0.117	1
TPTE	Del_16q23.1	0.117	1
6p-Del	Amp_7p22.1	0.117	1
Amp_1p12	Amp_17q25.3	0.117	1
Amp_4q12	Del_19p13.3	0.117	1
BTK	NF1	0.118	1
C15orf23	GUCY2F	0.118	1
CBL	THSD7B	0.118	1
CCNA1	DSG3	0.118	1
CDK4	Amp_8q24.21	0.118	1
DSG3	GLI1	0.118	1
EPHA4	FGFR2	0.118	1
EPHA4	NBPF1	0.118	1
GLI1	TP53	0.118	1
GUCY2F	PARM1	0.118	1
KIT	11p-Del	0.118	1
MAN1A1	NF1	0.118	1
NF1	11q-Del	0.118	1
RIPK4	TP53	0.118	1
RIPK4	11p-Del	0.118	1
ARID2	Amp_6p24.3	0.119	1
ATP5F1	CTNNA3	0.119	1
CDC42BPA	HRAS	0.119	1
CDKN2A	STK19	0.119	1
EPHA4	Del_6q21	0.119	1
GML	Del_11q23.3	0.119	1
HRAS	KRT73	0.119	1
RAC1	Amp_1q21.3	0.119	1
SYK	Del_12q23.3	0.119	1
1q-Amp	11q-Del	0.119	1
10p-Del	Amp_12q14.1	0.119	1
6p-Del	Del_11q23.3	0.119	1
Amp_6q12	Del_6q26	0.119	1
ACSBG1	RELN	0.12	1
APCS	RELN	0.12	1
CTNNA3	TP63	0.12	1
IGF1R	RELN	0.12	1
NRAS	6p-Amp	0.12	1
NRAS	5q-Del	0.12	1
NRAS	Amp_20q13.33	0.12	1
PTPN22	STK19	0.12	1
PTPN22	XIRP2	0.12	1
RELN	SYK	0.12	1
TRERF1	XIRP2	0.12	1
11p-Del	Amp_8q24.21	0.12	1
Del_6q21	Del_13q34	0.12	1
ALPK2	USP9X	0.121	1
ARID2	6q-Del	0.121	1
C7orf58	16q-Del	0.121	1
C7orf58	Del_9p23	0.121	1
CTNNB1	8q-Amp	0.121	1
8p-Amp	Amp_13q31.3	0.121	1
ALPK2	Amp_17q25.3	0.122	1
ARID2	MSTN	0.122	1
BTK	KRT73	0.122	1
BTK	RIPK4	0.122	1
C7orf58	KRTAP5-10	0.122	1
C7orf58	SLC27A5	0.122	1
CCNA1	NUP214	0.122	1
CPA3	RQCD1	0.122	1
CYP3A4	OR6C74	0.122	1
CYP3A4	RQCD1	0.122	1
DDX3X	OR6C74	0.122	1
EZH2	MAN1A1	0.122	1
EZH2	NUP214	0.122	1
GLI1	NUP214	0.122	1
GLI1	Amp_4q12	0.122	1
KRT73	ZFX	0.122	1
KYNU	Del_4q34.3	0.122	1
LGR6	OR6C74	0.122	1
LGR6	RQCD1	0.122	1
MPP7	Del_4p16.3	0.122	1
NGF	Amp_6q12	0.122	1
PARM1	RPTN	0.122	1
PARM1	Del_16q12.1	0.122	1
PPP6C	RQCD1	0.122	1
RAC1	RQCD1	0.122	1
RB1	Amp_6q12	0.122	1
RIPK4	ZFX	0.122	1
13q-Amp	Del_16q12.1	0.122	1
17p-Del	Del_6q21	0.122	1
5q-Del	Del_16q24.3	0.122	1
Amp_13q31.3	Del_10q26.3	0.122	1
Amp_15q26.2	Del_4q34.3	0.122	1
APC	C10orf28	0.123	1
C10orf28	NRAS	0.123	1
C10orf28	PDGFRA	0.123	1
C10orf28	TRERF1	0.123	1
COL3A1	KRTAP5-10	0.123	1
OR4S2	USH2A	0.123	1
POTEG	Del_8p23.3	0.123	1
ZNF780B	11q-Del	0.123	1
20p-Amp	Del_15q21.1	0.123	1
14q-Del	Del_11q23.3	0.123	1
5q-Del	Del_16q23.1	0.123	1
Del_2q37.3	Del_8p23.3	0.123	1
ACSBG1	STK19	0.124	1
ALPK2	OXA1L	0.124	1
APCS	HSD11B1	0.124	1
CPA3	MLL	0.124	1
CYP3A5	STK19	0.124	1
FAM58A	TPTE	0.124	1
FGFR2	Amp_20q13.33	0.124	1
GNAQ	7p-Amp	0.124	1
HRAS	TPTE	0.124	1
HSD11B1	IGF1R	0.124	1
HSD11B1	SYK	0.124	1
KRAS	TPTE	0.124	1
LGR6	MLL	0.124	1
NBPF1	Amp_22q13.2	0.124	1
RAC1	TPTE	0.124	1
RIPK4	Del_10p15.3	0.124	1
STK19	SYK	0.124	1
Amp_8q24.21	Del_19p13.3	0.124	1
Amp_20q13.33	Del_Xp21.1	0.124	1
Del_3q13.31	Del_16q23.1	0.124	1
Del_10q21.1	Del_13q34	0.124	1
EZH2	KCND2	0.125	1
22q-Amp	Del_4p16.3	0.125	1
CPA3	FRMPD4	0.126	1
FAM58A	KCND2	0.126	1
KEL	Del_16q12.1	0.126	1
1q-Amp	Del_10q21.1	0.126	1
10p-Del	Amp_7q34	0.126	1
C7orf58	Del_12q23.3	0.127	1
CBL	RPTN	0.127	1
NGF	RPTN	0.127	1
RB1	Del_16q12.1	0.127	1
SYK	Amp_6p24.3	0.127	1
Del_5q12.1	Del_13q34	0.127	1
BRAF	CYP3A5	0.128	1
CDKN2A	14q-Del	0.128	1
CDKN2A	Del_5q12.1	0.128	1
FRMPD4	6p-Amp	0.128	1
OR4S2	USP17L2	0.128	1
1q-Amp	7p-Amp	0.128	1
Amp_1q44	Del_10q26.3	0.128	1
APCS	HRAS	0.129	1
BTK	NAP1L2	0.129	1
CNTN5	OR6C74	0.129	1
CNTN5	RB1	0.129	1
CNTN5	RQCD1	0.129	1
CTNNB1	XIRP2	0.129	1
HRAS	IGF1R	0.129	1
KYNU	XIRP2	0.129	1
MAN1A1	NAP1L2	0.129	1
MAP2K1	XIRP2	0.129	1
MLL	PTPN22	0.129	1
MLL	8p-Amp	0.129	1
OR4S2	RELN	0.129	1
PDGFRA	17p-Del	0.129	1
TP63	Amp_7q34	0.129	1
TRERF1	17p-Del	0.129	1
8p-Amp	Amp_5p15.33	0.129	1
8q-Amp	Amp_7q34	0.129	1
8q-Amp	Del_6q21	0.129	1
Amp_1p12	Del_15q13.3	0.129	1
Amp_6p24.3	Amp_22q13.2	0.129	1
C10orf54	TP53	0.13	1
CDK4	11p-Del	0.13	1
DMC1	USP9X	0.13	1
DSG3	OR4S2	0.13	1
DSG3	OXA1L	0.13	1
DSG3	PTPN11	0.13	1
FRMPD4	SYK	0.13	1
GML	OR4S2	0.13	1
KRTAP5-10	Del_8p23.3	0.13	1
NF1	ZNF780B	0.13	1
NF1	1q-Amp	0.13	1
OR4S2	TP53	0.13	1
PTEN	Amp_6p24.3	0.13	1
TP53	USP9X	0.13	1
TP63	Del_9p23	0.13	1
TPTE	Del_6q26	0.13	1
1q-Amp	Del_8p23.3	0.13	1
20q-Amp	Del_1p22.1	0.13	1
17p-Del	Amp_17q25.3	0.13	1
Amp_5p15.33	Amp_17q25.3	0.13	1
C10orf28	FGFR2	0.131	1
C10orf28	NBPF1	0.131	1
COL3A1	TRERF1	0.131	1
MYO3B	Del_1p36.31	0.131	1
PDGFRA	11q-Del	0.131	1
TP63	10q-Del	0.131	1
Amp_1q44	Del_9p21.3	0.131	1
Amp_5p15.33	Del_11q23.3	0.131	1
Amp_11q13.3	Del_16q24.3	0.131	1
ARID2	Amp_15q26.2	0.132	1
C7orf58	DSG3	0.132	1
C7orf58	Amp_15q26.2	0.132	1
CBL	6p-Del	0.132	1
FRMPD4	Del_12q23.3	0.132	1
13q-Amp	Del_6q21	0.132	1
13q-Amp	Del_16q23.1	0.132	1
14q-Del	Amp_13q31.3	0.132	1
6p-Del	Del_16p13.3	0.132	1
Amp_11q13.3	Amp_12q14.1	0.132	1
Del_5p15.31	Del_10p15.3	0.132	1
ANO4	CYP3A5	0.133	1
C15orf23	RAC1	0.133	1
CDC42BPA	8q-Amp	0.133	1
CPA3	GUCY2F	0.133	1
CPA3	PARM1	0.133	1
GUCY2F	PPP6C	0.133	1
MYO16	Amp_1p12	0.133	1
POTEG	Del_6q26	0.133	1
20p-Amp	Del_6q26	0.133	1
6q-Del	Del_3q13.31	0.133	1
Amp_7q34	Del_10p15.3	0.133	1
ATP5F1	Amp_17q25.3	0.134	1
CDKN2A	DDX3X	0.134	1
CDKN2A	RAC1	0.134	1
CPA3	Del_10q21.1	0.134	1
FAM58A	MPP7	0.134	1
GNAQ	Del_4p16.3	0.134	1
GUCY2F	ZNF780B	0.134	1
KRAS	Amp_17q25.3	0.134	1
KRTAP5-10	PARM1	0.134	1
MPP7	TP53	0.134	1
PARM1	ZNF780B	0.134	1
POTEG	9q-Del	0.134	1
POTEG	Del_5q31.3	0.134	1
PPP6C	USH2A	0.134	1
PTEN	Amp_7p22.1	0.134	1
RB1	Del_16q23.1	0.134	1
THSD7B	TP53	0.134	1
TP63	Amp_7p22.1	0.134	1
TPTE	Del_12q23.3	0.134	1
6p-Amp	Del_10q23.31	0.134	1
11q-Del	Amp_13q31.3	0.134	1
6p-Del	Amp_1p12	0.134	1
Amp_11q13.3	Del_15q13.3	0.134	1
C10orf54	Del_3q13.31	0.135	1
CCNA1	Del_4p16.3	0.135	1
CYP3A4	EPHA6	0.135	1
DSG3	USP17L2	0.135	1
DSG3	Amp_13q31.3	0.135	1
KIT	MPP7	0.135	1
KRT73	Del_1p22.1	0.135	1
RIPK4	Del_4p16.3	0.135	1
TPTE	11p-Del	0.135	1
10q-Del	Amp_15q26.2	0.135	1
Amp_3p13	Amp_7q34	0.135	1
Amp_13q31.3	Del_2q37.3	0.135	1
Del_2q37.3	Del_15q13.3	0.135	1
CDC42BPA	KYNU	0.136	1
CTNNB1	EZH2	0.136	1
CTNNB1	KIT	0.136	1
CTNNB1	Del_6q26	0.136	1
GLI1	KYNU	0.136	1
POTEG	11p-Del	0.136	1
RIPK4	Del_10q21.1	0.136	1
20q-Amp	Amp_4q12	0.136	1
6p-Amp	7p-Amp	0.136	1
Amp_15q26.2	Del_3q13.31	0.136	1
Amp_15q26.2	Del_19p13.3	0.136	1
Amp_22q13.2	Del_8p23.3	0.136	1
C10orf28	CCK	0.137	1
MLL	7p-Amp	0.137	1
MPP7	MYO16	0.137	1
NRAS	Del_5q31.3	0.137	1
SLC38A4	Amp_17q25.3	0.137	1
STK19	Del_16q23.1	0.137	1
TPTE	17p-Del	0.137	1
TRERF1	Del_16q24.3	0.137	1
7p-Amp	Del_1p36.31	0.137	1
Amp_13q31.3	Del_10q23.31	0.137	1
CNTN5	FAM58A	0.138	1
CNTN5	KRAS	0.138	1
HRAS	HSD11B1	0.138	1
C10orf28	Del_13q34	0.139	1
CAMTA1	SLC38A4	0.139	1
CNTN5	Del_16q24.3	0.139	1
CPA3	Del_10q26.3	0.139	1
CTNNA3	DDX3X	0.139	1
CTNNA3	RAC1	0.139	1
NRAS	6p-Del	0.139	1
PPP6C	Amp_3p13	0.139	1
Amp_3p13	Amp_6q12	0.139	1
Amp_4q12	Del_10p15.3	0.139	1
Amp_12q15	Del_10p15.3	0.139	1
Del_16q24.3	Del_Xp21.1	0.139	1
ACSBG1	BTK	0.14	1
ACSBG1	CTNNA3	0.14	1
ACSBG1	MAN1A1	0.14	1
APCS	BTK	0.14	1
APCS	CTNNA3	0.14	1
APCS	IDH1	0.14	1
APCS	NUP214	0.14	1
BTK	CYP3A5	0.14	1
CTNNB1	TTN	0.14	1
CYP3A5	MAN1A1	0.14	1
CYP3A5	ZFX	0.14	1
EMG1	Del_5q31.3	0.14	1
HSD11B1	1q-Amp	0.14	1
IGF1R	MAN1A1	0.14	1
IGF1R	ZFX	0.14	1
IGF1R	Amp_3p13	0.14	1
IGF1R	Amp_12q15	0.14	1
OXA1L	Del_6q21	0.14	1
SYK	ZFX	0.14	1
SYK	Amp_12q15	0.14	1
Del_4q34.3	Del_16q23.1	0.14	1
APC	IDH1	0.141	1
ATP5F1	MYO16	0.141	1
ATP5F1	SLC38A4	0.141	1
CCK	EPHA7	0.141	1
CCK	SELP	0.141	1
CDKN2A	PTPN22	0.141	1
KRAS	MYO16	0.141	1
KRAS	SLC38A4	0.141	1
Amp_12q15	Del_5p15.31	0.141	1
ALPK2	CYP3A5	0.142	1
CBL	SLC9A11	0.142	1
CTNNB1	NF1	0.142	1
EMG1	USH2A	0.142	1
KRT73	THSD7B	0.142	1
KYNU	NF1	0.142	1
RIPK4	THSD7B	0.142	1
RQCD1	6p-Amp	0.142	1
XIRP2	17p-Del	0.142	1
APC	Del_4p16.3	0.143	1
C15orf23	SLC9A11	0.143	1
KRTAP5-10	RELN	0.143	1
NGF	Del_11q23.3	0.143	1
OR6C74	USP17L2	0.143	1
PTEN	Del_6q26	0.143	1
RELN	SLC27A5	0.143	1
RQCD1	Del_11q23.3	0.143	1
S100A8	TP63	0.143	1
S100A8	Del_16q24.3	0.143	1
9q-Del	Del_3q13.31	0.143	1
9q-Del	Del_19p13.3	0.143	1
Amp_1q21.3	Del_3q13.31	0.143	1
Amp_5p15.33	Del_10q26.3	0.143	1
Del_1p22.1	Del_5p15.31	0.143	1
Del_5q12.1	Del_14q23.3	0.143	1
Del_5q12.1	Del_16q12.1	0.143	1
C15orf23	Amp_17q25.3	0.144	1
CDKN2A	NF1	0.144	1
FLT1	GML	0.144	1
GUCY2F	MPP7	0.144	1
11q-Del	5q-Del	0.144	1
Amp_13q31.3	Del_8p23.3	0.144	1
Amp_13q31.3	Del_15q21.1	0.144	1
ATP5F1	TTN	0.145	1
CAMTA1	CDK4	0.145	1
CAMTA1	S100A8	0.145	1
CCNA1	EPHA7	0.145	1
CDC42BPA	MYO16	0.145	1
CDC42BPA	SELP	0.145	1
CYP3A4	Del_16q12.1	0.145	1
EPHA7	EZH2	0.145	1
FAM58A	TTN	0.145	1
GLI1	MYO16	0.145	1
KIT	SELP	0.145	1
KIT	SLC38A4	0.145	1
KRT73	MYO16	0.145	1
MYO16	RIPK4	0.145	1
NAP1L2	OXA1L	0.145	1
RIPK4	SELP	0.145	1
20p-Amp	Del_11q23.3	0.145	1
CDKN2A	NUP214	0.146	1
CPA3	KRTAP5-10	0.146	1
CYP3A4	KRTAP5-10	0.146	1
CYP3A4	ZNF780B	0.146	1
DDX3X	MSTN	0.146	1
EPHA4	17p-Del	0.146	1
KRTAP5-10	LGR6	0.146	1
LGR6	ZNF780B	0.146	1
MSTN	RAC1	0.146	1
NRAS	RPTN	0.146	1
PPP6C	ZNF780B	0.146	1
ZNF780B	17p-Del	0.146	1
17p-Del	6p-Del	0.146	1
6p-Del	Amp_5p15.33	0.146	1
Amp_7q34	Del_11q23.3	0.146	1
DSG3	9q-Del	0.147	1
EPHA6	KYNU	0.147	1
EPHA7	NRAS	0.147	1
FLT1	NRAS	0.147	1
IDH1	9p-Del	0.147	1
NRAS	SELP	0.147	1
6p-Amp	Amp_22q13.2	0.147	1
Amp_1q21.3	Del_10q21.1	0.147	1
BTK	HRAS	0.148	1
MLL	SELP	0.148	1
SLC38A4	17p-Del	0.148	1
Amp_12q14.1	Amp_20q13.33	0.148	1
CTNNB1	NAP1L2	0.149	1
DCLK3	17p-Del	0.149	1
FGFR2	20q-Amp	0.149	1
KRAS	Del_6q21	0.149	1
KYNU	NAP1L2	0.149	1
OR4S2	TP63	0.149	1
OR4S2	Del_16q24.3	0.149	1
POTEG	17p-Del	0.149	1
USP17L2	Del_12q23.3	0.149	1
USP9X	8q-Amp	0.149	1
Amp_3p13	Del_4q34.3	0.149	1
Amp_12q14.1	Del_10p15.3	0.149	1
CPA3	CYP3A4	0.15	1
CPA3	LGR6	0.15	1
CPA3	PPP6C	0.15	1
CYP3A4	PPP6C	0.15	1
CYP3A4	RAC1	0.15	1
DDX3X	Amp_6q12	0.15	1
DMC1	TTN	0.15	1
LGR6	PPP6C	0.15	1
LGR6	RAC1	0.15	1
NF1	11p-Del	0.15	1
ACSBG1	KCND2	0.151	1
CCNA1	USP9X	0.151	1
CYP3A5	DSG3	0.151	1
CYP3A5	11p-Del	0.151	1
GLI1	OR4S2	0.151	1
GLI1	USP9X	0.151	1
IDH1	Del_9p23	0.151	1
KIT	OR4S2	0.151	1
KRT73	OR4S2	0.151	1
MPP7	Del_6q26	0.151	1
Amp_12q15	Del_9p23	0.151	1
C10orf28	11q-Del	0.152	1
C7orf58	10p-Del	0.152	1
CPA3	KCND2	0.152	1
CYP3A4	KCND2	0.152	1
DSG3	Amp_6p24.3	0.152	1
EMG1	11q-Del	0.152	1
KCND2	PPP6C	0.152	1
RELN	Del_16q12.1	0.152	1
6q-Del	Del_16p13.3	0.152	1
Del_11q23.3	Del_15q21.1	0.152	1
BTK	NBPF1	0.153	1
EPHA6	11q-Del	0.153	1
FGFR2	NUP214	0.153	1
KIT	Del_6q26	0.153	1
MAN1A1	POTEG	0.153	1
MPP7	16q-Del	0.153	1
NBPF1	NUP214	0.153	1
NBPF1	Amp_12q15	0.153	1
USH2A	ZFX	0.153	1
20p-Amp	Amp_4q12	0.153	1
7q-Amp	Del_1p36.31	0.153	1
18p-Del	Amp_4q12	0.153	1
6q-Del	Del_13q34	0.153	1
ARID2	FLT1	0.154	1
CPA3	Del_10q23.31	0.154	1
MPP7	Amp_6p24.3	0.154	1
NRAS	TPTE	0.154	1
SELP	SLC38A4	0.154	1
7p-Amp	6p-Del	0.154	1
Amp_6p24.3	Amp_17q25.3	0.154	1
Amp_20q13.33	Del_15q13.3	0.154	1
Del_4q34.3	Del_5q12.1	0.154	1
Del_6q26	Del_15q13.3	0.154	1
APC	OXA1L	0.155	1
APC	PTPN11	0.155	1
C10orf54	PDGFRA	0.155	1
C10orf54	Del_5p15.31	0.155	1
CDK4	8p-Amp	0.155	1
CDK4	Del_5p15.31	0.155	1
CDKN2A	MSTN	0.155	1
EPHA7	11p-Del	0.155	1
OXA1L	TRERF1	0.155	1
PDGFRA	S100A8	0.155	1
PDGFRA	Del_16q12.1	0.155	1
PPP6C	TTN	0.155	1
PTPN22	S100A8	0.155	1
SLC9A11	Del_1p36.31	0.155	1
Amp_1p12	Del_13q34	0.155	1
Del_3q13.31	Del_5p15.31	0.155	1
ACSBG1	KYNU	0.156	1
APCS	CNTN5	0.156	1
APCS	KYNU	0.156	1
ATP5F1	OXA1L	0.156	1
ATP5F1	PTPN11	0.156	1
C15orf23	MYO16	0.156	1
CAMTA1	NAP1L2	0.156	1
CYP3A5	KYNU	0.156	1
FAM58A	OXA1L	0.156	1
IGF1R	KYNU	0.156	1
KRAS	OXA1L	0.156	1
KRTAP5-10	7p-Amp	0.156	1
KYNU	SYK	0.156	1
MYO16	13q-Amp	0.156	1
OR4S2	Del_3q13.31	0.156	1
PARM1	SELP	0.156	1
SLC27A5	TPTE	0.156	1
ANO4	MLL	0.157	1
ANO4	NGF	0.157	1
ANO4	OR6C74	0.157	1
ARID2	USP9X	0.157	1
C10orf28	CTNNA3	0.157	1
C7orf58	OR4S2	0.157	1
CCNA1	EPHA6	0.157	1
CNTN5	Del_16q23.1	0.157	1
DMC1	13q-Amp	0.157	1
EPHA6	KIT	0.157	1
EPHA6	KRT73	0.157	1
EPHA6	RIPK4	0.157	1
GML	GUCY2F	0.157	1
IDH1	Del_16q12.1	0.157	1
TP63	Amp_13q31.3	0.157	1
13q-Amp	10p-Del	0.157	1
Amp_4q12	Del_16q12.1	0.157	1
Amp_12q15	Del_14q23.3	0.157	1
APC	SELP	0.158	1
C10orf28	1q-Amp	0.158	1
CAMTA1	TPTE	0.158	1
EPHA4	MSTN	0.158	1
FRMPD4	Amp_6p24.3	0.158	1
MYO16	PDGFRA	0.158	1
MYO16	PTPN22	0.158	1
MYO16	TRERF1	0.158	1
PTEN	7p-Amp	0.158	1
1q-Amp	11p-Del	0.158	1
20q-Amp	11q-Del	0.158	1
10p-Del	Amp_13q31.3	0.158	1
10q-Del	Amp_1q21.3	0.158	1
11p-Del	Amp_12q14.1	0.158	1
Amp_12q14.1	Del_10q26.3	0.158	1
C10orf28	EMG1	0.159	1
C7orf58	Del_16q23.1	0.159	1
HSD11B1	MAN1A1	0.159	1
HSD11B1	NUP214	0.159	1
HSD11B1	ZFX	0.159	1
MAN1A1	7q-Amp	0.159	1
NUP214	STK19	0.159	1
STK19	Amp_4q12	0.159	1
STK19	Amp_12q15	0.159	1
8q-Amp	Del_14q23.3	0.159	1
Amp_3p13	Amp_11q13.3	0.159	1
C7orf58	7p-Amp	0.16	1
IDH1	THSD7B	0.16	1
RELN	16q-Del	0.16	1
ALPK2	16q-Del	0.161	1
C7orf58	9p-Del	0.161	1
DCLK3	Del_4p16.3	0.161	1
FRMPD4	Del_15q21.1	0.161	1
MPP7	POTEG	0.161	1
NF1	Del_16q12.1	0.161	1
POTEG	TP63	0.161	1
POTEG	8q-Amp	0.161	1
TP63	Del_2q37.3	0.161	1
20p-Amp	Del_1p22.1	0.161	1
8q-Amp	14q-Del	0.161	1
Del_1p36.31	Del_19p13.3	0.161	1
Del_1p22.1	Del_2q37.3	0.161	1
Del_2q37.3	Del_16q24.3	0.161	1
APCS	Del_4p16.3	0.162	1
CPA3	9p-Del	0.162	1
DSG3	Amp_7q34	0.162	1
IGF1R	MPP7	0.162	1
MPP7	Del_16q24.3	0.162	1
NUP214	6q-Del	0.162	1
RELN	Del_16p13.3	0.162	1
TP63	Del_4p16.3	0.162	1
22q-Amp	Del_10q23.31	0.162	1
7q-Amp	11q-Del	0.162	1
7q-Amp	Del_1p22.1	0.162	1
8q-Amp	Amp_17q25.3	0.162	1
8q-Amp	Del_4p16.3	0.162	1
6q-Del	Amp_4q12	0.162	1
6q-Del	Amp_12q15	0.162	1
ATP5F1	KEL	0.163	1
CDKN2A	20p-Amp	0.163	1
CTNNB1	8p-Amp	0.163	1
FAM58A	KEL	0.163	1
FLT1	GNAQ	0.163	1
GML	Amp_1q44	0.163	1
GNAQ	Del_4q34.3	0.163	1
KRAS	Del_4q34.3	0.163	1
KYNU	PDGFRA	0.163	1
KYNU	TRERF1	0.163	1
MLL	17p-Del	0.163	1
POTEG	Del_9p21.3	0.163	1
PTPN22	Amp_6p24.3	0.163	1
TP63	Del_10q23.31	0.163	1
8p-Amp	Amp_15q26.2	0.163	1
Amp_1q44	Del_10q23.31	0.163	1
Del_2q37.3	Del_9p21.3	0.163	1
C10orf54	EPHA6	0.164	1
CDKN2A	SELP	0.164	1
DSG3	6p-Amp	0.164	1
EPHA6	PTPN11	0.164	1
MLL	Amp_15q26.2	0.164	1
PTPN22	RELN	0.164	1
SLC9A11	TP53	0.164	1
20q-Amp	Amp_15q26.2	0.164	1
Amp_1q21.3	Del_13q34	0.164	1
Amp_5p15.33	Amp_15q26.2	0.164	1
ALPK2	NGF	0.165	1
ALPK2	OR6C74	0.165	1
ANO4	C15orf23	0.165	1
ANO4	PARM1	0.165	1
C10orf54	DCLK3	0.165	1
C10orf54	FGFR2	0.165	1
C10orf54	NBPF1	0.165	1
CDC42BPA	5q-Del	0.165	1
CDKN2A	7q-Amp	0.165	1
CYP3A5	9p-Del	0.165	1
GML	11q-Del	0.165	1
GNAQ	Amp_7p22.1	0.165	1
HRAS	6q-Del	0.165	1
KRT73	5q-Del	0.165	1
NAP1L2	6q-Del	0.165	1
OR6C74	Amp_22q13.2	0.165	1
POTEG	S100A8	0.165	1
PTEN	6q-Del	0.165	1
PTPN11	Del_2q37.3	0.165	1
S100A8	Del_2q37.3	0.165	1
Amp_3p13	Del_5q12.1	0.165	1
CPA3	Amp_17q25.3	0.166	1
CTNNA3	STK19	0.166	1
EPHA4	Del_6q26	0.166	1
FRMPD4	THSD7B	0.166	1
HRAS	USP9X	0.166	1
MPP7	RAC1	0.166	1
13q-Amp	11q-Del	0.166	1
Amp_6q12	Amp_17q25.3	0.166	1
BTK	Del_13q34	0.167	1
DDX3X	EPHA4	0.167	1
EPHA4	PPP6C	0.167	1
EPHA4	RAC1	0.167	1
IDH1	Del_12q23.3	0.167	1
SELP	Del_11q23.3	0.167	1
SLC9A11	Del_11q23.3	0.167	1
7q-Amp	Del_11q23.3	0.167	1
10q-Del	Amp_6p24.3	0.167	1
Amp_4q12	Del_12q23.3	0.167	1
Amp_4q12	Del_16q23.1	0.167	1
Amp_6q12	Amp_11q13.3	0.167	1
APCS	Del_Xp21.1	0.168	1
CNTN5	Del_13q34	0.168	1
COL3A1	ZFX	0.168	1
SYK	Del_Xp21.1	0.168	1
TRERF1	Del_16q23.1	0.168	1
6p-Amp	Del_9p21.3	0.168	1
ACSBG1	TP63	0.169	1
APCS	Del_16q24.3	0.169	1
DDX3X	SLC9A11	0.169	1
IGF1R	8q-Amp	0.169	1
RAC1	SLC9A11	0.169	1
SYK	TP63	0.169	1
TTN	9q-Del	0.169	1
1q-Amp	18p-Del	0.169	1
EMG1	RELN	0.17	1
IDH1	9q-Del	0.17	1
OXA1L	Del_6q26	0.17	1
PARM1	16q-Del	0.17	1
USP17L2	17p-Del	0.17	1
7p-Amp	6q-Del	0.17	1
17p-Del	Amp_13q31.3	0.17	1
6q-Del	Amp_17q25.3	0.17	1
9q-Del	Amp_12q15	0.17	1
Amp_1q21.3	Amp_4q12	0.17	1
Amp_5p15.33	Amp_13q31.3	0.17	1
Amp_7q34	Amp_12q14.1	0.17	1
Amp_7q34	Del_16p13.3	0.17	1
ARID2	ATP5F1	0.171	1
ARID2	FAM58A	0.171	1
ARID2	GNAQ	0.171	1
ATP5F1	C7orf58	0.171	1
CAMTA1	OR4S2	0.171	1
CCK	Del_5q12.1	0.171	1
CPA3	DMC1	0.171	1
CYP3A4	GML	0.171	1
DMC1	PPP6C	0.171	1
GML	LGR6	0.171	1
GML	Amp_6q12	0.171	1
KRTAP5-10	USP17L2	0.171	1
NAP1L2	Del_11q23.3	0.171	1
PTEN	9p-Del	0.171	1
TP53	Del_10p15.3	0.171	1
USH2A	ZNF780B	0.171	1
USP17L2	ZNF780B	0.171	1
Amp_12q14.1	Del_1p36.31	0.171	1
Amp_12q14.1	Del_4q34.3	0.171	1
Del_1p36.31	Del_8p23.3	0.171	1
Del_1p36.31	Del_16p13.3	0.171	1
APCS	OR4S2	0.172	1
APCS	USP9X	0.172	1
ARID2	C7orf58	0.172	1
CYP3A5	OR4S2	0.172	1
CYP3A5	USP9X	0.172	1
GML	Amp_1p12	0.172	1
GML	Del_15q13.3	0.172	1
OR4S2	SYK	0.172	1
RB1	Amp_8q24.21	0.172	1
RQCD1	Amp_8q24.21	0.172	1
20p-Amp	Del_3q13.31	0.172	1
20p-Amp	Del_19p13.3	0.172	1
18p-Del	Del_3q13.31	0.172	1
Del_2q37.3	Del_3q13.31	0.172	1
NAP1L2	PDGFRA	0.173	1
NGF	TP53	0.173	1
OR6C74	TP53	0.173	1
POTEG	Del_6q21	0.173	1
PTEN	8p-Amp	0.173	1
TP63	Del_10q21.1	0.173	1
TRERF1	16q-Del	0.173	1
22q-Amp	8p-Amp	0.173	1
Amp_6p24.3	Del_9p23	0.173	1
Amp_20q13.33	Del_3q13.31	0.173	1
Amp_20q13.33	Del_19p13.3	0.173	1
ALPK2	MLL	0.174	1
APCS	MYO16	0.174	1
ATP5F1	OR6C74	0.174	1
C15orf23	NRAS	0.174	1
CBL	KRAS	0.174	1
CYP3A5	EPHA7	0.174	1
EMG1	Del_4p16.3	0.174	1
EPHA7	IGF1R	0.174	1
GNAQ	RQCD1	0.174	1
MYO16	SYK	0.174	1
TTN	ZFX	0.174	1
Amp_1p12	Del_9p21.3	0.174	1
Amp_12q14.1	Del_10q23.31	0.174	1
C10orf54	Del_13q34	0.175	1
MPP7	Del_16q23.1	0.175	1
RIPK4	Del_11q23.3	0.175	1
14q-Del	Del_3q13.31	0.175	1
Del_5q12.1	Del_19p13.3	0.175	1
Del_6q26	Del_13q34	0.175	1
ALPK2	GUCY2F	0.176	1
ANO4	7q-Amp	0.176	1
ARID2	7q-Amp	0.176	1
CCNA1	FLT1	0.176	1
CCNA1	Del_4q34.3	0.176	1
CDKN2A	KYNU	0.176	1
CTNNB1	STK19	0.176	1
EZH2	FLT1	0.176	1
EZH2	KEL	0.176	1
GNAQ	Amp_8q24.21	0.176	1
HSD11B1	KYNU	0.176	1
KYNU	STK19	0.176	1
MAP2K1	STK19	0.176	1
7p-Amp	Del_11q23.3	0.176	1
CAMTA1	RQCD1	0.177	1
CBL	NAP1L2	0.177	1
CTNNB1	NBPF1	0.177	1
KRAS	Del_6q26	0.177	1
KYNU	NBPF1	0.177	1
NGF	PTEN	0.177	1
TPTE	Del_16q24.3	0.177	1
20p-Amp	Amp_15q26.2	0.177	1
BTK	MAN1A1	0.178	1
BTK	NUP214	0.178	1
BTK	SLC9A11	0.178	1
BTK	6p-Amp	0.178	1
C10orf28	XIRP2	0.178	1
CNTN5	ZNF780B	0.178	1
EMG1	XIRP2	0.178	1
FGFR2	MYO16	0.178	1
IDH1	6p-Amp	0.178	1
MSTN	THSD7B	0.178	1
MYO16	Del_2q37.3	0.178	1
NF1	Del_16q23.1	0.178	1
NRAS	14q-Del	0.178	1
NUP214	Amp_12q15	0.178	1
18p-Del	Del_16q12.1	0.178	1
6q-Del	Amp_13q31.3	0.178	1
ATP5F1	Del_8p23.3	0.179	1
CNTN5	17p-Del	0.179	1
EZH2	Amp_1q21.3	0.179	1
GNAQ	NF1	0.179	1
GNAQ	Del_15q21.1	0.179	1
KRAS	NF1	0.179	1
KYNU	Amp_7p22.1	0.179	1
OXA1L	10p-Del	0.179	1
1q-Amp	9q-Del	0.179	1
CDK4	EMG1	0.18	1
CYP3A4	Del_6q21	0.18	1
EPHA6	USP9X	0.18	1
EPHA7	PPP6C	0.18	1
EPHA7	Del_16q12.1	0.18	1
IDH1	MYO3B	0.18	1
KCND2	NRAS	0.18	1
MYO3B	NUP214	0.18	1
RAC1	SLC38A4	0.18	1
TP63	Del_16p13.3	0.18	1
8q-Amp	Del_16p13.3	0.18	1
Amp_1p12	Del_14q23.3	0.18	1
C15orf23	EZH2	0.181	1
CCNA1	GUCY2F	0.181	1
CDC42BPA	GUCY2F	0.181	1
EPHA6	KCND2	0.181	1
EZH2	13q-Amp	0.181	1
FAM58A	6q-Del	0.181	1
GUCY2F	KIT	0.181	1
GUCY2F	KRT73	0.181	1
KRTAP5-10	SLC9A11	0.181	1
KRTAP5-10	6p-Amp	0.181	1
MPP7	Del_13q34	0.181	1
PARM1	RIPK4	0.181	1
Amp_3p13	Del_15q21.1	0.181	1
CCNA1	XIRP2	0.182	1
CNTN5	DSG3	0.182	1
DMC1	20q-Amp	0.182	1
KIT	XIRP2	0.182	1
TPTE	Del_16p13.3	0.182	1
9q-Del	Amp_17q25.3	0.182	1
C10orf28	SELP	0.183	1
C10orf28	SLC38A4	0.183	1
NAP1L2	Del_1p36.31	0.183	1
PTEN	Del_4q34.3	0.183	1
PTPN22	SLC9A11	0.183	1
PTPN22	6p-Amp	0.183	1
C7orf58	Del_16p13.3	0.184	1
CDKN2A	USP17L2	0.184	1
13q-Amp	Del_9p21.3	0.184	1
14q-Del	Amp_12q14.1	0.184	1
14q-Del	Del_16p13.3	0.184	1
Amp_5p15.33	Amp_8q24.21	0.184	1
APCS	16q-Del	0.185	1
C10orf54	MYO3B	0.185	1
CYP3A5	16q-Del	0.185	1
EPHA4	GML	0.185	1
KEL	6q-Del	0.185	1
MYO16	Amp_6p24.3	0.185	1
MYO3B	PTPN11	0.185	1
MYO3B	S100A8	0.185	1
RAC1	USP17L2	0.185	1
8p-Amp	Del_10q26.3	0.185	1
6q-Del	Del_1p36.31	0.185	1
9q-Del	Del_15q13.3	0.185	1
Del_3q13.31	Del_9p21.3	0.185	1
DSG3	STK19	0.186	1
EPHA4	6p-Del	0.186	1
EPHA6	Del_1p36.31	0.186	1
GNAQ	Del_15q13.3	0.186	1
HSD11B1	TP53	0.186	1
NGF	Amp_1q21.3	0.186	1
SELP	Del_10q23.31	0.186	1
8q-Amp	Del_12q23.3	0.186	1
APC	OR4S2	0.187	1
APC	USP9X	0.187	1
ARID2	CDC42BPA	0.187	1
ARID2	KRT73	0.187	1
ARID2	RIPK4	0.187	1
CCK	Amp_1q21.3	0.187	1
CCNA1	Amp_7q34	0.187	1
CDC42BPA	Del_5q12.1	0.187	1
CTNNB1	RPTN	0.187	1
GLI1	Amp_7q34	0.187	1
KRAS	Amp_1q21.3	0.187	1
OR4S2	PDGFRA	0.187	1
OR4S2	PTPN22	0.187	1
PDGFRA	USP9X	0.187	1
TRERF1	USP9X	0.187	1
USP9X	8p-Amp	0.187	1
APC	RQCD1	0.188	1
BRAF	Del_5q31.3	0.188	1
C15orf23	DSG3	0.188	1
CBL	PDGFRA	0.188	1
CDKN2A	EPHA6	0.188	1
NGF	PTPN22	0.188	1
OR6C74	PDGFRA	0.188	1
OR6C74	TRERF1	0.188	1
PTPN22	RQCD1	0.188	1
TTN	13q-Amp	0.188	1
9p-Del	Amp_1q21.3	0.188	1
BRAF	CCNA1	0.189	1
BRAF	EZH2	0.189	1
CTNNA3	TPTE	0.189	1
CYP3A5	Amp_12q14.1	0.189	1
CYP3A5	Del_16p13.3	0.189	1
IGF1R	Amp_12q14.1	0.189	1
NGF	TP63	0.189	1
OR6C74	TP63	0.189	1
PTPN22	TPTE	0.189	1
RB1	TP63	0.189	1
RB1	8q-Amp	0.189	1
RB1	Del_16q24.3	0.189	1
7p-Amp	8p-Amp	0.189	1
7p-Amp	9q-Del	0.189	1
Del_13q34	Del_19p13.3	0.189	1
CYP3A5	USH2A	0.19	1
IGF1R	USH2A	0.19	1
RIPK4	10q-Del	0.19	1
10p-Del	Amp_17q25.3	0.19	1
ATP5F1	KRTAP5-10	0.191	1
C10orf54	NRAS	0.191	1
CCK	MSTN	0.191	1
GNAQ	ZNF780B	0.191	1
KRAS	MSTN	0.191	1
KRAS	SLC27A5	0.191	1
STK19	Del_4p16.3	0.191	1
CTNNB1	Del_12q23.3	0.192	1
IDH1	Del_Xp21.1	0.192	1
MAP2K1	Del_13q34	0.192	1
NAP1L2	Del_2q37.3	0.192	1
NBPF1	22q-Amp	0.192	1
PARM1	6q-Del	0.192	1
PDGFRA	TRERF1	0.192	1
PTEN	20p-Amp	0.192	1
PTEN	18p-Del	0.192	1
TP53	20q-Amp	0.192	1
TRERF1	8p-Amp	0.192	1
TTN	ZNF780B	0.192	1
20p-Amp	22q-Amp	0.192	1
20q-Amp	11p-Del	0.192	1
CDK4	Del_5q31.3	0.193	1
CDKN2A	Del_9p23	0.193	1
EMG1	16q-Del	0.193	1
EPHA6	NRAS	0.193	1
GNAQ	Amp_7q34	0.193	1
Amp_1q21.3	Del_5q31.3	0.193	1
Amp_1q21.3	Del_9p23	0.193	1
ATP5F1	MLL	0.194	1
CTNNA3	IDH1	0.194	1
CTNNA3	MAN1A1	0.194	1
HRAS	LGR6	0.194	1
HRAS	Amp_6p24.3	0.194	1
HRAS	Amp_6q12	0.194	1
HSD11B1	USP9X	0.194	1
KRAS	20q-Amp	0.194	1
KRAS	Amp_5p15.33	0.194	1
OR4S2	STK19	0.194	1
OR4S2	17p-Del	0.194	1
PTEN	Del_16p13.3	0.194	1
STK19	USP9X	0.194	1
USP9X	Amp_5p15.33	0.194	1
CDKN2A	Amp_20q13.33	0.195	1
DDX3X	16q-Del	0.195	1
LGR6	XIRP2	0.195	1
PPP6C	16q-Del	0.195	1
XIRP2	Del_12q23.3	0.195	1
16q-Del	18p-Del	0.195	1
6q-Del	Amp_20q13.33	0.195	1
ARID2	Amp_1q44	0.196	1
C10orf54	CTNNA3	0.196	1
CTNNA3	NUDT11	0.196	1
CTNNA3	OXA1L	0.196	1
CTNNA3	S100A8	0.196	1
CTNNB1	7q-Amp	0.196	1
KRTAP5-10	Del_19p13.3	0.196	1
7q-Amp	Amp_15q26.2	0.196	1
Amp_7q34	Del_1p22.1	0.196	1
BTK	KYNU	0.197	1
BTK	Amp_15q26.2	0.197	1
CCNA1	CYP3A4	0.197	1
CCNA1	DDX3X	0.197	1
CCNA1	LGR6	0.197	1
CDC42BPA	CPA3	0.197	1
CDC42BPA	PPP6C	0.197	1
CDC42BPA	RAC1	0.197	1
CPA3	KIT	0.197	1
CTNNB1	IDH1	0.197	1
CTNNB1	NUP214	0.197	1
CYP3A4	EZH2	0.197	1
CYP3A4	GLI1	0.197	1
CYP3A4	KIT	0.197	1
CYP3A4	RIPK4	0.197	1
CYP3A5	5q-Del	0.197	1
DDX3X	EZH2	0.197	1
DSG3	Del_9p21.3	0.197	1
EZH2	PPP6C	0.197	1
EZH2	RAC1	0.197	1
FRMPD4	Amp_1q21.3	0.197	1
GLI1	Amp_6q12	0.197	1
IDH1	Amp_15q26.2	0.197	1
KIT	PPP6C	0.197	1
KRT73	LGR6	0.197	1
KRT73	PPP6C	0.197	1
KRT73	RAC1	0.197	1
KYNU	Amp_12q15	0.197	1
MAP2K1	NUP214	0.197	1
MAP2K1	ZFX	0.197	1
MAP2K1	Amp_4q12	0.197	1
NRAS	8q-Amp	0.197	1
RAC1	RIPK4	0.197	1
SYK	5q-Del	0.197	1
SYK	Amp_7p22.1	0.197	1
Amp_1q21.3	Del_16q24.3	0.197	1
ACSBG1	THSD7B	0.198	1
C15orf23	FLT1	0.198	1
C15orf23	RELN	0.198	1
CYP3A5	EPHA6	0.198	1
EZH2	NF1	0.198	1
GLI1	NF1	0.198	1
PTEN	Del_5q31.3	0.198	1
SELP	9p-Del	0.198	1
SYK	THSD7B	0.198	1
13q-Amp	Del_1p36.31	0.198	1
Amp_8q24.21	Amp_15q26.2	0.198	1
Amp_13q31.3	Del_10p15.3	0.198	1
C7orf58	PTEN	0.199	1
DMC1	Amp_13q31.3	0.199	1
NBPF1	THSD7B	0.199	1
USH2A	Amp_1p12	0.199	1
Amp_1p12	Del_10q21.1	0.199	1
C10orf28	NGF	0.2	1
C10orf28	RQCD1	0.2	1
CNTN5	HSD11B1	0.2	1
COL3A1	PPP6C	0.2	1
COL3A1	RAC1	0.2	1
CPA3	11q-Del	0.2	1
DCLK3	RB1	0.2	1
NBPF1	OR6C74	0.2	1
NBPF1	RQCD1	0.2	1
NGF	POTEG	0.2	1
OR6C74	Del_2q37.3	0.2	1
6p-Amp	Del_16q24.3	0.2	1
Amp_7q34	Del_15q13.3	0.2	1
FRMPD4	Amp_17q25.3	0.201	1
OXA1L	7q-Amp	0.201	1
1q-Amp	Del_10q26.3	0.201	1
ATP5F1	CDKN2A	0.202	1
CCK	CDKN2A	0.202	1
EPHA6	POTEG	0.202	1
GLI1	7q-Amp	0.202	1
NBPF1	OR4S2	0.202	1
OR4S2	18p-Del	0.202	1
POTEG	USP9X	0.202	1
RIPK4	7q-Amp	0.202	1
USP9X	20p-Amp	0.202	1
17p-Del	Amp_6p24.3	0.202	1
Amp_5p15.33	Amp_6p24.3	0.202	1
C10orf54	OXA1L	0.203	1
EPHA4	HRAS	0.203	1
KYNU	Del_10q21.1	0.203	1
PTPN11	S100A8	0.203	1
ANO4	TP53	0.204	1
CTNNB1	9p-Del	0.204	1
EPHA7	HSD11B1	0.204	1
HSD11B1	MYO16	0.204	1
OXA1L	Del_10p15.3	0.204	1
Amp_20q13.33	Del_10q26.3	0.204	1
Del_10p15.3	Del_13q34	0.204	1
ARID2	CNTN5	0.205	1
C7orf58	Del_10p15.3	0.205	1
6p-Del	Amp_13q31.3	0.205	1
ACSBG1	PARM1	0.206	1
APCS	PARM1	0.206	1
BRAF	HSD11B1	0.206	1
C15orf23	SYK	0.206	1
CDKN2A	CNTN5	0.206	1
CYP3A5	GUCY2F	0.206	1
CYP3A5	PARM1	0.206	1
KCND2	PTPN11	0.206	1
RELN	17p-Del	0.206	1
Amp_1p12	Del_19p13.3	0.206	1
Amp_6p24.3	Del_3q13.31	0.206	1
Del_1p36.31	Del_5p15.31	0.206	1
Del_3q13.31	Del_15q13.3	0.206	1
Del_4q34.3	Del_5p15.31	0.206	1
Del_15q13.3	Del_19p13.3	0.206	1
ALPK2	DDX3X	0.207	1
CDKN2A	USP9X	0.207	1
COL3A1	CTNNB1	0.207	1
KYNU	MYO3B	0.207	1
STK19	Del_16q24.3	0.207	1
Amp_12q15	Del_6q26	0.207	1
CDK4	11q-Del	0.208	1
COL3A1	PTPN11	0.208	1
S100A8	11q-Del	0.208	1
8p-Amp	Del_9p21.3	0.208	1
ALPK2	KRTAP5-10	0.209	1
ALPK2	SLC27A5	0.209	1
CCK	GML	0.209	1
EZH2	Amp_1p12	0.209	1
FAM58A	GML	0.209	1
FLT1	MLL	0.209	1
FLT1	MYO16	0.209	1
FLT1	SLC38A4	0.209	1
GLI1	Amp_1p12	0.209	1
GLI1	Del_15q13.3	0.209	1
GML	GNAQ	0.209	1
GML	KRAS	0.209	1
KEL	17p-Del	0.209	1
KIT	Amp_1p12	0.209	1
MSTN	Amp_22q13.2	0.209	1
NBPF1	6p-Amp	0.209	1
RIPK4	Del_15q13.3	0.209	1
SLC9A11	Del_2q37.3	0.209	1
XIRP2	ZFX	0.209	1
20p-Amp	6p-Amp	0.209	1
20q-Amp	Del_4q34.3	0.209	1
17p-Del	Del_4q34.3	0.209	1
Amp_5p15.33	Del_1p36.31	0.209	1
ACSBG1	Del_4q34.3	0.21	1
APCS	FLT1	0.21	1
CYP3A5	FLT1	0.21	1
CYP3A5	Del_4q34.3	0.21	1
FLT1	IGF1R	0.21	1
KEL	SYK	0.21	1
KRTAP5-10	PTEN	0.21	1
MSTN	22q-Amp	0.21	1
NAP1L2	ZNF780B	0.21	1
ZNF780B	22q-Amp	0.21	1
8q-Amp	16q-Del	0.21	1
14q-Del	Amp_1p12	0.21	1
C10orf28	FLT1	0.211	1
EMG1	Del_4q34.3	0.211	1
HRAS	USP17L2	0.211	1
PDGFRA	Amp_12q14.1	0.211	1
PTEN	7q-Amp	0.211	1
PTEN	Del_12q23.3	0.211	1
RIPK4	11q-Del	0.211	1
16q-Del	5q-Del	0.211	1
Amp_11q13.3	Del_9p21.3	0.211	1
Del_5p15.31	Del_16p13.3	0.211	1
ARID2	C15orf23	0.212	1
C15orf23	C7orf58	0.212	1
C15orf23	Del_5q12.1	0.212	1
C7orf58	GUCY2F	0.212	1
C7orf58	13q-Amp	0.212	1
EPHA4	KIT	0.212	1
EPHA4	KRT73	0.212	1
EPHA6	Del_16q12.1	0.212	1
NBPF1	PTPN22	0.212	1
NGF	Del_12q23.3	0.212	1
OR6C74	Del_12q23.3	0.212	1
PDGFRA	Del_2q37.3	0.212	1
POTEG	PTPN22	0.212	1
PPP6C	1q-Amp	0.212	1
RB1	Del_12q23.3	0.212	1
RQCD1	Del_13q34	0.212	1
TRERF1	9q-Del	0.212	1
9p-Del	Amp_6p24.3	0.212	1
Amp_4q12	Amp_22q13.2	0.212	1
Amp_12q15	Amp_22q13.2	0.212	1
C15orf23	Amp_7q34	0.213	1
CDKN2A	Amp_8q24.21	0.213	1
NBPF1	5q-Del	0.213	1
13q-Amp	Del_10q21.1	0.213	1
13q-Amp	Del_16q24.3	0.213	1
7p-Amp	Del_15q13.3	0.213	1
Amp_12q14.1	Del_9p23	0.213	1
ANO4	9p-Del	0.214	1
CDKN2A	DSG3	0.214	1
PDGFRA	Del_11q23.3	0.214	1
9p-Del	Amp_11q13.3	0.214	1
Amp_3p13	Del_5q31.3	0.214	1
CAMTA1	TP53	0.215	1
DSG3	22q-Amp	0.215	1
EPHA6	RB1	0.215	1
MLL	9q-Del	0.215	1
NAP1L2	TP53	0.215	1
SELP	Amp_1q21.3	0.215	1
TP53	22q-Amp	0.215	1
8q-Amp	Del_19p13.3	0.215	1
17p-Del	Amp_1q21.3	0.215	1
Amp_7q34	Del_16q24.3	0.215	1
Del_3q13.31	Del_16q24.3	0.215	1
MPP7	NRAS	0.216	1
NRAS	Amp_17q25.3	0.216	1
PTEN	Del_15q21.1	0.216	1
7p-Amp	5q-Del	0.216	1
17p-Del	Amp_3p13	0.216	1
Amp_7q34	Del_16q23.1	0.216	1
BTK	OR4S2	0.217	1
BTK	USP9X	0.217	1
CCK	Amp_1q44	0.217	1
CDK4	Del_4p16.3	0.217	1
CDKN2A	9p-Del	0.217	1
KRAS	Amp_1q44	0.217	1
MAN1A1	7p-Amp	0.217	1
NUDT11	Amp_17q25.3	0.217	1
S100A8	Amp_17q25.3	0.217	1
USP9X	Amp_12q15	0.217	1
7p-Amp	Amp_4q12	0.217	1
C10orf28	Del_10q26.3	0.218	1
COL3A1	Amp_20q13.33	0.218	1
8p-Amp	9p-Del	0.218	1
9p-Del	Amp_7q34	0.218	1
C7orf58	Del_10q26.3	0.219	1
DSG3	SLC27A5	0.219	1
DSG3	ZNF780B	0.219	1
KRTAP5-10	TP53	0.219	1
KRTAP5-10	XIRP2	0.219	1
KYNU	Del_9p23	0.219	1
NRAS	USP9X	0.219	1
SLC27A5	TP53	0.219	1
ZNF780B	11p-Del	0.219	1
7q-Amp	9q-Del	0.219	1
Amp_15q26.2	Del_9p23	0.219	1
BRAF	10p-Del	0.22	1
C10orf28	MSTN	0.22	1
C10orf28	Del_5q12.1	0.22	1
KIT	Amp_1q44	0.22	1
NRAS	PDGFRA	0.22	1
NRAS	8p-Amp	0.22	1
16q-Del	Amp_6p24.3	0.22	1
Amp_12q14.1	Del_11q23.3	0.22	1
Amp_13q31.3	Del_10q21.1	0.22	1
Del_11q23.3	Del_16p13.3	0.22	1
BRAF	CTNNB1	0.221	1
BRAF	MAP2K1	0.221	1
C15orf23	7p-Amp	0.221	1
CDC42BPA	MLL	0.221	1
CPA3	11p-Del	0.221	1
CYP3A4	TP53	0.221	1
EZH2	MLL	0.221	1
EZH2	1q-Amp	0.221	1
EZH2	17p-Del	0.221	1
FGFR2	TPTE	0.221	1
FRMPD4	MYO16	0.221	1
GLI1	MLL	0.221	1
GLI1	20q-Amp	0.221	1
KIT	1q-Amp	0.221	1
KRT73	17p-Del	0.221	1
RAC1	TP53	0.221	1
RIPK4	17p-Del	0.221	1
TPTE	13q-Amp	0.221	1
ACSBG1	ARID2	0.222	1
ACSBG1	C7orf58	0.222	1
BTK	MPP7	0.222	1
C7orf58	CYP3A5	0.222	1
CBL	Del_6q21	0.222	1
CDKN2A	Del_14q23.3	0.222	1
CTNNB1	Amp_3p13	0.222	1
CYP3A5	Del_5q12.1	0.222	1
MAN1A1	Amp_17q25.3	0.222	1
MLL	Del_19p13.3	0.222	1
NGF	Amp_1q44	0.222	1
SELP	Del_9p21.3	0.222	1
20q-Amp	Del_3q13.31	0.222	1
Amp_4q12	Amp_17q25.3	0.222	1
Amp_4q12	Del_1p22.1	0.222	1
ACSBG1	CYP3A4	0.223	1
ACSBG1	LGR6	0.223	1
ACSBG1	PPP6C	0.223	1
APC	SLC27A5	0.223	1
APC	ZNF780B	0.223	1
APCS	LGR6	0.223	1
APCS	PPP6C	0.223	1
CPA3	IGF1R	0.223	1
CPA3	SYK	0.223	1
CYP3A4	IGF1R	0.223	1
CYP3A5	RAC1	0.223	1
DDX3X	IGF1R	0.223	1
DDX3X	SYK	0.223	1
IGF1R	LGR6	0.223	1
IGF1R	PPP6C	0.223	1
IGF1R	Amp_6q12	0.223	1
KRTAP5-10	PDGFRA	0.223	1
LGR6	Del_3q13.31	0.223	1
MSTN	PTPN22	0.223	1
PDGFRA	SLC27A5	0.223	1
RELN	7q-Amp	0.223	1
TP53	ZFX	0.223	1
7q-Amp	11p-Del	0.223	1
Amp_3p13	Del_4p16.3	0.223	1
BTK	Amp_6p24.3	0.224	1
C10orf54	THSD7B	0.224	1
DDX3X	Amp_8q24.21	0.224	1
GML	SLC9A11	0.224	1
MYO16	Del_6q21	0.224	1
MYO3B	OR6C74	0.224	1
MYO3B	RB1	0.224	1
TRERF1	14q-Del	0.224	1
18p-Del	Amp_8q24.21	0.224	1
Amp_1p12	Del_10q23.31	0.224	1
Amp_4q12	Amp_6p24.3	0.224	1
Amp_6q12	Amp_8q24.21	0.224	1
ANO4	6p-Del	0.225	1
C10orf54	CBL	0.225	1
C10orf54	RB1	0.225	1
CBL	NUDT11	0.225	1
COL3A1	PTEN	0.225	1
COL3A1	22q-Amp	0.225	1
DSG3	Del_1p36.31	0.225	1
DSG3	Del_4q34.3	0.225	1
NAP1L2	11q-Del	0.225	1
NGF	OXA1L	0.225	1
PTPN11	RQCD1	0.225	1
20q-Amp	Amp_12q14.1	0.225	1
8p-Amp	Amp_7q34	0.225	1
5q-Del	Del_16q12.1	0.225	1
Amp_5p15.33	Del_16p13.3	0.225	1
ATP5F1	CDC42BPA	0.226	1
ATP5F1	EZH2	0.226	1
ATP5F1	GLI1	0.226	1
ATP5F1	KIT	0.226	1
ATP5F1	KRT73	0.226	1
ATP5F1	RIPK4	0.226	1
CCK	CCNA1	0.226	1
CCK	CDC42BPA	0.226	1
CCK	GLI1	0.226	1
CCK	KIT	0.226	1
CCNA1	GNAQ	0.226	1
FAM58A	KIT	0.226	1
FAM58A	KRT73	0.226	1
GLI1	GNAQ	0.226	1
GLI1	KRAS	0.226	1
KEL	PPP6C	0.226	1
KEL	RAC1	0.226	1
KEL	Amp_6q12	0.226	1
KIT	KRAS	0.226	1
NF1	Amp_17q25.3	0.226	1
PPP6C	Del_4q34.3	0.226	1
TP53	Amp_22q13.2	0.226	1
11p-Del	Amp_20q13.33	0.226	1
Amp_3p13	Del_19p13.3	0.226	1
Del_1p22.1	Del_8p23.3	0.226	1
Del_6q21	Del_15q21.1	0.226	1
CCK	SLC9A11	0.227	1
FAM58A	SLC9A11	0.227	1
GNAQ	6p-Amp	0.227	1
KYNU	Amp_7q34	0.227	1
13q-Amp	Del_8p23.3	0.227	1
Amp_7q34	Amp_15q26.2	0.227	1
Del_16p13.3	Del_Xp21.1	0.227	1
CCNA1	Amp_6p24.3	0.228	1
CDK4	EPHA7	0.228	1
EZH2	Amp_13q31.3	0.228	1
GLI1	Amp_6p24.3	0.228	1
GML	Del_19p13.3	0.228	1
KIT	USP17L2	0.228	1
MYO16	OXA1L	0.228	1
S100A8	SLC38A4	0.228	1
7q-Amp	Del_15q13.3	0.228	1
Amp_12q14.1	Del_2q37.3	0.228	1
ARID2	SLC38A4	0.229	1
CBL	Amp_6p24.3	0.229	1
EPHA7	Del_5q12.1	0.229	1
NGF	Amp_6p24.3	0.229	1
PTPN22	Amp_20q13.33	0.229	1
RQCD1	Amp_6p24.3	0.229	1
APC	Del_5q31.3	0.23	1
EMG1	NF1	0.23	1
7p-Amp	11p-Del	0.23	1
8q-Amp	Amp_5p15.33	0.23	1
Amp_5p15.33	Del_16q24.3	0.23	1
ARID2	17p-Del	0.231	1
CNTN5	NRAS	0.231	1
HSD11B1	PARM1	0.231	1
HSD11B1	13q-Amp	0.231	1
KEL	POTEG	0.231	1
KEL	16q-Del	0.231	1
MYO16	USP17L2	0.231	1
MYO16	Amp_13q31.3	0.231	1
20p-Amp	Del_4q34.3	0.231	1
20q-Amp	Amp_7q34	0.231	1
17p-Del	Del_5q12.1	0.231	1
CDC42BPA	CDKN2A	0.232	1
CDKN2A	GLI1	0.232	1
CDKN2A	RIPK4	0.232	1
DSG3	NRAS	0.232	1
NF1	Amp_1p12	0.232	1
PTPN11	Del_9p21.3	0.232	1
RELN	Del_19p13.3	0.232	1
TP63	Del_10p15.3	0.232	1
APCS	9q-Del	0.233	1
CYP3A5	9q-Del	0.233	1
FGFR2	20p-Amp	0.233	1
HRAS	Del_10q21.1	0.233	1
NBPF1	POTEG	0.233	1
OR4S2	Del_16q23.1	0.233	1
PDGFRA	Del_13q34	0.233	1
PTEN	Del_15q13.3	0.233	1
8p-Amp	Del_12q23.3	0.233	1
Amp_7p22.1	Del_13q34	0.233	1
Del_5p15.31	Del_13q34	0.233	1
CNTN5	16q-Del	0.234	1
TTN	Amp_13q31.3	0.234	1
ACSBG1	NF1	0.235	1
APCS	Del_8p23.3	0.235	1
CAMTA1	Amp_1q44	0.235	1
CDKN2A	Amp_3p13	0.235	1
IGF1R	NF1	0.235	1
MPP7	Del_11q23.3	0.235	1
MYO3B	USP9X	0.235	1
SLC9A11	Del_13q34	0.235	1
SYK	Del_8p23.3	0.235	1
20q-Amp	Del_10q21.1	0.235	1
APC	C15orf23	0.236	1
C15orf23	PDGFRA	0.236	1
C15orf23	Del_5p15.31	0.236	1
CPA3	6q-Del	0.236	1
CTNNA3	NGF	0.236	1
DCLK3	MSTN	0.236	1
EMG1	9p-Del	0.236	1
GUCY2F	TRERF1	0.236	1
IDH1	SLC38A4	0.236	1
KRTAP5-10	POTEG	0.236	1
MAN1A1	MYO16	0.236	1
MYO16	NUP214	0.236	1
MYO16	ZFX	0.236	1
MYO16	Amp_4q12	0.236	1
NBPF1	ZNF780B	0.236	1
OR6C74	Amp_3p13	0.236	1
PDGFRA	13q-Amp	0.236	1
PPP6C	6q-Del	0.236	1
SELP	ZFX	0.236	1
5q-Del	Del_13q34	0.236	1
CYP3A4	Del_6q26	0.237	1
IDH1	Del_16p13.3	0.237	1
POTEG	6q-Del	0.237	1
20p-Amp	6q-Del	0.237	1
Amp_4q12	Amp_12q14.1	0.237	1
Amp_4q12	Del_16p13.3	0.237	1
Amp_12q15	Del_16p13.3	0.237	1
Amp_20q13.33	Del_10q23.31	0.237	1
Amp_22q13.2	Del_10q23.31	0.237	1
HRAS	NAP1L2	0.238	1
NUDT11	16q-Del	0.238	1
5q-Del	6p-Del	0.238	1
C10orf28	DMC1	0.239	1
C10orf28	Amp_1p12	0.239	1
CTNNB1	OR4S2	0.239	1
EMG1	Amp_1p12	0.239	1
IGF1R	Del_5q31.3	0.239	1
MSTN	TP63	0.239	1
9p-Del	Amp_1p12	0.239	1
APCS	EPHA4	0.24	1
CAMTA1	1q-Amp	0.24	1
CCNA1	RELN	0.24	1
CYP3A5	Amp_11q13.3	0.24	1
EZH2	RELN	0.24	1
IGF1R	Amp_11q13.3	0.24	1
KYNU	RELN	0.24	1
NAP1L2	1q-Amp	0.24	1
SYK	6p-Del	0.24	1
10q-Del	Amp_12q14.1	0.24	1
ARID2	PPP6C	0.241	1
BRAF	Del_5q12.1	0.241	1
C7orf58	CYP3A4	0.241	1
KCND2	17p-Del	0.241	1
MYO3B	16q-Del	0.241	1
ACSBG1	ATP5F1	0.242	1
APC	Del_15q21.1	0.242	1
APCS	ATP5F1	0.242	1
ATP5F1	IGF1R	0.242	1
ATP5F1	SYK	0.242	1
CAMTA1	CYP3A4	0.242	1
CAMTA1	DDX3X	0.242	1
CCK	CYP3A5	0.242	1
CCK	SYK	0.242	1
CYP3A5	KRAS	0.242	1
DDX3X	PTEN	0.242	1
DDX3X	22q-Amp	0.242	1
GNAQ	IGF1R	0.242	1
GNAQ	SYK	0.242	1
IGF1R	KRAS	0.242	1
KRTAP5-10	6q-Del	0.242	1
MSTN	6q-Del	0.242	1
NRAS	Del_14q23.3	0.242	1
RAC1	22q-Amp	0.242	1
SYK	Del_9p21.3	0.242	1
TP53	9q-Del	0.242	1
13q-Amp	Amp_1p12	0.242	1
20q-Amp	6p-Amp	0.242	1
22q-Amp	Amp_6q12	0.242	1
6p-Amp	Amp_5p15.33	0.242	1
7p-Amp	17p-Del	0.242	1
7p-Amp	Amp_5p15.33	0.242	1
8p-Amp	Del_15q21.1	0.242	1
Del_5p15.31	Del_6q21	0.242	1
Del_5p15.31	Del_15q21.1	0.242	1
CYP3A5	Amp_7q34	0.243	1
GML	22q-Amp	0.243	1
CCNA1	Del_16q12.1	0.244	1
CTNNA3	MYO16	0.244	1
7p-Amp	Del_5q31.3	0.244	1
Amp_22q13.2	Del_4p16.3	0.244	1
APC	DSG3	0.245	1
OR6C74	TTN	0.245	1
RQCD1	TTN	0.245	1
TP53	Del_5p15.31	0.245	1
TPTE	Del_10q26.3	0.245	1
7q-Amp	8p-Amp	0.245	1
Amp_7p22.1	Del_1p22.1	0.245	1
Amp_7p22.1	Del_4p16.3	0.245	1
HRAS	PDGFRA	0.246	1
6q-Del	Amp_6p24.3	0.246	1
Del_13q34	Del_16p13.3	0.246	1
C10orf54	MSTN	0.247	1
C10orf54	SLC27A5	0.247	1
C10orf54	ZNF780B	0.247	1
CDK4	KRTAP5-10	0.247	1
CDK4	MSTN	0.247	1
CPA3	9q-Del	0.247	1
IGF1R	Del_15q13.3	0.247	1
KRTAP5-10	OXA1L	0.247	1
NUDT11	SLC27A5	0.247	1
NUDT11	ZNF780B	0.247	1
OXA1L	SLC27A5	0.247	1
OXA1L	ZNF780B	0.247	1
PTPN11	SLC27A5	0.247	1
PTPN11	ZNF780B	0.247	1
S100A8	ZNF780B	0.247	1
SLC9A11	USP9X	0.247	1
USP17L2	Del_5q31.3	0.247	1
USP9X	6p-Amp	0.247	1
Amp_1q21.3	Del_10q23.31	0.247	1
CDK4	7p-Amp	0.248	1
KCND2	OR6C74	0.248	1
KCND2	RQCD1	0.248	1
MAN1A1	8q-Amp	0.248	1
NUDT11	TPTE	0.248	1
TP63	ZFX	0.248	1
22q-Amp	Amp_6p24.3	0.248	1
8q-Amp	Amp_4q12	0.248	1
CYP3A5	7q-Amp	0.249	1
DDX3X	TP63	0.249	1
EMG1	MLL	0.249	1
EMG1	17p-Del	0.249	1
RAC1	Del_16q24.3	0.249	1
SYK	7q-Amp	0.249	1
XIRP2	Amp_17q25.3	0.249	1
8q-Amp	Amp_6q12	0.249	1
ALPK2	KYNU	0.25	1
ARID2	TP53	0.25	1
C7orf58	POTEG	0.25	1
CBL	RB1	0.25	1
CYP3A4	HSD11B1	0.25	1
CYP3A4	Del_Xp21.1	0.25	1
MLL	NAP1L2	0.25	1
NGF	OR6C74	0.25	1
NGF	RB1	0.25	1
OR6C74	RB1	0.25	1
OR6C74	RQCD1	0.25	1
RB1	RQCD1	0.25	1
22q-Amp	17p-Del	0.25	1
22q-Amp	Amp_3p13	0.25	1
Amp_7q34	Del_10q21.1	0.25	1
Amp_15q26.2	Amp_22q13.2	0.25	1
ALPK2	CCK	0.251	1
ALPK2	GNAQ	0.251	1
CCK	Amp_20q13.33	0.251	1
OR4S2	Amp_3p13	0.251	1
RQCD1	Del_5q31.3	0.251	1
16q-Del	Amp_4q12	0.251	1
Amp_1q21.3	Del_2q37.3	0.251	1
BRAF	9q-Del	0.252	1
MPP7	7p-Amp	0.252	1
NGF	10p-Del	0.252	1
RIPK4	Del_10q23.31	0.252	1
7p-Amp	Del_4p16.3	0.252	1
APC	FRMPD4	0.253	1
MPP7	Amp_15q26.2	0.253	1
1q-Amp	6q-Del	0.253	1
Amp_3p13	Del_10q26.3	0.253	1
Amp_15q26.2	Del_1p22.1	0.253	1
Amp_17q25.3	Del_10q23.31	0.253	1
CCK	NRAS	0.254	1
20q-Amp	Del_8p23.3	0.254	1
20q-Amp	Del_15q21.1	0.254	1
5q-Del	Del_1p36.31	0.254	1
Amp_12q14.1	Del_14q23.3	0.254	1
Amp_12q14.1	Del_16q12.1	0.254	1
DCLK3	HRAS	0.255	1
DCLK3	13q-Amp	0.255	1
DCLK3	Del_12q23.3	0.255	1
FGFR2	HRAS	0.255	1
GUCY2F	NBPF1	0.255	1
HRAS	NBPF1	0.255	1
RIPK4	10p-Del	0.255	1
20p-Amp	Del_13q34	0.255	1
11p-Del	Amp_11q13.3	0.255	1
6p-Del	Del_1p36.31	0.255	1
Amp_7p22.1	Del_1p36.31	0.255	1
Del_1p36.31	Del_5q31.3	0.255	1
FLT1	Del_12q23.3	0.256	1
FLT1	Del_13q34	0.256	1
GML	Amp_22q13.2	0.256	1
MLL	7q-Amp	0.256	1
Amp_20q13.33	Del_8p23.3	0.256	1
Del_3q13.31	Del_14q23.3	0.256	1
Del_3q13.31	Del_16q12.1	0.256	1
Del_4q34.3	Del_12q23.3	0.256	1
Del_4q34.3	Del_13q34	0.256	1
BTK	C15orf23	0.257	1
BTK	13q-Amp	0.257	1
C15orf23	ZFX	0.257	1
GUCY2F	MLL	0.257	1
GUCY2F	ZFX	0.257	1
GUCY2F	Amp_12q15	0.257	1
IDH1	13q-Amp	0.257	1
NUP214	PARM1	0.257	1
PARM1	17p-Del	0.257	1
PARM1	Amp_12q15	0.257	1
Del_6q26	Del_16p13.3	0.257	1
C10orf28	CCNA1	0.258	1
C10orf28	CDC42BPA	0.258	1
C10orf28	EZH2	0.258	1
C10orf28	GLI1	0.258	1
C10orf28	RIPK4	0.258	1
CYP3A4	Del_8p23.3	0.258	1
SYK	USP17L2	0.258	1
Amp_6q12	Del_8p23.3	0.258	1
ARID2	HSD11B1	0.259	1
ATP5F1	HSD11B1	0.259	1
ATP5F1	STK19	0.259	1
C7orf58	HSD11B1	0.259	1
C7orf58	STK19	0.259	1
CCK	HSD11B1	0.259	1
GNAQ	STK19	0.259	1
HSD11B1	KRAS	0.259	1
NUDT11	Del_11q23.3	0.259	1
RAC1	Amp_7q34	0.259	1
S100A8	Del_11q23.3	0.259	1
ACSBG1	MLL	0.26	1
APC	Del_15q13.3	0.26	1
ATP5F1	DSG3	0.26	1
ATP5F1	11p-Del	0.26	1
CCK	TP53	0.26	1
CCNA1	7p-Amp	0.26	1
CDK4	Del_4q34.3	0.26	1
COL3A1	CYP3A5	0.26	1
CYP3A5	11q-Del	0.26	1
CYP3A5	17p-Del	0.26	1
EMG1	6q-Del	0.26	1
FAM58A	TP53	0.26	1
FLT1	PTPN11	0.26	1
GLI1	7p-Amp	0.26	1
KEL	OXA1L	0.26	1
KEL	S100A8	0.26	1
NGF	7q-Amp	0.26	1
OR6C74	7q-Amp	0.26	1
RB1	Amp_17q25.3	0.26	1
RQCD1	Amp_17q25.3	0.26	1
RQCD1	Del_4p16.3	0.26	1
S100A8	Del_1p36.31	0.26	1
SYK	17p-Del	0.26	1
7p-Amp	Del_19p13.3	0.26	1
Amp_1p12	Del_5p15.31	0.26	1
CTNNB1	Del_11q23.3	0.261	1
KIT	Del_19p13.3	0.261	1
11p-Del	Amp_7q34	0.261	1
Amp_15q26.2	Del_11q23.3	0.261	1
BRAF	Del_19p13.3	0.262	1
CYP3A4	PTPN22	0.262	1
DDX3X	PTPN22	0.262	1
DDX3X	8p-Amp	0.262	1
PPP6C	PTPN22	0.262	1
RAC1	TRERF1	0.262	1
RPTN	6q-Del	0.262	1
TPTE	6q-Del	0.262	1
8p-Amp	Amp_6q12	0.262	1
Amp_8q24.21	Del_12q23.3	0.262	1
CPA3	TPTE	0.263	1
CTNNB1	DSG3	0.263	1
CTNNB1	11p-Del	0.263	1
CYP3A5	TTN	0.263	1
DSG3	Amp_15q26.2	0.263	1
FRMPD4	MSTN	0.263	1
FRMPD4	ZNF780B	0.263	1
KYNU	TPTE	0.263	1
LGR6	TPTE	0.263	1
MAP2K1	TP53	0.263	1
MLL	Amp_7p22.1	0.263	1
MPP7	11p-Del	0.263	1
MYO3B	SLC27A5	0.263	1
SYK	TTN	0.263	1
TPTE	Amp_15q26.2	0.263	1
TPTE	Del_11q23.3	0.263	1
7p-Amp	Amp_15q26.2	0.263	1
Del_4q34.3	Del_16q24.3	0.263	1
6p-Amp	Amp_20q13.33	0.264	1
10q-Del	Amp_17q25.3	0.264	1
DDX3X	Del_10q21.1	0.265	1
HRAS	XIRP2	0.265	1
MPP7	Del_19p13.3	0.265	1
1q-Amp	Del_15q13.3	0.265	1
20p-Amp	Amp_7q34	0.265	1
CDKN2A	SLC9A11	0.266	1
NF1	Amp_1q21.3	0.266	1
SLC9A11	5q-Del	0.266	1
USP17L2	5q-Del	0.266	1
5q-Del	Amp_4q12	0.266	1
5q-Del	Amp_12q15	0.266	1
9q-Del	Del_8p23.3	0.266	1
Del_5q31.3	Del_16p13.3	0.266	1
CNTN5	Del_11q23.3	0.267	1
EMG1	9q-Del	0.267	1
MLL	MPP7	0.267	1
MPP7	9p-Del	0.267	1
PTEN	6p-Del	0.267	1
9p-Del	Amp_17q25.3	0.267	1
Amp_5p15.33	Del_4p16.3	0.267	1
CAMTA1	CDKN2A	0.268	1
CDKN2A	NAP1L2	0.268	1
CDKN2A	22q-Amp	0.268	1
EMG1	Del_16q12.1	0.268	1
KIT	SLC9A11	0.268	1
KIT	6p-Amp	0.268	1
NGF	NRAS	0.268	1
NRAS	RB1	0.268	1
CBL	COL3A1	0.269	1
CBL	11q-Del	0.269	1
COL3A1	RB1	0.269	1
DMC1	NUDT11	0.269	1
DSG3	Del_10p15.3	0.269	1
EPHA7	MAP2K1	0.269	1
HRAS	10q-Del	0.269	1
KYNU	SLC38A4	0.269	1
MAP2K1	SELP	0.269	1
NF1	Del_2q37.3	0.269	1
PTEN	RELN	0.269	1
SELP	Amp_15q26.2	0.269	1
18p-Del	Del_8p23.3	0.269	1
18p-Del	Del_15q21.1	0.269	1
MYO3B	Del_6q21	0.27	1
NBPF1	9p-Del	0.27	1
NRAS	USH2A	0.27	1
TPTE	7q-Amp	0.27	1
ALPK2	Del_16q24.3	0.271	1
ANO4	Del_12q23.3	0.271	1
C7orf58	S100A8	0.271	1
CAMTA1	KCND2	0.271	1
CDK4	14q-Del	0.271	1
CYP3A5	1q-Amp	0.271	1
EPHA7	Amp_1p12	0.271	1
MYO16	Del_15q13.3	0.271	1
OR4S2	TTN	0.271	1
Amp_6p24.3	Del_10q23.31	0.271	1
Amp_17q25.3	Del_9p21.3	0.271	1
CDKN2A	TPTE	0.272	1
EPHA4	Del_5q12.1	0.272	1
HRAS	MYO3B	0.272	1
TTN	7p-Amp	0.272	1
ACSBG1	CDKN2A	0.273	1
C15orf23	Del_13q34	0.273	1
CBL	MYO16	0.273	1
CDKN2A	SYK	0.273	1
CNTN5	PTPN11	0.273	1
DMC1	POTEG	0.273	1
GML	POTEG	0.273	1
GUCY2F	Del_12q23.3	0.273	1
KRT73	NRAS	0.273	1
MYO16	RB1	0.273	1
MYO16	RQCD1	0.273	1
OR6C74	SELP	0.273	1
OR6C74	SLC38A4	0.273	1
RB1	SLC38A4	0.273	1
SELP	Del_10q26.3	0.273	1
9q-Del	Amp_6p24.3	0.273	1
Amp_4q12	Del_10q26.3	0.273	1
ARID2	Del_16q12.1	0.274	1
C7orf58	Del_14q23.3	0.274	1
CBL	MSTN	0.274	1
CPA3	Amp_1p12	0.274	1
MSTN	NGF	0.274	1
MSTN	OR6C74	0.274	1
MSTN	RB1	0.274	1
OR6C74	ZNF780B	0.274	1
XIRP2	Del_2q37.3	0.274	1
7q-Amp	8q-Amp	0.274	1
ATP5F1	BTK	0.275	1
ATP5F1	MAN1A1	0.275	1
ATP5F1	ZFX	0.275	1
BTK	KRAS	0.275	1
CCK	MAN1A1	0.275	1
CCK	NUP214	0.275	1
CCK	ZFX	0.275	1
CCK	Amp_4q12	0.275	1
FAM58A	NUP214	0.275	1
GNAQ	ZFX	0.275	1
GNAQ	Amp_12q15	0.275	1
IDH1	KRAS	0.275	1
KRAS	MAN1A1	0.275	1
KRAS	Amp_4q12	0.275	1
KRAS	Amp_12q15	0.275	1
Amp_3p13	Del_5p15.31	0.275	1
Amp_11q13.3	Del_9p23	0.275	1
C7orf58	Del_13q34	0.276	1
COL3A1	17p-Del	0.276	1
COL3A1	Amp_5p15.33	0.276	1
TP53	20p-Amp	0.276	1
1q-Amp	Del_5p15.31	0.276	1
20p-Amp	11p-Del	0.276	1
14q-Del	5q-Del	0.276	1
6q-Del	Del_Xp21.1	0.276	1
APCS	EMG1	0.277	1
BTK	Amp_6q12	0.277	1
C10orf28	CYP3A5	0.277	1
C10orf28	SYK	0.277	1
CCK	TP63	0.277	1
CCK	8q-Amp	0.277	1
CCNA1	PTEN	0.277	1
CPA3	NUP214	0.277	1
CTNNA3	KRTAP5-10	0.277	1
CTNNA3	SLC27A5	0.277	1
CYP3A4	MAN1A1	0.277	1
DDX3X	MAN1A1	0.277	1
FAM58A	TP63	0.277	1
GLI1	NAP1L2	0.277	1
IDH1	LGR6	0.277	1
IDH1	RAC1	0.277	1
KRAS	TP63	0.277	1
MAN1A1	PPP6C	0.277	1
MAN1A1	RAC1	0.277	1
NUP214	PPP6C	0.277	1
PPP6C	Amp_4q12	0.277	1
PPP6C	Amp_12q15	0.277	1
PTEN	RIPK4	0.277	1
RAC1	Amp_4q12	0.277	1
THSD7B	Amp_6q12	0.277	1
TTN	1q-Amp	0.277	1
ZFX	Amp_6q12	0.277	1
11p-Del	Del_15q21.1	0.277	1
Amp_4q12	Amp_6q12	0.277	1
CCNA1	Del_6q21	0.278	1
EMG1	Del_16q23.1	0.278	1
IDH1	Del_9p21.3	0.278	1
KIT	Del_6q21	0.278	1
RELN	6p-Del	0.278	1
Amp_12q15	Del_9p21.3	0.278	1
Del_12q23.3	Del_13q34	0.278	1
CBL	1q-Amp	0.279	1
NGF	1q-Amp	0.279	1
TP63	8p-Amp	0.279	1
ATP5F1	USH2A	0.28	1
BRAF	COL3A1	0.28	1
CTNNB1	Amp_6p24.3	0.28	1
EPHA7	Del_11q23.3	0.28	1
GNAQ	USH2A	0.28	1
KRAS	USH2A	0.28	1
MYO16	Del_11q23.3	0.28	1
7q-Amp	Amp_12q14.1	0.28	1
7q-Amp	Del_2q37.3	0.28	1
7q-Amp	Del_16p13.3	0.28	1
BTK	Del_4q34.3	0.281	1
CPA3	NBPF1	0.281	1
DCLK3	DDX3X	0.281	1
DCLK3	PPP6C	0.281	1
DCLK3	Amp_6q12	0.281	1
FLT1	ZFX	0.281	1
FLT1	Amp_4q12	0.281	1
FLT1	Amp_12q15	0.281	1
KRTAP5-10	Del_9p21.3	0.281	1
KYNU	10q-Del	0.281	1
LGR6	POTEG	0.281	1
MAN1A1	Del_4q34.3	0.281	1
POTEG	RAC1	0.281	1
8q-Amp	Del_16q12.1	0.281	1
Amp_3p13	Del_10q23.31	0.281	1
Amp_12q15	Del_4q34.3	0.281	1
BRAF	Amp_3p13	0.282	1
C15orf23	CTNNB1	0.282	1
CDK4	NF1	0.282	1
CTNNB1	GUCY2F	0.282	1
CTNNB1	13q-Amp	0.282	1
EPHA6	Del_11q23.3	0.282	1
MAP2K1	PARM1	0.282	1
MAP2K1	13q-Amp	0.282	1
9q-Del	Del_Xp21.1	0.282	1
Amp_1p12	Amp_6p24.3	0.282	1
Amp_1p12	Amp_22q13.2	0.282	1
Amp_6p24.3	Del_15q13.3	0.282	1
Del_10q26.3	Del_13q34	0.283	1
NGF	Del_10p15.3	0.284	1
6p-Amp	Amp_12q14.1	0.284	1
6q-Del	Amp_1q21.3	0.284	1
CTNNB1	16q-Del	0.285	1
EPHA7	Del_19p13.3	0.285	1
MPP7	USP9X	0.285	1
OR4S2	Del_4p16.3	0.285	1
RQCD1	16q-Del	0.285	1
Amp_13q31.3	Del_1p36.31	0.285	1
BRAF	IGF1R	0.286	1
BRAF	SYK	0.286	1
PTEN	Del_16q12.1	0.286	1
SELP	7p-Amp	0.286	1
7p-Amp	8q-Amp	0.286	1
Amp_7q34	Del_19p13.3	0.286	1
CCK	THSD7B	0.287	1
CDKN2A	10p-Del	0.287	1
CDKN2A	Amp_17q25.3	0.287	1
CYP3A5	Del_14q23.3	0.287	1
CYP3A5	Del_16q12.1	0.287	1
IGF1R	RPTN	0.287	1
KEL	Del_11q23.3	0.287	1
RPTN	SYK	0.287	1
5q-Del	Amp_1q21.3	0.287	1
5q-Del	Amp_3p13	0.287	1
APC	EPHA4	0.288	1
GML	Del_13q34	0.288	1
HSD11B1	Amp_13q31.3	0.288	1
PTPN22	Amp_11q13.3	0.288	1
6p-Amp	11p-Del	0.288	1
HRAS	KCND2	0.289	1
POTEG	Amp_1p12	0.289	1
POTEG	Del_15q13.3	0.289	1
USP9X	Amp_20q13.33	0.289	1
USP9X	Amp_22q13.2	0.289	1
13q-Amp	Del_14q23.3	0.289	1
20p-Amp	Del_15q13.3	0.289	1
18p-Del	Amp_1p12	0.289	1
18p-Del	Del_15q13.3	0.289	1
Amp_1p12	Del_2q37.3	0.289	1
Amp_1q21.3	Del_10q26.3	0.289	1
Amp_11q13.3	Del_8p23.3	0.289	1
Amp_11q13.3	Del_15q21.1	0.289	1
C10orf54	EZH2	0.29	1
C10orf54	KIT	0.29	1
C10orf54	KRT73	0.29	1
CCNA1	NUDT11	0.29	1
CCNA1	PTPN11	0.29	1
CCNA1	S100A8	0.29	1
CTNNB1	Del_16q24.3	0.29	1
EZH2	OXA1L	0.29	1
EZH2	S100A8	0.29	1
GLI1	NUDT11	0.29	1
GLI1	OXA1L	0.29	1
GLI1	S100A8	0.29	1
KCND2	ZNF780B	0.29	1
KIT	OXA1L	0.29	1
KIT	S100A8	0.29	1
KRT73	NUDT11	0.29	1
MAP2K1	TP63	0.29	1
PTPN11	RIPK4	0.29	1
RIPK4	S100A8	0.29	1
11p-Del	Amp_13q31.3	0.29	1
ATP5F1	KYNU	0.291	1
ATP5F1	MAP2K1	0.291	1
CCNA1	CNTN5	0.291	1
CNTN5	KIT	0.291	1
CTNNB1	GNAQ	0.291	1
MLL	PPP6C	0.291	1
MLL	Amp_6q12	0.291	1
MPP7	PTEN	0.291	1
MPP7	SELP	0.291	1
NRAS	Del_5q12.1	0.291	1
SELP	Del_1p22.1	0.291	1
SELP	Del_4p16.3	0.291	1
20q-Amp	Amp_6q12	0.291	1
EPHA6	PPP6C	0.292	1
EPHA6	Amp_6q12	0.292	1
NAP1L2	USP17L2	0.292	1
POTEG	Del_10p15.3	0.292	1
PTEN	USP17L2	0.292	1
SELP	TP53	0.292	1
SELP	11p-Del	0.292	1
20p-Amp	Del_10p15.3	0.292	1
ANO4	EZH2	0.293	1
ANO4	KIT	0.293	1
APC	CCNA1	0.293	1
APC	GLI1	0.293	1
CCNA1	PDGFRA	0.293	1
EZH2	PTPN22	0.293	1
FRMPD4	13q-Amp	0.293	1
FRMPD4	7p-Amp	0.293	1
GLI1	TRERF1	0.293	1
GLI1	8p-Amp	0.293	1
GUCY2F	MYO3B	0.293	1
KIT	TRERF1	0.293	1
KIT	8p-Amp	0.293	1
KIT	Del_5p15.31	0.293	1
KRT73	PDGFRA	0.293	1
KRT73	Del_5p15.31	0.293	1
MYO3B	13q-Amp	0.293	1
MYO3B	7p-Amp	0.293	1
OXA1L	Amp_1p12	0.293	1
PTPN11	Amp_1p12	0.293	1
SELP	17p-Del	0.293	1
6p-Amp	Amp_3p13	0.293	1
CYP3A5	RELN	0.294	1
MPP7	7q-Amp	0.294	1
ANO4	7p-Amp	0.295	1
ARID2	Del_6q21	0.295	1
CDKN2A	Del_9p21.3	0.295	1
TPTE	Amp_7p22.1	0.295	1
C7orf58	NUP214	0.296	1
1q-Amp	17p-Del	0.296	1
1q-Amp	Amp_5p15.33	0.296	1
Amp_4q12	Del_5q12.1	0.296	1
Amp_6p24.3	Del_1p36.31	0.296	1
BRAF	Del_4q34.3	0.297	1
DMC1	NGF	0.297	1
DMC1	OR6C74	0.297	1
GML	RB1	0.297	1
HRAS	Del_1p22.1	0.297	1
HRAS	Del_4p16.3	0.297	1
KCND2	PDGFRA	0.297	1
NGF	RELN	0.297	1
RB1	RELN	0.297	1
RQCD1	5q-Del	0.297	1
SLC27A5	9p-Del	0.297	1
TP63	11p-Del	0.297	1
TPTE	11q-Del	0.297	1
TTN	Del_11q23.3	0.297	1
20p-Amp	Del_6q21	0.297	1
6p-Del	Amp_12q15	0.297	1
Amp_4q12	Amp_11q13.3	0.297	1
Amp_11q13.3	Amp_12q15	0.297	1
Amp_13q31.3	Del_9p21.3	0.297	1
Del_8p23.3	Del_12q23.3	0.297	1
APC	CDKN2A	0.298	1
CDKN2A	8p-Amp	0.298	1
HRAS	Del_10q26.3	0.298	1
COL3A1	Del_10q23.31	0.299	1
CYP3A5	Del_16q23.1	0.3	1
IGF1R	Del_16q23.1	0.3	1
MSTN	ZNF780B	0.3	1
RQCD1	USH2A	0.3	1
1q-Amp	Amp_7q34	0.3	1
20p-Amp	Amp_3p13	0.3	1
5q-Del	Del_15q21.1	0.3	1
C7orf58	Del_4q34.3	0.301	1
EPHA6	Amp_6p24.3	0.301	1
HSD11B1	MLL	0.301	1
TRERF1	Amp_7p22.1	0.301	1
17p-Del	Amp_8q24.21	0.301	1
CAMTA1	Del_11q23.3	0.302	1
CCK	EPHA6	0.302	1
CPA3	Del_12q23.3	0.302	1
DDX3X	Del_13q34	0.302	1
EPHA6	KRAS	0.302	1
MYO3B	Del_12q23.3	0.302	1
NRAS	TP63	0.302	1
PPP6C	Del_12q23.3	0.302	1
TTN	9p-Del	0.302	1
XIRP2	9q-Del	0.302	1
22q-Amp	Del_11q23.3	0.302	1
Amp_6q12	Del_13q34	0.302	1
C7orf58	USP17L2	0.303	1
C7orf58	Amp_13q31.3	0.303	1
CNTN5	PPP6C	0.303	1
CNTN5	RAC1	0.303	1
DDX3X	9p-Del	0.303	1
DMC1	FRMPD4	0.303	1
DMC1	MYO3B	0.303	1
EPHA7	USP9X	0.303	1
FRMPD4	GML	0.303	1
FRMPD4	Amp_8q24.21	0.303	1
GML	MYO3B	0.303	1
MYO16	OR4S2	0.303	1
OR4S2	SELP	0.303	1
SLC27A5	Amp_6p24.3	0.303	1
Amp_1q21.3	Del_15q13.3	0.303	1
C10orf54	MLL	0.304	1
CDK4	17p-Del	0.304	1
CDK4	Amp_5p15.33	0.304	1
CPA3	MAP2K1	0.304	1
CTNNB1	CYP3A4	0.304	1
CTNNB1	PPP6C	0.304	1
CTNNB1	Amp_6q12	0.304	1
CYP3A4	KYNU	0.304	1
DDX3X	MAP2K1	0.304	1
KRTAP5-10	Del_1p22.1	0.304	1
KRTAP5-10	Del_4p16.3	0.304	1
KYNU	LGR6	0.304	1
KYNU	PPP6C	0.304	1
NUDT11	Amp_5p15.33	0.304	1
OXA1L	17p-Del	0.304	1
RAC1	Amp_15q26.2	0.304	1
ZNF780B	Del_1p22.1	0.304	1
ZNF780B	Del_4p16.3	0.304	1
Amp_6q12	Amp_15q26.2	0.304	1
BRAF	MLL	0.305	1
EMG1	Amp_1q44	0.305	1
HRAS	SLC38A4	0.305	1
PARM1	Del_16q23.1	0.305	1
RELN	Del_15q13.3	0.305	1
16q-Del	Del_3q13.31	0.305	1
ATP5F1	USP9X	0.306	1
C7orf58	7q-Amp	0.306	1
GNAQ	USP9X	0.306	1
KRAS	USP9X	0.306	1
TP63	9q-Del	0.306	1
TP63	Amp_1q21.3	0.306	1
ANO4	C10orf28	0.307	1
EPHA4	Amp_1p12	0.307	1
HRAS	Del_10q23.31	0.307	1
6p-Del	Del_15q13.3	0.307	1
CDKN2A	CPA3	0.308	1
CDKN2A	CYP3A4	0.308	1
CDKN2A	PPP6C	0.308	1
OR4S2	PARM1	0.308	1
OR4S2	13q-Amp	0.308	1
TP53	Del_12q23.3	0.308	1
USH2A	Amp_6p24.3	0.308	1
USP9X	13q-Amp	0.308	1
8q-Amp	Del_16q23.1	0.308	1
Amp_6p24.3	Del_10q21.1	0.308	1
BRAF	RPTN	0.309	1
CCNA1	DCLK3	0.309	1
CCNA1	NBPF1	0.309	1
CCNA1	Del_2q37.3	0.309	1
CDC42BPA	POTEG	0.309	1
DCLK3	GLI1	0.309	1
EPHA4	Del_2q37.3	0.309	1
EZH2	NBPF1	0.309	1
EZH2	Del_2q37.3	0.309	1
FGFR2	KIT	0.309	1
GLI1	20p-Amp	0.309	1
KIT	Del_2q37.3	0.309	1
KRT73	POTEG	0.309	1
KRT73	18p-Del	0.309	1
MYO16	Del_6q26	0.309	1
NBPF1	RIPK4	0.309	1
NBPF1	17p-Del	0.309	1
OR6C74	THSD7B	0.309	1
20p-Amp	6p-Del	0.309	1
20p-Amp	Amp_5p15.33	0.309	1
17p-Del	18p-Del	0.309	1
18p-Del	6p-Del	0.309	1
6q-Del	Amp_12q14.1	0.309	1
Amp_11q13.3	Del_2q37.3	0.309	1
ACSBG1	CDK4	0.31	1
ACSBG1	NUDT11	0.31	1
ACSBG1	OXA1L	0.31	1
ACSBG1	S100A8	0.31	1
APCS	CDK4	0.31	1
APCS	OXA1L	0.31	1
APCS	S100A8	0.31	1
C10orf54	TTN	0.31	1
CBL	KEL	0.31	1
CDK4	CYP3A5	0.31	1
COL3A1	Amp_8q24.21	0.31	1
CYP3A5	S100A8	0.31	1
FLT1	OR6C74	0.31	1
IGF1R	OXA1L	0.31	1
KEL	RB1	0.31	1
NUDT11	SYK	0.31	1
OR6C74	Del_1p36.31	0.31	1
PPP6C	Amp_1q44	0.31	1
PTPN11	SYK	0.31	1
RAC1	Amp_1q44	0.31	1
RB1	Del_1p36.31	0.31	1
RQCD1	Del_4q34.3	0.31	1
S100A8	SYK	0.31	1
SELP	Amp_6p24.3	0.31	1
ACSBG1	22q-Amp	0.311	1
APCS	22q-Amp	0.311	1
CYP3A5	NAP1L2	0.311	1
CYP3A5	PTEN	0.311	1
EZH2	USH2A	0.311	1
IGF1R	PTEN	0.311	1
NAP1L2	SYK	0.311	1
TPTE	9p-Del	0.311	1
9p-Del	Del_15q21.1	0.311	1
Del_10q23.31	Del_13q34	0.311	1
C15orf23	Amp_3p13	0.312	1
COL3A1	Del_9p23	0.312	1
HRAS	9p-Del	0.312	1
KCND2	5q-Del	0.312	1
MAN1A1	Del_8p23.3	0.312	1
7p-Amp	Del_15q21.1	0.312	1
8q-Amp	18p-Del	0.312	1
C10orf28	IDH1	0.313	1
C10orf28	MAN1A1	0.313	1
CAMTA1	MYO16	0.313	1
CYP3A5	SLC9A11	0.313	1
EMG1	IDH1	0.313	1
IGF1R	6p-Amp	0.313	1
NBPF1	1q-Amp	0.313	1
RPTN	Del_10q21.1	0.313	1
11q-Del	Amp_17q25.3	0.313	1
ACSBG1	Del_10q26.3	0.314	1
KRTAP5-10	Del_6q21	0.314	1
PDGFRA	Amp_13q31.3	0.314	1
TPTE	7p-Amp	0.314	1
USP17L2	8p-Amp	0.314	1
Amp_13q31.3	Del_5p15.31	0.314	1
C10orf54	CDKN2A	0.315	1
CDKN2A	OXA1L	0.315	1
CDKN2A	SLC38A4	0.315	1
RPTN	7q-Amp	0.315	1
USH2A	9q-Del	0.315	1
Del_5p15.31	Del_Xp21.1	0.315	1
APCS	7p-Amp	0.316	1
CDKN2A	HSD11B1	0.316	1
CYP3A5	TPTE	0.316	1
ALPK2	C10orf28	0.317	1
ALPK2	EMG1	0.317	1
BTK	Amp_13q31.3	0.317	1
C10orf28	Amp_20q13.33	0.317	1
C10orf28	Amp_22q13.2	0.317	1
CAMTA1	Amp_1q21.3	0.317	1
DSG3	EZH2	0.317	1
DSG3	KIT	0.317	1
IDH1	Amp_13q31.3	0.317	1
NAP1L2	Amp_1q21.3	0.317	1
NGF	7p-Amp	0.317	1
RB1	TPTE	0.317	1
TRERF1	Del_14q23.3	0.317	1
TRERF1	Del_16q12.1	0.317	1
USH2A	Amp_12q15	0.317	1
USP17L2	ZFX	0.317	1
22q-Amp	9q-Del	0.317	1
8p-Amp	Del_14q23.3	0.317	1
CTNNA3	DMC1	0.318	1
CTNNA3	GML	0.318	1
CTNNB1	FLT1	0.318	1
CTNNB1	KEL	0.318	1
CTNNB1	Del_1p36.31	0.318	1
CTNNB1	Del_4q34.3	0.318	1
DMC1	Amp_3p13	0.318	1
EPHA7	KRTAP5-10	0.318	1
FLT1	MAP2K1	0.318	1
GML	9q-Del	0.318	1
GML	Amp_3p13	0.318	1
KEL	KYNU	0.318	1
KEL	MAP2K1	0.318	1
KRTAP5-10	MYO16	0.318	1
KRTAP5-10	SLC38A4	0.318	1
MYO16	ZNF780B	0.318	1
SELP	ZNF780B	0.318	1
SLC38A4	ZNF780B	0.318	1
Amp_5p15.33	Del_6q21	0.318	1
Amp_7p22.1	Del_5q31.3	0.318	1
Amp_12q14.1	Amp_17q25.3	0.318	1
Amp_12q14.1	Del_4p16.3	0.318	1
Del_3q13.31	Del_19p13.3	0.318	1
MPP7	TRERF1	0.319	1
PDGFRA	Del_4p16.3	0.319	1
Amp_17q25.3	Del_5p15.31	0.319	1
CBL	EZH2	0.32	1
CBL	GLI1	0.32	1
CBL	KIT	0.32	1
CBL	KRT73	0.32	1
CCNA1	NGF	0.32	1
COL3A1	9p-Del	0.32	1
CYP3A5	Del_9p23	0.32	1
GLI1	TTN	0.32	1
KIT	OR6C74	0.32	1
KIT	RB1	0.32	1
NGF	RIPK4	0.32	1
OR4S2	16q-Del	0.32	1
USP9X	16q-Del	0.32	1
20q-Amp	6q-Del	0.32	1
16q-Del	17p-Del	0.32	1
Del_6q26	Del_15q21.1	0.32	1
ATP5F1	Del_11q23.3	0.321	1
BRAF	TP63	0.321	1
EPHA4	Del_10q21.1	0.321	1
GNAQ	Del_11q23.3	0.321	1
MLL	Amp_6p24.3	0.321	1
MYO3B	Amp_20q13.33	0.321	1
PDGFRA	Del_9p23	0.321	1
20q-Amp	Del_10p15.3	0.321	1
ARID2	CBL	0.322	1
ARID2	OR6C74	0.322	1
ARID2	RQCD1	0.322	1
C15orf23	Amp_7p22.1	0.322	1
C7orf58	NGF	0.322	1
FRMPD4	Amp_6q12	0.322	1
GLI1	Del_9p21.3	0.322	1
HRAS	Del_6q21	0.322	1
KRAS	Amp_12q14.1	0.322	1
MAP2K1	TTN	0.322	1
MYO3B	PPP6C	0.322	1
MYO3B	Amp_6q12	0.322	1
USH2A	Del_19p13.3	0.322	1
13q-Amp	Amp_7p22.1	0.322	1
ALPK2	7q-Amp	0.323	1
KCND2	POTEG	0.323	1
SLC9A11	22q-Amp	0.323	1
TP63	Del_10q26.3	0.323	1
5q-Del	Amp_1p12	0.323	1
C15orf23	7q-Amp	0.324	1
DMC1	EPHA6	0.324	1
Amp_12q15	Del_6q21	0.324	1
CPA3	RPTN	0.325	1
DDX3X	RPTN	0.325	1
DMC1	KRTAP5-10	0.325	1
DMC1	MSTN	0.325	1
DMC1	ZNF780B	0.325	1
EPHA6	Del_4q34.3	0.325	1
GML	KRTAP5-10	0.325	1
POTEG	Amp_1q44	0.325	1
PPP6C	RPTN	0.325	1
PPP6C	Del_16q12.1	0.325	1
RAC1	RPTN	0.325	1
RAC1	Del_16q12.1	0.325	1
20p-Amp	Del_Xp21.1	0.325	1
20q-Amp	Amp_11q13.3	0.325	1
Amp_1q44	Del_2q37.3	0.325	1
Del_4q34.3	Del_8p23.3	0.325	1
Del_4q34.3	Del_15q21.1	0.325	1
C10orf54	RPTN	0.326	1
C7orf58	14q-Del	0.326	1
CCNA1	Del_12q23.3	0.326	1
CDK4	Del_14q23.3	0.326	1
CDK4	Del_16q12.1	0.326	1
CNTN5	9p-Del	0.326	1
GLI1	Del_12q23.3	0.326	1
KIT	Del_12q23.3	0.326	1
NUDT11	Del_16q12.1	0.326	1
PTPN11	Del_16q12.1	0.326	1
RIPK4	Del_12q23.3	0.326	1
Amp_1p12	Del_16q12.1	0.326	1
C10orf28	DSG3	0.327	1
C10orf28	11p-Del	0.327	1
C7orf58	Amp_8q24.21	0.327	1
CDKN2A	MLL	0.327	1
PPP6C	Del_6q21	0.327	1
PTEN	Del_6q21	0.327	1
Amp_1p12	Amp_12q15	0.327	1
Amp_4q12	Del_15q13.3	0.327	1
ACSBG1	APC	0.328	1
APC	CYP3A5	0.328	1
APC	IGF1R	0.328	1
APCS	TRERF1	0.328	1
CCK	XIRP2	0.328	1
CYP3A5	PTPN22	0.328	1
DMC1	Amp_7q34	0.328	1
FAM58A	XIRP2	0.328	1
KRAS	XIRP2	0.328	1
MAN1A1	Amp_8q24.21	0.328	1
MPP7	Amp_7q34	0.328	1
PTPN22	SYK	0.328	1
SELP	7q-Amp	0.328	1
SYK	8p-Amp	0.328	1
13q-Amp	Del_6q26	0.328	1
ANO4	Del_9p23	0.329	1
CDKN2A	NBPF1	0.329	1
CDKN2A	18p-Del	0.329	1
FLT1	HRAS	0.329	1
HRAS	KEL	0.329	1
HRAS	Del_1p36.31	0.329	1
HRAS	Del_4q34.3	0.329	1
9q-Del	Amp_22q13.2	0.329	1
CDK4	STK19	0.33	1
HSD11B1	PTPN11	0.33	1
HSD11B1	S100A8	0.33	1
OXA1L	STK19	0.33	1
PTPN11	STK19	0.33	1
S100A8	STK19	0.33	1
5q-Del	Amp_20q13.33	0.33	1
Amp_12q14.1	Amp_22q13.2	0.33	1
C10orf28	KYNU	0.331	1
C10orf28	MAP2K1	0.331	1
CYP3A4	USP9X	0.331	1
EPHA6	MAP2K1	0.331	1
GUCY2F	NRAS	0.331	1
KCND2	13q-Amp	0.331	1
NRAS	PARM1	0.331	1
PPP6C	USP9X	0.331	1
SLC27A5	16q-Del	0.331	1
USP9X	Amp_6q12	0.331	1
CCNA1	Del_6q26	0.332	1
CDC42BPA	Del_6q26	0.332	1
GML	KCND2	0.332	1
MSTN	11q-Del	0.332	1
EPHA7	Del_16q24.3	0.333	1
IGF1R	Del_10q23.31	0.333	1
SELP	Del_16q24.3	0.333	1
13q-Amp	Amp_12q14.1	0.333	1
13q-Amp	Del_16p13.3	0.333	1
ARID2	CTNNB1	0.334	1
BRAF	RELN	0.334	1
C7orf58	MAP2K1	0.334	1
CBL	NF1	0.334	1
CBL	Del_8p23.3	0.334	1
CBL	Del_15q21.1	0.334	1
COL3A1	Del_12q23.3	0.334	1
MYO16	6q-Del	0.334	1
NF1	OR6C74	0.334	1
NGF	Del_8p23.3	0.334	1
OR6C74	Del_8p23.3	0.334	1
OR6C74	Del_15q21.1	0.334	1
PTEN	16q-Del	0.334	1
RB1	Del_15q21.1	0.334	1
RQCD1	Del_15q21.1	0.334	1
Del_3q13.31	Del_9p23	0.334	1
Del_12q23.3	Del_Xp21.1	0.335	1
C10orf28	10p-Del	0.336	1
DCLK3	Amp_13q31.3	0.336	1
EMG1	10p-Del	0.336	1
KCND2	Del_4q34.3	0.336	1
MYO16	THSD7B	0.336	1
NBPF1	USP17L2	0.336	1
TP63	6p-Amp	0.336	1
ARID2	HRAS	0.337	1
ATP5F1	C15orf23	0.337	1
ATP5F1	GUCY2F	0.337	1
C15orf23	CCK	0.337	1
C15orf23	GNAQ	0.337	1
C7orf58	HRAS	0.337	1
CCK	13q-Amp	0.337	1
FAM58A	PARM1	0.337	1
IDH1	Del_5q31.3	0.337	1
KYNU	NRAS	0.337	1
RPTN	10q-Del	0.337	1
Amp_4q12	Del_5q31.3	0.337	1
Amp_12q15	Del_5q31.3	0.337	1
CYP3A4	Del_11q23.3	0.338	1
NUDT11	Del_16q23.1	0.338	1
RELN	20q-Amp	0.338	1
7q-Amp	Del_15q21.1	0.338	1
Amp_6q12	Del_11q23.3	0.338	1
USP9X	Amp_6p24.3	0.339	1
17p-Del	Del_12q23.3	0.339	1
17p-Del	Del_13q34	0.339	1
5q-Del	Del_1p22.1	0.339	1
ANO4	APCS	0.34	1
ANO4	IGF1R	0.34	1
EPHA7	16q-Del	0.34	1
SELP	16q-Del	0.34	1
Amp_1q21.3	Amp_5p15.33	0.34	1
APC	MYO16	0.341	1
APC	SLC38A4	0.341	1
APC	TPTE	0.341	1
C10orf54	9p-Del	0.341	1
MYO3B	11p-Del	0.341	1
POTEG	Amp_6p24.3	0.341	1
RELN	10q-Del	0.341	1
SELP	8p-Amp	0.341	1
TRERF1	7p-Amp	0.341	1
USP17L2	Del_15q13.3	0.341	1
6p-Amp	Del_9p23	0.341	1
Amp_6p24.3	Del_2q37.3	0.341	1
ACSBG1	NGF	0.342	1
ACSBG1	OR6C74	0.342	1
APCS	OR6C74	0.342	1
BRAF	CCK	0.342	1
CBL	CYP3A5	0.342	1
CCNA1	FRMPD4	0.342	1
CCNA1	MYO3B	0.342	1
CYP3A5	NGF	0.342	1
CYP3A5	OR6C74	0.342	1
FRMPD4	KIT	0.342	1
FRMPD4	KRT73	0.342	1
GLI1	8q-Amp	0.342	1
IGF1R	NGF	0.342	1
IGF1R	RQCD1	0.342	1
KIT	8q-Amp	0.342	1
MAN1A1	17p-Del	0.342	1
MLL	NUP214	0.342	1
NUDT11	6q-Del	0.342	1
PPP6C	Del_16q23.1	0.342	1
20q-Amp	Amp_12q15	0.342	1
BRAF	NBPF1	0.343	1
CAMTA1	STK19	0.344	1
CYP3A5	NRAS	0.344	1
EPHA6	Amp_20q13.33	0.344	1
EZH2	Amp_7p22.1	0.344	1
GLI1	Amp_7p22.1	0.344	1
HSD11B1	NAP1L2	0.344	1
NAP1L2	STK19	0.344	1
PTEN	STK19	0.344	1
DSG3	Amp_1q44	0.345	1
FAM58A	7q-Amp	0.345	1
GNAQ	7q-Amp	0.345	1
HRAS	Del_8p23.3	0.345	1
MSTN	5q-Del	0.345	1
NRAS	Del_6q21	0.345	1
POTEG	Amp_7p22.1	0.345	1
ACSBG1	NBPF1	0.346	1
APC	Del_9p21.3	0.346	1
APCS	FGFR2	0.346	1
APCS	NBPF1	0.346	1
CYP3A5	POTEG	0.346	1
FGFR2	IGF1R	0.346	1
IGF1R	NBPF1	0.346	1
IGF1R	18p-Del	0.346	1
KYNU	Del_10q26.3	0.346	1
NBPF1	Del_4p16.3	0.346	1
POTEG	Del_1p22.1	0.346	1
SELP	Del_9p23	0.346	1
TP53	Del_16p13.3	0.346	1
18p-Del	Del_4p16.3	0.346	1
Del_2q37.3	Del_4p16.3	0.346	1
Del_3q13.31	Del_4q34.3	0.346	1
C10orf28	8q-Amp	0.347	1
CBL	Del_15q13.3	0.347	1
COL3A1	Amp_22q13.2	0.347	1
CTNNB1	Amp_13q31.3	0.347	1
DMC1	MPP7	0.347	1
EMG1	Del_16q24.3	0.347	1
GML	MPP7	0.347	1
GML	Amp_17q25.3	0.347	1
GML	Del_1p22.1	0.347	1
KYNU	USP17L2	0.347	1
MAP2K1	USP17L2	0.347	1
MAP2K1	Amp_13q31.3	0.347	1
OR6C74	Del_15q13.3	0.347	1
RQCD1	Amp_1p12	0.347	1
RQCD1	Del_15q13.3	0.347	1
TP63	Del_12q23.3	0.347	1
20q-Amp	5q-Del	0.347	1
CNTN5	PTEN	0.348	1
EPHA7	11q-Del	0.348	1
MLL	Del_9p21.3	0.348	1
NRAS	Amp_8q24.21	0.348	1
CCNA1	MSTN	0.349	1
CDC42BPA	ZNF780B	0.349	1
EZH2	ZNF780B	0.349	1
GLI1	SLC27A5	0.349	1
KIT	SLC27A5	0.349	1
KIT	ZNF780B	0.349	1
KRT73	KRTAP5-10	0.349	1
OXA1L	6p-Amp	0.349	1
PTPN11	SLC9A11	0.349	1
RIPK4	ZNF780B	0.349	1
S100A8	6p-Amp	0.349	1
BTK	PTPN11	0.35	1
BTK	S100A8	0.35	1
C10orf54	NUP214	0.35	1
C10orf54	ZFX	0.35	1
C15orf23	MPP7	0.35	1
CDK4	NUP214	0.35	1
CDK4	Amp_4q12	0.35	1
CNTN5	6q-Del	0.35	1
GUCY2F	Del_4p16.3	0.35	1
MAN1A1	NUDT11	0.35	1
NUDT11	NUP214	0.35	1
NUP214	OXA1L	0.35	1
NUP214	S100A8	0.35	1
OXA1L	Amp_12q15	0.35	1
PARM1	Del_4p16.3	0.35	1
PTPN11	ZFX	0.35	1
SLC38A4	Del_6q21	0.35	1
SLC9A11	9p-Del	0.35	1
6p-Amp	9p-Del	0.35	1
ATP5F1	RAC1	0.351	1
C10orf54	9q-Del	0.351	1
C7orf58	Del_15q21.1	0.351	1
CCK	DDX3X	0.351	1
CCK	LGR6	0.351	1
CCK	PPP6C	0.351	1
CDK4	Amp_1q21.3	0.351	1
CNTN5	IGF1R	0.351	1
CTNNA3	FRMPD4	0.351	1
CYP3A4	KRAS	0.351	1
DDX3X	KRAS	0.351	1
DDX3X	XIRP2	0.351	1
DMC1	GML	0.351	1
FAM58A	LGR6	0.351	1
FAM58A	RAC1	0.351	1
FAM58A	Amp_6q12	0.351	1
GNAQ	LGR6	0.351	1
GNAQ	PPP6C	0.351	1
GNAQ	Amp_6q12	0.351	1
HRAS	Del_6q26	0.351	1
KCND2	10q-Del	0.351	1
KRAS	RAC1	0.351	1
KRAS	Amp_6q12	0.351	1
KYNU	Del_15q21.1	0.351	1
NUDT11	9q-Del	0.351	1
OXA1L	9q-Del	0.351	1
OXA1L	Amp_1q21.3	0.351	1
RB1	Del_11q23.3	0.351	1
S100A8	Amp_1q21.3	0.351	1
TPTE	Amp_13q31.3	0.351	1
Amp_1p12	Del_16q23.1	0.351	1
Amp_15q26.2	Del_8p23.3	0.351	1
Del_5q12.1	Del_15q21.1	0.351	1
BTK	9q-Del	0.352	1
MYO16	Amp_1q21.3	0.352	1
ATP5F1	11q-Del	0.353	1
CCK	COL3A1	0.353	1
COL3A1	KRAS	0.353	1
CYP3A4	Del_5q31.3	0.353	1
FRMPD4	Amp_7q34	0.353	1
MPP7	6p-Amp	0.353	1
MYO3B	7q-Amp	0.353	1
PPP6C	Del_5q31.3	0.353	1
6p-Amp	9q-Del	0.353	1
17p-Del	Del_16q12.1	0.353	1
Amp_5p15.33	Del_16q12.1	0.353	1
ACSBG1	Amp_22q13.2	0.354	1
ALPK2	APCS	0.354	1
ALPK2	IGF1R	0.354	1
CYP3A5	Amp_20q13.33	0.354	1
SYK	Amp_20q13.33	0.354	1
USP9X	Del_4q34.3	0.355	1
Amp_3p13	Del_Xp21.1	0.355	1
MYO3B	Del_6q26	0.356	1
13q-Amp	Del_10p15.3	0.356	1
Amp_17q25.3	Del_10q26.3	0.356	1
ANO4	Del_6q26	0.357	1
EPHA4	Del_10q23.31	0.357	1
PPP6C	Del_16p13.3	0.357	1
Amp_4q12	Del_3q13.31	0.357	1
Amp_12q15	Del_19p13.3	0.357	1
CDKN2A	MAN1A1	0.358	1
CDKN2A	ZFX	0.358	1
CDKN2A	6q-Del	0.358	1
CTNNA3	EZH2	0.358	1
CTNNA3	KIT	0.358	1
EPHA6	7q-Amp	0.358	1
GLI1	Amp_3p13	0.358	1
RIPK4	Amp_3p13	0.358	1
STK19	Amp_6p24.3	0.358	1
TPTE	5q-Del	0.358	1
C15orf23	PARM1	0.359	1
CBL	Amp_5p15.33	0.359	1
COL3A1	Del_8p23.3	0.359	1
HSD11B1	SLC9A11	0.359	1
KRTAP5-10	Del_4q34.3	0.359	1
MLL	RB1	0.359	1
NGF	20q-Amp	0.359	1
NGF	Amp_5p15.33	0.359	1
OR6C74	20q-Amp	0.359	1
SLC27A5	Del_1p36.31	0.359	1
SLC27A5	Del_4q34.3	0.359	1
SLC9A11	STK19	0.359	1
USP17L2	Del_13q34	0.359	1
ZNF780B	Del_4q34.3	0.359	1
5q-Del	Amp_7p22.1	0.359	1
BRAF	Del_6q26	0.36	1
CBL	XIRP2	0.36	1
DDX3X	6p-Amp	0.36	1
NUDT11	Amp_7q34	0.36	1
OR6C74	XIRP2	0.36	1
RAC1	6p-Amp	0.36	1
RB1	XIRP2	0.36	1
17p-Del	Amp_7q34	0.36	1
Amp_5p15.33	Amp_7q34	0.36	1
Amp_22q13.2	Del_4q34.3	0.36	1
ANO4	Del_6q21	0.361	1
BRAF	OXA1L	0.361	1
KYNU	Del_10p15.3	0.361	1
RPTN	Del_10q23.31	0.361	1
CCK	1q-Amp	0.362	1
CPA3	Del_9p23	0.362	1
DMC1	EPHA7	0.362	1
DMC1	SLC38A4	0.362	1
EPHA7	GML	0.362	1
FAM58A	1q-Amp	0.362	1
GML	MYO16	0.362	1
GNAQ	1q-Amp	0.362	1
7p-Amp	Amp_12q14.1	0.362	1
7p-Amp	Del_16p13.3	0.362	1
Amp_6q12	Del_9p23	0.362	1
Del_6q21	Del_16p13.3	0.362	1
ACSBG1	Del_6q21	0.363	1
APC	HSD11B1	0.363	1
BRAF	14q-Del	0.363	1
CDKN2A	Del_10p15.3	0.363	1
CYP3A5	Del_13q34	0.363	1
HSD11B1	OR6C74	0.363	1
HSD11B1	RQCD1	0.363	1
IGF1R	Del_6q21	0.363	1
IGF1R	Del_12q23.3	0.363	1
KEL	Del_4p16.3	0.363	1
NGF	STK19	0.363	1
OR6C74	STK19	0.363	1
PDGFRA	STK19	0.363	1
RQCD1	STK19	0.363	1
STK19	Del_5p15.31	0.363	1
SYK	Del_6q21	0.363	1
SYK	Del_13q34	0.363	1
13q-Amp	6q-Del	0.363	1
Amp_17q25.3	Del_1p36.31	0.363	1
COL3A1	Amp_4q12	0.364	1
DDX3X	10q-Del	0.364	1
MAN1A1	Amp_7q34	0.364	1
RELN	ZNF780B	0.364	1
11q-Del	Amp_4q12	0.364	1
Amp_1q44	Amp_11q13.3	0.364	1
Amp_4q12	Amp_7q34	0.364	1
ALPK2	Del_16q12.1	0.365	1
EMG1	Amp_12q14.1	0.365	1
EMG1	Del_9p23	0.365	1
EPHA7	5q-Del	0.365	1
KCND2	Del_Xp21.1	0.365	1
KRTAP5-10	Del_6q26	0.365	1
CCNA1	Amp_8q24.21	0.366	1
CDC42BPA	Amp_8q24.21	0.366	1
EPHA4	GNAQ	0.366	1
EPHA4	KRAS	0.366	1
FAM58A	6p-Del	0.366	1
GLI1	Amp_8q24.21	0.366	1
GNAQ	6p-Del	0.366	1
GNAQ	Amp_11q13.3	0.366	1
KIT	Amp_8q24.21	0.366	1
KRAS	6p-Del	0.366	1
KRAS	Amp_11q13.3	0.366	1
RPTN	16q-Del	0.366	1
Amp_1q21.3	Del_5q12.1	0.366	1
ARID2	Del_3q13.31	0.367	1
IGF1R	TP53	0.367	1
KYNU	Del_15q13.3	0.367	1
PDGFRA	Del_3q13.31	0.367	1
SYK	TP53	0.367	1
TP53	Amp_6p24.3	0.367	1
8p-Amp	Del_3q13.31	0.367	1
8p-Amp	Del_19p13.3	0.367	1
Del_3q13.31	Del_5q12.1	0.367	1
C10orf28	Del_10p15.3	0.368	1
CAMTA1	22q-Amp	0.368	1
CDKN2A	HRAS	0.368	1
CNTN5	Del_16q12.1	0.368	1
EPHA6	18p-Del	0.368	1
SELP	1q-Amp	0.368	1
TP53	Amp_20q13.33	0.368	1
CDK4	KYNU	0.369	1
CTNNB1	S100A8	0.369	1
EPHA7	Del_2q37.3	0.369	1
FRMPD4	20q-Amp	0.369	1
KCND2	Del_10q21.1	0.369	1
KYNU	OXA1L	0.369	1
KYNU	S100A8	0.369	1
KYNU	Del_10q23.31	0.369	1
MAP2K1	NUDT11	0.369	1
MAP2K1	PTPN11	0.369	1
MAP2K1	S100A8	0.369	1
NBPF1	SLC38A4	0.369	1
NUDT11	Amp_15q26.2	0.369	1
PPP6C	7q-Amp	0.369	1
SELP	18p-Del	0.369	1
SELP	Del_2q37.3	0.369	1
CCNA1	Del_11q23.3	0.37	1
DCLK3	Del_16q23.1	0.37	1
GUCY2F	SELP	0.37	1
MPP7	RELN	0.37	1
RELN	Del_10q21.1	0.37	1
SELP	13q-Amp	0.37	1
ALPK2	1q-Amp	0.371	1
RELN	Del_16q24.3	0.371	1
TTN	Amp_7p22.1	0.371	1
7q-Amp	Amp_1p12	0.371	1
ARID2	KRTAP5-10	0.372	1
MSTN	Del_5q12.1	0.372	1
OR4S2	Del_5q12.1	0.372	1
ZNF780B	14q-Del	0.372	1
ACSBG1	MSTN	0.373	1
ACSBG1	SLC27A5	0.373	1
APCS	MSTN	0.373	1
APCS	ZNF780B	0.373	1
CYP3A5	KRTAP5-10	0.373	1
CYP3A5	MSTN	0.373	1
CYP3A5	ZNF780B	0.373	1
EPHA6	11p-Del	0.373	1
SYK	ZNF780B	0.373	1
Amp_12q15	Del_16q12.1	0.373	1
Amp_17q25.3	Del_12q23.3	0.373	1
Del_4p16.3	Del_13q34	0.373	1
Del_10q21.1	Del_Xp21.1	0.373	1
GLI1	KCND2	0.374	1
HSD11B1	TPTE	0.374	1
KCND2	KIT	0.374	1
RELN	Del_10q26.3	0.374	1
6p-Amp	Amp_7q34	0.374	1
BRAF	KRTAP5-10	0.375	1
MLL	Del_1p36.31	0.375	1
MLL	Del_4q34.3	0.375	1
MPP7	Del_Xp21.1	0.375	1
20q-Amp	Del_1p36.31	0.375	1
Amp_8q24.21	Del_16q12.1	0.375	1
Amp_17q25.3	Del_Xp21.1	0.375	1
Del_1p22.1	Del_Xp21.1	0.375	1
Del_4p16.3	Del_Xp21.1	0.375	1
CNTN5	Del_6q21	0.376	1
EMG1	EPHA6	0.376	1
HRAS	RPTN	0.376	1
HRAS	Del_16q12.1	0.376	1
OR4S2	Amp_13q31.3	0.376	1
PARM1	Amp_1q21.3	0.376	1
USP9X	Amp_13q31.3	0.376	1
BTK	PTEN	0.377	1
CAMTA1	ZFX	0.377	1
CAMTA1	Amp_4q12	0.377	1
CCNA1	6q-Del	0.377	1
CDC42BPA	GML	0.377	1
DMC1	GLI1	0.377	1
DMC1	KRT73	0.377	1
DMC1	RIPK4	0.377	1
EZH2	GML	0.377	1
GLI1	GML	0.377	1
GLI1	6q-Del	0.377	1
GML	RIPK4	0.377	1
GNAQ	Del_10q26.3	0.377	1
IDH1	PTEN	0.377	1
KIT	6q-Del	0.377	1
KRT73	6q-Del	0.377	1
MAN1A1	1q-Amp	0.377	1
NUP214	22q-Amp	0.377	1
PTEN	ZFX	0.377	1
PTEN	Amp_12q15	0.377	1
ZFX	1q-Amp	0.377	1
22q-Amp	Amp_4q12	0.377	1
22q-Amp	Del_4q34.3	0.377	1
6p-Amp	7q-Amp	0.377	1
Amp_1p12	Amp_3p13	0.377	1
Amp_1p12	Del_5q12.1	0.377	1
DSG3	11q-Del	0.378	1
EPHA6	OR4S2	0.378	1
NBPF1	Amp_8q24.21	0.378	1
NF1	Amp_6p24.3	0.378	1
NF1	Del_8p23.3	0.378	1
POTEG	Amp_8q24.21	0.378	1
THSD7B	Del_9p23	0.378	1
17p-Del	Del_16q23.1	0.378	1
FAM58A	RELN	0.379	1
GNAQ	RELN	0.379	1
USH2A	Amp_13q31.3	0.379	1
ACSBG1	FRMPD4	0.38	1
APC	Amp_7q34	0.38	1
CCK	Amp_13q31.3	0.38	1
CYP3A5	FRMPD4	0.38	1
EPHA6	EZH2	0.38	1
FRMPD4	IGF1R	0.38	1
IGF1R	MYO3B	0.38	1
KYNU	9p-Del	0.38	1
20q-Amp	Del_16q24.3	0.38	1
9p-Del	Amp_15q26.2	0.38	1
Amp_11q13.3	Del_16q23.1	0.38	1
C10orf28	C15orf23	0.381	1
C10orf28	13q-Amp	0.381	1
CAMTA1	7q-Amp	0.381	1
CAMTA1	Amp_20q13.33	0.381	1
CAMTA1	Amp_22q13.2	0.381	1
EMG1	PARM1	0.381	1
EMG1	13q-Amp	0.381	1
FRMPD4	Amp_13q31.3	0.381	1
HSD11B1	POTEG	0.381	1
MYO3B	Amp_13q31.3	0.381	1
POTEG	STK19	0.381	1
PTEN	Amp_22q13.2	0.381	1
RPTN	Del_12q23.3	0.381	1
RPTN	Del_13q34	0.381	1
1q-Amp	Del_15q21.1	0.381	1
6p-Del	Amp_12q14.1	0.381	1
Amp_1q44	Del_14q23.3	0.381	1
Amp_5p15.33	Del_5q31.3	0.381	1
Del_13q34	Del_14q23.3	0.381	1
NUDT11	Amp_20q13.33	0.382	1
NUDT11	Amp_22q13.2	0.382	1
OXA1L	Amp_22q13.2	0.382	1
USH2A	13q-Amp	0.382	1
CPA3	Del_1p22.1	0.383	1
CTNNB1	20q-Amp	0.383	1
DDX3X	Del_1p22.1	0.383	1
DMC1	7q-Amp	0.383	1
FLT1	11p-Del	0.383	1
GML	7q-Amp	0.383	1
KYNU	MLL	0.383	1
KYNU	20q-Amp	0.383	1
LGR6	MPP7	0.383	1
MPP7	PPP6C	0.383	1
NBPF1	Del_6q26	0.383	1
POTEG	7p-Amp	0.383	1
SELP	6p-Amp	0.383	1
7p-Amp	Del_2q37.3	0.383	1
Amp_7p22.1	Del_3q13.31	0.383	1
Amp_12q15	Del_11q23.3	0.383	1
BTK	CBL	0.384	1
BTK	RQCD1	0.384	1
C15orf23	CPA3	0.384	1
C15orf23	CYP3A4	0.384	1
DDX3X	GUCY2F	0.384	1
GUCY2F	Amp_6q12	0.384	1
HRAS	TTN	0.384	1
IDH1	NGF	0.384	1
IDH1	RB1	0.384	1
IDH1	RQCD1	0.384	1
MAN1A1	OR6C74	0.384	1
MAN1A1	RB1	0.384	1
MAN1A1	RQCD1	0.384	1
NGF	ZFX	0.384	1
NGF	Amp_12q15	0.384	1
NUP214	OR6C74	0.384	1
NUP214	RQCD1	0.384	1
OR6C74	RPTN	0.384	1
OR6C74	ZFX	0.384	1
OR6C74	Amp_4q12	0.384	1
OR6C74	Amp_12q15	0.384	1
OR6C74	Del_16q12.1	0.384	1
PPP6C	13q-Amp	0.384	1
RB1	Del_14q23.3	0.384	1
RPTN	RQCD1	0.384	1
RQCD1	Amp_12q15	0.384	1
RQCD1	Del_16q12.1	0.384	1
13q-Amp	Amp_6q12	0.384	1
Amp_17q25.3	Del_10p15.3	0.384	1
BRAF	KRT73	0.385	1
CNTN5	Del_10p15.3	0.385	1
CTNNB1	Del_10q21.1	0.385	1
MSTN	TPTE	0.385	1
MSTN	7p-Amp	0.385	1
NRAS	RELN	0.385	1
USH2A	Amp_15q26.2	0.385	1
IGF1R	Del_10q21.1	0.386	1
MSTN	Del_8p23.3	0.386	1
NRAS	10p-Del	0.386	1
SLC27A5	Del_8p23.3	0.386	1
TTN	Del_9p23	0.386	1
ZNF780B	Del_8p23.3	0.386	1
6q-Del	Del_15q21.1	0.386	1
C10orf54	OR4S2	0.387	1
C7orf58	Del_4p16.3	0.387	1
CDK4	OR4S2	0.387	1
DSG3	PARM1	0.387	1
GUCY2F	TP53	0.387	1
KRTAP5-10	USH2A	0.387	1
MSTN	USH2A	0.387	1
OR4S2	OXA1L	0.387	1
OR4S2	PTPN11	0.387	1
OR4S2	S100A8	0.387	1
OXA1L	USP9X	0.387	1
PARM1	11p-Del	0.387	1
PTPN11	USP9X	0.387	1
SLC27A5	USH2A	0.387	1
13q-Amp	11p-Del	0.387	1
ANO4	STK19	0.388	1
CTNNB1	Del_3q13.31	0.389	1
KYNU	Del_9p21.3	0.389	1
OR4S2	Del_8p23.3	0.389	1
OR4S2	Del_15q21.1	0.389	1
RELN	14q-Del	0.389	1
USP9X	Del_8p23.3	0.389	1
Amp_6p24.3	Del_12q23.3	0.389	1
Amp_7p22.1	Del_12q23.3	0.389	1
Amp_15q26.2	Del_9p21.3	0.389	1
ALPK2	Del_5q12.1	0.39	1
CCNA1	Del_1p22.1	0.39	1
CDC42BPA	Del_4p16.3	0.39	1
EPHA7	Del_1p36.31	0.39	1
EZH2	MPP7	0.39	1
EZH2	Amp_17q25.3	0.39	1
GLI1	10q-Del	0.39	1
GLI1	Del_1p22.1	0.39	1
GLI1	Del_4p16.3	0.39	1
KIT	Del_1p22.1	0.39	1
KIT	Del_4p16.3	0.39	1
MPP7	RIPK4	0.39	1
MYO16	Del_1p36.31	0.39	1
NRAS	Amp_6q12	0.39	1
RIPK4	Amp_17q25.3	0.39	1
SELP	Del_1p36.31	0.39	1
SELP	Del_4q34.3	0.39	1
14q-Del	Amp_22q13.2	0.39	1
Amp_1q21.3	Del_9p21.3	0.39	1
Amp_20q13.33	Del_5q12.1	0.39	1
CDKN2A	FRMPD4	0.391	1
FRMPD4	1q-Amp	0.391	1
HRAS	SLC9A11	0.391	1
HRAS	6p-Amp	0.391	1
POTEG	6p-Amp	0.391	1
POTEG	Del_19p13.3	0.391	1
1q-Amp	Del_5q31.3	0.391	1
6p-Amp	18p-Del	0.391	1
ALPK2	Del_11q23.3	0.392	1
C10orf28	THSD7B	0.392	1
DCLK3	16q-Del	0.392	1
EMG1	THSD7B	0.392	1
FRMPD4	Del_10p15.3	0.392	1
POTEG	16q-Del	0.392	1
USH2A	Amp_7p22.1	0.392	1
Amp_22q13.2	Del_11q23.3	0.392	1
COL3A1	Del_15q13.3	0.393	1
NUDT11	TP53	0.393	1
PTPN22	22q-Amp	0.393	1
S100A8	TP53	0.393	1
S100A8	11p-Del	0.393	1
TRERF1	22q-Amp	0.393	1
1q-Amp	Del_16q23.1	0.393	1
Amp_20q13.33	Del_10q21.1	0.393	1
ANO4	PPP6C	0.394	1
CYP3A5	TP63	0.394	1
CYP3A5	Del_16q24.3	0.394	1
IGF1R	TP63	0.394	1
IGF1R	Del_16q24.3	0.394	1
KEL	Del_9p23	0.394	1
NGF	Amp_7p22.1	0.394	1
PTEN	Amp_1q44	0.394	1
SYK	Del_16q24.3	0.394	1
HSD11B1	MSTN	0.395	1
KRTAP5-10	STK19	0.395	1
MPP7	Amp_7p22.1	0.395	1
MSTN	STK19	0.395	1
NBPF1	6q-Del	0.395	1
OXA1L	Amp_1q44	0.395	1
S100A8	Amp_1q44	0.395	1
SLC27A5	STK19	0.395	1
TP53	11p-Del	0.395	1
TPTE	Del_1p36.31	0.395	1
XIRP2	Amp_12q15	0.395	1
CCK	7p-Amp	0.396	1
CTNNB1	Del_9p23	0.396	1
FAM58A	7p-Amp	0.396	1
GNAQ	TPTE	0.396	1
KRTAP5-10	THSD7B	0.396	1
RQCD1	Del_16q23.1	0.396	1
Amp_11q13.3	Del_6q21	0.396	1
ANO4	Amp_17q25.3	0.397	1
APC	ZFX	0.397	1
APC	Amp_4q12	0.397	1
APC	Amp_12q15	0.397	1
BTK	PTPN22	0.397	1
BTK	TRERF1	0.397	1
C10orf28	CPA3	0.397	1
C10orf28	CYP3A4	0.397	1
C10orf28	LGR6	0.397	1
C10orf28	PPP6C	0.397	1
CYP3A4	EMG1	0.397	1
CYP3A5	THSD7B	0.397	1
IDH1	PTPN22	0.397	1
IGF1R	THSD7B	0.397	1
MAN1A1	8p-Amp	0.397	1
MYO16	Del_12q23.3	0.397	1
NUP214	PDGFRA	0.397	1
PDGFRA	ZFX	0.397	1
PDGFRA	Amp_12q15	0.397	1
PTPN22	ZFX	0.397	1
SELP	Del_12q23.3	0.397	1
TRERF1	ZFX	0.397	1
ZFX	Del_5p15.31	0.397	1
8p-Amp	Amp_4q12	0.397	1
CTNNA3	IGF1R	0.398	1
CYP3A5	Amp_3p13	0.398	1
5q-Del	Amp_8q24.21	0.398	1
BRAF	KYNU	0.399	1
CAMTA1	11q-Del	0.399	1
KRTAP5-10	Amp_1p12	0.399	1
RIPK4	Amp_7q34	0.399	1
BRAF	Del_10p15.3	0.4	1
CAMTA1	11p-Del	0.4	1
CDKN2A	CTNNB1	0.4	1
CDKN2A	MAP2K1	0.4	1
CDKN2A	Del_1p36.31	0.4	1
CPA3	1q-Amp	0.4	1
DDX3X	1q-Amp	0.4	1
KYNU	6q-Del	0.4	1
PTEN	TP53	0.4	1
STK19	Del_12q23.3	0.4	1
TP63	Del_19p13.3	0.4	1
20q-Amp	Amp_3p13	0.4	1
Amp_1q44	Del_15q13.3	0.4	1
FRMPD4	Del_4p16.3	0.401	1
ALPK2	HSD11B1	0.402	1
APCS	DMC1	0.402	1
CYP3A5	GML	0.402	1
DMC1	IGF1R	0.402	1
GML	SYK	0.402	1
NRAS	OR4S2	0.402	1
PPP6C	Del_6q26	0.402	1
CPA3	SLC38A4	0.403	1
DDX3X	EPHA7	0.403	1
DDX3X	SELP	0.403	1
KYNU	Del_6q21	0.403	1
LGR6	SELP	0.403	1
MYO16	PPP6C	0.403	1
MYO16	RAC1	0.403	1
MYO16	Amp_6q12	0.403	1
RAC1	Amp_8q24.21	0.403	1
17p-Del	Amp_7p22.1	0.403	1
Amp_3p13	Amp_13q31.3	0.403	1
Amp_5p15.33	Del_5q12.1	0.403	1
CDC42BPA	EZH2	0.404	1
CDK4	Amp_6p24.3	0.404	1
CTNNB1	RQCD1	0.404	1
GLI1	RIPK4	0.404	1
IDH1	RELN	0.404	1
KIT	KRT73	0.404	1
KYNU	NGF	0.404	1
KYNU	OR6C74	0.404	1
MAP2K1	NGF	0.404	1
MLL	6p-Amp	0.404	1
NF1	Del_15q13.3	0.404	1
NGF	Amp_15q26.2	0.404	1
OXA1L	Amp_6p24.3	0.404	1
RELN	ZFX	0.404	1
TPTE	10p-Del	0.404	1
ZFX	6p-Amp	0.404	1
1q-Amp	16q-Del	0.404	1
6p-Amp	17p-Del	0.404	1
6p-Amp	Amp_4q12	0.404	1
7q-Amp	17p-Del	0.404	1
7q-Amp	Amp_5p15.33	0.404	1
CDK4	Del_16p13.3	0.405	1
Amp_12q14.1	Amp_13q31.3	0.405	1
Amp_13q31.3	Del_16p13.3	0.405	1
CCNA1	MYO16	0.406	1
CCNA1	SELP	0.406	1
EZH2	MYO16	0.406	1
EZH2	SLC38A4	0.406	1
GML	1q-Amp	0.406	1
GML	Del_4q34.3	0.406	1
PTEN	Del_9p23	0.406	1
RELN	Del_14q23.3	0.406	1
RIPK4	SLC38A4	0.406	1
CCK	Del_3q13.31	0.407	1
GNAQ	Del_19p13.3	0.407	1
HRAS	Del_9p23	0.407	1
KCND2	6q-Del	0.407	1
KCND2	Del_15q13.3	0.407	1
OR4S2	Del_15q13.3	0.407	1
RPTN	Del_16q12.1	0.407	1
Amp_1q21.3	Del_15q21.1	0.407	1
C15orf23	EPHA4	0.408	1
CBL	6p-Amp	0.408	1
CTNNA3	NRAS	0.408	1
EPHA4	GUCY2F	0.408	1
KEL	Del_5p15.31	0.408	1
PDGFRA	Del_1p36.31	0.408	1
PTPN22	Del_1p36.31	0.408	1
PTPN22	Del_4q34.3	0.408	1
RB1	6p-Amp	0.408	1
USH2A	Del_8p23.3	0.408	1
Amp_1p12	Del_3q13.31	0.408	1
C15orf23	5q-Del	0.409	1
CNTN5	Del_10q23.31	0.409	1
7p-Amp	Amp_17q25.3	0.409	1
Del_11q23.3	Del_Xp21.1	0.409	1
APCS	Amp_7p22.1	0.41	1
CAMTA1	CTNNB1	0.41	1
CTNNB1	22q-Amp	0.41	1
CYP3A5	Amp_7p22.1	0.41	1
DDX3X	PPP6C	0.41	1
EPHA6	9q-Del	0.41	1
MAP2K1	22q-Amp	0.41	1
NAP1L2	Amp_15q26.2	0.41	1
PPP6C	RAC1	0.41	1
Del_5q12.1	Del_16p13.3	0.41	1
CDKN2A	8q-Amp	0.411	1
CNTN5	STK19	0.411	1
CNTN5	Amp_1p12	0.411	1
COL3A1	Amp_3p13	0.411	1
ALPK2	PPP6C	0.412	1
CYP3A4	Amp_22q13.2	0.412	1
DDX3X	Amp_22q13.2	0.412	1
FAM58A	Del_6q21	0.412	1
GNAQ	Del_6q21	0.412	1
MAN1A1	Amp_1q44	0.412	1
MLL	SLC27A5	0.412	1
MLL	9p-Del	0.412	1
MPP7	Del_8p23.3	0.412	1
MSTN	17p-Del	0.412	1
NBPF1	Amp_1q21.3	0.412	1
NF1	Del_4p16.3	0.412	1
PPP6C	Amp_22q13.2	0.412	1
RAC1	Amp_20q13.33	0.412	1
RAC1	Amp_22q13.2	0.412	1
SLC27A5	20q-Amp	0.412	1
SLC27A5	17p-Del	0.412	1
ZNF780B	20q-Amp	0.412	1
ZNF780B	Amp_5p15.33	0.412	1
Amp_1q44	Amp_4q12	0.412	1
Amp_6q12	Amp_20q13.33	0.412	1
Amp_6q12	Amp_22q13.2	0.412	1
Amp_17q25.3	Del_15q21.1	0.412	1
ALPK2	HRAS	0.413	1
C10orf28	EPHA4	0.413	1
EMG1	EPHA4	0.413	1
FRMPD4	Del_16q12.1	0.413	1
GUCY2F	7p-Amp	0.413	1
13q-Amp	7p-Amp	0.413	1
16q-Del	Amp_7q34	0.413	1
Del_4q34.3	Del_Xp21.1	0.413	1
C10orf54	TP63	0.414	1
CDK4	8q-Amp	0.414	1
CDKN2A	Del_5q31.3	0.414	1
NUDT11	Del_16q24.3	0.414	1
OR6C74	Amp_8q24.21	0.414	1
7q-Amp	6p-Del	0.414	1
C10orf28	Del_5q31.3	0.415	1
CYP3A5	KCND2	0.415	1
EPHA4	Del_1p22.1	0.415	1
EPHA4	Del_4p16.3	0.415	1
IGF1R	KCND2	0.415	1
KCND2	SYK	0.415	1
NRAS	STK19	0.415	1
THSD7B	Amp_20q13.33	0.415	1
6p-Del	Del_4p16.3	0.415	1
Amp_11q13.3	Del_4p16.3	0.415	1
Del_3q13.31	Del_13q34	0.415	1
C7orf58	SLC38A4	0.416	1
COL3A1	KYNU	0.416	1
COL3A1	Amp_15q26.2	0.416	1
CTNNB1	11q-Del	0.416	1
CTNNB1	Del_16q12.1	0.416	1
MAP2K1	RPTN	0.416	1
POTEG	5q-Del	0.416	1
RPTN	Amp_15q26.2	0.416	1
SELP	Del_5q12.1	0.416	1
20p-Amp	5q-Del	0.416	1
11q-Del	Amp_15q26.2	0.416	1
BTK	POTEG	0.417	1
BTK	SLC27A5	0.417	1
BTK	18p-Del	0.417	1
CNTN5	KRTAP5-10	0.417	1
CNTN5	SLC27A5	0.417	1
DCLK3	Amp_12q15	0.417	1
DSG3	HSD11B1	0.417	1
FGFR2	ZFX	0.417	1
IDH1	POTEG	0.417	1
KRTAP5-10	Amp_4q12	0.417	1
MSTN	NUP214	0.417	1
MSTN	Amp_4q12	0.417	1
NBPF1	ZFX	0.417	1
NUP214	POTEG	0.417	1
PDGFRA	Amp_20q13.33	0.417	1
POTEG	ZFX	0.417	1
PPP6C	Del_10p15.3	0.417	1
PTPN22	Amp_22q13.2	0.417	1
SLC27A5	ZFX	0.417	1
SLC27A5	Amp_4q12	0.417	1
SLC27A5	Amp_12q15	0.417	1
ZFX	ZNF780B	0.417	1
20p-Amp	Amp_12q15	0.417	1
22q-Amp	Del_10q26.3	0.417	1
Amp_6p24.3	Del_4p16.3	0.417	1
Amp_12q14.1	Del_9p21.3	0.417	1
Amp_12q15	Del_2q37.3	0.417	1
Amp_20q13.33	Del_5p15.31	0.417	1
Amp_22q13.2	Del_5p15.31	0.417	1
CAMTA1	20p-Amp	0.418	1
FRMPD4	HSD11B1	0.418	1
NAP1L2	18p-Del	0.418	1
PTEN	Del_2q37.3	0.418	1
ALPK2	Del_4p16.3	0.419	1
APC	PTPN22	0.419	1
APC	TRERF1	0.419	1
CNTN5	Del_6q26	0.419	1
MPP7	Amp_20q13.33	0.419	1
PTPN22	TRERF1	0.419	1
PTPN22	8p-Amp	0.419	1
RPTN	Del_6q21	0.419	1
8p-Amp	Del_5p15.31	0.419	1
Amp_17q25.3	Amp_20q13.33	0.419	1
DSG3	HRAS	0.42	1
MLL	NRAS	0.42	1
TP63	Amp_1q44	0.42	1
Amp_1q44	Del_16q24.3	0.42	1
ARID2	GML	0.421	1
ATP5F1	NAP1L2	0.421	1
ATP5F1	22q-Amp	0.421	1
C7orf58	DMC1	0.421	1
CAMTA1	KRAS	0.421	1
CCK	CNTN5	0.421	1
CCK	22q-Amp	0.421	1
CCNA1	16q-Del	0.421	1
EPHA4	10p-Del	0.421	1
EZH2	16q-Del	0.421	1
FAM58A	PTEN	0.421	1
FGFR2	NRAS	0.421	1
GLI1	16q-Del	0.421	1
GNAQ	NAP1L2	0.421	1
GNAQ	PTEN	0.421	1
GNAQ	22q-Amp	0.421	1
GUCY2F	Del_16q24.3	0.421	1
KRAS	NAP1L2	0.421	1
KRAS	PTEN	0.421	1
OR4S2	Del_10q26.3	0.421	1
PARM1	Del_16q24.3	0.421	1
RELN	Amp_20q13.33	0.421	1
Amp_20q13.33	Del_15q21.1	0.421	1
APC	7q-Amp	0.422	1
C10orf54	GUCY2F	0.422	1
C15orf23	OXA1L	0.422	1
C7orf58	Del_Xp21.1	0.422	1
CDK4	PARM1	0.422	1
GUCY2F	OXA1L	0.422	1
NUDT11	13q-Amp	0.422	1
PTPN11	13q-Amp	0.422	1
10q-Del	Del_Xp21.1	0.422	1
14q-Del	Del_Xp21.1	0.422	1
Amp_1q44	Del_4q34.3	0.422	1
C10orf28	7q-Amp	0.424	1
CBL	6q-Del	0.424	1
CPA3	16q-Del	0.424	1
MLL	OR4S2	0.424	1
NGF	OR4S2	0.424	1
OR4S2	RQCD1	0.424	1
RAC1	16q-Del	0.424	1
RB1	6q-Del	0.424	1
SLC9A11	Del_12q23.3	0.424	1
ACSBG1	Del_6q26	0.425	1
CDKN2A	SLC27A5	0.425	1
FLT1	Del_11q23.3	0.425	1
FRMPD4	Del_10q21.1	0.425	1
IGF1R	Del_6q26	0.425	1
KCND2	Amp_13q31.3	0.425	1
RELN	Del_8p23.3	0.425	1
RELN	Del_15q21.1	0.425	1
SYK	Del_6q26	0.425	1
Amp_6p24.3	Amp_12q15	0.425	1
ANO4	Amp_1p12	0.426	1
BRAF	Del_4p16.3	0.426	1
CTNNB1	Amp_7q34	0.426	1
NRAS	Del_6q26	0.426	1
11q-Del	Amp_5p15.33	0.427	1
ARID2	CDKN2A	0.428	1
C10orf28	USP17L2	0.428	1
C10orf28	Amp_13q31.3	0.428	1
CTNNA3	Amp_17q25.3	0.428	1
CTNNA3	Del_4p16.3	0.428	1
EMG1	USP17L2	0.428	1
EMG1	Amp_13q31.3	0.428	1
Amp_3p13	Del_1p22.1	0.428	1
Amp_5p15.33	Del_6q26	0.428	1
Amp_12q14.1	Del_8p23.3	0.428	1
BRAF	Del_1p36.31	0.429	1
CYP3A4	11p-Del	0.429	1
DSG3	PPP6C	0.429	1
DSG3	RAC1	0.429	1
EPHA4	10q-Del	0.429	1
KCND2	7q-Amp	0.429	1
PPP6C	11p-Del	0.429	1
RAC1	11p-Del	0.429	1
Amp_7q34	Del_2q37.3	0.429	1
ACSBG1	EZH2	0.43	1
ACSBG1	KIT	0.43	1
APC	CTNNB1	0.43	1
APC	MAP2K1	0.43	1
APC	Amp_15q26.2	0.43	1
APC	Del_5q12.1	0.43	1
APCS	CDC42BPA	0.43	1
APCS	GLI1	0.43	1
APCS	KRT73	0.43	1
C7orf58	Del_5p15.31	0.43	1
CCNA1	CYP3A5	0.43	1
CCNA1	IGF1R	0.43	1
CCNA1	SYK	0.43	1
CDC42BPA	CYP3A5	0.43	1
CDC42BPA	Del_5q31.3	0.43	1
CTNNB1	PTPN22	0.43	1
CYP3A5	KRT73	0.43	1
CYP3A5	RIPK4	0.43	1
EZH2	IGF1R	0.43	1
IGF1R	KRT73	0.43	1
KEL	Del_16q24.3	0.43	1
KIT	Del_5q31.3	0.43	1
KYNU	Del_5p15.31	0.43	1
MAP2K1	PTPN22	0.43	1
NF1	17p-Del	0.43	1
PDGFRA	Amp_15q26.2	0.43	1
PTPN22	Amp_15q26.2	0.43	1
RIPK4	SYK	0.43	1
RIPK4	Del_5q31.3	0.43	1
8p-Amp	14q-Del	0.43	1
ACSBG1	MPP7	0.431	1
ACSBG1	Del_4p16.3	0.431	1
APCS	Amp_17q25.3	0.431	1
EPHA6	16q-Del	0.431	1
IDH1	TPTE	0.431	1
NAP1L2	Amp_7p22.1	0.431	1
SYK	Amp_17q25.3	0.431	1
SYK	Del_1p22.1	0.431	1
ANO4	CBL	0.432	1
ANO4	RB1	0.432	1
ANO4	RQCD1	0.432	1
ARID2	7p-Amp	0.432	1
C10orf28	Del_11q23.3	0.432	1
DDX3X	9q-Del	0.432	1
EMG1	Del_11q23.3	0.432	1
LGR6	9q-Del	0.432	1
PPP6C	9q-Del	0.432	1
PPP6C	Amp_1q21.3	0.432	1
Amp_8q24.21	Amp_17q25.3	0.432	1
Del_8p23.3	Del_Xp21.1	0.432	1
Del_15q21.1	Del_Xp21.1	0.432	1
CTNNB1	Del_16q23.1	0.433	1
CYP3A5	Amp_8q24.21	0.433	1
KYNU	Del_16q23.1	0.433	1
SELP	Del_10p15.3	0.433	1
Amp_22q13.2	Del_10q26.3	0.433	1
APC	CCK	0.434	1
APC	GNAQ	0.434	1
APC	KRAS	0.434	1
ATP5F1	PTPN22	0.434	1
BRAF	Del_14q23.3	0.434	1
C10orf28	COL3A1	0.434	1
CBL	Amp_1q21.3	0.434	1
CCK	PDGFRA	0.434	1
CCK	TRERF1	0.434	1
CCK	8p-Amp	0.434	1
CCK	Del_5p15.31	0.434	1
DSG3	10p-Del	0.434	1
FAM58A	PDGFRA	0.434	1
GNAQ	PTPN22	0.434	1
GNAQ	TRERF1	0.434	1
HRAS	8q-Amp	0.434	1
KRAS	PDGFRA	0.434	1
KRAS	TRERF1	0.434	1
KRAS	8p-Amp	0.434	1
NGF	9q-Del	0.434	1
NRAS	Del_3q13.31	0.434	1
RELN	6q-Del	0.434	1
RPTN	Del_16q23.1	0.434	1
TP53	10p-Del	0.434	1
BRAF	SLC9A11	0.435	1
CPA3	6p-Del	0.435	1
CPA3	Amp_11q13.3	0.435	1
EPHA4	Amp_6q12	0.435	1
NBPF1	Del_9p21.3	0.435	1
TP53	Del_10q21.1	0.435	1
20p-Amp	Del_9p21.3	0.435	1
6p-Del	Amp_6q12	0.435	1
Amp_12q14.1	Del_6q26	0.435	1
CTNNA3	HSD11B1	0.436	1
MAN1A1	Del_13q34	0.436	1
MYO3B	Del_16q23.1	0.436	1
PARM1	Del_6q21	0.436	1
Amp_4q12	Del_13q34	0.436	1
Amp_12q15	Del_13q34	0.436	1
Amp_17q25.3	Del_15q13.3	0.436	1
CCNA1	5q-Del	0.437	1
DSG3	8p-Amp	0.437	1
EPHA4	MYO16	0.437	1
KIT	5q-Del	0.437	1
MYO16	Amp_7p22.1	0.437	1
MYO16	Amp_11q13.3	0.437	1
CAMTA1	Del_16q24.3	0.438	1
CCNA1	Del_9p23	0.438	1
COL3A1	Del_9p21.3	0.438	1
CTNNB1	KRTAP5-10	0.438	1
CTNNB1	SLC27A5	0.438	1
KRTAP5-10	MAP2K1	0.438	1
KYNU	SLC27A5	0.438	1
MAP2K1	MSTN	0.438	1
NAP1L2	Del_16q24.3	0.438	1
OR4S2	Del_5q31.3	0.438	1
STK19	Del_10p15.3	0.438	1
ARID2	Amp_7p22.1	0.439	1
CNTN5	6p-Amp	0.439	1
DCLK3	Del_4q34.3	0.439	1
KRTAP5-10	RPTN	0.439	1
KRTAP5-10	Del_16q12.1	0.439	1
MSTN	RPTN	0.439	1
NBPF1	Del_1p36.31	0.439	1
NBPF1	Del_4q34.3	0.439	1
POTEG	Del_1p36.31	0.439	1
POTEG	Del_4q34.3	0.439	1
SLC27A5	Del_16q12.1	0.439	1
ZNF780B	Del_14q23.3	0.439	1
ZNF780B	Del_16q12.1	0.439	1
20p-Amp	Del_1p36.31	0.439	1
Del_2q37.3	Del_4q34.3	0.439	1
C10orf54	CPA3	0.44	1
C10orf54	LGR6	0.44	1
C10orf54	RAC1	0.44	1
CDK4	CYP3A4	0.44	1
CDK4	LGR6	0.44	1
CPA3	OXA1L	0.44	1
CYP3A4	OXA1L	0.44	1
CYP3A4	PTPN11	0.44	1
CYP3A4	S100A8	0.44	1
LGR6	PTPN11	0.44	1
NUDT11	PPP6C	0.44	1
NUDT11	RAC1	0.44	1
OXA1L	PPP6C	0.44	1
OXA1L	Amp_6q12	0.44	1
CAMTA1	Del_15q13.3	0.441	1
CDKN2A	OR4S2	0.441	1
MYO16	Del_15q21.1	0.441	1
RPTN	8q-Amp	0.441	1
RPTN	Del_16q24.3	0.441	1
22q-Amp	Amp_1p12	0.441	1
Del_15q13.3	Del_Xp21.1	0.441	1
DSG3	Amp_17q25.3	0.442	1
NAP1L2	USP9X	0.442	1
OR4S2	PTEN	0.442	1
USP9X	22q-Amp	0.442	1
CBL	Amp_12q14.1	0.443	1
DDX3X	Del_10q26.3	0.443	1
EMG1	1q-Amp	0.443	1
EZH2	7q-Amp	0.443	1
EZH2	Amp_1q44	0.443	1
KRT73	Amp_1q44	0.443	1
NGF	Amp_7q34	0.443	1
NGF	Amp_12q14.1	0.443	1
OR6C74	Amp_7q34	0.443	1
OR6C74	Amp_12q14.1	0.443	1
OR6C74	Del_16p13.3	0.443	1
RQCD1	Amp_7q34	0.443	1
RQCD1	Del_16p13.3	0.443	1
TPTE	Del_19p13.3	0.443	1
7p-Amp	Del_3q13.31	0.443	1
Amp_1q44	Amp_5p15.33	0.443	1
Amp_3p13	Del_10p15.3	0.443	1
Amp_6p24.3	Del_16q23.1	0.443	1
ALPK2	CBL	0.444	1
ALPK2	RB1	0.444	1
ARID2	16q-Del	0.444	1
CPA3	5q-Del	0.444	1
CYP3A4	5q-Del	0.444	1
MSTN	Del_11q23.3	0.444	1
NBPF1	Del_5q31.3	0.444	1
NGF	Amp_20q13.33	0.444	1
NGF	Amp_22q13.2	0.444	1
OR6C74	Amp_20q13.33	0.444	1
RB1	Amp_20q13.33	0.444	1
RQCD1	Amp_22q13.2	0.444	1
APCS	6q-Del	0.445	1
CYP3A5	6q-Del	0.445	1
FGFR2	8p-Amp	0.445	1
IGF1R	6q-Del	0.445	1
NBPF1	8p-Amp	0.445	1
NRAS	16q-Del	0.445	1
PDGFRA	POTEG	0.445	1
PDGFRA	20p-Amp	0.445	1
PPP6C	Del_10q21.1	0.445	1
TPTE	Amp_6p24.3	0.445	1
TPTE	Del_9p23	0.445	1
USH2A	7p-Amp	0.445	1
8p-Amp	18p-Del	0.445	1
18p-Del	Del_5p15.31	0.445	1
Del_2q37.3	Del_5p15.31	0.445	1
C15orf23	Amp_1q44	0.446	1
Amp_1p12	Del_16p13.3	0.446	1
Amp_1q44	Del_5p15.31	0.446	1
ATP5F1	NBPF1	0.447	1
ATP5F1	20p-Amp	0.447	1
ATP5F1	18p-Del	0.447	1
CCK	NBPF1	0.447	1
DCLK3	FAM58A	0.447	1
DCLK3	GNAQ	0.447	1
FAM58A	NBPF1	0.447	1
KRAS	NBPF1	0.447	1
KRAS	Del_2q37.3	0.447	1
PARM1	Del_5q12.1	0.447	1
RPTN	Del_5q31.3	0.447	1
USP17L2	Del_4p16.3	0.447	1
13q-Amp	14q-Del	0.447	1
1q-Amp	Amp_11q13.3	0.447	1
Amp_1q21.3	Del_19p13.3	0.447	1
Amp_13q31.3	Del_1p22.1	0.447	1
Amp_22q13.2	Del_5q31.3	0.447	1
APCS	EPHA7	0.448	1
BTK	DMC1	0.448	1
BTK	GML	0.448	1
C10orf28	10q-Del	0.448	1
CYP3A5	SELP	0.448	1
DMC1	IDH1	0.448	1
DMC1	MAN1A1	0.448	1
DMC1	NUP214	0.448	1
EMG1	10q-Del	0.448	1
GML	ZFX	0.448	1
GML	Amp_4q12	0.448	1
IGF1R	SLC38A4	0.448	1
SLC9A11	11p-Del	0.448	1
TTN	Amp_7q34	0.448	1
CDK4	NRAS	0.449	1
CDKN2A	Del_19p13.3	0.449	1
CTNNB1	6p-Amp	0.449	1
MAP2K1	SLC9A11	0.449	1
NRAS	Amp_11q13.3	0.449	1
ALPK2	IDH1	0.45	1
ALPK2	ZFX	0.45	1
CYP3A5	Del_9p21.3	0.45	1
KEL	Del_16q23.1	0.45	1
20q-Amp	Del_Xp21.1	0.45	1
17p-Del	Del_Xp21.1	0.45	1
Amp_5p15.33	Del_Xp21.1	0.45	1
Amp_12q14.1	Del_3q13.31	0.45	1
Amp_12q15	Amp_20q13.33	0.45	1
CTNNB1	DCLK3	0.451	1
CTNNB1	POTEG	0.451	1
CTNNB1	Del_2q37.3	0.451	1
KCND2	Del_10q26.3	0.451	1
KYNU	20p-Amp	0.451	1
KYNU	Del_2q37.3	0.451	1
NBPF1	Amp_15q26.2	0.451	1
NRAS	SLC9A11	0.451	1
18p-Del	Amp_15q26.2	0.451	1
Amp_22q13.2	Del_15q13.3	0.451	1
EZH2	Del_1p36.31	0.452	1
EZH2	Del_4q34.3	0.452	1
GLI1	Del_4q34.3	0.452	1
GLI1	Del_10q26.3	0.452	1
KIT	Del_1p36.31	0.452	1
KRT73	Del_4q34.3	0.452	1
MYO16	Amp_22q13.2	0.452	1
NBPF1	Del_6q21	0.452	1
NF1	8p-Amp	0.452	1
RIPK4	Del_4q34.3	0.452	1
RIPK4	Del_10q26.3	0.452	1
RPTN	7p-Amp	0.452	1
SLC27A5	Del_16q23.1	0.452	1
TRERF1	Del_15q21.1	0.452	1
ZNF780B	Del_16q23.1	0.452	1
6p-Del	Amp_20q13.33	0.452	1
Amp_11q13.3	Amp_20q13.33	0.452	1
Amp_11q13.3	Amp_22q13.2	0.452	1
Del_5p15.31	Del_8p23.3	0.452	1
Amp_22q13.2	Del_2q37.3	0.453	1
C7orf58	Del_16q12.1	0.454	1
CCNA1	HSD11B1	0.454	1
CDC42BPA	HSD11B1	0.454	1
EZH2	HSD11B1	0.454	1
EZH2	STK19	0.454	1
GLI1	HSD11B1	0.454	1
GLI1	STK19	0.454	1
HSD11B1	KCND2	0.454	1
HSD11B1	KRT73	0.454	1
HSD11B1	RIPK4	0.454	1
RELN	10p-Del	0.454	1
SLC38A4	Amp_3p13	0.454	1
1q-Amp	Del_10q23.31	0.454	1
CBL	DSG3	0.455	1
CBL	TP53	0.455	1
DSG3	NGF	0.455	1
FRMPD4	ZFX	0.455	1
FRMPD4	Amp_12q15	0.455	1
KCND2	Amp_17q25.3	0.455	1
RB1	TP53	0.455	1
RPTN	Del_10q26.3	0.455	1
RQCD1	TP53	0.455	1
RQCD1	11p-Del	0.455	1
ACSBG1	SYK	0.456	1
ANO4	17p-Del	0.456	1
APCS	IGF1R	0.456	1
APCS	SYK	0.456	1
CDK4	Amp_11q13.3	0.456	1
CYP3A5	IGF1R	0.456	1
CYP3A5	SYK	0.456	1
EPHA4	S100A8	0.456	1
FAM58A	Del_6q26	0.456	1
FLT1	11q-Del	0.456	1
GNAQ	Del_6q26	0.456	1
NUDT11	6p-Del	0.456	1
NUDT11	Amp_11q13.3	0.456	1
S100A8	Amp_11q13.3	0.456	1
6p-Del	Amp_8q24.21	0.456	1
C10orf28	Del_3q13.31	0.457	1
CYP3A5	Amp_1q21.3	0.457	1
EMG1	Del_3q13.31	0.457	1
EMG1	Del_19p13.3	0.457	1
EPHA4	16q-Del	0.457	1
IGF1R	9q-Del	0.457	1
SYK	9q-Del	0.457	1
SYK	Amp_1q21.3	0.457	1
5q-Del	Amp_7q34	0.457	1
Amp_1q21.3	Amp_7q34	0.457	1
Amp_1q21.3	Del_16q23.1	0.457	1
CTNNB1	RELN	0.458	1
MYO3B	6p-Amp	0.458	1
OR4S2	9p-Del	0.458	1
OR4S2	Del_16q12.1	0.458	1
USP9X	Del_16q12.1	0.458	1
20q-Amp	Del_15q13.3	0.458	1
17p-Del	Del_15q13.3	0.458	1
APC	1q-Amp	0.459	1
ATP5F1	Del_13q34	0.459	1
FAM58A	Del_13q34	0.459	1
FLT1	6q-Del	0.459	1
GNAQ	Del_12q23.3	0.459	1
Del_10q26.3	Del_Xp21.1	0.459	1
C15orf23	Amp_6p24.3	0.46	1
CPA3	Amp_13q31.3	0.46	1
PARM1	Amp_6p24.3	0.46	1
PPP6C	USP17L2	0.46	1
PPP6C	Amp_13q31.3	0.46	1
TTN	Del_4q34.3	0.46	1
USP9X	6q-Del	0.46	1
Amp_6q12	Amp_13q31.3	0.46	1
C15orf23	RB1	0.461	1
CAMTA1	9p-Del	0.461	1
CBL	PARM1	0.461	1
GUCY2F	Del_11q23.3	0.461	1
MPP7	17p-Del	0.461	1
NGF	PARM1	0.461	1
NGF	13q-Amp	0.461	1
OR6C74	PARM1	0.461	1
OR6C74	13q-Amp	0.461	1
PARM1	RQCD1	0.461	1
STK19	Del_10q21.1	0.461	1
20q-Amp	Amp_17q25.3	0.461	1
10p-Del	Amp_4q12	0.461	1
10p-Del	Amp_12q15	0.461	1
17p-Del	Del_1p22.1	0.461	1
Amp_5p15.33	Del_1p22.1	0.461	1
C10orf28	RELN	0.462	1
CDKN2A	11q-Del	0.462	1
COL3A1	6q-Del	0.462	1
NBPF1	Del_5q12.1	0.462	1
PDGFRA	Amp_6p24.3	0.462	1
POTEG	14q-Del	0.462	1
TP63	Del_5q12.1	0.462	1
13q-Amp	Del_9p23	0.462	1
CAMTA1	20q-Amp	0.463	1
CAMTA1	17p-Del	0.463	1
DDX3X	FLT1	0.463	1
DDX3X	TPTE	0.463	1
DDX3X	7p-Amp	0.463	1
EPHA6	Del_9p23	0.463	1
FLT1	PPP6C	0.463	1
GML	MLL	0.463	1
GML	Amp_5p15.33	0.463	1
NAP1L2	Amp_5p15.33	0.463	1
OR4S2	Del_5p15.31	0.463	1
POTEG	7q-Amp	0.463	1
PTEN	20q-Amp	0.463	1
SLC27A5	10q-Del	0.463	1
Amp_6q12	Del_1p36.31	0.463	1
CDKN2A	NRAS	0.464	1
CPA3	Del_16q24.3	0.464	1
DDX3X	8q-Amp	0.464	1
DDX3X	Del_16q24.3	0.464	1
IGF1R	16q-Del	0.464	1
KRTAP5-10	Del_9p23	0.464	1
PPP6C	Del_16q24.3	0.464	1
SLC27A5	SLC9A11	0.464	1
SYK	16q-Del	0.464	1
BTK	11p-Del	0.465	1
DSG3	Amp_12q15	0.465	1
IDH1	TP53	0.465	1
OR4S2	THSD7B	0.465	1
RB1	Del_6q21	0.465	1
TP53	Amp_4q12	0.465	1
11p-Del	Amp_4q12	0.465	1
11p-Del	Amp_12q15	0.465	1
ALPK2	Amp_1q21.3	0.466	1
NF1	13q-Amp	0.466	1
PARM1	Del_8p23.3	0.466	1
SELP	Amp_1p12	0.466	1
14q-Del	Amp_1q44	0.466	1
ANO4	Del_13q34	0.467	1
7q-Amp	Del_4p16.3	0.467	1
Del_14q23.3	Del_Xp21.1	0.467	1
Del_16q12.1	Del_Xp21.1	0.467	1
ARID2	KIT	0.468	1
C7orf58	CCNA1	0.468	1
C7orf58	EZH2	0.468	1
C7orf58	KIT	0.468	1
C7orf58	RIPK4	0.468	1
CCNA1	14q-Del	0.468	1
CCNA1	Del_5q12.1	0.468	1
CDC42BPA	1q-Amp	0.468	1
EZH2	Del_5q12.1	0.468	1
FRMPD4	PTEN	0.468	1
GLI1	Del_5q12.1	0.468	1
KIT	Del_5q12.1	0.468	1
KRT73	1q-Amp	0.468	1
KRT73	Del_5q12.1	0.468	1
RIPK4	1q-Amp	0.468	1
RIPK4	14q-Del	0.468	1
SLC9A11	Del_9p23	0.468	1
KEL	Del_12q23.3	0.469	1
NF1	7p-Amp	0.469	1
NF1	16q-Del	0.469	1
SELP	Amp_13q31.3	0.469	1
Del_1p36.31	Del_13q34	0.469	1
BTK	CNTN5	0.47	1
CNTN5	ZFX	0.47	1
CNTN5	Amp_12q15	0.47	1
CTNNB1	DMC1	0.47	1
DDX3X	Del_10q23.31	0.47	1
DMC1	KYNU	0.47	1
DMC1	MAP2K1	0.47	1
DMC1	Amp_15q26.2	0.47	1
DSG3	6p-Del	0.47	1
EPHA4	11p-Del	0.47	1
EPHA6	13q-Amp	0.47	1
GML	KYNU	0.47	1
GML	Amp_15q26.2	0.47	1
KRTAP5-10	Amp_7p22.1	0.47	1
MPP7	9q-Del	0.47	1
Amp_20q13.33	Del_9p21.3	0.47	1
APC	Del_12q23.3	0.471	1
CTNNB1	Del_13q34	0.471	1
EPHA4	6q-Del	0.471	1
HSD11B1	Del_4p16.3	0.471	1
KYNU	Del_12q23.3	0.471	1
KYNU	Del_13q34	0.471	1
PDGFRA	Del_12q23.3	0.471	1
6q-Del	Amp_11q13.3	0.471	1
Amp_15q26.2	Del_13q34	0.471	1
Del_10q23.31	Del_Xp21.1	0.471	1
ATP5F1	MYO3B	0.472	1
C10orf28	CAMTA1	0.472	1
C10orf28	NAP1L2	0.472	1
C10orf28	22q-Amp	0.472	1
C10orf54	Amp_13q31.3	0.472	1
C7orf58	5q-Del	0.472	1
CCK	MYO3B	0.472	1
DMC1	USH2A	0.472	1
EMG1	NAP1L2	0.472	1
FAM58A	FRMPD4	0.472	1
FLT1	Del_4q34.3	0.472	1
FRMPD4	KRAS	0.472	1
GLI1	Del_10q23.31	0.472	1
KEL	Del_1p36.31	0.472	1
KRAS	MYO3B	0.472	1
NBPF1	20p-Amp	0.472	1
NUDT11	USP17L2	0.472	1
NUDT11	Amp_13q31.3	0.472	1
POTEG	Del_2q37.3	0.472	1
PTPN11	USP17L2	0.472	1
PTPN11	Amp_13q31.3	0.472	1
S100A8	USP17L2	0.472	1
18p-Del	Del_2q37.3	0.472	1
CAMTA1	Del_16p13.3	0.473	1
CTNNA3	Amp_12q15	0.473	1
DCLK3	11p-Del	0.473	1
IGF1R	10q-Del	0.473	1
KYNU	Del_6q26	0.473	1
NRAS	Del_13q34	0.473	1
POTEG	TP53	0.473	1
PTEN	Amp_12q14.1	0.473	1
TP53	18p-Del	0.473	1
APC	Amp_1p12	0.474	1
OR4S2	9q-Del	0.474	1
PDGFRA	Del_15q13.3	0.474	1
RELN	6p-Amp	0.474	1
TRERF1	Amp_1p12	0.474	1
TRERF1	Del_15q13.3	0.474	1
TTN	Amp_17q25.3	0.474	1
TTN	Del_4p16.3	0.474	1
USP9X	9q-Del	0.474	1
8p-Amp	Amp_1p12	0.474	1
ALPK2	Del_10q23.31	0.475	1
ARID2	Del_11q23.3	0.475	1
USP9X	Del_16q23.1	0.475	1
XIRP2	13q-Amp	0.475	1
DSG3	Amp_1p12	0.476	1
DSG3	Del_15q13.3	0.476	1
PDGFRA	Del_16q24.3	0.476	1
PTPN22	Del_16q24.3	0.476	1
7q-Amp	Del_5q31.3	0.476	1
Amp_7p22.1	Del_16p13.3	0.476	1
Amp_12q15	Del_10q26.3	0.476	1
CDKN2A	DMC1	0.477	1
Amp_3p13	Del_10q21.1	0.477	1
Amp_7p22.1	Amp_13q31.3	0.477	1
CCNA1	IDH1	0.478	1
CCNA1	MAN1A1	0.478	1
CCNA1	ZFX	0.478	1
CCNA1	Amp_12q15	0.478	1
CDC42BPA	IDH1	0.478	1
CDC42BPA	ZFX	0.478	1
CDC42BPA	Amp_12q15	0.478	1
EPHA4	5q-Del	0.478	1
EPHA4	Del_10p15.3	0.478	1
EZH2	ZFX	0.478	1
EZH2	Amp_12q15	0.478	1
GLI1	IDH1	0.478	1
GLI1	Amp_12q15	0.478	1
IDH1	KIT	0.478	1
KIT	MAN1A1	0.478	1
KIT	NUP214	0.478	1
MAN1A1	RIPK4	0.478	1
RIPK4	Amp_4q12	0.478	1
RIPK4	Amp_12q15	0.478	1
CBL	CYP3A4	0.479	1
CBL	PPP6C	0.479	1
CBL	RAC1	0.479	1
CCK	Amp_8q24.21	0.479	1
CPA3	NGF	0.479	1
CPA3	RB1	0.479	1
CYP3A4	NGF	0.479	1
CYP3A4	RB1	0.479	1
KRTAP5-10	Del_16p13.3	0.479	1
LGR6	NGF	0.479	1
LGR6	RB1	0.479	1
NGF	RAC1	0.479	1
OR6C74	8q-Amp	0.479	1
OR6C74	Amp_6q12	0.479	1
PPP6C	RB1	0.479	1
RQCD1	Del_16q24.3	0.479	1
SLC27A5	Del_16p13.3	0.479	1
ANO4	Amp_7p22.1	0.48	1
CCK	TTN	0.48	1
DSG3	10q-Del	0.48	1
GUCY2F	Del_19p13.3	0.48	1
KCND2	Del_6q26	0.48	1
KRAS	TTN	0.48	1
PARM1	Del_19p13.3	0.48	1
TP53	10q-Del	0.48	1
TP53	Del_10q26.3	0.48	1
TTN	Amp_1q21.3	0.48	1
13q-Amp	Del_3q13.31	0.48	1
ANO4	MAP2K1	0.481	1
C10orf28	7p-Amp	0.481	1
CNTN5	Del_9p23	0.481	1
CTNNB1	10q-Del	0.481	1
IGF1R	5q-Del	0.481	1
Del_5q31.3	Del_8p23.3	0.481	1
Del_5q31.3	Del_15q21.1	0.481	1
CBL	Amp_1q44	0.482	1
COL3A1	18p-Del	0.482	1
IGF1R	STK19	0.482	1
KEL	9p-Del	0.482	1
MPP7	Del_1p22.1	0.482	1
11q-Del	Del_2q37.3	0.482	1
Amp_17q25.3	Del_4p16.3	0.482	1
ARID2	DDX3X	0.483	1
ARID2	RAC1	0.483	1
C7orf58	PPP6C	0.483	1
CCNA1	NF1	0.483	1
CCNA1	9p-Del	0.483	1
CCNA1	Del_15q21.1	0.483	1
CDC42BPA	Del_8p23.3	0.483	1
CDKN2A	Del_6q26	0.483	1
COL3A1	Del_6q21	0.483	1
CPA3	14q-Del	0.483	1
EPHA7	Del_5q31.3	0.483	1
EZH2	Del_15q21.1	0.483	1
GLI1	Del_15q21.1	0.483	1
KRT73	9p-Del	0.483	1
NF1	Del_6q21	0.483	1
PPP6C	14q-Del	0.483	1
PTEN	XIRP2	0.483	1
RAC1	Del_5q12.1	0.483	1
RIPK4	Del_8p23.3	0.483	1
RIPK4	Del_15q21.1	0.483	1
SELP	Del_5q31.3	0.483	1
Amp_20q13.33	Del_10p15.3	0.483	1
C10orf54	USH2A	0.484	1
CCK	CTNNA3	0.484	1
CCK	Amp_3p13	0.484	1
CDK4	USH2A	0.484	1
CDKN2A	PTEN	0.484	1
CTNNA3	FAM58A	0.484	1
CTNNA3	GNAQ	0.484	1
DCLK3	Del_8p23.3	0.484	1
GNAQ	Amp_3p13	0.484	1
KRAS	Amp_3p13	0.484	1
OR4S2	20p-Amp	0.484	1
OXA1L	Del_10q21.1	0.484	1
POTEG	Del_15q21.1	0.484	1
RPTN	Del_9p23	0.484	1
SLC9A11	Del_Xp21.1	0.484	1
USP9X	Del_2q37.3	0.484	1
20p-Amp	Del_8p23.3	0.484	1
CDKN2A	MPP7	0.485	1
CDKN2A	Del_1p22.1	0.485	1
KCND2	Del_10q23.31	0.485	1
BTK	NRAS	0.486	1
C10orf28	8p-Amp	0.486	1
C10orf28	Del_5p15.31	0.486	1
CTNNB1	7p-Amp	0.486	1
EMG1	8p-Amp	0.486	1
EPHA4	9q-Del	0.486	1
EPHA4	Amp_1q21.3	0.486	1
MAN1A1	NRAS	0.486	1
USH2A	18p-Del	0.486	1
8q-Amp	Del_1p22.1	0.486	1
14q-Del	Amp_6p24.3	0.486	1
Amp_1q21.3	Amp_11q13.3	0.486	1
EPHA4	Amp_13q31.3	0.487	1
MPP7	11q-Del	0.487	1
Amp_3p13	Amp_6p24.3	0.487	1
Amp_11q13.3	Amp_13q31.3	0.487	1
C10orf54	Del_5q31.3	0.488	1
GNAQ	6q-Del	0.488	1
KRAS	6q-Del	0.488	1
SYK	Del_5q31.3	0.488	1
TTN	Del_13q34	0.488	1
Amp_20q13.33	Del_12q23.3	0.488	1
Amp_22q13.2	Del_13q34	0.488	1
RELN	Amp_7q34	0.489	1
Amp_7q34	Amp_17q25.3	0.489	1
Del_6q21	Del_Xp21.1	0.489	1
CAMTA1	NRAS	0.49	1
FRMPD4	KYNU	0.49	1
FRMPD4	10p-Del	0.49	1
FRMPD4	Amp_15q26.2	0.49	1
KYNU	Amp_6p24.3	0.49	1
MAP2K1	Amp_6p24.3	0.49	1
MYO16	20q-Amp	0.49	1
MYO3B	Amp_15q26.2	0.49	1
SLC38A4	Amp_5p15.33	0.49	1
THSD7B	Del_9p21.3	0.49	1
DMC1	RPTN	0.491	1
KRTAP5-10	Amp_8q24.21	0.491	1
MSTN	Amp_8q24.21	0.491	1
NAP1L2	Del_6q21	0.491	1
ZNF780B	Amp_8q24.21	0.491	1
ANO4	1q-Amp	0.492	1
ARID2	Del_12q23.3	0.492	1
COL3A1	Del_5q12.1	0.492	1
KIT	RELN	0.492	1
OR6C74	Amp_6p24.3	0.492	1
USP17L2	Amp_22q13.2	0.492	1
14q-Del	Del_13q34	0.492	1
Amp_13q31.3	Amp_22q13.2	0.492	1
CNTN5	Del_19p13.3	0.493	1
KCND2	Del_10p15.3	0.494	1
NF1	Del_16q24.3	0.494	1
TRERF1	Del_16p13.3	0.494	1
C10orf54	Del_9p23	0.495	1
IDH1	TP63	0.495	1
PTPN11	Del_9p23	0.495	1
SLC38A4	6q-Del	0.495	1
16q-Del	Amp_1p12	0.495	1
ALPK2	CTNNB1	0.496	1
ALPK2	MAP2K1	0.496	1
APC	MLL	0.496	1
APC	17p-Del	0.496	1
APCS	Del_1p36.31	0.496	1
APCS	Del_4q34.3	0.496	1
ATP5F1	KCND2	0.496	1
COL3A1	HRAS	0.496	1
CTNNB1	Amp_20q13.33	0.496	1
CYP3A5	KEL	0.496	1
EMG1	Del_10q26.3	0.496	1
FAM58A	Amp_1q21.3	0.496	1
GNAQ	KCND2	0.496	1
KYNU	Amp_20q13.33	0.496	1
MAP2K1	Amp_22q13.2	0.496	1
NBPF1	Amp_1q44	0.496	1
PDGFRA	RELN	0.496	1
PDGFRA	20q-Amp	0.496	1
PTPN22	20q-Amp	0.496	1
PTPN22	17p-Del	0.496	1
RELN	8p-Amp	0.496	1
SYK	Del_4q34.3	0.496	1
20q-Amp	Del_5p15.31	0.496	1
CBL	EPHA4	0.497	1
CBL	Amp_11q13.3	0.497	1
CCNA1	Del_15q13.3	0.497	1
EPHA4	NGF	0.497	1
EPHA4	OR6C74	0.497	1
EZH2	Del_15q13.3	0.497	1
NGF	Amp_11q13.3	0.497	1
OR6C74	Amp_11q13.3	0.497	1
PTEN	Amp_1q21.3	0.497	1
RB1	6p-Del	0.497	1
RIPK4	Amp_1p12	0.497	1
C15orf23	MSTN	0.498	1
DCLK3	Del_13q34	0.498	1
FGFR2	Del_13q34	0.498	1
FLT1	6p-Del	0.498	1
GUCY2F	KRTAP5-10	0.498	1
GUCY2F	MSTN	0.498	1
GUCY2F	SLC27A5	0.498	1
KRTAP5-10	13q-Amp	0.498	1
NF1	5q-Del	0.498	1
PARM1	SLC27A5	0.498	1
SLC27A5	13q-Amp	0.498	1
22q-Amp	10q-Del	0.498	1
Amp_11q13.3	Del_1p36.31	0.498	1
C10orf28	DCLK3	0.499	1
C10orf28	POTEG	0.499	1
C10orf28	20p-Amp	0.499	1
C10orf54	7q-Amp	0.499	1
CDK4	7q-Amp	0.499	1
DCLK3	EMG1	0.499	1
EMG1	FGFR2	0.499	1
EMG1	20p-Amp	0.499	1
FRMPD4	Del_1p36.31	0.499	1
FRMPD4	Del_4q34.3	0.499	1
PTPN11	7q-Amp	0.499	1
Amp_4q12	Del_10q23.31	0.499	1
Amp_8q24.21	Del_5q31.3	0.499	1
Amp_12q15	Del_10q23.31	0.499	1
ACSBG1	BRAF	0.5	1
BRAF	BTK	0.5	1
BRAF	FGFR2	0.5	1
BRAF	MAN1A1	0.5	1
BRAF	NAP1L2	0.5	1
BRAF	OR6C74	0.5	1
BRAF	RQCD1	0.5	1
BRAF	ZFX	0.5	1
BRAF	5q-Del	0.5	1
Amp_7q34	Del_1p36.31	0.5	1
APCS	7q-Amp	0.501	1
CCNA1	CTNNB1	0.501	1
CCNA1	KYNU	0.501	1
CCNA1	MAP2K1	0.501	1
CDC42BPA	CTNNB1	0.501	1
CTNNB1	GLI1	0.501	1
CTNNB1	KRT73	0.501	1
CTNNB1	RIPK4	0.501	1
EZH2	MAP2K1	0.501	1
EZH2	Amp_15q26.2	0.501	1
GLI1	MAP2K1	0.501	1
GLI1	Amp_15q26.2	0.501	1
KIT	KYNU	0.501	1
KIT	MAP2K1	0.501	1
KIT	Amp_15q26.2	0.501	1
KRT73	KYNU	0.501	1
KRT73	Amp_15q26.2	0.501	1
KYNU	RIPK4	0.501	1
MAP2K1	RIPK4	0.501	1
RIPK4	Amp_15q26.2	0.501	1
1q-Amp	Del_2q37.3	0.501	1
6p-Del	Amp_7q34	0.501	1
Amp_7q34	Amp_11q13.3	0.501	1
CNTN5	9q-Del	0.502	1
CPA3	Del_15q21.1	0.502	1
DDX3X	NF1	0.502	1
KRTAP5-10	Amp_20q13.33	0.502	1
NF1	PPP6C	0.502	1
NF1	Amp_6q12	0.502	1
SLC27A5	6q-Del	0.502	1
SLC27A5	Amp_20q13.33	0.502	1
SLC27A5	Amp_22q13.2	0.502	1
ZNF780B	6q-Del	0.502	1
ZNF780B	Amp_20q13.33	0.502	1
ZNF780B	Amp_22q13.2	0.502	1
Amp_6q12	Del_15q21.1	0.502	1
C15orf23	NAP1L2	0.503	1
C15orf23	Amp_5p15.33	0.503	1
CAMTA1	GUCY2F	0.503	1
CDC42BPA	Del_6q21	0.503	1
CDK4	Del_3q13.31	0.503	1
CDK4	Del_19p13.3	0.503	1
EZH2	Del_6q21	0.503	1
GLI1	Del_6q21	0.503	1
GUCY2F	Amp_5p15.33	0.503	1
NUDT11	Del_3q13.31	0.503	1
OR4S2	Del_9p21.3	0.503	1
PARM1	PTEN	0.503	1
RIPK4	Del_6q21	0.503	1
TPTE	Del_5q31.3	0.503	1
13q-Amp	17p-Del	0.503	1
13q-Amp	Amp_5p15.33	0.503	1
CAMTA1	Del_16q12.1	0.504	1
DDX3X	Amp_1q44	0.504	1
DSG3	Amp_1q21.3	0.504	1
FAM58A	Amp_7q34	0.504	1
GML	Del_16q23.1	0.504	1
NF1	7q-Amp	0.504	1
OR4S2	Del_12q23.3	0.504	1
PTEN	Del_14q23.3	0.504	1
USP9X	Del_12q23.3	0.504	1
USP9X	Del_13q34	0.504	1
22q-Amp	Del_14q23.3	0.504	1
Amp_1q44	Amp_6q12	0.504	1
Amp_8q24.21	Del_16p13.3	0.504	1
ARID2	6p-Amp	0.505	1
7q-Amp	Del_16q23.1	0.505	1
ACSBG1	IDH1	0.506	1
ACSBG1	ZFX	0.506	1
APCS	MAN1A1	0.506	1
APCS	ZFX	0.506	1
BTK	IGF1R	0.506	1
BTK	SYK	0.506	1
CDKN2A	Amp_6p24.3	0.506	1
CYP3A5	NUP214	0.506	1
CYP3A5	Amp_4q12	0.506	1
CYP3A5	Amp_12q15	0.506	1
IDH1	IGF1R	0.506	1
IGF1R	Amp_4q12	0.506	1
NUP214	SYK	0.506	1
SYK	Amp_4q12	0.506	1
8q-Amp	6p-Del	0.506	1
ALPK2	Amp_20q13.33	0.507	1
ATP5F1	MPP7	0.507	1
CCK	MPP7	0.507	1
DCLK3	Del_15q13.3	0.507	1
GNAQ	MPP7	0.507	1
KRAS	Del_4p16.3	0.507	1
NBPF1	Amp_1p12	0.507	1
PDGFRA	Del_9p21.3	0.507	1
CPA3	Del_19p13.3	0.508	1
CYP3A4	Del_19p13.3	0.508	1
DDX3X	Del_3q13.31	0.508	1
MPP7	Del_14q23.3	0.508	1
RAC1	Del_19p13.3	0.508	1
TP63	8q-Amp	0.508	1
1q-Amp	Del_4p16.3	0.508	1
8q-Amp	Del_16q24.3	0.508	1
Amp_6q12	Del_3q13.31	0.508	1
ALPK2	Del_Xp21.1	0.509	1
CNTN5	LGR6	0.509	1
CNTN5	Amp_6q12	0.509	1
COL3A1	NUDT11	0.509	1
COL3A1	S100A8	0.509	1
DSG3	Del_13q34	0.509	1
MYO16	Amp_17q25.3	0.509	1
NF1	Amp_1q44	0.509	1
PTPN11	11q-Del	0.509	1
TP53	Del_13q34	0.509	1
Amp_1q44	Del_15q21.1	0.509	1
Amp_22q13.2	Del_Xp21.1	0.509	1
Del_8p23.3	Del_16q23.1	0.509	1
BTK	Del_10p15.3	0.51	1
CPA3	Del_6q21	0.51	1
IDH1	Del_10p15.3	0.51	1
MLL	Amp_7q34	0.51	1
MPP7	ZFX	0.51	1
MPP7	Amp_12q15	0.51	1
NUP214	Amp_17q25.3	0.51	1
USH2A	Del_5q12.1	0.51	1
ZFX	Del_1p22.1	0.51	1
9p-Del	Amp_4q12	0.51	1
9p-Del	Amp_12q15	0.51	1
Amp_4q12	Del_4p16.3	0.51	1
Amp_12q15	Del_1p22.1	0.51	1
APCS	C7orf58	0.512	1
APCS	14q-Del	0.512	1
ARID2	CYP3A5	0.512	1
ARID2	IGF1R	0.512	1
CCNA1	Amp_5p15.33	0.512	1
CDC42BPA	17p-Del	0.512	1
CNTN5	10p-Del	0.512	1
CTNNB1	TP53	0.512	1
CYP3A5	14q-Del	0.512	1
EPHA4	Del_10q26.3	0.512	1
EZH2	Amp_5p15.33	0.512	1
GLI1	17p-Del	0.512	1
GLI1	Amp_5p15.33	0.512	1
IGF1R	14q-Del	0.512	1
IGF1R	Del_5q12.1	0.512	1
KIT	20q-Amp	0.512	1
KRTAP5-10	9q-Del	0.512	1
MSTN	Amp_1q21.3	0.512	1
PTPN22	Amp_8q24.21	0.512	1
RIPK4	Amp_5p15.33	0.512	1
RPTN	Del_15q13.3	0.512	1
SYK	14q-Del	0.512	1
11p-Del	Amp_15q26.2	0.512	1
CAMTA1	Amp_7q34	0.513	1
CBL	EPHA6	0.513	1
CBL	USP17L2	0.513	1
CDKN2A	17p-Del	0.513	1
COL3A1	Amp_7p22.1	0.513	1
DCLK3	Amp_6p24.3	0.513	1
DCLK3	Del_16q24.3	0.513	1
EPHA6	OR6C74	0.513	1
NBPF1	8q-Amp	0.513	1
NBPF1	Amp_6p24.3	0.513	1
NGF	USP17L2	0.513	1
NGF	Amp_13q31.3	0.513	1
OR6C74	Amp_13q31.3	0.513	1
RQCD1	USP17L2	0.513	1
SLC9A11	Del_5q31.3	0.513	1
20p-Amp	Del_16q24.3	0.513	1
8q-Amp	Del_2q37.3	0.513	1
DDX3X	EPHA6	0.514	1
DSG3	KRTAP5-10	0.514	1
PARM1	Del_6q26	0.514	1
SYK	11q-Del	0.514	1
CDKN2A	MYO16	0.515	1
CYP3A5	Amp_1q44	0.515	1
EPHA6	Del_9p21.3	0.515	1
RPTN	9p-Del	0.515	1
TP63	10p-Del	0.515	1
Del_8p23.3	Del_13q34	0.515	1
COL3A1	Amp_7q34	0.516	1
CPA3	MSTN	0.516	1
DDX3X	KRTAP5-10	0.516	1
DDX3X	ZNF780B	0.516	1
EZH2	7p-Amp	0.516	1
KCND2	PTEN	0.516	1
KIT	7p-Amp	0.516	1
KRTAP5-10	PPP6C	0.516	1
KRTAP5-10	RAC1	0.516	1
KRTAP5-10	Amp_6q12	0.516	1
LGR6	SLC27A5	0.516	1
MSTN	PPP6C	0.516	1
PPP6C	SLC27A5	0.516	1
ZNF780B	Amp_6q12	0.516	1
20p-Amp	Amp_12q14.1	0.516	1
Amp_1p12	Del_5q31.3	0.516	1
10q-Del	Amp_5p15.33	0.517	1
11p-Del	Del_Xp21.1	0.517	1
11q-Del	Del_16p13.3	0.517	1
Amp_12q14.1	Del_16q23.1	0.517	1
ARID2	EPHA4	0.518	1
C10orf54	NAP1L2	0.518	1
C10orf54	PTEN	0.518	1
CAMTA1	OXA1L	0.518	1
CBL	Del_6q26	0.518	1
CDK4	PTEN	0.518	1
CDK4	22q-Amp	0.518	1
DMC1	SLC9A11	0.518	1
NAP1L2	PTPN11	0.518	1
NUDT11	22q-Amp	0.518	1
OXA1L	PTEN	0.518	1
RB1	Del_6q26	0.518	1
RELN	7p-Amp	0.518	1
S100A8	22q-Amp	0.518	1
ATP5F1	SELP	0.519	1
C10orf54	1q-Amp	0.519	1
CCK	MYO16	0.519	1
CCK	SLC38A4	0.519	1
EPHA7	FAM58A	0.519	1
EPHA7	GNAQ	0.519	1
FAM58A	MYO16	0.519	1
GNAQ	MYO16	0.519	1
GNAQ	SLC38A4	0.519	1
MYO16	10p-Del	0.519	1
NRAS	Del_10p15.3	0.519	1
OXA1L	1q-Amp	0.519	1
RELN	8q-Amp	0.519	1
S100A8	1q-Amp	0.519	1
16q-Del	Amp_8q24.21	0.519	1
Amp_12q14.1	Del_10q21.1	0.519	1
EPHA6	7p-Amp	0.52	1
KRTAP5-10	Del_10q26.3	0.52	1
PTPN22	Amp_3p13	0.52	1
1q-Amp	Del_14q23.3	0.52	1
1q-Amp	Del_16q12.1	0.52	1
8p-Amp	Amp_3p13	0.52	1
16q-Del	Amp_5p15.33	0.52	1
CDKN2A	GUCY2F	0.521	1
CDKN2A	PARM1	0.521	1
CPA3	Del_15q13.3	0.521	1
DDX3X	Amp_1p12	0.521	1
DDX3X	Del_15q13.3	0.521	1
RAC1	Amp_1p12	0.521	1
RAC1	Del_15q13.3	0.521	1
XIRP2	Amp_6p24.3	0.521	1
Amp_6q12	Del_15q13.3	0.521	1
Amp_13q31.3	Del_9p23	0.521	1
C7orf58	9q-Del	0.522	1
STK19	5q-Del	0.522	1
ZNF780B	Amp_7q34	0.522	1
CCNA1	OR4S2	0.523	1
EZH2	OR4S2	0.523	1
FRMPD4	20p-Amp	0.523	1
FRMPD4	14q-Del	0.523	1
FRMPD4	Amp_20q13.33	0.523	1
HSD11B1	Amp_1q21.3	0.523	1
KIT	USP9X	0.523	1
KRT73	USP9X	0.523	1
MYO3B	18p-Del	0.523	1
MYO3B	Del_2q37.3	0.523	1
TTN	Amp_6p24.3	0.523	1
DSG3	Del_10q23.31	0.524	1
MYO3B	OR4S2	0.524	1
TP53	Del_10q23.31	0.524	1
C15orf23	PTPN22	0.525	1
C15orf23	TRERF1	0.525	1
C15orf23	8p-Amp	0.525	1
C15orf23	Del_9p21.3	0.525	1
COL3A1	Del_11q23.3	0.525	1
GUCY2F	PDGFRA	0.525	1
GUCY2F	PTPN22	0.525	1
GUCY2F	Del_5p15.31	0.525	1
MYO16	11q-Del	0.525	1
PARM1	PTPN22	0.525	1
PARM1	8p-Amp	0.525	1
PDGFRA	9p-Del	0.525	1
PTEN	Del_16q23.1	0.525	1
TTN	Amp_6q12	0.525	1
13q-Amp	Del_5p15.31	0.525	1
Del_6q26	Del_Xp21.1	0.525	1
C7orf58	Del_5q12.1	0.526	1
C7orf58	Del_9p21.3	0.526	1
CDKN2A	KRT73	0.526	1
KEL	Del_15q21.1	0.526	1
MYO3B	Del_11q23.3	0.526	1
NF1	Del_1p36.31	0.526	1
NF1	Del_4q34.3	0.526	1
PTPN22	Del_11q23.3	0.526	1
Amp_1p12	Del_16q24.3	0.526	1
ANO4	Del_9p21.3	0.527	1
APCS	Amp_6p24.3	0.527	1
BTK	EPHA7	0.527	1
COL3A1	Del_15q21.1	0.527	1
EPHA7	IDH1	0.527	1
EPHA7	Amp_12q15	0.527	1
FRMPD4	Del_10q23.31	0.527	1
IGF1R	1q-Amp	0.527	1
IGF1R	Amp_6p24.3	0.527	1
NUP214	SELP	0.527	1
RAC1	Del_11q23.3	0.527	1
SYK	1q-Amp	0.527	1
CNTN5	KYNU	0.528	1
CNTN5	Amp_15q26.2	0.528	1
CYP3A5	NF1	0.528	1
CYP3A5	Del_8p23.3	0.528	1
CYP3A5	Del_15q21.1	0.528	1
IGF1R	Del_15q21.1	0.528	1
KCND2	Amp_15q26.2	0.528	1
KEL	Amp_3p13	0.528	1
10p-Del	Amp_15q26.2	0.528	1
Amp_22q13.2	Del_10q21.1	0.528	1
DCLK3	20q-Amp	0.529	1
DCLK3	Amp_5p15.33	0.529	1
FGFR2	17p-Del	0.529	1
MLL	20p-Amp	0.529	1
NBPF1	20q-Amp	0.529	1
PTPN22	6q-Del	0.529	1
THSD7B	Del_5q12.1	0.529	1
USP9X	Del_11q23.3	0.529	1
20p-Amp	17p-Del	0.529	1
20q-Amp	Del_2q37.3	0.529	1
18p-Del	Amp_5p15.33	0.529	1
Amp_8q24.21	Del_16q24.3	0.529	1
ACSBG1	MAP2K1	0.53	1
APCS	CTNNB1	0.53	1
APCS	Amp_15q26.2	0.53	1
CTNNB1	IGF1R	0.53	1
CTNNB1	SYK	0.53	1
CYP3A5	MAP2K1	0.53	1
CYP3A5	Amp_15q26.2	0.53	1
GNAQ	16q-Del	0.53	1
IGF1R	MAP2K1	0.53	1
KRAS	16q-Del	0.53	1
STK19	Del_11q23.3	0.53	1
SYK	Amp_15q26.2	0.53	1
APC	7p-Amp	0.531	1
COL3A1	11p-Del	0.531	1
GUCY2F	Amp_7p22.1	0.531	1
KIT	Del_10p15.3	0.531	1
C15orf23	DMC1	0.532	1
CAMTA1	PPP6C	0.532	1
CYP3A4	PTEN	0.532	1
CYP3A4	22q-Amp	0.532	1
DMC1	Del_11q23.3	0.532	1
GML	PARM1	0.532	1
GML	13q-Amp	0.532	1
NAP1L2	PPP6C	0.532	1
NAP1L2	Amp_6q12	0.532	1
PTEN	Amp_6q12	0.532	1
1q-Amp	Amp_12q14.1	0.532	1
1q-Amp	Del_16p13.3	0.532	1
10p-Del	Amp_22q13.2	0.532	1
9q-Del	Amp_12q14.1	0.532	1
Amp_1q21.3	Amp_12q14.1	0.532	1
Amp_5p15.33	Del_10q23.31	0.532	1
Amp_17q25.3	Del_16q23.1	0.532	1
APC	NUDT11	0.533	1
APC	S100A8	0.533	1
C10orf54	TRERF1	0.533	1
CDK4	PDGFRA	0.533	1
IDH1	STK19	0.533	1
IDH1	Del_6q21	0.533	1
MAN1A1	STK19	0.533	1
NUDT11	PDGFRA	0.533	1
NUDT11	PTPN22	0.533	1
NUDT11	Del_5p15.31	0.533	1
NUP214	Del_6q21	0.533	1
OXA1L	PTPN22	0.533	1
OXA1L	8p-Amp	0.533	1
PDGFRA	PTPN11	0.533	1
PTPN11	TRERF1	0.533	1
PTPN11	8p-Amp	0.533	1
S100A8	TRERF1	0.533	1
STK19	ZFX	0.533	1
IDH1	USH2A	0.534	1
KRTAP5-10	6p-Del	0.534	1
MSTN	6p-Del	0.534	1
NF1	6p-Amp	0.534	1
PARM1	Del_5q31.3	0.534	1
SLC27A5	6p-Del	0.534	1
ZNF780B	Amp_11q13.3	0.534	1
6p-Amp	Del_16p13.3	0.534	1
Amp_4q12	Del_10q21.1	0.534	1
ALPK2	11p-Del	0.535	1
ANO4	NRAS	0.535	1
KCND2	Del_6q21	0.535	1
ARID2	9p-Del	0.536	1
CDK4	Del_11q23.3	0.536	1
FAM58A	Amp_1q44	0.536	1
GNAQ	Amp_1q44	0.536	1
MAN1A1	Amp_7p22.1	0.536	1
OXA1L	Del_11q23.3	0.536	1
PTPN11	Del_11q23.3	0.536	1
6p-Del	Del_3q13.31	0.536	1
Amp_7p22.1	Amp_12q15	0.536	1
CBL	TTN	0.537	1
NGF	TTN	0.537	1
RB1	TTN	0.537	1
RPTN	Del_6q26	0.537	1
Amp_12q14.1	Del_13q34	0.537	1
APCS	Del_10q26.3	0.538	1
CTNNA3	EMG1	0.538	1
EPHA4	Del_8p23.3	0.538	1
FLT1	HSD11B1	0.538	1
HSD11B1	Del_4q34.3	0.538	1
IGF1R	Del_10q26.3	0.538	1
PDGFRA	Del_14q23.3	0.538	1
RELN	1q-Amp	0.538	1
RELN	18p-Del	0.538	1
STK19	Del_4q34.3	0.538	1
TTN	Del_9p21.3	0.538	1
6p-Del	Del_8p23.3	0.538	1
6p-Del	Del_15q21.1	0.538	1
Amp_1p12	Del_12q23.3	0.538	1
Del_5p15.31	Del_14q23.3	0.538	1
APCS	Del_9p23	0.539	1
C10orf54	RELN	0.539	1
CAMTA1	Amp_17q25.3	0.539	1
CNTN5	22q-Amp	0.539	1
EPHA6	IDH1	0.539	1
EPHA6	Amp_12q15	0.539	1
EPHA7	Del_14q23.3	0.539	1
GUCY2F	Del_16q12.1	0.539	1
KEL	NRAS	0.539	1
KRTAP5-10	TP63	0.539	1
KRTAP5-10	8q-Amp	0.539	1
MSTN	8q-Amp	0.539	1
MYO16	Del_14q23.3	0.539	1
NAP1L2	Amp_17q25.3	0.539	1
NRAS	OR6C74	0.539	1
NRAS	RQCD1	0.539	1
NRAS	Del_4q34.3	0.539	1
PTEN	Del_1p22.1	0.539	1
PTEN	Del_4p16.3	0.539	1
RPTN	13q-Amp	0.539	1
SLC27A5	Del_10q23.31	0.539	1
SLC27A5	Del_16q24.3	0.539	1
SYK	Del_9p23	0.539	1
USH2A	9p-Del	0.539	1
ZNF780B	Del_16q24.3	0.539	1
CCNA1	Del_14q23.3	0.54	1
CDC42BPA	Del_16q12.1	0.54	1
CNTN5	10q-Del	0.54	1
CYP3A4	MLL	0.54	1
CYP3A4	17p-Del	0.54	1
DDX3X	Amp_5p15.33	0.54	1
DSG3	5q-Del	0.54	1
EZH2	Del_16q12.1	0.54	1
GLI1	Del_16q12.1	0.54	1
KIT	RPTN	0.54	1
KIT	Del_16q12.1	0.54	1
LGR6	17p-Del	0.54	1
MLL	RAC1	0.54	1
RAC1	20q-Amp	0.54	1
RIPK4	Del_14q23.3	0.54	1
RIPK4	Del_16q12.1	0.54	1
USH2A	Del_12q23.3	0.54	1
7q-Amp	16q-Del	0.54	1
Amp_5p15.33	Amp_6q12	0.54	1
GNAQ	5q-Del	0.541	1
KRAS	5q-Del	0.541	1
OR4S2	Amp_20q13.33	0.541	1
PPP6C	XIRP2	0.541	1
RELN	Del_10q23.31	0.541	1
XIRP2	Amp_6q12	0.541	1
Amp_22q13.2	Del_16q12.1	0.541	1
C7orf58	Amp_7q34	0.542	1
CNTN5	1q-Amp	0.542	1
CTNNB1	TP63	0.542	1
GML	XIRP2	0.542	1
KYNU	Del_16q24.3	0.542	1
NF1	6q-Del	0.542	1
TP63	Amp_15q26.2	0.542	1
TPTE	20q-Amp	0.542	1
ACSBG1	Del_15q13.3	0.543	1
APCS	Amp_1p12	0.543	1
APCS	Del_15q13.3	0.543	1
CYP3A5	Amp_1p12	0.543	1
HSD11B1	Del_5q31.3	0.543	1
STK19	Del_5q31.3	0.543	1
SYK	Amp_1p12	0.543	1
XIRP2	Del_4p16.3	0.543	1
ANO4	DMC1	0.544	1
APC	NRAS	0.544	1
CCNA1	Del_16p13.3	0.544	1
GLI1	Amp_12q14.1	0.544	1
GLI1	Del_16p13.3	0.544	1
KCND2	Del_5p15.31	0.544	1
KIT	Amp_12q14.1	0.544	1
KIT	Del_16p13.3	0.544	1
KRT73	Del_16p13.3	0.544	1
USP9X	Amp_3p13	0.544	1
XIRP2	Del_8p23.3	0.544	1
CDK4	XIRP2	0.545	1
DDX3X	Del_9p23	0.545	1
22q-Amp	6p-Amp	0.545	1
7q-Amp	Del_19p13.3	0.545	1
16q-Del	Amp_12q15	0.545	1
CBL	Del_3q13.31	0.546	1
FRMPD4	Del_8p23.3	0.546	1
KYNU	Del_1p22.1	0.546	1
OR6C74	Del_19p13.3	0.546	1
RB1	Del_19p13.3	0.546	1
RQCD1	Del_19p13.3	0.546	1
SLC38A4	1q-Amp	0.546	1
TRERF1	Amp_1q21.3	0.546	1
Amp_15q26.2	Amp_17q25.3	0.546	1
Amp_15q26.2	Del_4p16.3	0.546	1
BRAF	Del_9p21.3	0.547	1
C15orf23	FGFR2	0.547	1
C15orf23	NBPF1	0.547	1
C15orf23	POTEG	0.547	1
C15orf23	Del_2q37.3	0.547	1
CDK4	FGFR2	0.547	1
CDK4	NBPF1	0.547	1
CDK4	POTEG	0.547	1
CDK4	18p-Del	0.547	1
FGFR2	GUCY2F	0.547	1
FGFR2	PTPN11	0.547	1
GUCY2F	Del_2q37.3	0.547	1
NBPF1	S100A8	0.547	1
NBPF1	13q-Amp	0.547	1
NUDT11	Del_2q37.3	0.547	1
OXA1L	POTEG	0.547	1
POTEG	PTPN11	0.547	1
S100A8	20p-Amp	0.547	1
S100A8	18p-Del	0.547	1
13q-Amp	18p-Del	0.547	1
EPHA6	Del_16q23.1	0.548	1
FLT1	Amp_20q13.33	0.548	1
KRTAP5-10	9p-Del	0.548	1
RELN	Amp_17q25.3	0.548	1
Amp_3p13	Del_2q37.3	0.548	1
Amp_6p24.3	Del_14q23.3	0.548	1
Amp_20q13.33	Del_1p36.31	0.548	1
ANO4	Del_19p13.3	0.549	1
KCND2	7p-Amp	0.549	1
RPTN	Del_10p15.3	0.549	1
Amp_1q44	Del_5q31.3	0.549	1
CDKN2A	Amp_7q34	0.55	1
GUCY2F	7q-Amp	0.55	1
MYO3B	Del_13q34	0.55	1
NBPF1	Del_9p23	0.55	1
13q-Amp	7q-Amp	0.55	1
C10orf28	KCND2	0.551	1
DDX3X	DMC1	0.551	1
DDX3X	GML	0.551	1
DMC1	LGR6	0.551	1
DMC1	Amp_6q12	0.551	1
EMG1	KCND2	0.551	1
EPHA6	Amp_17q25.3	0.551	1
GML	RAC1	0.551	1
KEL	Del_15q13.3	0.551	1
ACSBG1	OR4S2	0.552	1
ATP5F1	Del_1p36.31	0.552	1
CCK	KEL	0.552	1
CTNNA3	9q-Del	0.552	1
EZH2	Del_10q21.1	0.552	1
FAM58A	FLT1	0.552	1
FAM58A	Del_4q34.3	0.552	1
GLI1	Del_10q21.1	0.552	1
GNAQ	Del_1p36.31	0.552	1
KEL	KRAS	0.552	1
KIT	Del_9p21.3	0.552	1
KRAS	Del_1p36.31	0.552	1
KRT73	Del_10q21.1	0.552	1
KRTAP5-10	Amp_13q31.3	0.552	1
SLC27A5	Amp_13q31.3	0.552	1
SYK	USP9X	0.552	1
USP17L2	14q-Del	0.552	1
USP17L2	Del_5q12.1	0.552	1
22q-Amp	Del_10q21.1	0.552	1
C7orf58	NF1	0.553	1
CTNNB1	Del_10q26.3	0.553	1
MAP2K1	NRAS	0.553	1
NF1	Del_5q12.1	0.553	1
NUDT11	10q-Del	0.553	1
OR4S2	10q-Del	0.553	1
OXA1L	10q-Del	0.553	1
STK19	10q-Del	0.553	1
8q-Amp	6q-Del	0.553	1
Del_5q12.1	Del_8p23.3	0.553	1
ANO4	Del_5q12.1	0.554	1
CCNA1	Del_16q23.1	0.554	1
DDX3X	TRERF1	0.554	1
EZH2	Del_16q23.1	0.554	1
GLI1	Del_16q23.1	0.554	1
HSD11B1	Del_5q12.1	0.554	1
KIT	Del_16q23.1	0.554	1
PDGFRA	PPP6C	0.554	1
PPP6C	8p-Amp	0.554	1
STK19	Del_5q12.1	0.554	1
5q-Del	Amp_6p24.3	0.554	1
PPP6C	10q-Del	0.555	1
PTPN22	Del_6q21	0.555	1
SLC9A11	Del_4p16.3	0.555	1
TTN	Amp_1q44	0.555	1
6p-Amp	Del_1p22.1	0.555	1
8p-Amp	Del_6q21	0.555	1
BRAF	TPTE	0.556	1
PARM1	Del_10p15.3	0.556	1
DSG3	1q-Amp	0.557	1
HSD11B1	Amp_15q26.2	0.557	1
KCND2	Del_1p36.31	0.557	1
MYO3B	Amp_12q14.1	0.557	1
MYO3B	Del_16p13.3	0.557	1
8q-Amp	17p-Del	0.557	1
APCS	20q-Amp	0.558	1
APCS	Amp_5p15.33	0.558	1
BTK	IDH1	0.558	1
BTK	ZFX	0.558	1
C10orf54	7p-Amp	0.558	1
CDK4	TPTE	0.558	1
CDKN2A	LGR6	0.558	1
IDH1	ZFX	0.558	1
IDH1	Amp_4q12	0.558	1
IDH1	Amp_12q15	0.558	1
IGF1R	20q-Amp	0.558	1
IGF1R	Amp_5p15.33	0.558	1
NUP214	Amp_4q12	0.558	1
PTPN11	7p-Amp	0.558	1
7p-Amp	Amp_13q31.3	0.558	1
16q-Del	Amp_1q21.3	0.558	1
ACSBG1	Del_10q23.31	0.559	1
CNTN5	Del_10q21.1	0.559	1
FRMPD4	10q-Del	0.559	1
PDGFRA	Del_16q23.1	0.559	1
EPHA4	PTEN	0.56	1
EPHA4	22q-Amp	0.56	1
MPP7	5q-Del	0.56	1
20q-Amp	Del_12q23.3	0.56	1
22q-Amp	Amp_11q13.3	0.56	1
Amp_5p15.33	Del_12q23.3	0.56	1
CAMTA1	NGF	0.561	1
CAMTA1	RB1	0.561	1
CDK4	Del_12q23.3	0.561	1
CYP3A5	10p-Del	0.561	1
DDX3X	10p-Del	0.561	1
MYO16	PTEN	0.561	1
NAP1L2	NGF	0.561	1
NAP1L2	OR6C74	0.561	1
NAP1L2	RB1	0.561	1
NGF	22q-Amp	0.561	1
NUDT11	Del_12q23.3	0.561	1
NUDT11	Del_13q34	0.561	1
OR6C74	PTEN	0.561	1
OR6C74	22q-Amp	0.561	1
OXA1L	Del_12q23.3	0.561	1
OXA1L	Del_13q34	0.561	1
PPP6C	10p-Del	0.561	1
PTEN	RB1	0.561	1
PTEN	SLC38A4	0.561	1
RQCD1	22q-Amp	0.561	1
S100A8	Del_13q34	0.561	1
SELP	22q-Amp	0.561	1
Amp_4q12	Amp_8q24.21	0.561	1
ARID2	CCK	0.562	1
ARID2	KRAS	0.562	1
BRAF	Del_16q24.3	0.562	1
C7orf58	CCK	0.562	1
C7orf58	FAM58A	0.562	1
C7orf58	GNAQ	0.562	1
EPHA7	Del_16q23.1	0.562	1
EZH2	THSD7B	0.562	1
FAM58A	Del_5q12.1	0.562	1
GNAQ	Del_5q12.1	0.562	1
KIT	THSD7B	0.562	1
MYO3B	11q-Del	0.562	1
SELP	Del_16q23.1	0.562	1
Amp_8q24.21	Del_16q23.1	0.562	1
BRAF	TP53	0.563	1
C10orf28	MPP7	0.563	1
C10orf28	Amp_17q25.3	0.563	1
C10orf28	Del_4p16.3	0.563	1
EMG1	MPP7	0.563	1
EMG1	Del_1p22.1	0.563	1
SLC27A5	Amp_1q44	0.563	1
USP17L2	Del_19p13.3	0.563	1
9q-Del	Del_15q21.1	0.563	1
Amp_13q31.3	Del_3q13.31	0.563	1
Amp_13q31.3	Del_19p13.3	0.563	1
ANO4	BRAF	0.564	1
C15orf23	CCNA1	0.564	1
C15orf23	CDC42BPA	0.564	1
C15orf23	RIPK4	0.564	1
CTNNB1	SELP	0.564	1
CTNNB1	SLC38A4	0.564	1
EPHA7	KYNU	0.564	1
EZH2	PARM1	0.564	1
EZH2	Del_6q26	0.564	1
GLI1	GUCY2F	0.564	1
GLI1	13q-Amp	0.564	1
GLI1	Del_6q26	0.564	1
KIT	13q-Amp	0.564	1
KRT73	Del_6q26	0.564	1
RIPK4	13q-Amp	0.564	1
RIPK4	Del_6q26	0.564	1
COL3A1	13q-Amp	0.565	1
COL3A1	7p-Amp	0.565	1
PARM1	11q-Del	0.565	1
EPHA6	Del_8p23.3	0.566	1
Amp_5p15.33	Del_16q23.1	0.566	1
CDKN2A	Del_16q12.1	0.567	1
KRAS	10p-Del	0.567	1
MSTN	Del_6q21	0.567	1
RB1	7q-Amp	0.567	1
RQCD1	7q-Amp	0.567	1
SLC27A5	Del_6q21	0.567	1
ZNF780B	Del_6q21	0.567	1
7q-Amp	Del_16q24.3	0.567	1
ALPK2	10q-Del	0.568	1
ALPK2	Del_3q13.31	0.568	1
APC	Amp_17q25.3	0.568	1
CDC42BPA	6p-Amp	0.568	1
EZH2	SLC9A11	0.568	1
GLI1	6p-Amp	0.568	1
GUCY2F	Del_13q34	0.568	1
PARM1	Del_12q23.3	0.568	1
PTPN22	Del_4p16.3	0.568	1
THSD7B	22q-Amp	0.568	1
13q-Amp	Del_12q23.3	0.568	1
8p-Amp	Amp_17q25.3	0.568	1
10q-Del	Amp_22q13.2	0.568	1
ALPK2	Del_16q23.1	0.569	1
BRAF	Del_8p23.3	0.569	1
CAMTA1	Del_5q31.3	0.569	1
COL3A1	HSD11B1	0.569	1
DMC1	DSG3	0.569	1
DMC1	EPHA4	0.569	1
FRMPD4	Del_15q13.3	0.569	1
GML	11p-Del	0.569	1
GML	6p-Del	0.569	1
GML	Amp_11q13.3	0.569	1
HSD11B1	11q-Del	0.569	1
ACSBG1	9p-Del	0.57	1
APCS	9p-Del	0.57	1
C10orf28	Amp_8q24.21	0.57	1
EMG1	Amp_8q24.21	0.57	1
HSD11B1	NF1	0.57	1
STK19	Del_8p23.3	0.57	1
STK19	Del_15q21.1	0.57	1
USH2A	11p-Del	0.57	1
9p-Del	Del_3q13.31	0.57	1
POTEG	Del_14q23.3	0.571	1
POTEG	Del_16q12.1	0.571	1
Del_2q37.3	Del_14q23.3	0.571	1
APCS	CDKN2A	0.572	1
CAMTA1	Del_9p23	0.572	1
CDKN2A	CYP3A5	0.572	1
CDKN2A	IGF1R	0.572	1
EPHA6	Del_2q37.3	0.572	1
KCND2	Del_2q37.3	0.572	1
NF1	Amp_13q31.3	0.572	1
USH2A	Amp_7q34	0.572	1
USP17L2	Del_15q21.1	0.572	1
ANO4	9q-Del	0.573	1
APCS	Del_16p13.3	0.573	1
C7orf58	Del_6q21	0.573	1
CCK	Del_8p23.3	0.573	1
CDKN2A	5q-Del	0.573	1
GML	Del_9p23	0.573	1
GNAQ	Del_8p23.3	0.573	1
KRAS	Del_15q21.1	0.573	1
KRTAP5-10	Amp_6p24.3	0.573	1
MAN1A1	6q-Del	0.573	1
SYK	Amp_12q14.1	0.573	1
SYK	Del_16p13.3	0.573	1
C10orf54	FRMPD4	0.574	1
CDK4	FRMPD4	0.574	1
COL3A1	10q-Del	0.574	1
FRMPD4	PTPN11	0.574	1
GML	6q-Del	0.574	1
NBPF1	7p-Amp	0.574	1
TPTE	20p-Amp	0.574	1
TPTE	Del_2q37.3	0.574	1
C10orf28	MYO16	0.575	1
EMG1	EPHA7	0.575	1
EMG1	SELP	0.575	1
EMG1	SLC38A4	0.575	1
EPHA4	Amp_6p24.3	0.575	1
TRERF1	Del_10p15.3	0.575	1
APC	CBL	0.576	1
APC	OR6C74	0.576	1
APC	RB1	0.576	1
APCS	TPTE	0.576	1
CBL	TRERF1	0.576	1
CBL	USH2A	0.576	1
CBL	Del_5p15.31	0.576	1
CPA3	20p-Amp	0.576	1
CPA3	Del_2q37.3	0.576	1
CPA3	Del_14q23.3	0.576	1
CYP3A5	7p-Amp	0.576	1
DDX3X	FGFR2	0.576	1
DDX3X	Del_2q37.3	0.576	1
DDX3X	Del_16q12.1	0.576	1
FGFR2	PPP6C	0.576	1
FGFR2	6q-Del	0.576	1
IGF1R	TPTE	0.576	1
MLL	Amp_11q13.3	0.576	1
NBPF1	PPP6C	0.576	1
NGF	TRERF1	0.576	1
NGF	Del_5p15.31	0.576	1
NGF	Del_10q21.1	0.576	1
OR6C74	PTPN22	0.576	1
OR6C74	8p-Amp	0.576	1
OR6C74	Del_5p15.31	0.576	1
PDGFRA	RB1	0.576	1
POTEG	PPP6C	0.576	1
POTEG	Amp_6q12	0.576	1
PPP6C	Del_14q23.3	0.576	1
RAC1	20p-Amp	0.576	1
RB1	TRERF1	0.576	1
RB1	USH2A	0.576	1
RB1	8p-Amp	0.576	1
RQCD1	8p-Amp	0.576	1
THSD7B	Del_8p23.3	0.576	1
20p-Amp	Amp_6q12	0.576	1
20q-Amp	6p-Del	0.576	1
7q-Amp	5q-Del	0.576	1
Amp_3p13	Del_16p13.3	0.576	1
Amp_6q12	Del_2q37.3	0.576	1
Amp_6q12	Del_16q12.1	0.576	1
CTNNB1	Del_10q23.31	0.577	1
FLT1	20q-Amp	0.577	1
FLT1	Amp_5p15.33	0.577	1
RB1	11q-Del	0.577	1
RQCD1	11q-Del	0.577	1
9q-Del	Amp_7q34	0.577	1
CDKN2A	7p-Amp	0.578	1
KEL	Amp_4q12	0.578	1
KEL	Amp_12q15	0.578	1
NAP1L2	Amp_1q44	0.578	1
NUP214	Del_4q34.3	0.578	1
TP53	Amp_3p13	0.578	1
ZFX	Del_1p36.31	0.578	1
ZFX	Del_4q34.3	0.578	1
Amp_4q12	Del_4q34.3	0.578	1
Amp_7q34	Del_5q31.3	0.578	1
Amp_15q26.2	Del_10p15.3	0.578	1
C7orf58	Del_15q13.3	0.579	1
CNTN5	11p-Del	0.579	1
CPA3	Del_5q31.3	0.579	1
EPHA6	6p-Amp	0.579	1
HSD11B1	OR4S2	0.579	1
PDGFRA	6p-Amp	0.579	1
SLC9A11	Del_5p15.31	0.579	1
6p-Amp	Del_5p15.31	0.579	1
Amp_1q44	Del_1p36.31	0.579	1
Amp_17q25.3	Del_10q21.1	0.579	1
C15orf23	1q-Amp	0.58	1
NAP1L2	Del_6q26	0.58	1
PTEN	Del_9p21.3	0.58	1
1q-Amp	Del_3q13.31	0.58	1
APC	BRAF	0.581	1
BRAF	PTPN22	0.581	1
MYO3B	1q-Amp	0.581	1
TP63	Amp_6p24.3	0.581	1
USP9X	Del_4p16.3	0.581	1
BTK	MAP2K1	0.582	1
CNTN5	USP9X	0.582	1
CTNNB1	MAN1A1	0.582	1
CTNNB1	Amp_12q15	0.582	1
EMG1	Del_6q26	0.582	1
IDH1	KYNU	0.582	1
KYNU	ZFX	0.582	1
MAP2K1	16q-Del	0.582	1
MAP2K1	Amp_12q15	0.582	1
PDGFRA	Amp_11q13.3	0.582	1
PTPN22	6p-Del	0.582	1
TRERF1	Amp_11q13.3	0.582	1
Amp_11q13.3	Del_5p15.31	0.582	1
ACSBG1	NRAS	0.583	1
APCS	NRAS	0.583	1
ATP5F1	Amp_1p12	0.583	1
CCK	Amp_1p12	0.583	1
CCNA1	CPA3	0.583	1
CCNA1	RAC1	0.583	1
CDC42BPA	DDX3X	0.583	1
CPA3	EZH2	0.583	1
DDX3X	KRT73	0.583	1
DDX3X	RIPK4	0.583	1
DDX3X	Amp_7p22.1	0.583	1
EZH2	LGR6	0.583	1
EZH2	Amp_6q12	0.583	1
FAM58A	Del_15q13.3	0.583	1
GLI1	LGR6	0.583	1
GLI1	PPP6C	0.583	1
GNAQ	Amp_1p12	0.583	1
KIT	LGR6	0.583	1
KIT	RAC1	0.583	1
KIT	Amp_6q12	0.583	1
KRAS	Amp_1p12	0.583	1
NF1	Amp_7q34	0.583	1
RAC1	Amp_7p22.1	0.583	1
USH2A	7q-Amp	0.583	1
ANO4	Del_8p23.3	0.584	1
BRAF	Del_3q13.31	0.584	1
C7orf58	NRAS	0.584	1
CAMTA1	16q-Del	0.584	1
CNTN5	Del_10q26.3	0.584	1
FLT1	Amp_17q25.3	0.584	1
FLT1	Del_4p16.3	0.584	1
MSTN	Del_19p13.3	0.584	1
SLC27A5	Del_3q13.31	0.584	1
ZNF780B	Del_3q13.31	0.584	1
ZNF780B	Del_19p13.3	0.584	1
HSD11B1	Amp_1p12	0.585	1
MYO16	6p-Amp	0.585	1
MYO3B	Del_16q24.3	0.585	1
NGF	THSD7B	0.585	1
RQCD1	THSD7B	0.585	1
STK19	Del_15q13.3	0.585	1
APCS	Del_14q23.3	0.586	1
DSG3	Del_3q13.31	0.586	1
IGF1R	Del_14q23.3	0.586	1
IGF1R	Del_16q12.1	0.586	1
MAN1A1	Amp_1q21.3	0.586	1
NAP1L2	7q-Amp	0.586	1
SYK	Del_14q23.3	0.586	1
TP53	Del_3q13.31	0.586	1
ZFX	Amp_1q21.3	0.586	1
9q-Del	Amp_4q12	0.586	1
ALPK2	6q-Del	0.587	1
C10orf28	Amp_1q21.3	0.587	1
C10orf54	CNTN5	0.587	1
C10orf54	Amp_3p13	0.587	1
CDK4	CNTN5	0.587	1
CNTN5	NUDT11	0.587	1
DMC1	USP17L2	0.587	1
EMG1	Amp_1q21.3	0.587	1
GML	USP17L2	0.587	1
GML	Amp_13q31.3	0.587	1
NUDT11	Amp_3p13	0.587	1
USP9X	Del_16q24.3	0.587	1
C15orf23	FRMPD4	0.588	1
C15orf23	Amp_1q21.3	0.588	1
CPA3	Del_6q26	0.588	1
CYP3A4	NRAS	0.588	1
GUCY2F	9q-Del	0.588	1
HRAS	Amp_8q24.21	0.588	1
HRAS	Del_9p21.3	0.588	1
KCND2	10p-Del	0.588	1
TPTE	Amp_17q25.3	0.588	1
1q-Amp	Del_9p23	0.588	1
Amp_20q13.33	Del_16q24.3	0.589	1
Amp_22q13.2	Del_16q24.3	0.589	1
CBL	DCLK3	0.59	1
CBL	NBPF1	0.59	1
DCLK3	RQCD1	0.59	1
FGFR2	NGF	0.59	1
FGFR2	OR6C74	0.59	1
MYO16	Del_5p15.31	0.59	1
NBPF1	NGF	0.59	1
NBPF1	RB1	0.59	1
NGF	20p-Amp	0.59	1
OR6C74	POTEG	0.59	1
OR6C74	20p-Amp	0.59	1
POTEG	RQCD1	0.59	1
RB1	20p-Amp	0.59	1
RB1	18p-Del	0.59	1
RB1	Del_2q37.3	0.59	1
RQCD1	20p-Amp	0.59	1
SLC38A4	Del_5p15.31	0.59	1
USH2A	Del_14q23.3	0.59	1
XIRP2	1q-Amp	0.59	1
BRAF	CYP3A4	0.591	1
BRAF	DDX3X	0.591	1
BRAF	LGR6	0.591	1
CYP3A5	Del_6q21	0.591	1
EPHA6	Del_16q24.3	0.591	1
MYO3B	20q-Amp	0.591	1
OR4S2	10p-Del	0.591	1
RELN	9q-Del	0.591	1
SLC9A11	17p-Del	0.591	1
POTEG	Del_16q23.1	0.592	1
XIRP2	6q-Del	0.592	1
ATP5F1	20q-Amp	0.593	1
ATP5F1	17p-Del	0.593	1
CCK	20q-Amp	0.593	1
CCK	17p-Del	0.593	1
COL3A1	8q-Amp	0.593	1
CTNNB1	Amp_7p22.1	0.593	1
FAM58A	MLL	0.593	1
FAM58A	17p-Del	0.593	1
GNAQ	MLL	0.593	1
GNAQ	17p-Del	0.593	1
KRAS	MLL	0.593	1
KRAS	17p-Del	0.593	1
POTEG	Amp_1q21.3	0.593	1
XIRP2	Del_1p36.31	0.593	1
XIRP2	Del_4q34.3	0.593	1
7q-Amp	Del_Xp21.1	0.593	1
ACSBG1	C15orf23	0.594	1
APCS	GUCY2F	0.594	1
APCS	13q-Amp	0.594	1
ARID2	IDH1	0.594	1
ARID2	ZFX	0.594	1
ARID2	Amp_12q15	0.594	1
BTK	14q-Del	0.594	1
BTK	Del_5q12.1	0.594	1
BTK	Del_5q31.3	0.594	1
C15orf23	CYP3A5	0.594	1
CDKN2A	6p-Del	0.594	1
CYP3A5	13q-Amp	0.594	1
DDX3X	Del_16q23.1	0.594	1
GML	TP63	0.594	1
GML	Del_16q24.3	0.594	1
GUCY2F	IGF1R	0.594	1
GUCY2F	SYK	0.594	1
HSD11B1	Amp_6p24.3	0.594	1
IGF1R	PARM1	0.594	1
NUP214	Del_5q12.1	0.594	1
RAC1	Del_16q23.1	0.594	1
RPTN	Del_14q23.3	0.594	1
SYK	13q-Amp	0.594	1
ZFX	Del_5q12.1	0.594	1
ANO4	Amp_7q34	0.595	1
C10orf28	Amp_7q34	0.595	1
COL3A1	20q-Amp	0.595	1
CYP3A4	7q-Amp	0.595	1
DCLK3	NRAS	0.595	1
FGFR2	Amp_17q25.3	0.595	1
MLL	11q-Del	0.595	1
MPP7	20p-Amp	0.595	1
NBPF1	Amp_17q25.3	0.595	1
POTEG	Del_4p16.3	0.595	1
20p-Amp	Amp_17q25.3	0.595	1
ARID2	Del_9p23	0.596	1
FLT1	Del_19p13.3	0.596	1
KEL	Del_19p13.3	0.596	1
XIRP2	Amp_3p13	0.596	1
CPA3	Del_13q34	0.597	1
KRAS	Del_10p15.3	0.597	1
SLC9A11	Amp_22q13.2	0.597	1
1q-Amp	9p-Del	0.597	1
Amp_6q12	Del_12q23.3	0.597	1
C10orf28	5q-Del	0.598	1
EMG1	5q-Del	0.598	1
EPHA6	Amp_13q31.3	0.598	1
RELN	Amp_1q44	0.598	1
Amp_3p13	Del_15q13.3	0.598	1
Amp_7q34	Amp_12q15	0.598	1
CTNNB1	5q-Del	0.599	1
DSG3	Amp_12q14.1	0.599	1
KCND2	Del_12q23.3	0.599	1
5q-Del	Amp_15q26.2	0.599	1
Amp_1q44	Amp_12q14.1	0.599	1
Amp_1q44	Del_16p13.3	0.599	1
DSG3	Amp_8q24.21	0.6	1
EPHA7	Del_6q26	0.6	1
HRAS	9q-Del	0.6	1
IDH1	Del_6q26	0.6	1
MLL	Amp_8q24.21	0.6	1
NUP214	Del_6q26	0.6	1
PTEN	SLC27A5	0.6	1
RELN	Del_16q23.1	0.6	1
SELP	Del_6q26	0.6	1
SLC27A5	22q-Amp	0.6	1
SLC38A4	Del_6q26	0.6	1
STK19	17p-Del	0.6	1
STK19	Amp_5p15.33	0.6	1
SYK	Del_16q23.1	0.6	1
TPTE	14q-Del	0.6	1
TPTE	Del_5q12.1	0.6	1
XIRP2	9p-Del	0.6	1
7p-Amp	Del_5q12.1	0.6	1
11q-Del	Amp_3p13	0.6	1
BRAF	Amp_15q26.2	0.601	1
CDKN2A	KEL	0.601	1
STK19	Del_16p13.3	0.601	1
XIRP2	Del_19p13.3	0.601	1
13q-Amp	Amp_7q34	0.601	1
Amp_7p22.1	Del_5q12.1	0.601	1
Amp_8q24.21	Del_4q34.3	0.601	1
CCNA1	6p-Del	0.602	1
DSG3	14q-Del	0.602	1
DSG3	Del_5q12.1	0.602	1
GLI1	6p-Del	0.602	1
GLI1	Amp_11q13.3	0.602	1
KIT	6p-Del	0.602	1
KIT	Amp_11q13.3	0.602	1
RIPK4	6p-Del	0.602	1
ALPK2	PTEN	0.603	1
ALPK2	22q-Amp	0.603	1
CDK4	Del_10q26.3	0.603	1
CDKN2A	FAM58A	0.603	1
CDKN2A	GNAQ	0.603	1
NAP1L2	Amp_20q13.33	0.603	1
NUDT11	Del_10q26.3	0.603	1
OXA1L	Del_10q26.3	0.603	1
PTEN	Amp_20q13.33	0.603	1
9q-Del	Amp_1p12	0.603	1
9q-Del	Amp_8q24.21	0.603	1
ACSBG1	Del_10p15.3	0.604	1
ALPK2	Amp_6p24.3	0.604	1
APCS	Del_10p15.3	0.604	1
C7orf58	17p-Del	0.604	1
CBL	Del_13q34	0.604	1
CNTN5	Del_9p21.3	0.604	1
CYP3A5	Del_10p15.3	0.604	1
IGF1R	Del_10p15.3	0.604	1
KCND2	Del_15q21.1	0.604	1
NGF	Del_13q34	0.604	1
OR6C74	Del_13q34	0.604	1
PARM1	9p-Del	0.604	1
POTEG	6p-Del	0.604	1
RQCD1	Del_12q23.3	0.604	1
13q-Amp	9p-Del	0.604	1
20p-Amp	Amp_11q13.3	0.604	1
20q-Amp	Del_5q12.1	0.604	1
18p-Del	Amp_11q13.3	0.604	1
6p-Del	Del_2q37.3	0.604	1
Amp_4q12	Del_11q23.3	0.604	1
CAMTA1	5q-Del	0.605	1
IDH1	OR4S2	0.605	1
IDH1	USP9X	0.605	1
MAN1A1	OR4S2	0.605	1
OR4S2	Amp_4q12	0.605	1
OR4S2	Amp_12q15	0.605	1
TTN	Amp_20q13.33	0.605	1
USP9X	ZFX	0.605	1
USP9X	Amp_4q12	0.605	1
22q-Amp	5q-Del	0.605	1
SELP	Amp_7p22.1	0.606	1
USH2A	8p-Amp	0.606	1
Amp_20q13.33	Del_5q31.3	0.606	1
ALPK2	KIT	0.607	1
BRAF	STK19	0.607	1
BTK	7q-Amp	0.607	1
CCNA1	Amp_20q13.33	0.607	1
CDC42BPA	Amp_20q13.33	0.607	1
CTNNB1	MAP2K1	0.607	1
CTNNB1	Amp_15q26.2	0.607	1
GLI1	Amp_22q13.2	0.607	1
KRT73	Amp_22q13.2	0.607	1
MAP2K1	Amp_15q26.2	0.607	1
7q-Amp	Amp_4q12	0.607	1
7q-Amp	Amp_12q15	0.607	1
Amp_8q24.21	Del_3q13.31	0.607	1
C7orf58	Del_1p22.1	0.608	1
CCNA1	Amp_7p22.1	0.608	1
EPHA6	Del_12q23.3	0.608	1
EPHA6	Del_13q34	0.608	1
GUCY2F	Amp_3p13	0.608	1
KIT	Amp_7p22.1	0.608	1
MPP7	14q-Del	0.608	1
OR6C74	RELN	0.608	1
PTPN22	Del_5q31.3	0.608	1
RIPK4	Amp_7p22.1	0.608	1
SELP	Amp_1q44	0.608	1
TRERF1	Del_5q31.3	0.608	1
13q-Amp	Amp_3p13	0.608	1
Amp_17q25.3	Del_5q12.1	0.608	1
Amp_22q13.2	Del_15q21.1	0.608	1
C10orf28	KEL	0.609	1
EMG1	FLT1	0.609	1
EMG1	Del_1p36.31	0.609	1
NBPF1	Amp_7q34	0.609	1
POTEG	Amp_7q34	0.609	1
USP17L2	Del_5p15.31	0.609	1
CYP3A4	11q-Del	0.61	1
MAN1A1	Del_15q21.1	0.61	1
MYO3B	Amp_6p24.3	0.61	1
NF1	Amp_12q15	0.61	1
NUP214	Del_15q21.1	0.61	1
PPP6C	11q-Del	0.61	1
RAC1	11q-Del	0.61	1
USP17L2	Amp_5p15.33	0.61	1
ZFX	Del_8p23.3	0.61	1
ZFX	Del_15q21.1	0.61	1
11q-Del	Amp_6q12	0.61	1
Amp_12q15	Del_8p23.3	0.61	1
CCK	USH2A	0.611	1
GNAQ	Del_10q21.1	0.611	1
MYO16	Del_4q34.3	0.611	1
SELP	10q-Del	0.611	1
SLC38A4	Del_1p36.31	0.611	1
SLC38A4	Del_4q34.3	0.611	1
APC	16q-Del	0.612	1
C10orf54	Del_1p22.1	0.612	1
CBL	Del_9p23	0.612	1
CNTN5	CYP3A5	0.612	1
EPHA4	Del_16q12.1	0.612	1
FAM58A	RPTN	0.612	1
GNAQ	Del_16q12.1	0.612	1
KRAS	RPTN	0.612	1
KRAS	Del_16q12.1	0.612	1
MPP7	NUDT11	0.612	1
MPP7	PTPN11	0.612	1
NGF	Del_9p23	0.612	1
NUDT11	Del_4p16.3	0.612	1
OR6C74	Del_9p23	0.612	1
OXA1L	Amp_17q25.3	0.612	1
OXA1L	Del_4p16.3	0.612	1
PDGFRA	16q-Del	0.612	1
PTPN11	Amp_17q25.3	0.612	1
RQCD1	Del_9p23	0.612	1
S100A8	Del_4p16.3	0.612	1
TPTE	Del_14q23.3	0.612	1
TTN	Amp_12q15	0.612	1
8p-Amp	16q-Del	0.612	1
10q-Del	Amp_3p13	0.612	1
Amp_6p24.3	Del_16p13.3	0.612	1
Amp_11q13.3	Del_16q12.1	0.612	1
ACSBG1	RAC1	0.613	1
ANO4	Del_15q13.3	0.613	1
APCS	Amp_6q12	0.613	1
CTNNB1	THSD7B	0.613	1
CYP3A4	CYP3A5	0.613	1
CYP3A5	LGR6	0.613	1
IGF1R	RAC1	0.613	1
LGR6	SYK	0.613	1
PPP6C	SYK	0.613	1
SYK	Amp_6q12	0.613	1
ANO4	Del_11q23.3	0.614	1
APCS	6p-Amp	0.614	1
CYP3A5	6p-Amp	0.614	1
EZH2	Del_11q23.3	0.614	1
GLI1	Del_11q23.3	0.614	1
IGF1R	SLC9A11	0.614	1
KCND2	Amp_7q34	0.614	1
KIT	Del_11q23.3	0.614	1
MPP7	Del_16p13.3	0.614	1
USH2A	6q-Del	0.614	1
Amp_12q14.1	Del_1p22.1	0.614	1
APC	KRTAP5-10	0.615	1
BRAF	CDC42BPA	0.615	1
DDX3X	Del_10p15.3	0.615	1
KRTAP5-10	Del_5p15.31	0.615	1
MSTN	8p-Amp	0.615	1
MSTN	Del_5p15.31	0.615	1
SLC27A5	TRERF1	0.615	1
SLC27A5	Del_5p15.31	0.615	1
ZNF780B	8p-Amp	0.615	1
7p-Amp	Del_12q23.3	0.615	1
Amp_6q12	Del_10p15.3	0.615	1
Amp_15q26.2	Del_1p36.31	0.615	1
C7orf58	Del_19p13.3	0.616	1
TP53	Del_16q24.3	0.616	1
TP63	Del_14q23.3	0.616	1
20q-Amp	Del_9p21.3	0.616	1
Amp_5p15.33	Del_9p21.3	0.616	1
CYP3A4	FRMPD4	0.617	1
DDX3X	FRMPD4	0.617	1
TP63	Del_1p36.31	0.617	1
TP63	Del_4q34.3	0.617	1
TTN	Del_1p36.31	0.617	1
8q-Amp	Del_1p36.31	0.617	1
8q-Amp	Del_4q34.3	0.617	1
CBL	FRMPD4	0.618	1
CBL	MYO3B	0.618	1
FRMPD4	OR6C74	0.618	1
FRMPD4	RB1	0.618	1
FRMPD4	RQCD1	0.618	1
GNAQ	THSD7B	0.618	1
MSTN	Del_5q31.3	0.618	1
MYO16	20p-Amp	0.618	1
SLC27A5	Del_5q31.3	0.618	1
STK19	Del_10q26.3	0.618	1
8q-Amp	Amp_3p13	0.618	1
CDK4	Del_10q23.31	0.619	1
EMG1	14q-Del	0.619	1
EMG1	Del_5q12.1	0.619	1
EZH2	USP17L2	0.619	1
GLI1	Amp_13q31.3	0.619	1
KIT	Amp_13q31.3	0.619	1
NUDT11	Del_10q23.31	0.619	1
OXA1L	Del_10q23.31	0.619	1
RIPK4	Amp_13q31.3	0.619	1
9p-Del	Amp_13q31.3	0.619	1
BTK	11q-Del	0.62	1
COL3A1	IDH1	0.62	1
COL3A1	Amp_12q15	0.62	1
DMC1	Del_19p13.3	0.62	1
EZH2	TP53	0.62	1
EZH2	11p-Del	0.62	1
GML	Del_3q13.31	0.62	1
MSTN	Del_6q26	0.62	1
SLC27A5	Del_6q26	0.62	1
ZNF780B	Del_6q26	0.62	1
11q-Del	Amp_12q15	0.62	1
Amp_17q25.3	Amp_22q13.2	0.62	1
Amp_22q13.2	Del_10p15.3	0.62	1
COL3A1	Del_10q21.1	0.621	1
NRAS	ZNF780B	0.621	1
PTEN	1q-Amp	0.621	1
SLC9A11	6q-Del	0.621	1
STK19	13q-Amp	0.621	1
ARID2	Del_5q31.3	0.622	1
ATP5F1	Del_16q23.1	0.622	1
CAMTA1	Amp_7p22.1	0.622	1
GNAQ	Del_16q23.1	0.622	1
KRAS	Del_16q23.1	0.622	1
NAP1L2	11p-Del	0.622	1
8q-Amp	Del_3q13.31	0.622	1
Amp_11q13.3	Del_5q31.3	0.622	1
ALPK2	7p-Amp	0.623	1
TPTE	Amp_20q13.33	0.623	1
13q-Amp	Amp_22q13.2	0.623	1
CDK4	SELP	0.624	1
MYO16	NUDT11	0.624	1
MYO16	PTPN11	0.624	1
NUDT11	SLC38A4	0.624	1
PTPN11	SLC38A4	0.624	1
BRAF	ZNF780B	0.625	1
BRAF	Amp_22q13.2	0.625	1
CNTN5	Del_1p36.31	0.625	1
CTNNA3	Amp_3p13	0.625	1
EPHA4	Del_12q23.3	0.625	1
EPHA4	Del_13q34	0.625	1
FLT1	Del_16q12.1	0.625	1
MAN1A1	Del_15q13.3	0.625	1
MYO16	7p-Amp	0.625	1
NUP214	Amp_1p12	0.625	1
NUP214	Del_15q13.3	0.625	1
RPTN	Del_4q34.3	0.625	1
SLC38A4	Amp_6p24.3	0.625	1
ZFX	Del_15q13.3	0.625	1
1q-Amp	Amp_6q12	0.625	1
Amp_11q13.3	Del_12q23.3	0.625	1
CNTN5	20p-Amp	0.626	1
COL3A1	Del_6q26	0.626	1
CYP3A5	Del_10q21.1	0.626	1
FLT1	22q-Amp	0.626	1
KEL	PTEN	0.626	1
NAP1L2	Del_4q34.3	0.626	1
TRERF1	7q-Amp	0.626	1
22q-Amp	Del_1p36.31	0.626	1
10q-Del	Amp_4q12	0.626	1
10q-Del	Amp_12q15	0.626	1
Amp_6q12	Del_9p21.3	0.626	1
CBL	7p-Amp	0.627	1
CDK4	9p-Del	0.627	1
HRAS	Amp_1q44	0.627	1
NRAS	Del_8p23.3	0.627	1
NUP214	Amp_12q14.1	0.627	1
RB1	7p-Amp	0.627	1
RQCD1	TPTE	0.627	1
RQCD1	7p-Amp	0.627	1
SELP	Del_10q21.1	0.627	1
ZFX	Amp_12q14.1	0.627	1
C10orf28	Amp_1q44	0.628	1
EMG1	Del_9p21.3	0.628	1
KRTAP5-10	7q-Amp	0.628	1
MSTN	7q-Amp	0.628	1
RPTN	Del_9p21.3	0.628	1
SLC27A5	7q-Amp	0.628	1
STK19	10p-Del	0.628	1
ZNF780B	7q-Amp	0.628	1
CBL	Del_11q23.3	0.629	1
EZH2	Amp_8q24.21	0.629	1
HSD11B1	Del_14q23.3	0.629	1
HSD11B1	Del_16q12.1	0.629	1
8q-Amp	Amp_12q14.1	0.629	1
C10orf28	Del_8p23.3	0.63	1
C10orf28	Del_15q21.1	0.63	1
CTNNB1	USP9X	0.63	1
EMG1	Del_15q21.1	0.63	1
KRTAP5-10	NBPF1	0.63	1
KRTAP5-10	20p-Amp	0.63	1
KRTAP5-10	18p-Del	0.63	1
KYNU	OR4S2	0.63	1
MAP2K1	OR4S2	0.63	1
MAP2K1	USP9X	0.63	1
MLL	Del_8p23.3	0.63	1
MLL	Del_15q21.1	0.63	1
MSTN	20p-Amp	0.63	1
MSTN	18p-Del	0.63	1
NBPF1	SLC27A5	0.63	1
POTEG	SLC27A5	0.63	1
POTEG	ZNF780B	0.63	1
SLC27A5	18p-Del	0.63	1
SLC27A5	Del_2q37.3	0.63	1
USP9X	Amp_15q26.2	0.63	1
XIRP2	7q-Amp	0.63	1
ZNF780B	20p-Amp	0.63	1
ZNF780B	18p-Del	0.63	1
17p-Del	Del_15q21.1	0.63	1
Amp_5p15.33	Del_8p23.3	0.63	1
ARID2	KYNU	0.631	1
CBL	CTNNA3	0.631	1
CBL	Amp_3p13	0.631	1
CCK	6p-Amp	0.631	1
COL3A1	Del_4q34.3	0.631	1
CTNNA3	OR6C74	0.631	1
CTNNA3	RQCD1	0.631	1
CTNNB1	14q-Del	0.631	1
DSG3	Del_15q21.1	0.631	1
GNAQ	SLC9A11	0.631	1
KEL	11q-Del	0.631	1
MAP2K1	Del_5q12.1	0.631	1
NBPF1	Amp_13q31.3	0.631	1
RQCD1	Amp_3p13	0.631	1
18p-Del	Amp_13q31.3	0.631	1
ACSBG1	6p-Del	0.632	1
APCS	6p-Del	0.632	1
CNTN5	Del_16p13.3	0.632	1
CYP3A5	EPHA4	0.632	1
CYP3A5	6p-Del	0.632	1
EPHA7	Del_16p13.3	0.632	1
MYO16	Amp_12q14.1	0.632	1
MYO16	Del_16p13.3	0.632	1
NAP1L2	9p-Del	0.632	1
PTPN11	Amp_7p22.1	0.632	1
SELP	Del_16p13.3	0.632	1
SLC38A4	Amp_12q14.1	0.632	1
SYK	Amp_11q13.3	0.632	1
TTN	Del_5q31.3	0.632	1
22q-Amp	9p-Del	0.632	1
CCNA1	10q-Del	0.633	1
EZH2	10q-Del	0.633	1
FRMPD4	Del_14q23.3	0.633	1
KRT73	10q-Del	0.633	1
TPTE	Del_10p15.3	0.633	1
TPTE	Del_Xp21.1	0.633	1
1q-Amp	Amp_4q12	0.633	1
1q-Amp	Amp_12q15	0.633	1
7p-Amp	Del_Xp21.1	0.633	1
OR4S2	5q-Del	0.634	1
TRERF1	5q-Del	0.634	1
USH2A	Del_9p23	0.634	1
USP9X	5q-Del	0.634	1
EPHA7	14q-Del	0.635	1
MLL	Del_9p23	0.635	1
MYO16	14q-Del	0.635	1
SLC38A4	Del_5q12.1	0.635	1
Amp_5p15.33	Del_9p23	0.635	1
ALPK2	Amp_1p12	0.636	1
CAMTA1	DMC1	0.636	1
EMG1	Amp_6p24.3	0.636	1
PTPN11	16q-Del	0.636	1
APC	Amp_20q13.33	0.637	1
ARID2	BRAF	0.637	1
CAMTA1	Del_3q13.31	0.637	1
CAMTA1	Del_19p13.3	0.637	1
CTNNA3	PPP6C	0.637	1
CYP3A4	Amp_3p13	0.637	1
DDX3X	Amp_3p13	0.637	1
FLT1	16q-Del	0.637	1
PTEN	Del_19p13.3	0.637	1
RQCD1	XIRP2	0.637	1
TRERF1	Amp_22q13.2	0.637	1
TTN	22q-Amp	0.637	1
C15orf23	11p-Del	0.638	1
DSG3	GUCY2F	0.638	1
EPHA7	Del_9p21.3	0.638	1
GML	9p-Del	0.638	1
GUCY2F	11p-Del	0.638	1
MPP7	Amp_1q21.3	0.638	1
NF1	Amp_7p22.1	0.638	1
Amp_1q21.3	Del_4p16.3	0.638	1
BRAF	CDK4	0.639	1
BRAF	NUDT11	0.639	1
BRAF	PTPN11	0.639	1
BRAF	S100A8	0.639	1
CDKN2A	Del_6q21	0.639	1
CPA3	Amp_1q21.3	0.639	1
CYP3A4	9q-Del	0.639	1
DDX3X	Amp_1q21.3	0.639	1
FLT1	9q-Del	0.639	1
KRTAP5-10	Del_10p15.3	0.639	1
SLC27A5	11q-Del	0.639	1
SLC27A5	Del_10p15.3	0.639	1
STK19	Del_10q23.31	0.639	1
Amp_1q21.3	Amp_6q12	0.639	1
Amp_1q21.3	Del_1p36.31	0.639	1
Amp_1q21.3	Del_4q34.3	0.639	1
BTK	20q-Amp	0.64	1
BTK	17p-Del	0.64	1
C10orf28	Del_15q13.3	0.64	1
CDC42BPA	6q-Del	0.64	1
EMG1	Del_15q13.3	0.64	1
EZH2	6q-Del	0.64	1
IDH1	MLL	0.64	1
IDH1	17p-Del	0.64	1
NUP214	20q-Amp	0.64	1
NUP214	Amp_5p15.33	0.64	1
RIPK4	6q-Del	0.64	1
SLC9A11	Del_9p21.3	0.64	1
TPTE	Del_9p21.3	0.64	1
XIRP2	Del_5q12.1	0.64	1
CPA3	STK19	0.641	1
DDX3X	STK19	0.641	1
HSD11B1	Amp_6q12	0.641	1
LGR6	STK19	0.641	1
SLC9A11	Del_6q26	0.641	1
TP53	Amp_17q25.3	0.641	1
8p-Amp	Del_9p23	0.641	1
APC	Amp_6p24.3	0.642	1
BRAF	Del_6q21	0.642	1
C10orf54	Del_6q21	0.642	1
CTNNB1	Del_5q31.3	0.642	1
MAP2K1	Del_5q31.3	0.642	1
Amp_6p24.3	Del_5p15.31	0.642	1
COL3A1	8p-Amp	0.643	1
CTNNB1	9q-Del	0.643	1
CTNNB1	Amp_1q21.3	0.643	1
PTPN22	Del_6q26	0.643	1
RELN	Del_11q23.3	0.643	1
SLC9A11	Amp_1q21.3	0.643	1
TRERF1	11q-Del	0.643	1
8p-Amp	Del_6q26	0.643	1
BRAF	SELP	0.644	1
BRAF	SLC38A4	0.644	1
CBL	KCND2	0.644	1
CCNA1	Del_16q24.3	0.644	1
CNTN5	Del_4p16.3	0.644	1
EPHA7	Del_13q34	0.644	1
EZH2	8q-Amp	0.644	1
EZH2	Del_16q24.3	0.644	1
GLI1	Del_16q24.3	0.644	1
KCND2	NGF	0.644	1
KCND2	RB1	0.644	1
KIT	TP63	0.644	1
KRT73	Del_16q24.3	0.644	1
KRTAP5-10	Del_12q23.3	0.644	1
MSTN	Del_12q23.3	0.644	1
MSTN	Del_13q34	0.644	1
OR6C74	Del_9p21.3	0.644	1
SELP	Del_13q34	0.644	1
SLC27A5	Del_12q23.3	0.644	1
SLC27A5	Del_13q34	0.644	1
ZNF780B	Del_13q34	0.644	1
C15orf23	Del_1p22.1	0.645	1
C15orf23	Del_4p16.3	0.645	1
COL3A1	NRAS	0.645	1
COL3A1	Amp_6p24.3	0.645	1
FRMPD4	Amp_11q13.3	0.645	1
GUCY2F	Amp_17q25.3	0.645	1
GUCY2F	Del_1p22.1	0.645	1
IDH1	Amp_1q44	0.645	1
MPP7	13q-Amp	0.645	1
NGF	10q-Del	0.645	1
USH2A	20q-Amp	0.645	1
13q-Amp	Del_1p22.1	0.645	1
7p-Amp	Del_16q23.1	0.645	1
Amp_1q44	Amp_12q15	0.645	1
Amp_5p15.33	Del_10q21.1	0.645	1
Del_2q37.3	Del_5q31.3	0.645	1
ARID2	Del_16q24.3	0.646	1
C7orf58	8q-Amp	0.646	1
CAMTA1	14q-Del	0.646	1
CAMTA1	Del_5q12.1	0.646	1
NAP1L2	Del_5q12.1	0.646	1
PTEN	14q-Del	0.646	1
PTPN22	Del_10q26.3	0.646	1
RPTN	Amp_13q31.3	0.646	1
TP63	14q-Del	0.646	1
USP17L2	Del_14q23.3	0.646	1
USP17L2	Del_16q12.1	0.646	1
16q-Del	Amp_7p22.1	0.646	1
C10orf54	5q-Del	0.647	1
CTNNB1	Del_8p23.3	0.647	1
CTNNB1	Del_15q21.1	0.647	1
EPHA4	6p-Amp	0.647	1
EPHA7	Del_6q21	0.647	1
MYO3B	Amp_17q25.3	0.647	1
MYO3B	Del_1p22.1	0.647	1
NF1	Amp_15q26.2	0.647	1
NUDT11	5q-Del	0.647	1
RELN	11q-Del	0.647	1
SELP	Del_6q21	0.647	1
BRAF	KCND2	0.648	1
BTK	GUCY2F	0.648	1
BTK	PARM1	0.648	1
C15orf23	IDH1	0.648	1
FLT1	Del_16q23.1	0.648	1
GUCY2F	IDH1	0.648	1
GUCY2F	MAN1A1	0.648	1
HRAS	10p-Del	0.648	1
USH2A	Amp_1q21.3	0.648	1
ZFX	13q-Amp	0.648	1
ANO4	CCK	0.649	1
ANO4	GNAQ	0.649	1
ANO4	KRAS	0.649	1
APCS	Amp_13q31.3	0.649	1
CYP3A5	Amp_13q31.3	0.649	1
GUCY2F	Del_9p23	0.649	1
KCND2	Amp_3p13	0.649	1
MSTN	1q-Amp	0.649	1
NUDT11	Amp_8q24.21	0.649	1
PTPN11	Amp_8q24.21	0.649	1
SLC27A5	1q-Amp	0.649	1
SYK	Amp_13q31.3	0.649	1
16q-Del	Amp_12q14.1	0.649	1
C10orf28	MLL	0.65	1
C10orf28	20q-Amp	0.65	1
C10orf28	Amp_5p15.33	0.65	1
CCNA1	9q-Del	0.65	1
CDC42BPA	Amp_1q21.3	0.65	1
EMG1	20q-Amp	0.65	1
EZH2	9q-Del	0.65	1
GLI1	9q-Del	0.65	1
HSD11B1	NRAS	0.65	1
KCND2	Del_16q24.3	0.65	1
KRT73	9q-Del	0.65	1
KRT73	Amp_1q21.3	0.65	1
OR4S2	Del_4q34.3	0.65	1
RIPK4	Amp_1q21.3	0.65	1
ANO4	Amp_20q13.33	0.651	1
ANO4	Del_2q37.3	0.651	1
APC	DMC1	0.651	1
CTNNB1	Amp_12q14.1	0.651	1
CTNNB1	Del_16p13.3	0.651	1
CYP3A5	Del_6q26	0.651	1
DMC1	PDGFRA	0.651	1
DMC1	PTPN22	0.651	1
DMC1	8p-Amp	0.651	1
GML	PDGFRA	0.651	1
GML	PTPN22	0.651	1
GML	Del_5p15.31	0.651	1
KYNU	Amp_12q14.1	0.651	1
KYNU	Del_16p13.3	0.651	1
MAP2K1	Del_16p13.3	0.651	1
MYO16	Amp_20q13.33	0.651	1
SELP	Amp_20q13.33	0.651	1
SELP	Amp_22q13.2	0.651	1
SLC38A4	Amp_22q13.2	0.651	1
7q-Amp	Amp_17q25.3	0.651	1
EPHA4	11q-Del	0.652	1
RPTN	14q-Del	0.652	1
Amp_13q31.3	Del_12q23.3	0.652	1
Amp_13q31.3	Del_13q34	0.652	1
APCS	Amp_20q13.33	0.653	1
APCS	Amp_22q13.2	0.653	1
CAMTA1	Amp_8q24.21	0.653	1
CCK	Del_11q23.3	0.653	1
CCNA1	Del_19p13.3	0.653	1
CYP3A4	Amp_7q34	0.653	1
CYP3A5	Amp_22q13.2	0.653	1
EZH2	Del_3q13.31	0.653	1
GLI1	Del_3q13.31	0.653	1
IGF1R	Amp_22q13.2	0.653	1
KIT	Del_3q13.31	0.653	1
KRT73	Del_19p13.3	0.653	1
MYO3B	Del_10q26.3	0.653	1
PPP6C	Amp_7q34	0.653	1
SLC9A11	Del_6q21	0.653	1
SYK	Amp_22q13.2	0.653	1
Amp_6q12	Amp_7q34	0.653	1
Amp_7q34	Del_3q13.31	0.653	1
ALPK2	11q-Del	0.654	1
APC	Del_4q34.3	0.654	1
CDKN2A	IDH1	0.654	1
CDKN2A	Amp_12q15	0.654	1
FRMPD4	Del_16q23.1	0.654	1
KCND2	1q-Amp	0.654	1
PPP6C	RELN	0.654	1
TP53	7p-Amp	0.654	1
TRERF1	Del_1p36.31	0.654	1
TTN	10p-Del	0.654	1
8p-Amp	Del_1p36.31	0.654	1
8p-Amp	Del_4q34.3	0.654	1
TRERF1	11p-Del	0.655	1
CBL	MPP7	0.656	1
GML	Del_6q21	0.656	1
KCND2	LGR6	0.656	1
MLL	Del_15q13.3	0.656	1
MPP7	NGF	0.656	1
MPP7	RQCD1	0.656	1
NGF	Amp_17q25.3	0.656	1
NUP214	Amp_6p24.3	0.656	1
OR6C74	Amp_17q25.3	0.656	1
OR6C74	Del_1p22.1	0.656	1
OR6C74	Del_4p16.3	0.656	1
RB1	Del_4p16.3	0.656	1
ARID2	Del_10q21.1	0.657	1
ATP5F1	Amp_20q13.33	0.657	1
ATP5F1	Amp_22q13.2	0.657	1
BRAF	Amp_8q24.21	0.657	1
C10orf54	6q-Del	0.657	1
CAMTA1	8q-Amp	0.657	1
CCK	Amp_22q13.2	0.657	1
FAM58A	Amp_20q13.33	0.657	1
FRMPD4	KRTAP5-10	0.657	1
FRMPD4	SLC27A5	0.657	1
GNAQ	Amp_22q13.2	0.657	1
HSD11B1	6p-Amp	0.657	1
KRTAP5-10	Del_10q21.1	0.657	1
PPP6C	Del_10q23.31	0.657	1
STK19	6p-Amp	0.657	1
USH2A	1q-Amp	0.657	1
USH2A	Del_2q37.3	0.657	1
22q-Amp	Del_16q24.3	0.657	1
Amp_11q13.3	Del_6q26	0.657	1
ARID2	10q-Del	0.658	1
ATP5F1	BRAF	0.658	1
BRAF	FAM58A	0.658	1
C10orf54	FLT1	0.658	1
COL3A1	Del_14q23.3	0.658	1
EPHA7	Del_8p23.3	0.658	1
EPHA7	Del_15q21.1	0.658	1
FLT1	NUDT11	0.658	1
GML	Del_9p21.3	0.658	1
KCND2	Del_9p23	0.658	1
KEL	NUDT11	0.658	1
NUDT11	Del_4q34.3	0.658	1
OXA1L	Del_1p36.31	0.658	1
OXA1L	Del_4q34.3	0.658	1
PARM1	Del_11q23.3	0.658	1
PTPN11	Del_4q34.3	0.658	1
RELN	Amp_12q15	0.658	1
SELP	Del_8p23.3	0.658	1
APC	Del_3q13.31	0.659	1
ARID2	Del_10q23.31	0.659	1
C7orf58	6q-Del	0.659	1
HRAS	NRAS	0.659	1
PDGFRA	1q-Amp	0.659	1
PDGFRA	Del_19p13.3	0.659	1
PTPN22	Del_19p13.3	0.659	1
Del_5p15.31	Del_19p13.3	0.659	1
C10orf28	CDKN2A	0.66	1
CPA3	Amp_22q13.2	0.66	1
GNAQ	XIRP2	0.66	1
PTEN	22q-Amp	0.66	1
STK19	Amp_11q13.3	0.66	1
TP53	7q-Amp	0.66	1
TTN	Del_12q23.3	0.66	1
TTN	Del_14q23.3	0.66	1
ALPK2	Del_10q21.1	0.661	1
EPHA7	6q-Del	0.661	1
EZH2	Amp_7q34	0.661	1
FLT1	Del_6q21	0.661	1
KEL	Del_6q21	0.661	1
SELP	6q-Del	0.661	1
USH2A	Amp_20q13.33	0.661	1
7p-Amp	16q-Del	0.661	1
5q-Del	Del_2q37.3	0.661	1
Amp_22q13.2	Del_6q26	0.661	1
C10orf28	Del_9p23	0.662	1
CTNNB1	Del_15q13.3	0.662	1
DCLK3	7q-Amp	0.662	1
FLT1	5q-Del	0.662	1
KYNU	Amp_1p12	0.662	1
NBPF1	7q-Amp	0.662	1
THSD7B	Amp_6p24.3	0.662	1
XIRP2	Amp_13q31.3	0.662	1
Amp_1p12	Amp_15q26.2	0.662	1
Amp_15q26.2	Del_15q13.3	0.662	1
C15orf23	SELP	0.663	1
C7orf58	11q-Del	0.663	1
CDKN2A	Del_11q23.3	0.663	1
COL3A1	14q-Del	0.663	1
EPHA7	13q-Amp	0.663	1
MYO3B	6q-Del	0.663	1
RELN	Amp_8q24.21	0.663	1
SLC38A4	13q-Amp	0.663	1
THSD7B	20q-Amp	0.663	1
OR4S2	Del_10q21.1	0.664	1
APC	Amp_7p22.1	0.665	1
CAMTA1	Del_15q21.1	0.665	1
CTNNA3	6p-Del	0.665	1
DMC1	NBPF1	0.665	1
FGFR2	GML	0.665	1
GML	20p-Amp	0.665	1
GML	18p-Del	0.665	1
22q-Amp	Del_15q21.1	0.665	1
6p-Del	Amp_3p13	0.665	1
APCS	TP53	0.666	1
APCS	11p-Del	0.666	1
ARID2	OR4S2	0.666	1
C10orf54	Amp_1q21.3	0.666	1
DSG3	GNAQ	0.666	1
DSG3	KRAS	0.666	1
GNAQ	TP53	0.666	1
KRAS	TP53	0.666	1
MYO16	Del_5q31.3	0.666	1
OR4S2	14q-Del	0.666	1
PTPN11	Amp_1q21.3	0.666	1
TP53	Amp_7q34	0.666	1
USP9X	Del_5q12.1	0.666	1
5q-Del	Del_16p13.3	0.666	1
Amp_22q13.2	Del_6q21	0.666	1
ALPK2	10p-Del	0.667	1
BTK	CPA3	0.667	1
BTK	CYP3A4	0.667	1
BTK	DDX3X	0.667	1
BTK	PPP6C	0.667	1
CPA3	ZFX	0.667	1
CPA3	Amp_12q15	0.667	1
CYP3A4	ZFX	0.667	1
CYP3A4	Amp_4q12	0.667	1
CYP3A4	Amp_12q15	0.667	1
DDX3X	Amp_4q12	0.667	1
DDX3X	Amp_12q15	0.667	1
EPHA4	1q-Amp	0.667	1
GNAQ	10q-Del	0.667	1
IDH1	PPP6C	0.667	1
IDH1	Amp_6q12	0.667	1
IGF1R	Amp_7p22.1	0.667	1
NUP214	RAC1	0.667	1
PPP6C	ZFX	0.667	1
RAC1	ZFX	0.667	1
RAC1	Amp_12q15	0.667	1
USH2A	Del_5q31.3	0.667	1
1q-Amp	6p-Del	0.667	1
Amp_7p22.1	Del_16q23.1	0.667	1
C15orf23	8q-Amp	0.668	1
CAMTA1	EZH2	0.668	1
CAMTA1	KIT	0.668	1
CAMTA1	6q-Del	0.668	1
CBL	EPHA7	0.668	1
CCNA1	22q-Amp	0.668	1
EPHA7	RB1	0.668	1
EPHA7	RQCD1	0.668	1
EZH2	PTEN	0.668	1
GLI1	22q-Amp	0.668	1
KIT	22q-Amp	0.668	1
KRT73	PTEN	0.668	1
NAP1L2	NRAS	0.668	1
NAP1L2	RIPK4	0.668	1
RIPK4	22q-Amp	0.668	1
TPTE	Del_15q13.3	0.668	1
ARID2	C10orf54	0.669	1
ARID2	CDK4	0.669	1
ARID2	NUDT11	0.669	1
ARID2	OXA1L	0.669	1
ARID2	PTPN11	0.669	1
BTK	Del_14q23.3	0.669	1
BTK	Del_16q12.1	0.669	1
C10orf54	C7orf58	0.669	1
C7orf58	PTPN11	0.669	1
DCLK3	Amp_22q13.2	0.669	1
EZH2	Del_9p23	0.669	1
FGFR2	Amp_22q13.2	0.669	1
GLI1	Del_9p23	0.669	1
HRAS	Del_10p15.3	0.669	1
IDH1	RPTN	0.669	1
IDH1	Del_14q23.3	0.669	1
KIT	Del_9p23	0.669	1
KRT73	Del_9p23	0.669	1
NBPF1	Amp_20q13.33	0.669	1
NUDT11	Del_5q12.1	0.669	1
OXA1L	14q-Del	0.669	1
PTPN11	14q-Del	0.669	1
RIPK4	Del_9p23	0.669	1
RPTN	ZFX	0.669	1
ZFX	Del_16q12.1	0.669	1
18p-Del	Amp_22q13.2	0.669	1
Amp_20q13.33	Del_2q37.3	0.669	1
COL3A1	Del_4p16.3	0.67	1
EMG1	RPTN	0.67	1
EMG1	Del_14q23.3	0.67	1
SLC9A11	Del_16q23.1	0.67	1
APCS	Del_9p21.3	0.671	1
MYO16	11p-Del	0.671	1
SLC9A11	Del_16q24.3	0.671	1
THSD7B	Del_16q24.3	0.671	1
C15orf23	MAP2K1	0.672	1
CTNNB1	PARM1	0.672	1
GUCY2F	KYNU	0.672	1
GUCY2F	Amp_15q26.2	0.672	1
OR4S2	Amp_8q24.21	0.672	1
PARM1	Amp_15q26.2	0.672	1
GML	Del_5q31.3	0.673	1
RPTN	Amp_8q24.21	0.673	1
Amp_5p15.33	Del_3q13.31	0.673	1
APC	ARID2	0.674	1
ARID2	8p-Amp	0.674	1
C10orf54	Amp_7q34	0.674	1
C7orf58	8p-Amp	0.674	1
CDK4	Amp_7q34	0.674	1
MPP7	Amp_6q12	0.674	1
OXA1L	Amp_7q34	0.674	1
PDGFRA	14q-Del	0.674	1
PDGFRA	Del_5q12.1	0.674	1
PPP6C	Amp_17q25.3	0.674	1
PPP6C	Del_4p16.3	0.674	1
PTPN11	Amp_7q34	0.674	1
PTPN22	Del_5q12.1	0.674	1
PTPN22	Del_10q23.31	0.674	1
S100A8	Amp_7q34	0.674	1
USP9X	Amp_12q14.1	0.674	1
14q-Del	Del_5p15.31	0.674	1
Amp_6q12	Del_4p16.3	0.674	1
ARID2	Del_16q23.1	0.675	1
CYP3A4	DSG3	0.675	1
MLL	Amp_17q25.3	0.675	1
MPP7	20q-Amp	0.675	1
TP53	Amp_6q12	0.675	1
11p-Del	Amp_6q12	0.675	1
Del_8p23.3	Del_16q24.3	0.675	1
C7orf58	Del_6q26	0.677	1
CTNNB1	17p-Del	0.677	1
KYNU	17p-Del	0.677	1
KYNU	Amp_5p15.33	0.677	1
STK19	Amp_13q31.3	0.677	1
7q-Amp	Amp_13q31.3	0.677	1
HRAS	USH2A	0.678	1
TP63	Del_6q21	0.678	1
CDKN2A	Amp_1p12	0.679	1
CDKN2A	Del_15q13.3	0.679	1
COL3A1	20p-Amp	0.679	1
COL3A1	Del_2q37.3	0.679	1
DCLK3	11q-Del	0.679	1
DMC1	Del_12q23.3	0.679	1
EPHA6	Amp_1q21.3	0.679	1
FRMPD4	9q-Del	0.679	1
GML	Del_12q23.3	0.679	1
MYO3B	Amp_1q21.3	0.679	1
RELN	Del_10p15.3	0.679	1
ANO4	Amp_1q44	0.68	1
CTNNB1	1q-Amp	0.68	1
EPHA7	Del_15q13.3	0.68	1
GUCY2F	16q-Del	0.68	1
NBPF1	Del_3q13.31	0.68	1
NBPF1	Del_19p13.3	0.68	1
NUDT11	Del_8p23.3	0.68	1
NUDT11	Del_15q21.1	0.68	1
OR4S2	Del_9p23	0.68	1
OR6C74	16q-Del	0.68	1
OXA1L	Del_8p23.3	0.68	1
PTPN11	Del_8p23.3	0.68	1
PTPN11	Del_15q21.1	0.68	1
TPTE	Amp_7q34	0.68	1
Del_2q37.3	Del_19p13.3	0.68	1
DCLK3	Del_1p36.31	0.681	1
FLT1	20p-Amp	0.681	1
KCND2	Amp_1q44	0.681	1
NF1	USP9X	0.681	1
TP63	Del_1p22.1	0.681	1
USP9X	Del_15q21.1	0.681	1
Amp_17q25.3	Del_16q24.3	0.681	1
APC	22q-Amp	0.682	1
ATP5F1	Del_16q24.3	0.682	1
BRAF	C15orf23	0.682	1
BRAF	DSG3	0.682	1
BRAF	GUCY2F	0.682	1
BTK	7p-Amp	0.682	1
BTK	Del_16q23.1	0.682	1
CAMTA1	8p-Amp	0.682	1
CAMTA1	9q-Del	0.682	1
CYP3A4	7p-Amp	0.682	1
GNAQ	Del_16q24.3	0.682	1
KEL	Del_16p13.3	0.682	1
KRAS	8q-Amp	0.682	1
KRAS	Del_16q24.3	0.682	1
LGR6	7p-Amp	0.682	1
NAP1L2	8p-Amp	0.682	1
NUP214	Del_16q23.1	0.682	1
PTEN	PTPN22	0.682	1
RAC1	7p-Amp	0.682	1
TPTE	Amp_6q12	0.682	1
TPTE	Amp_12q15	0.682	1
USP9X	Del_6q21	0.682	1
7p-Amp	Amp_12q15	0.682	1
Amp_12q15	Del_16q23.1	0.682	1
APCS	Del_19p13.3	0.683	1
CCNA1	TRERF1	0.683	1
CYP3A5	Del_3q13.31	0.683	1
EZH2	PDGFRA	0.683	1
HRAS	THSD7B	0.683	1
IGF1R	Del_19p13.3	0.683	1
KCND2	SLC27A5	0.683	1
KIT	PDGFRA	0.683	1
KRT73	PTPN22	0.683	1
KRT73	8p-Amp	0.683	1
RIPK4	8p-Amp	0.683	1
RIPK4	Del_5p15.31	0.683	1
SYK	Del_3q13.31	0.683	1
1q-Amp	14q-Del	0.683	1
1q-Amp	Del_5q12.1	0.683	1
Amp_4q12	Del_9p21.3	0.683	1
EPHA7	7q-Amp	0.684	1
MYO16	7q-Amp	0.684	1
NAP1L2	Amp_1p12	0.684	1
OR4S2	6q-Del	0.684	1
SLC38A4	7q-Amp	0.684	1
TTN	11q-Del	0.684	1
ARID2	5q-Del	0.685	1
FLT1	Del_1p36.31	0.685	1
NAP1L2	7p-Amp	0.685	1
USP9X	Del_5q31.3	0.685	1
APCS	Del_11q23.3	0.686	1
BTK	6p-Del	0.686	1
CYP3A5	Del_11q23.3	0.686	1
EPHA4	IDH1	0.686	1
EPHA4	Amp_4q12	0.686	1
EPHA4	Amp_12q15	0.686	1
IDH1	Amp_11q13.3	0.686	1
MAN1A1	6p-Del	0.686	1
MLL	11p-Del	0.686	1
NUP214	Amp_11q13.3	0.686	1
PDGFRA	10p-Del	0.686	1
TP53	Amp_5p15.33	0.686	1
TTN	Del_19p13.3	0.686	1
6p-Del	Amp_4q12	0.686	1
DSG3	20p-Amp	0.687	1
DSG3	Del_2q37.3	0.687	1
SLC9A11	10p-Del	0.687	1
11p-Del	Del_2q37.3	0.687	1
9q-Del	Amp_11q13.3	0.687	1
Amp_3p13	Amp_8q24.21	0.687	1
C10orf28	SLC9A11	0.688	1
C10orf28	6p-Amp	0.688	1
C10orf54	Del_6q26	0.688	1
EMG1	SLC9A11	0.688	1
EMG1	6p-Amp	0.688	1
EMG1	Del_10p15.3	0.688	1
MPP7	1q-Amp	0.688	1
THSD7B	16q-Del	0.688	1
BRAF	Del_Xp21.1	0.689	1
BTK	10p-Del	0.689	1
MAN1A1	10p-Del	0.689	1
MYO3B	NRAS	0.689	1
APC	Del_16q24.3	0.69	1
APCS	TP63	0.69	1
CCNA1	Del_10q26.3	0.69	1
CDK4	Del_15q13.3	0.69	1
CDKN2A	Amp_22q13.2	0.69	1
CNTN5	Amp_20q13.33	0.69	1
CNTN5	Amp_22q13.2	0.69	1
CYP3A5	8q-Amp	0.69	1
EZH2	Del_10q26.3	0.69	1
KRT73	Del_10q26.3	0.69	1
NUDT11	Amp_1p12	0.69	1
NUDT11	Del_15q13.3	0.69	1
PTPN11	Del_15q13.3	0.69	1
PTPN22	8q-Amp	0.69	1
RPTN	Amp_6p24.3	0.69	1
TRERF1	8q-Amp	0.69	1
5q-Del	Amp_1q44	0.69	1
BRAF	USP9X	0.691	1
CDKN2A	Del_3q13.31	0.691	1
COL3A1	Del_10p15.3	0.691	1
CPA3	CTNNB1	0.691	1
CPA3	Amp_15q26.2	0.691	1
CTNNB1	LGR6	0.691	1
CTNNB1	RAC1	0.691	1
DDX3X	KYNU	0.691	1
FRMPD4	16q-Del	0.691	1
KYNU	RAC1	0.691	1
KYNU	Amp_6q12	0.691	1
LGR6	MAP2K1	0.691	1
MAP2K1	RAC1	0.691	1
OR6C74	5q-Del	0.691	1
PPP6C	Amp_15q26.2	0.691	1
RB1	5q-Del	0.691	1
ANO4	Del_16q12.1	0.692	1
COL3A1	Amp_13q31.3	0.692	1
GML	NRAS	0.692	1
LGR6	MYO16	0.692	1
PPP6C	SELP	0.692	1
PPP6C	SLC38A4	0.692	1
TP53	Amp_7p22.1	0.692	1
APC	Del_11q23.3	0.693	1
COL3A1	DMC1	0.693	1
NF1	PTPN22	0.693	1
NF1	Del_5p15.31	0.693	1
PDGFRA	Del_8p23.3	0.693	1
PDGFRA	Del_15q21.1	0.693	1
PTPN22	Del_15q21.1	0.693	1
8p-Amp	Del_8p23.3	0.693	1
CNTN5	Del_8p23.3	0.694	1
EPHA4	Amp_22q13.2	0.694	1
EPHA7	Amp_3p13	0.694	1
NGF	Del_10q26.3	0.694	1
SELP	Amp_7q34	0.694	1
SLC38A4	Amp_7q34	0.694	1
ARID2	Amp_7q34	0.695	1
C15orf23	OR4S2	0.695	1
DSG3	Del_11q23.3	0.695	1
GUCY2F	USP9X	0.695	1
MPP7	SLC27A5	0.695	1
MSTN	Amp_17q25.3	0.695	1
MSTN	Del_1p22.1	0.695	1
MSTN	Del_4p16.3	0.695	1
MYO3B	Amp_7q34	0.695	1
NRAS	USP17L2	0.695	1
PARM1	USP9X	0.695	1
POTEG	1q-Amp	0.695	1
RELN	Amp_11q13.3	0.695	1
SLC27A5	Amp_17q25.3	0.695	1
SLC9A11	Amp_4q12	0.695	1
SLC9A11	Amp_12q15	0.695	1
TRERF1	Amp_8q24.21	0.695	1
ZNF780B	Amp_17q25.3	0.695	1
CDKN2A	Del_4p16.3	0.696	1
GUCY2F	5q-Del	0.696	1
OR4S2	Amp_1p12	0.696	1
PARM1	5q-Del	0.696	1
USP9X	Amp_1p12	0.696	1
USP9X	Del_15q13.3	0.696	1
Amp_12q14.1	Del_16p13.3	0.696	1
PTEN	Amp_7q34	0.697	1
SLC9A11	10q-Del	0.697	1
USH2A	Del_11q23.3	0.697	1
7q-Amp	Del_12q23.3	0.697	1
APCS	PTEN	0.698	1
ARID2	Del_16p13.3	0.698	1
CCNA1	FGFR2	0.698	1
CCNA1	18p-Del	0.698	1
CDC42BPA	20p-Amp	0.698	1
CYP3A5	22q-Amp	0.698	1
DCLK3	KIT	0.698	1
FGFR2	RIPK4	0.698	1
GLI1	18p-Del	0.698	1
GLI1	Del_2q37.3	0.698	1
IGF1R	NAP1L2	0.698	1
KIT	20p-Amp	0.698	1
KIT	18p-Del	0.698	1
KRT73	20p-Amp	0.698	1
RIPK4	Del_2q37.3	0.698	1
SYK	22q-Amp	0.698	1
SYK	6q-Del	0.698	1
USP9X	7q-Amp	0.698	1
Amp_12q14.1	Del_5q12.1	0.698	1
ALPK2	Del_12q23.3	0.699	1
ALPK2	Del_13q34	0.699	1
DSG3	Del_10q21.1	0.699	1
GUCY2F	Del_6q26	0.699	1
TP53	16q-Del	0.699	1
ARID2	Del_2q37.3	0.7	1
C10orf54	20q-Amp	0.7	1
C10orf54	Amp_5p15.33	0.7	1
C7orf58	20p-Amp	0.7	1
C7orf58	18p-Del	0.7	1
CBL	Amp_7p22.1	0.7	1
CDC42BPA	Amp_1q44	0.7	1
CDK4	MLL	0.7	1
CDK4	20q-Amp	0.7	1
CTNNB1	Amp_1q44	0.7	1
DCLK3	Del_5q12.1	0.7	1
DSG3	Amp_22q13.2	0.7	1
FGFR2	Del_5q12.1	0.7	1
MLL	PTPN11	0.7	1
MLL	S100A8	0.7	1
NUDT11	20q-Amp	0.7	1
OR6C74	Amp_7p22.1	0.7	1
OXA1L	20q-Amp	0.7	1
PTPN11	17p-Del	0.7	1
PTPN11	Amp_5p15.33	0.7	1
RIPK4	Amp_1q44	0.7	1
RQCD1	Amp_7p22.1	0.7	1
S100A8	20q-Amp	0.7	1
S100A8	17p-Del	0.7	1
TTN	16q-Del	0.7	1
20p-Amp	14q-Del	0.7	1
20p-Amp	Del_5q12.1	0.7	1
14q-Del	Del_2q37.3	0.7	1
Del_2q37.3	Del_5q12.1	0.7	1
BRAF	NUP214	0.701	1
EPHA4	Amp_17q25.3	0.701	1
EPHA7	Amp_5p15.33	0.701	1
SELP	20q-Amp	0.701	1
TTN	Del_Xp21.1	0.701	1
Del_3q13.31	Del_12q23.3	0.701	1
C10orf28	Del_10q21.1	0.702	1
CBL	FLT1	0.702	1
CBL	Del_4q34.3	0.702	1
EMG1	Del_10q21.1	0.702	1
FLT1	RQCD1	0.702	1
KEL	OR6C74	0.702	1
KEL	RQCD1	0.702	1
MLL	PTEN	0.702	1
MLL	22q-Amp	0.702	1
NGF	Del_1p36.31	0.702	1
RB1	Del_4q34.3	0.702	1
10p-Del	Amp_3p13	0.702	1
C15orf23	10p-Del	0.703	1
CAMTA1	18p-Del	0.703	1
CAMTA1	Del_2q37.3	0.703	1
CTNNA3	6q-Del	0.703	1
DCLK3	PTEN	0.703	1
DCLK3	22q-Amp	0.703	1
EPHA6	1q-Amp	0.703	1
FGFR2	PTEN	0.703	1
IDH1	USP17L2	0.703	1
NBPF1	PTEN	0.703	1
PARM1	10p-Del	0.703	1
POTEG	PTEN	0.703	1
POTEG	22q-Amp	0.703	1
USP17L2	Amp_4q12	0.703	1
USP17L2	Amp_12q15	0.703	1
ZFX	Amp_13q31.3	0.703	1
22q-Amp	18p-Del	0.703	1
22q-Amp	Del_2q37.3	0.703	1
ACSBG1	10q-Del	0.704	1
APC	Del_5p15.31	0.704	1
BRAF	6q-Del	0.704	1
CPA3	Amp_1q44	0.704	1
CYP3A5	10q-Del	0.704	1
GUCY2F	Del_9p21.3	0.704	1
LGR6	Amp_1q44	0.704	1
MAP2K1	RELN	0.704	1
PDGFRA	8p-Amp	0.704	1
RPTN	Del_11q23.3	0.704	1
USH2A	Amp_1q44	0.704	1
C10orf54	Amp_1q44	0.705	1
CPA3	8q-Amp	0.705	1
CTNNB1	Del_14q23.3	0.705	1
KYNU	Del_16q12.1	0.705	1
MAP2K1	Del_16q12.1	0.705	1
PTPN11	Amp_1q44	0.705	1
ALPK2	5q-Del	0.706	1
ANO4	EMG1	0.706	1
CCNA1	Del_10q23.31	0.707	1
CDC42BPA	Del_10q23.31	0.707	1
EPHA6	22q-Amp	0.707	1
EZH2	Del_10q23.31	0.707	1
HSD11B1	11p-Del	0.707	1
KIT	Del_10q23.31	0.707	1
KRT73	Del_10q23.31	0.707	1
MYO16	SLC27A5	0.707	1
SLC27A5	SLC38A4	0.707	1
STK19	11p-Del	0.707	1
USP9X	Amp_7q34	0.707	1
XIRP2	8p-Amp	0.707	1
5q-Del	Del_8p23.3	0.707	1
ACSBG1	9q-Del	0.708	1
APCS	Amp_1q21.3	0.708	1
ARID2	Del_1p36.31	0.708	1
ARID2	Del_4q34.3	0.708	1
C7orf58	Del_1p36.31	0.708	1
FLT1	Del_5q12.1	0.708	1
GML	Del_6q26	0.708	1
IGF1R	Amp_1q21.3	0.708	1
KEL	Del_5q12.1	0.708	1
SLC27A5	Del_11q23.3	0.708	1
BTK	Del_10q23.31	0.709	1
CDC42BPA	Amp_6p24.3	0.709	1
CDK4	CDKN2A	0.709	1
CDKN2A	NUDT11	0.709	1
GML	Del_10p15.3	0.709	1
KCND2	Del_16q23.1	0.709	1
KIT	Amp_6p24.3	0.709	1
NGF	Del_10q23.31	0.709	1
NRAS	ZFX	0.709	1
NRAS	Amp_12q15	0.709	1
TRERF1	6q-Del	0.709	1
ANO4	Amp_1q21.3	0.71	1
CTNNB1	Amp_11q13.3	0.71	1
HSD11B1	Del_19p13.3	0.71	1
MYO16	8q-Amp	0.71	1
OR4S2	20q-Amp	0.71	1
OR4S2	11q-Del	0.71	1
OR4S2	Amp_5p15.33	0.71	1
SELP	8q-Amp	0.71	1
STK19	Del_19p13.3	0.71	1
USP9X	11q-Del	0.71	1
8q-Amp	9q-Del	0.71	1
Amp_11q13.3	Amp_15q26.2	0.71	1
EPHA6	GUCY2F	0.711	1
PTPN22	Del_15q13.3	0.711	1
ZNF780B	Del_9p23	0.711	1
Amp_1q21.3	Del_16q12.1	0.711	1
Amp_7q34	Del_Xp21.1	0.711	1
C15orf23	Del_4q34.3	0.712	1
CCNA1	Del_13q34	0.712	1
CDC42BPA	Del_12q23.3	0.712	1
CDC42BPA	Del_13q34	0.712	1
EZH2	Del_12q23.3	0.712	1
EZH2	Del_13q34	0.712	1
GLI1	Del_13q34	0.712	1
GUCY2F	Del_1p36.31	0.712	1
KEL	13q-Amp	0.712	1
KRT73	Del_12q23.3	0.712	1
KRT73	Del_13q34	0.712	1
RELN	Amp_1q21.3	0.712	1
RIPK4	Del_13q34	0.712	1
Amp_1q21.3	Del_8p23.3	0.712	1
APCS	PTPN22	0.713	1
BRAF	MPP7	0.713	1
C10orf54	Amp_6p24.3	0.713	1
C7orf58	CBL	0.713	1
C7orf58	RB1	0.713	1
C7orf58	RQCD1	0.713	1
CBL	14q-Del	0.713	1
CBL	Del_5q12.1	0.713	1
COL3A1	Del_13q34	0.713	1
CYP3A5	TRERF1	0.713	1
CYP3A5	8p-Amp	0.713	1
CYP3A5	Del_5p15.31	0.713	1
IGF1R	8p-Amp	0.713	1
MLL	Del_5q31.3	0.713	1
NGF	14q-Del	0.713	1
OR6C74	14q-Del	0.713	1
OR6C74	Del_5q12.1	0.713	1
RB1	14q-Del	0.713	1
RB1	Del_5q12.1	0.713	1
S100A8	Amp_6p24.3	0.713	1
SYK	Del_5p15.31	0.713	1
USH2A	5q-Del	0.713	1
ZFX	Del_9p23	0.713	1
20q-Amp	Del_5q31.3	0.713	1
Amp_4q12	Del_9p23	0.713	1
Del_8p23.3	Del_16p13.3	0.713	1
APCS	BRAF	0.714	1
COL3A1	10p-Del	0.714	1
CPA3	OR4S2	0.714	1
DDX3X	OR4S2	0.714	1
EMG1	Amp_20q13.33	0.714	1
LGR6	Del_11q23.3	0.714	1
NRAS	PTPN22	0.714	1
OR4S2	RAC1	0.714	1
PPP6C	Del_11q23.3	0.714	1
RAC1	USP9X	0.714	1
TRERF1	Del_6q21	0.714	1
Amp_20q13.33	Del_14q23.3	0.714	1
Amp_22q13.2	Del_9p21.3	0.714	1
TTN	6p-Amp	0.715	1
CBL	9p-Del	0.716	1
CBL	Amp_8q24.21	0.716	1
CNTN5	Amp_4q12	0.716	1
DDX3X	Amp_6p24.3	0.716	1
EPHA6	Amp_7p22.1	0.716	1
EZH2	9p-Del	0.716	1
GLI1	9p-Del	0.716	1
GUCY2F	Amp_12q14.1	0.716	1
GUCY2F	Del_16p13.3	0.716	1
NGF	Amp_8q24.21	0.716	1
OR6C74	9p-Del	0.716	1
PARM1	Amp_12q14.1	0.716	1
PARM1	Del_16p13.3	0.716	1
PPP6C	Amp_6p24.3	0.716	1
RAC1	Amp_6p24.3	0.716	1
RIPK4	9p-Del	0.716	1
RQCD1	9p-Del	0.716	1
SLC9A11	11q-Del	0.716	1
THSD7B	Del_12q23.3	0.717	1
Amp_17q25.3	Del_1p22.1	0.717	1
APCS	Amp_7q34	0.718	1
GNAQ	Del_10q23.31	0.718	1
MAP2K1	Del_16q23.1	0.718	1
TTN	14q-Del	0.718	1
TTN	Del_5q12.1	0.718	1
USP17L2	6q-Del	0.718	1
Amp_1q21.3	Amp_3p13	0.718	1
BTK	9p-Del	0.719	1
DCLK3	Del_15q21.1	0.719	1
EPHA7	Amp_11q13.3	0.719	1
KEL	Del_9p21.3	0.719	1
KRTAP5-10	16q-Del	0.719	1
MAN1A1	9p-Del	0.719	1
MSTN	16q-Del	0.719	1
MYO16	6p-Del	0.719	1
MYO3B	Del_10p15.3	0.719	1
OXA1L	Del_14q23.3	0.719	1
OXA1L	Del_16q12.1	0.719	1
PTPN11	Del_14q23.3	0.719	1
SLC38A4	6p-Del	0.719	1
SLC9A11	Del_10q23.31	0.719	1
USH2A	Amp_12q14.1	0.719	1
ZNF780B	16q-Del	0.719	1
FRMPD4	Del_19p13.3	0.72	1
MPP7	Amp_1q44	0.72	1
MYO3B	Del_19p13.3	0.72	1
PTPN22	10q-Del	0.72	1
TRERF1	10q-Del	0.72	1
Amp_1q44	Del_1p22.1	0.72	1
ANO4	8q-Amp	0.721	1
ANO4	Amp_4q12	0.721	1
ANO4	Del_16q24.3	0.721	1
CCNA1	Del_5q31.3	0.721	1
EZH2	Del_5q31.3	0.721	1
FGFR2	8q-Amp	0.721	1
FGFR2	Del_16q24.3	0.721	1
KRT73	Del_5q31.3	0.721	1
NF1	9p-Del	0.721	1
POTEG	Del_16q24.3	0.721	1
TP63	18p-Del	0.721	1
TPTE	Del_5p15.31	0.721	1
DMC1	RELN	0.722	1
DSG3	EMG1	0.722	1
EMG1	TP53	0.722	1
GML	RELN	0.722	1
PTEN	USH2A	0.722	1
RELN	Del_1p22.1	0.722	1
APC	Amp_1q21.3	0.723	1
CAMTA1	Del_12q23.3	0.723	1
CAMTA1	Del_13q34	0.723	1
DSG3	11p-Del	0.723	1
NAP1L2	Del_12q23.3	0.723	1
NF1	RQCD1	0.723	1
PDGFRA	9q-Del	0.723	1
RB1	Del_8p23.3	0.723	1
RQCD1	Del_8p23.3	0.723	1
THSD7B	7q-Amp	0.723	1
USH2A	Del_16q12.1	0.723	1
1q-Amp	Del_9p21.3	0.723	1
22q-Amp	Del_13q34	0.723	1
9p-Del	Amp_12q14.1	0.723	1
BRAF	Del_13q34	0.724	1
KRTAP5-10	10q-Del	0.724	1
LGR6	5q-Del	0.724	1
PPP6C	5q-Del	0.724	1
APC	POTEG	0.725	1
APC	20p-Amp	0.725	1
APC	18p-Del	0.725	1
ARID2	Del_13q34	0.725	1
EZH2	MYO3B	0.725	1
FGFR2	Del_5p15.31	0.725	1
FRMPD4	GLI1	0.725	1
HSD11B1	PTEN	0.725	1
MLL	Del_14q23.3	0.725	1
NF1	Del_6q26	0.725	1
PDGFRA	18p-Del	0.725	1
PTPN22	Del_2q37.3	0.725	1
TRERF1	18p-Del	0.725	1
TRERF1	Del_2q37.3	0.725	1
XIRP2	Del_11q23.3	0.725	1
20p-Amp	Del_5p15.31	0.725	1
Amp_12q14.1	Del_5q31.3	0.725	1
ALPK2	Amp_13q31.3	0.726	1
COL3A1	1q-Amp	0.726	1
XIRP2	Del_15q13.3	0.726	1
ACSBG1	Del_2q37.3	0.727	1
ANO4	Del_5q31.3	0.727	1
APCS	20p-Amp	0.727	1
APCS	Del_2q37.3	0.727	1
ARID2	13q-Amp	0.727	1
C15orf23	14q-Del	0.727	1
CYP3A5	FGFR2	0.727	1
CYP3A5	20p-Amp	0.727	1
CYP3A5	18p-Del	0.727	1
CYP3A5	Del_2q37.3	0.727	1
GUCY2F	Del_5q12.1	0.727	1
IGF1R	POTEG	0.727	1
IGF1R	20p-Amp	0.727	1
MPP7	Amp_13q31.3	0.727	1
NAP1L2	Del_9p23	0.727	1
PARM1	14q-Del	0.727	1
SYK	18p-Del	0.727	1
SYK	Del_2q37.3	0.727	1
USP17L2	Amp_15q26.2	0.727	1
USP17L2	Del_1p22.1	0.727	1
Amp_13q31.3	Amp_17q25.3	0.727	1
Amp_13q31.3	Del_4p16.3	0.727	1
APC	Amp_5p15.33	0.728	1
BRAF	9p-Del	0.728	1
CDK4	Del_16q23.1	0.728	1
FRMPD4	Amp_22q13.2	0.728	1
MLL	8q-Amp	0.728	1
MLL	Del_5p15.31	0.728	1
PDGFRA	Amp_5p15.33	0.728	1
PTPN11	Del_16q23.1	0.728	1
S100A8	Del_16q23.1	0.728	1
TP63	Amp_5p15.33	0.728	1
DSG3	Del_10q26.3	0.729	1
MAN1A1	Del_10p15.3	0.729	1
OR4S2	Del_11q23.3	0.729	1
POTEG	10p-Del	0.729	1
USH2A	Amp_17q25.3	0.729	1
DMC1	Del_1p22.1	0.73	1
GML	Del_4p16.3	0.73	1
HSD11B1	Del_16q24.3	0.73	1
SLC27A5	5q-Del	0.73	1
XIRP2	Amp_1q21.3	0.73	1
BRAF	TRERF1	0.731	1
CDC42BPA	7q-Amp	0.731	1
KRT73	7q-Amp	0.731	1
KYNU	6p-Amp	0.731	1
MAP2K1	6p-Amp	0.731	1
NGF	Del_6q21	0.731	1
OR6C74	Del_6q21	0.731	1
RELN	Amp_7p22.1	0.731	1
SLC9A11	Amp_15q26.2	0.731	1
Amp_3p13	Del_11q23.3	0.731	1
ALPK2	Del_1p36.31	0.732	1
ALPK2	Del_4q34.3	0.732	1
KEL	Amp_20q13.33	0.732	1
OR4S2	Amp_11q13.3	0.732	1
OR6C74	9q-Del	0.732	1
OR6C74	Amp_1q21.3	0.732	1
RQCD1	9q-Del	0.732	1
USP9X	Amp_11q13.3	0.732	1
ALPK2	Amp_12q15	0.733	1
BRAF	XIRP2	0.733	1
BTK	Amp_22q13.2	0.733	1
CAMTA1	Del_9p21.3	0.733	1
KRT73	Del_6q21	0.733	1
MAN1A1	Amp_20q13.33	0.733	1
NGF	Amp_1p12	0.733	1
NUP214	Amp_20q13.33	0.733	1
NUP214	Amp_22q13.2	0.733	1
OR6C74	Amp_1p12	0.733	1
RB1	Amp_1p12	0.733	1
RELN	Amp_13q31.3	0.733	1
ZFX	Amp_22q13.2	0.733	1
22q-Amp	Del_9p21.3	0.733	1
FGFR2	Amp_8q24.21	0.734	1
GNAQ	Del_5q31.3	0.734	1
TTN	17p-Del	0.734	1
USH2A	11q-Del	0.734	1
BTK	Del_3q13.31	0.735	1
BTK	Del_19p13.3	0.735	1
CAMTA1	Del_14q23.3	0.735	1
CPA3	Del_16p13.3	0.735	1
CYP3A4	Del_16p13.3	0.735	1
DDX3X	Amp_12q14.1	0.735	1
DDX3X	Del_16p13.3	0.735	1
DSG3	Del_14q23.3	0.735	1
IDH1	Del_19p13.3	0.735	1
LGR6	Del_16p13.3	0.735	1
MAN1A1	Del_3q13.31	0.735	1
MAN1A1	Del_19p13.3	0.735	1
NUP214	Del_3q13.31	0.735	1
PTEN	RPTN	0.735	1
RAC1	Amp_12q14.1	0.735	1
RAC1	Del_16p13.3	0.735	1
RPTN	11p-Del	0.735	1
TP53	Del_16q12.1	0.735	1
ZFX	Del_3q13.31	0.735	1
16q-Del	Amp_11q13.3	0.735	1
Amp_12q15	Del_3q13.31	0.735	1
ATP5F1	Del_6q21	0.736	1
BRAF	THSD7B	0.736	1
GLI1	10p-Del	0.736	1
KIT	10p-Del	0.736	1
KRT73	10p-Del	0.736	1
SLC9A11	1q-Amp	0.736	1
Amp_3p13	Del_9p23	0.736	1
C10orf54	6p-Amp	0.737	1
CCNA1	Amp_3p13	0.737	1
CDC42BPA	Amp_3p13	0.737	1
CDK4	6p-Amp	0.737	1
COL3A1	Amp_1q44	0.737	1
EZH2	Amp_3p13	0.737	1
FGFR2	Amp_1p12	0.737	1
KCND2	16q-Del	0.737	1
OR4S2	Del_14q23.3	0.737	1
PTPN11	6p-Amp	0.737	1
PTPN22	Amp_7q34	0.737	1
TRERF1	Amp_7q34	0.737	1
USH2A	Del_15q13.3	0.737	1
BTK	Del_6q21	0.738	1
C10orf28	Del_16q24.3	0.738	1
EMG1	TP63	0.738	1
EMG1	8q-Amp	0.738	1
EPHA4	Del_16q24.3	0.738	1
EPHA7	Amp_17q25.3	0.738	1
SLC38A4	Del_4p16.3	0.738	1
CDKN2A	Amp_7p22.1	0.739	1
CTNNA3	Del_3q13.31	0.739	1
CTNNA3	Del_19p13.3	0.739	1
SLC38A4	Del_10p15.3	0.739	1
CPA3	Del_1p36.31	0.74	1
CPA3	Del_4q34.3	0.74	1
CYP3A4	Del_1p36.31	0.74	1
CYP3A4	Del_4q34.3	0.74	1
DDX3X	KEL	0.74	1
DMC1	TPTE	0.74	1
DMC1	7p-Amp	0.74	1
FLT1	SLC27A5	0.74	1
FLT1	Amp_6q12	0.74	1
HSD11B1	8p-Amp	0.74	1
HSD11B1	Del_5p15.31	0.74	1
KRTAP5-10	Del_1p36.31	0.74	1
MSTN	Del_4q34.3	0.74	1
PARM1	Amp_7p22.1	0.74	1
PDGFRA	Del_10p15.3	0.74	1
PTPN22	Del_10p15.3	0.74	1
RAC1	Del_4q34.3	0.74	1
RB1	Amp_7q34	0.74	1
SLC9A11	Del_3q13.31	0.74	1
SLC9A11	Del_19p13.3	0.74	1
STK19	TRERF1	0.74	1
STK19	8p-Amp	0.74	1
THSD7B	Del_16q12.1	0.74	1
ZNF780B	Del_1p36.31	0.74	1
Amp_6q12	Del_4q34.3	0.74	1
ALPK2	9q-Del	0.741	1
APCS	Del_12q23.3	0.741	1
APCS	Del_13q34	0.741	1
CCK	7q-Amp	0.741	1
CYP3A5	Del_12q23.3	0.741	1
EZH2	11q-Del	0.741	1
IGF1R	Del_13q34	0.741	1
MLL	Del_10p15.3	0.741	1
MLL	Del_16p13.3	0.741	1
TP53	Amp_13q31.3	0.741	1
USP17L2	11p-Del	0.741	1
17p-Del	Del_16p13.3	0.741	1
Amp_5p15.33	Del_10p15.3	0.741	1
CBL	MLL	0.742	1
CBL	17p-Del	0.742	1
CTNNB1	10p-Del	0.742	1
DMC1	SELP	0.742	1
FRMPD4	22q-Amp	0.742	1
GML	SELP	0.742	1
GUCY2F	Del_8p23.3	0.742	1
GUCY2F	Del_15q21.1	0.742	1
KYNU	10p-Del	0.742	1
MLL	NGF	0.742	1
OR6C74	17p-Del	0.742	1
OR6C74	Amp_5p15.33	0.742	1
RB1	20q-Amp	0.742	1
RB1	17p-Del	0.742	1
RB1	Amp_5p15.33	0.742	1
RQCD1	20q-Amp	0.742	1
RQCD1	17p-Del	0.742	1
RQCD1	Amp_5p15.33	0.742	1
TTN	Del_10p15.3	0.742	1
EPHA7	Amp_13q31.3	0.743	1
NF1	Del_12q23.3	0.743	1
NF1	Del_13q34	0.743	1
RPTN	10p-Del	0.743	1
SLC38A4	Amp_13q31.3	0.743	1
THSD7B	Amp_17q25.3	0.743	1
USP9X	Del_6q26	0.743	1
Amp_7q34	Amp_13q31.3	0.743	1
ALPK2	Del_10p15.3	0.744	1
APC	Del_13q34	0.744	1
CDKN2A	16q-Del	0.744	1
PTPN22	Del_12q23.3	0.744	1
PTPN22	Del_13q34	0.744	1
SLC9A11	Amp_1p12	0.744	1
TP53	Amp_12q15	0.744	1
TRERF1	Del_13q34	0.744	1
USP17L2	Del_10q21.1	0.744	1
9p-Del	Amp_22q13.2	0.744	1
CDKN2A	TRERF1	0.745	1
DCLK3	18p-Del	0.745	1
FGFR2	18p-Del	0.745	1
POTEG	20p-Amp	0.745	1
POTEG	18p-Del	0.745	1
20p-Amp	Del_2q37.3	0.745	1
9p-Del	Amp_3p13	0.745	1
BRAF	Del_16q23.1	0.746	1
MYO3B	Del_10q21.1	0.746	1
BRAF	USP17L2	0.747	1
DCLK3	6q-Del	0.747	1
TTN	Del_16q24.3	0.747	1
USP17L2	Del_10q26.3	0.747	1
7q-Amp	Del_3q13.31	0.747	1
BTK	Del_10q21.1	0.748	1
FAM58A	11q-Del	0.748	1
KRAS	11q-Del	0.748	1
USH2A	Amp_4q12	0.748	1
Amp_12q15	Del_10q21.1	0.748	1
MYO3B	Del_5q12.1	0.749	1
NRAS	NUDT11	0.749	1
NRAS	S100A8	0.749	1
TP63	Del_13q34	0.749	1
USP9X	10q-Del	0.749	1
6p-Del	Amp_1q44	0.749	1
ACSBG1	Del_9p23	0.75	1
BRAF	NGF	0.75	1
BTK	CAMTA1	0.75	1
CAMTA1	Amp_12q15	0.75	1
FLT1	Amp_1p12	0.75	1
FLT1	Del_15q13.3	0.75	1
IGF1R	Del_9p23	0.75	1
KEL	Amp_1p12	0.75	1
KRTAP5-10	Del_5q12.1	0.75	1
LGR6	10p-Del	0.75	1
MAN1A1	PTEN	0.75	1
NAP1L2	Amp_4q12	0.75	1
NUP214	PTEN	0.75	1
SLC27A5	14q-Del	0.75	1
SLC27A5	Del_5q12.1	0.75	1
STK19	6q-Del	0.75	1
USP9X	Amp_1q44	0.75	1
ZFX	22q-Amp	0.75	1
ZNF780B	Del_5q12.1	0.75	1
22q-Amp	Amp_12q15	0.75	1
10p-Del	Amp_6q12	0.75	1
Amp_1p12	Del_1p36.31	0.75	1
Amp_1p12	Del_4q34.3	0.75	1
Amp_8q24.21	Del_1p36.31	0.75	1
ARID2	Del_8p23.3	0.751	1
ARID2	Del_15q21.1	0.751	1
C7orf58	Del_8p23.3	0.751	1
CAMTA1	Del_16q23.1	0.751	1
Amp_7p22.1	Del_16q24.3	0.751	1
ALPK2	Del_5q31.3	0.752	1
CDKN2A	NGF	0.752	1
CDKN2A	OR6C74	0.752	1
CDKN2A	Del_16q24.3	0.752	1
CNTN5	Amp_1q44	0.752	1
EPHA4	Amp_12q14.1	0.752	1
SLC9A11	Amp_17q25.3	0.752	1
TTN	Amp_15q26.2	0.752	1
6p-Amp	Del_4p16.3	0.752	1
Amp_11q13.3	Del_16p13.3	0.752	1
ANO4	NUDT11	0.753	1
CCNA1	NRAS	0.753	1
FLT1	Del_6q26	0.753	1
FRMPD4	Amp_1q44	0.753	1
GML	16q-Del	0.753	1
KEL	Del_6q26	0.753	1
NBPF1	Amp_5p15.33	0.753	1
NRAS	RIPK4	0.753	1
POTEG	20q-Amp	0.753	1
POTEG	Amp_5p15.33	0.753	1
17p-Del	Del_2q37.3	0.753	1
APCS	FRMPD4	0.754	1
ARID2	Del_10q26.3	0.754	1
C15orf23	DDX3X	0.754	1
C15orf23	LGR6	0.754	1
C15orf23	PPP6C	0.754	1
C15orf23	Amp_6q12	0.754	1
C7orf58	Amp_6q12	0.754	1
CPA3	13q-Amp	0.754	1
CTNNA3	Amp_22q13.2	0.754	1
CYP3A4	13q-Amp	0.754	1
CYP3A4	14q-Del	0.754	1
CYP3A5	MYO3B	0.754	1
DDX3X	PARM1	0.754	1
DDX3X	Del_5q12.1	0.754	1
HSD11B1	NBPF1	0.754	1
HSD11B1	18p-Del	0.754	1
HSD11B1	Del_2q37.3	0.754	1
KCND2	9q-Del	0.754	1
KCND2	Amp_1q21.3	0.754	1
PARM1	Amp_6q12	0.754	1
PPP6C	Del_5q12.1	0.754	1
STK19	Del_2q37.3	0.754	1
ANO4	CTNNB1	0.755	1
APCS	Amp_1q44	0.755	1
ATP5F1	1q-Amp	0.755	1
CNTN5	20q-Amp	0.755	1
IGF1R	Amp_1q44	0.755	1
TPTE	18p-Del	0.755	1
ARID2	Amp_22q13.2	0.756	1
BRAF	PPP6C	0.756	1
BRAF	RAC1	0.756	1
C15orf23	Amp_1p12	0.756	1
GUCY2F	Del_15q13.3	0.756	1
NBPF1	NRAS	0.756	1
PARM1	Amp_1p12	0.756	1
14q-Del	Amp_20q13.33	0.756	1
Amp_22q13.2	Del_5q12.1	0.756	1
CYP3A5	Del_10q26.3	0.757	1
KCND2	Del_9p21.3	0.757	1
MSTN	Amp_7p22.1	0.757	1
16q-Del	Amp_17q25.3	0.757	1
EPHA6	9p-Del	0.758	1
MPP7	Amp_8q24.21	0.758	1
RELN	Del_13q34	0.758	1
TP53	Del_16q23.1	0.758	1
Amp_8q24.21	Del_1p22.1	0.758	1
ALPK2	Amp_7q34	0.759	1
C10orf54	Del_9p21.3	0.759	1
CDK4	Del_9p21.3	0.759	1
CTNNB1	Del_19p13.3	0.759	1
HSD11B1	9q-Del	0.759	1
KYNU	Del_19p13.3	0.759	1
OXA1L	Del_9p21.3	0.759	1
SLC9A11	Del_10p15.3	0.759	1
USP17L2	16q-Del	0.759	1
CTNNA3	22q-Amp	0.76	1
KRTAP5-10	NF1	0.76	1
KRTAP5-10	Del_15q21.1	0.76	1
NAP1L2	Amp_3p13	0.76	1
NF1	SLC27A5	0.76	1
PTEN	Amp_3p13	0.76	1
SLC27A5	Del_15q21.1	0.76	1
SLC9A11	Amp_20q13.33	0.76	1
ZNF780B	Del_15q21.1	0.76	1
6q-Del	Amp_5p15.33	0.76	1
Del_13q34	Del_15q13.3	0.76	1
APC	Del_16q12.1	0.761	1
C10orf28	EPHA6	0.761	1
C15orf23	Del_5q31.3	0.761	1
C7orf58	Amp_1q44	0.761	1
CBL	Del_14q23.3	0.761	1
CBL	Del_16q12.1	0.761	1
CCK	Del_9p21.3	0.761	1
CDC42BPA	Amp_17q25.3	0.761	1
EZH2	Del_1p22.1	0.761	1
EZH2	Del_4p16.3	0.761	1
GLI1	Amp_17q25.3	0.761	1
GUCY2F	Del_5q31.3	0.761	1
KIT	Amp_17q25.3	0.761	1
KRT73	Amp_17q25.3	0.761	1
KRT73	Del_4p16.3	0.761	1
NGF	Del_14q23.3	0.761	1
NGF	Del_16q12.1	0.761	1
NRAS	Amp_15q26.2	0.761	1
OR6C74	Del_14q23.3	0.761	1
RB1	RPTN	0.761	1
RPTN	8p-Amp	0.761	1
8p-Amp	Del_16q12.1	0.761	1
Amp_1q44	Del_5q12.1	0.761	1
ALPK2	NUDT11	0.762	1
C10orf54	Amp_20q13.33	0.762	1
C10orf54	Amp_22q13.2	0.762	1
CAMTA1	Amp_6p24.3	0.762	1
CDK4	Amp_20q13.33	0.762	1
CDK4	Amp_22q13.2	0.762	1
CDK4	Del_9p23	0.762	1
CDK4	Del_10p15.3	0.762	1
NRAS	Del_Xp21.1	0.762	1
NUDT11	Del_9p23	0.762	1
OXA1L	Amp_20q13.33	0.762	1
OXA1L	Del_9p23	0.762	1
PARM1	Amp_8q24.21	0.762	1
S100A8	Amp_20q13.33	0.762	1
S100A8	Amp_22q13.2	0.762	1
TP63	5q-Del	0.762	1
XIRP2	Del_3q13.31	0.762	1
8q-Amp	5q-Del	0.762	1
CCNA1	Del_9p21.3	0.763	1
CYP3A5	Amp_6p24.3	0.763	1
DCLK3	Del_6q21	0.763	1
EZH2	Del_9p21.3	0.763	1
GML	5q-Del	0.763	1
KRT73	Del_9p21.3	0.763	1
RIPK4	Del_9p21.3	0.763	1
ACSBG1	Del_5q31.3	0.764	1
APC	BTK	0.764	1
APCS	Del_5q31.3	0.764	1
BTK	8p-Amp	0.764	1
EPHA4	Del_11q23.3	0.764	1
FGFR2	Del_12q23.3	0.764	1
IDH1	PDGFRA	0.764	1
IDH1	TRERF1	0.764	1
IDH1	8p-Amp	0.764	1
IDH1	Del_5p15.31	0.764	1
NBPF1	Del_12q23.3	0.764	1
NBPF1	Del_13q34	0.764	1
PDGFRA	Amp_4q12	0.764	1
POTEG	Del_12q23.3	0.764	1
PTPN22	Amp_4q12	0.764	1
PTPN22	Amp_12q15	0.764	1
THSD7B	9p-Del	0.764	1
TRERF1	Amp_4q12	0.764	1
8p-Amp	Amp_12q15	0.764	1
EPHA4	Del_1p36.31	0.765	1
EPHA4	Del_4q34.3	0.765	1
EPHA7	Del_9p23	0.765	1
KEL	6p-Del	0.765	1
PDGFRA	Del_10q21.1	0.765	1
PTPN22	Del_10q21.1	0.765	1
TRERF1	Del_10q21.1	0.765	1
22q-Amp	Del_5q31.3	0.765	1
ALPK2	Amp_15q26.2	0.766	1
BTK	8q-Amp	0.766	1
BTK	Amp_7p22.1	0.766	1
BTK	Del_16q24.3	0.766	1
CAMTA1	6p-Amp	0.766	1
CNTN5	DMC1	0.766	1
CTNNA3	CYP3A5	0.766	1
CTNNB1	Amp_22q13.2	0.766	1
KYNU	Amp_22q13.2	0.766	1
NAP1L2	6p-Amp	0.766	1
NUP214	Del_16q24.3	0.766	1
THSD7B	Del_1p36.31	0.766	1
TP63	Amp_4q12	0.766	1
TP63	Amp_12q15	0.766	1
TPTE	Amp_1q21.3	0.766	1
USH2A	8q-Amp	0.766	1
USH2A	Del_16q24.3	0.766	1
ZFX	Amp_7p22.1	0.766	1
ZFX	Del_16q24.3	0.766	1
8q-Amp	Amp_12q15	0.766	1
Amp_12q15	Del_16q24.3	0.766	1
BRAF	Del_16p13.3	0.767	1
CDKN2A	Del_16q23.1	0.767	1
DSG3	8q-Amp	0.767	1
HSD11B1	Del_13q34	0.767	1
RPTN	Del_16p13.3	0.767	1
STK19	Del_13q34	0.767	1
GUCY2F	Del_10q21.1	0.768	1
HSD11B1	Amp_7q34	0.768	1
PARM1	Del_10q21.1	0.768	1
RPTN	Amp_7p22.1	0.768	1
SLC27A5	Del_10q26.3	0.768	1
STK19	Amp_7q34	0.768	1
USP17L2	8q-Amp	0.768	1
ZNF780B	Del_10q26.3	0.768	1
ATP5F1	Del_6q26	0.769	1
C10orf54	11p-Del	0.769	1
C15orf23	20q-Amp	0.769	1
CDK4	DSG3	0.769	1
CYP3A4	Del_15q21.1	0.769	1
DDX3X	Del_15q21.1	0.769	1
GLI1	Del_10p15.3	0.769	1
GUCY2F	17p-Del	0.769	1
KEL	Amp_5p15.33	0.769	1
KRT73	Del_10p15.3	0.769	1
LGR6	Del_8p23.3	0.769	1
NUDT11	11p-Del	0.769	1
OR6C74	Del_16q23.1	0.769	1
OXA1L	11p-Del	0.769	1
PPP6C	Del_8p23.3	0.769	1
PPP6C	Del_15q21.1	0.769	1
PTPN11	TP53	0.769	1
RAC1	Del_15q21.1	0.769	1
TTN	Amp_1p12	0.769	1
USP17L2	Del_10q23.31	0.769	1
USP17L2	Del_16p13.3	0.769	1
ARID2	Amp_1p12	0.77	1
ARID2	Del_15q13.3	0.77	1
C7orf58	Amp_1p12	0.77	1
KRTAP5-10	Del_15q13.3	0.77	1
MSTN	Amp_1p12	0.77	1
MSTN	Del_15q13.3	0.77	1
SLC27A5	Amp_1p12	0.77	1
SLC27A5	Del_15q13.3	0.77	1
ZNF780B	Del_15q13.3	0.77	1
11p-Del	Amp_3p13	0.77	1
Amp_3p13	Del_6q21	0.77	1
CTNNA3	Del_5q12.1	0.771	1
EPHA7	Amp_6p24.3	0.771	1
KEL	7q-Amp	0.771	1
NF1	Del_15q21.1	0.771	1
14q-Del	Amp_3p13	0.771	1
Del_9p21.3	Del_Xp21.1	0.771	1
C15orf23	6p-Del	0.772	1
C15orf23	Amp_11q13.3	0.772	1
CCNA1	SLC38A4	0.772	1
CPA3	RAC1	0.772	1
DDX3X	LGR6	0.772	1
DDX3X	RAC1	0.772	1
EPHA4	13q-Amp	0.772	1
EZH2	SELP	0.772	1
GUCY2F	6p-Del	0.772	1
GUCY2F	Amp_11q13.3	0.772	1
KCND2	Del_5q31.3	0.772	1
LGR6	Amp_6q12	0.772	1
NGF	Del_6q26	0.772	1
NRAS	RAC1	0.772	1
OR6C74	Del_6q26	0.772	1
RQCD1	Del_6q26	0.772	1
SLC27A5	Amp_8q24.21	0.772	1
13q-Amp	6p-Del	0.772	1
13q-Amp	Amp_11q13.3	0.772	1
Amp_17q25.3	Del_3q13.31	0.772	1
Amp_17q25.3	Del_19p13.3	0.772	1
ACSBG1	7q-Amp	0.773	1
APCS	Del_10q23.31	0.773	1
CAMTA1	MAP2K1	0.773	1
CAMTA1	Amp_15q26.2	0.773	1
CTNNB1	PTEN	0.773	1
CYP3A5	Del_10q23.31	0.773	1
KYNU	22q-Amp	0.773	1
MAP2K1	NAP1L2	0.773	1
MAP2K1	PTEN	0.773	1
PTEN	Amp_15q26.2	0.773	1
CNTN5	Amp_6p24.3	0.774	1
DMC1	FLT1	0.774	1
DMC1	KEL	0.774	1
DMC1	Del_1p36.31	0.774	1
GML	Del_1p36.31	0.774	1
THSD7B	Del_16q23.1	0.774	1
CDK4	Del_10q21.1	0.775	1
NUDT11	Del_10q21.1	0.775	1
PTPN11	Del_10q21.1	0.775	1
SLC38A4	6p-Amp	0.775	1
APC	Del_16q23.1	0.776	1
BRAF	C10orf28	0.776	1
EPHA6	6q-Del	0.776	1
FRMPD4	Del_16q24.3	0.776	1
RB1	Amp_6p24.3	0.776	1
RELN	Amp_1p12	0.776	1
1q-Amp	5q-Del	0.776	1
8p-Amp	Del_16q23.1	0.776	1
5q-Del	Amp_17q25.3	0.776	1
EPHA6	6p-Del	0.777	1
TP53	Amp_15q26.2	0.777	1
ALPK2	Del_15q21.1	0.778	1
BTK	20p-Amp	0.778	1
BTK	Del_2q37.3	0.778	1
C15orf23	9p-Del	0.778	1
FGFR2	Amp_4q12	0.778	1
GUCY2F	9p-Del	0.778	1
IDH1	NBPF1	0.778	1
IDH1	20p-Amp	0.778	1
MAN1A1	18p-Del	0.778	1
NBPF1	Amp_4q12	0.778	1
NF1	Amp_22q13.2	0.778	1
NGF	6p-Amp	0.778	1
POTEG	Amp_4q12	0.778	1
RQCD1	SLC9A11	0.778	1
USH2A	Amp_22q13.2	0.778	1
ZFX	Del_2q37.3	0.778	1
18p-Del	Amp_12q15	0.778	1
C7orf58	6p-Del	0.779	1
C7orf58	Amp_11q13.3	0.779	1
CCK	TPTE	0.779	1
CYP3A4	Amp_7p22.1	0.779	1
KRTAP5-10	20q-Amp	0.779	1
KRTAP5-10	17p-Del	0.779	1
KRTAP5-10	Amp_5p15.33	0.779	1
MSTN	20q-Amp	0.779	1
NRAS	Del_10q21.1	0.779	1
PPP6C	Amp_7p22.1	0.779	1
SLC27A5	Amp_5p15.33	0.779	1
APC	Amp_3p13	0.78	1
C7orf58	Del_5q31.3	0.78	1
CTNNA3	Del_5p15.31	0.78	1
CTNNB1	Del_10p15.3	0.78	1
EPHA6	Amp_1q44	0.78	1
MAP2K1	Del_10p15.3	0.78	1
OR4S2	Del_19p13.3	0.78	1
PDGFRA	Amp_3p13	0.78	1
TP53	9p-Del	0.78	1
USP9X	Del_3q13.31	0.78	1
Amp_8q24.21	Del_5q12.1	0.78	1
DMC1	XIRP2	0.781	1
IGF1R	9p-Del	0.781	1
NUDT11	THSD7B	0.781	1
SYK	9p-Del	0.781	1
APC	Del_9p23	0.782	1
APCS	COL3A1	0.782	1
APCS	11q-Del	0.782	1
CYP3A4	Amp_1p12	0.782	1
CYP3A4	Del_15q13.3	0.782	1
KRTAP5-10	Del_10q23.31	0.782	1
LGR6	Amp_1p12	0.782	1
NRAS	Del_19p13.3	0.782	1
PPP6C	Del_15q13.3	0.782	1
PTPN22	Del_9p23	0.782	1
TTN	Del_16q12.1	0.782	1
Amp_1p12	Amp_6q12	0.782	1
ARID2	DMC1	0.783	1
C15orf23	9q-Del	0.783	1
CDC42BPA	16q-Del	0.783	1
CPA3	Del_9p21.3	0.783	1
EPHA7	7p-Amp	0.783	1
GML	Del_5q12.1	0.783	1
GUCY2F	Amp_1q21.3	0.783	1
KIT	16q-Del	0.783	1
KRT73	16q-Del	0.783	1
MYO3B	Amp_1p12	0.783	1
PARM1	9q-Del	0.783	1
RIPK4	16q-Del	0.783	1
SLC38A4	7p-Amp	0.783	1
TTN	Del_6q26	0.783	1
13q-Amp	9q-Del	0.783	1
Amp_22q13.2	Del_19p13.3	0.783	1
CCNA1	Del_10q21.1	0.784	1
CDC42BPA	Del_10q21.1	0.784	1
CDK4	TP63	0.784	1
CDK4	Del_16q24.3	0.784	1
EPHA6	20q-Amp	0.784	1
EPHA6	17p-Del	0.784	1
GUCY2F	11q-Del	0.784	1
KIT	USH2A	0.784	1
KIT	Del_10q21.1	0.784	1
NUDT11	8q-Amp	0.784	1
OXA1L	8q-Amp	0.784	1
PTPN11	8q-Amp	0.784	1
PTPN11	Del_16q24.3	0.784	1
RPTN	5q-Del	0.784	1
USH2A	Del_6q21	0.784	1
BTK	Amp_8q24.21	0.785	1
CDC42BPA	7p-Amp	0.785	1
DCLK3	Del_14q23.3	0.785	1
FLT1	Del_16q24.3	0.785	1
KRT73	7p-Amp	0.785	1
NBPF1	Del_14q23.3	0.785	1
RIPK4	7p-Amp	0.785	1
RPTN	20p-Amp	0.785	1
RPTN	18p-Del	0.785	1
RPTN	Del_2q37.3	0.785	1
THSD7B	Del_Xp21.1	0.785	1
ZFX	Amp_8q24.21	0.785	1
20p-Amp	Del_14q23.3	0.785	1
ANO4	Del_4p16.3	0.786	1
TRERF1	Del_6q26	0.786	1
USH2A	14q-Del	0.786	1
XIRP2	Amp_1q44	0.786	1
COL3A1	Del_1p36.31	0.787	1
CTNNA3	Del_8p23.3	0.787	1
CTNNB1	TRERF1	0.787	1
KYNU	8p-Amp	0.787	1
MAP2K1	TRERF1	0.787	1
MAP2K1	8p-Amp	0.787	1
MAP2K1	Del_5p15.31	0.787	1
MSTN	9q-Del	0.787	1
SLC27A5	Amp_1q21.3	0.787	1
THSD7B	17p-Del	0.787	1
TRERF1	Amp_15q26.2	0.787	1
ZNF780B	9q-Del	0.787	1
Amp_15q26.2	Del_5p15.31	0.787	1
EPHA7	Del_3q13.31	0.788	1
GML	10q-Del	0.788	1
IGF1R	10p-Del	0.788	1
KCND2	9p-Del	0.788	1
SELP	Del_3q13.31	0.788	1
SELP	Del_19p13.3	0.788	1
SYK	10p-Del	0.788	1
TP63	Amp_8q24.21	0.788	1
XIRP2	Amp_22q13.2	0.788	1
ACSBG1	Del_1p22.1	0.789	1
BTK	Del_6q26	0.789	1
C7orf58	20q-Amp	0.789	1
C7orf58	Amp_5p15.33	0.789	1
CYP3A5	MPP7	0.789	1
CYP3A5	Amp_17q25.3	0.789	1
CYP3A5	Del_1p22.1	0.789	1
CYP3A5	Del_4p16.3	0.789	1
DDX3X	6p-Del	0.789	1
DDX3X	Amp_11q13.3	0.789	1
IGF1R	Amp_17q25.3	0.789	1
IGF1R	Del_4p16.3	0.789	1
KEL	Amp_13q31.3	0.789	1
LGR6	Amp_11q13.3	0.789	1
MLL	14q-Del	0.789	1
MSTN	9p-Del	0.789	1
PPP6C	6p-Del	0.789	1
RAC1	Amp_11q13.3	0.789	1
USP17L2	Del_4q34.3	0.789	1
ZNF780B	9p-Del	0.789	1
20q-Amp	14q-Del	0.789	1
16q-Del	Amp_1q44	0.789	1
BRAF	DCLK3	0.79	1
MYO16	Amp_8q24.21	0.79	1
PTEN	TTN	0.79	1
SLC9A11	Del_10q21.1	0.79	1
USH2A	6p-Amp	0.79	1
11q-Del	Amp_22q13.2	0.79	1
FRMPD4	Del_10q26.3	0.791	1
IDH1	Del_13q34	0.791	1
KCND2	Del_5q12.1	0.791	1
NUP214	Del_12q23.3	0.791	1
NUP214	Del_13q34	0.791	1
SLC9A11	Amp_12q14.1	0.791	1
SLC9A11	Del_16p13.3	0.791	1
STK19	Amp_3p13	0.791	1
CDKN2A	Del_12q23.3	0.792	1
CDKN2A	Del_13q34	0.792	1
LGR6	Del_10p15.3	0.792	1
PDGFRA	Del_10q26.3	0.792	1
XIRP2	6p-Amp	0.792	1
ANO4	Amp_8q24.21	0.793	1
CAMTA1	Del_4p16.3	0.793	1
DMC1	NF1	0.793	1
EZH2	5q-Del	0.793	1
FLT1	Del_1p22.1	0.793	1
GLI1	5q-Del	0.793	1
GML	Del_15q21.1	0.793	1
GUCY2F	Amp_7q34	0.793	1
KEL	Del_1p22.1	0.793	1
MPP7	Del_1p36.31	0.793	1
MPP7	Del_4q34.3	0.793	1
NAP1L2	Del_1p22.1	0.793	1
NAP1L2	Del_4p16.3	0.793	1
RAC1	Del_5q31.3	0.793	1
RIPK4	5q-Del	0.793	1
22q-Amp	Amp_17q25.3	0.793	1
22q-Amp	Del_1p22.1	0.793	1
ANO4	PTEN	0.794	1
ANO4	22q-Amp	0.794	1
C15orf23	Del_14q23.3	0.794	1
CNTN5	18p-Del	0.794	1
EMG1	7q-Amp	0.794	1
IDH1	6q-Del	0.794	1
KEL	Amp_7q34	0.794	1
KRTAP5-10	Amp_7q34	0.794	1
MSTN	Amp_7q34	0.794	1
NRAS	Del_15q13.3	0.794	1
OR4S2	22q-Amp	0.794	1
PARM1	1q-Amp	0.794	1
PARM1	Del_14q23.3	0.794	1
PTEN	USP9X	0.794	1
SLC27A5	Amp_7q34	0.794	1
THSD7B	Amp_22q13.2	0.794	1
CPA3	20q-Amp	0.795	1
DDX3X	17p-Del	0.795	1
MYO16	5q-Del	0.795	1
PPP6C	17p-Del	0.795	1
PPP6C	Amp_5p15.33	0.795	1
RAC1	Amp_5p15.33	0.795	1
SELP	5q-Del	0.795	1
SLC38A4	5q-Del	0.795	1
SLC9A11	Del_10q26.3	0.795	1
7q-Amp	Del_5q12.1	0.795	1
APCS	Del_6q21	0.796	1
CNTN5	GNAQ	0.796	1
DSG3	Del_19p13.3	0.796	1
GUCY2F	Del_6q21	0.796	1
MSTN	Del_16q12.1	0.796	1
OR6C74	10p-Del	0.796	1
SLC27A5	Del_14q23.3	0.796	1
THSD7B	Amp_3p13	0.796	1
10p-Del	Amp_5p15.33	0.796	1
ALPK2	Del_10q26.3	0.797	1
CTNNB1	USH2A	0.797	1
EPHA6	Amp_4q12	0.797	1
KIT	TTN	0.797	1
SLC9A11	16q-Del	0.797	1
22q-Amp	10p-Del	0.797	1
BRAF	CAMTA1	0.798	1
FRMPD4	17p-Del	0.798	1
KYNU	8q-Amp	0.798	1
MAP2K1	Del_16q24.3	0.798	1
RELN	Del_3q13.31	0.798	1
ALPK2	Del_15q13.3	0.799	1
COL3A1	Del_16q12.1	0.799	1
CTNNA3	Del_2q37.3	0.799	1
CYP3A5	SLC38A4	0.799	1
DCLK3	Amp_3p13	0.799	1
FGFR2	Amp_3p13	0.799	1
FGFR2	Del_16q23.1	0.799	1
IGF1R	SELP	0.799	1
NBPF1	Del_16q23.1	0.799	1
RPTN	11q-Del	0.799	1
TRERF1	Amp_6p24.3	0.799	1
Amp_12q14.1	Del_19p13.3	0.799	1
ANO4	Amp_22q13.2	0.8	1
C10orf28	Del_10q23.31	0.8	1
CPA3	Amp_8q24.21	0.8	1
CTNNA3	Del_16q24.3	0.8	1
CTNNB1	FGFR2	0.8	1
CTNNB1	20p-Amp	0.8	1
CTNNB1	18p-Del	0.8	1
EMG1	Del_10q23.31	0.8	1
FGFR2	MAP2K1	0.8	1
FRMPD4	Del_13q34	0.8	1
IDH1	Del_11q23.3	0.8	1
MAP2K1	POTEG	0.8	1
POTEG	Amp_15q26.2	0.8	1
PPP6C	Amp_8q24.21	0.8	1
ZFX	Del_11q23.3	0.8	1
Amp_3p13	Del_16q24.3	0.8	1
CBL	Amp_20q13.33	0.801	1
CBL	Amp_22q13.2	0.801	1
NRAS	Del_16q24.3	0.801	1
RB1	Amp_22q13.2	0.801	1
RQCD1	Amp_20q13.33	0.801	1
Amp_20q13.33	Del_4p16.3	0.801	1
ANO4	20q-Amp	0.802	1
ARID2	Amp_13q31.3	0.802	1
CNTN5	Del_5q12.1	0.802	1
HSD11B1	Amp_1q44	0.802	1
THSD7B	7p-Amp	0.802	1
THSD7B	Del_6q26	0.802	1
USH2A	16q-Del	0.802	1
1q-Amp	Del_4q34.3	0.802	1
Amp_1q21.3	Amp_12q15	0.802	1
CCNA1	Del_1p36.31	0.803	1
CDC42BPA	Del_4q34.3	0.803	1
CTNNA3	Amp_1p12	0.803	1
FRMPD4	Amp_4q12	0.803	1
KIT	Del_4q34.3	0.803	1
KRT73	Del_1p36.31	0.803	1
MYO3B	ZFX	0.803	1
MYO3B	10p-Del	0.803	1
MYO3B	Amp_4q12	0.803	1
MYO3B	Amp_12q15	0.803	1
POTEG	Del_10q21.1	0.803	1
USH2A	20p-Amp	0.803	1
DDX3X	7q-Amp	0.804	1
LGR6	7q-Amp	0.804	1
RAC1	7q-Amp	0.804	1
RPTN	Del_1p36.31	0.804	1
XIRP2	22q-Amp	0.804	1
XIRP2	Del_9p23	0.804	1
Amp_6p24.3	Del_5q31.3	0.804	1
CDK4	EPHA6	0.805	1
CYP3A4	Amp_13q31.3	0.805	1
DDX3X	USP17L2	0.805	1
DMC1	Amp_7p22.1	0.805	1
EPHA6	NUDT11	0.805	1
KRTAP5-10	Del_16q23.1	0.805	1
MSTN	Del_16q23.1	0.805	1
SLC9A11	Del_16q12.1	0.805	1
USP17L2	Amp_6q12	0.805	1
XIRP2	Del_5q31.3	0.805	1
C10orf28	9p-Del	0.806	1
GUCY2F	Del_16q23.1	0.806	1
NRAS	10q-Del	0.806	1
PDGFRA	7q-Amp	0.806	1
PTPN22	7q-Amp	0.806	1
THSD7B	Amp_15q26.2	0.806	1
TTN	11p-Del	0.806	1
Amp_3p13	Amp_7p22.1	0.806	1
Amp_7q34	Del_12q23.3	0.806	1
C15orf23	Del_9p23	0.807	1
CDKN2A	Amp_6q12	0.807	1
MYO3B	Del_9p23	0.807	1
NAP1L2	Amp_22q13.2	0.807	1
OR4S2	8p-Amp	0.807	1
OR4S2	11p-Del	0.807	1
PARM1	Del_9p23	0.807	1
TPTE	6p-Amp	0.807	1
TPTE	Amp_1p12	0.807	1
USP9X	11p-Del	0.807	1
EPHA7	PTEN	0.808	1
EPHA7	22q-Amp	0.808	1
PTEN	SELP	0.808	1
CBL	11p-Del	0.809	1
DSG3	OR6C74	0.809	1
DSG3	RB1	0.809	1
DSG3	RQCD1	0.809	1
NGF	11p-Del	0.809	1
OR6C74	11p-Del	0.809	1
RB1	11p-Del	0.809	1
6q-Del	Amp_6q12	0.809	1
ARID2	11q-Del	0.81	1
ARID2	Del_4p16.3	0.81	1
C7orf58	Amp_17q25.3	0.81	1
SELP	10p-Del	0.81	1
XIRP2	Del_Xp21.1	0.81	1
ZFX	Amp_7q34	0.81	1
14q-Del	Amp_17q25.3	0.81	1
Amp_3p13	Del_9p21.3	0.81	1
BRAF	RIPK4	0.811	1
DMC1	17p-Del	0.811	1
DMC1	Amp_5p15.33	0.811	1
EPHA6	Amp_7q34	0.811	1
GML	20q-Amp	0.811	1
GML	17p-Del	0.811	1
LGR6	Del_10q21.1	0.811	1
MPP7	8p-Amp	0.811	1
PDGFRA	Amp_17q25.3	0.811	1
PTPN22	Amp_17q25.3	0.811	1
PTPN22	Del_1p22.1	0.811	1
THSD7B	Del_6q21	0.811	1
TRERF1	Amp_17q25.3	0.811	1
TRERF1	Del_1p22.1	0.811	1
XIRP2	5q-Del	0.811	1
8p-Amp	Del_1p22.1	0.811	1
8p-Amp	Del_4p16.3	0.811	1
ALPK2	Del_9p21.3	0.812	1
EZH2	14q-Del	0.812	1
KIT	14q-Del	0.812	1
KRT73	14q-Del	0.812	1
MAP2K1	Del_12q23.3	0.812	1
RIPK4	Del_5q12.1	0.812	1
SLC27A5	6p-Amp	0.812	1
TP53	11q-Del	0.812	1
ZNF780B	6p-Amp	0.812	1
Amp_15q26.2	Del_12q23.3	0.812	1
ANO4	Del_16p13.3	0.813	1
BRAF	FLT1	0.813	1
BRAF	KEL	0.813	1
CAMTA1	Amp_12q14.1	0.813	1
DCLK3	6p-Amp	0.813	1
FGFR2	6p-Amp	0.813	1
FRMPD4	6q-Del	0.813	1
HSD11B1	Del_10q26.3	0.813	1
MPP7	STK19	0.813	1
MYO3B	Del_10q23.31	0.813	1
PDGFRA	Del_10q23.31	0.813	1
RELN	Del_6q21	0.813	1
SLC9A11	18p-Del	0.813	1
STK19	Amp_17q25.3	0.813	1
STK19	Del_1p22.1	0.813	1
TRERF1	Del_10q23.31	0.813	1
22q-Amp	Del_16p13.3	0.813	1
BTK	CTNNA3	0.814	1
BTK	Amp_3p13	0.814	1
CAMTA1	10q-Del	0.814	1
COL3A1	Amp_6q12	0.814	1
CTNNA3	Amp_4q12	0.814	1
DDX3X	11q-Del	0.814	1
KCND2	20p-Amp	0.814	1
NUP214	Amp_3p13	0.814	1
RELN	13q-Amp	0.814	1
DSG3	Del_1p22.1	0.815	1
EPHA7	Amp_1q21.3	0.815	1
LGR6	Del_10q23.31	0.815	1
SLC38A4	Amp_1q21.3	0.815	1
11p-Del	Amp_17q25.3	0.815	1
BTK	10q-Del	0.816	1
CTNNA3	Del_12q23.3	0.816	1
EMG1	Del_6q21	0.816	1
MAN1A1	10q-Del	0.816	1
NRAS	Amp_22q13.2	0.816	1
5q-Del	Del_3q13.31	0.816	1
5q-Del	Del_19p13.3	0.816	1
Amp_3p13	Del_12q23.3	0.816	1
Amp_3p13	Del_13q34	0.816	1
ANO4	8p-Amp	0.817	1
ANO4	Del_5p15.31	0.817	1
BRAF	6p-Del	0.817	1
C15orf23	6p-Amp	0.817	1
C15orf23	Del_3q13.31	0.817	1
C15orf23	Del_19p13.3	0.817	1
COL3A1	11q-Del	0.817	1
GUCY2F	Del_3q13.31	0.817	1
PARM1	6p-Amp	0.817	1
SLC9A11	13q-Amp	0.817	1
USH2A	Del_15q21.1	0.817	1
13q-Amp	Del_19p13.3	0.817	1
ANO4	11p-Del	0.818	1
CPA3	Del_16q12.1	0.818	1
CTNNA3	Amp_5p15.33	0.818	1
CYP3A4	Del_14q23.3	0.818	1
EPHA4	Amp_5p15.33	0.818	1
LGR6	Del_16q12.1	0.818	1
MLL	6p-Del	0.818	1
MLL	Amp_3p13	0.818	1
RPTN	Amp_6q12	0.818	1
STK19	11q-Del	0.818	1
SYK	Del_10p15.3	0.818	1
TP63	Del_5q31.3	0.818	1
17p-Del	Amp_11q13.3	0.818	1
Amp_6p24.3	Del_16q24.3	0.818	1
ALPK2	20q-Amp	0.819	1
ALPK2	Amp_22q13.2	0.819	1
APCS	5q-Del	0.819	1
DCLK3	Del_5q31.3	0.819	1
FGFR2	Del_5q31.3	0.819	1
LGR6	Amp_1q21.3	0.819	1
MLL	Amp_22q13.2	0.819	1
USP9X	18p-Del	0.819	1
17p-Del	Amp_20q13.33	0.819	1
OR4S2	Del_10q23.31	0.82	1
OR6C74	Del_10p15.3	0.82	1
PTEN	11p-Del	0.82	1
TPTE	Del_3q13.31	0.82	1
TTN	Del_10q23.31	0.82	1
USP9X	Del_10q23.31	0.82	1
CCNA1	Del_8p23.3	0.821	1
CDC42BPA	Del_15q21.1	0.821	1
EPHA4	Del_5q31.3	0.821	1
EZH2	Del_8p23.3	0.821	1
GLI1	Del_8p23.3	0.821	1
KIT	Del_8p23.3	0.821	1
KRT73	Del_15q21.1	0.821	1
MSTN	Amp_1q44	0.821	1
USP17L2	Amp_11q13.3	0.821	1
CDK4	10q-Del	0.822	1
EPHA7	Amp_20q13.33	0.822	1
EPHA7	Amp_22q13.2	0.822	1
NAP1L2	16q-Del	0.822	1
PTPN11	10q-Del	0.822	1
RPTN	Del_5q12.1	0.822	1
THSD7B	11p-Del	0.822	1
22q-Amp	16q-Del	0.822	1
Amp_1q44	Del_16q23.1	0.822	1
Amp_7q34	Del_5q12.1	0.822	1
ALPK2	Amp_12q14.1	0.823	1
APC	9p-Del	0.823	1
ATP5F1	Amp_7p22.1	0.823	1
CBL	TP63	0.823	1
CBL	8q-Amp	0.823	1
CCK	Amp_7p22.1	0.823	1
FAM58A	Amp_7p22.1	0.823	1
KRAS	Amp_7p22.1	0.823	1
MAP2K1	MYO3B	0.823	1
NGF	8q-Amp	0.823	1
NGF	Del_16q24.3	0.823	1
NRAS	Amp_5p15.33	0.823	1
OR4S2	Del_10p15.3	0.823	1
OR6C74	Del_16q24.3	0.823	1
PDGFRA	Amp_7p22.1	0.823	1
Amp_7p22.1	Del_5p15.31	0.823	1
Amp_22q13.2	Del_16p13.3	0.823	1
ALPK2	Amp_1q44	0.824	1
C15orf23	Del_11q23.3	0.824	1
CCK	Del_9p23	0.824	1
COL3A1	Del_1p22.1	0.824	1
LGR6	1q-Amp	0.824	1
MYO3B	9p-Del	0.824	1
MYO3B	9q-Del	0.824	1
PPP6C	9p-Del	0.824	1
9p-Del	Amp_6q12	0.824	1
APC	Del_16p13.3	0.825	1
DMC1	6q-Del	0.825	1
EPHA6	Del_14q23.3	0.825	1
IDH1	KCND2	0.825	1
KCND2	Amp_12q15	0.825	1
MPP7	Del_15q21.1	0.825	1
PDGFRA	Del_16p13.3	0.825	1
XIRP2	7p-Amp	0.825	1
8p-Amp	Amp_12q14.1	0.825	1
8p-Amp	Del_16p13.3	0.825	1
CNTN5	Del_15q21.1	0.826	1
EPHA7	8p-Amp	0.826	1
EPHA7	Del_5p15.31	0.826	1
FLT1	Del_9p21.3	0.826	1
FRMPD4	NRAS	0.826	1
MYO16	8p-Amp	0.826	1
SLC9A11	7q-Amp	0.826	1
USH2A	Del_10p15.3	0.826	1
USP17L2	10q-Del	0.826	1
XIRP2	Del_6q21	0.826	1
ANO4	16q-Del	0.827	1
CTNNB1	EPHA6	0.827	1
EPHA6	Amp_15q26.2	0.827	1
GML	Del_10q26.3	0.827	1
GML	Del_14q23.3	0.827	1
GML	Del_16q12.1	0.827	1
MYO16	Del_5q12.1	0.827	1
MYO3B	Del_14q23.3	0.827	1
USP9X	9p-Del	0.827	1
ZNF780B	Amp_6p24.3	0.827	1
ACSBG1	Del_1p36.31	0.828	1
DCLK3	Del_6q26	0.828	1
EPHA7	Amp_7q34	0.828	1
IGF1R	Del_4q34.3	0.828	1
MYO16	Amp_7q34	0.828	1
SYK	Del_1p36.31	0.828	1
7p-Amp	Del_16q24.3	0.828	1
BRAF	PARM1	0.829	1
C10orf28	TPTE	0.829	1
CPA3	Del_16q23.1	0.829	1
FGFR2	Del_1p22.1	0.829	1
FGFR2	Del_4p16.3	0.829	1
FLT1	Del_3q13.31	0.829	1
KEL	Del_3q13.31	0.829	1
POTEG	Amp_17q25.3	0.829	1
PTPN22	1q-Amp	0.829	1
RELN	Del_1p36.31	0.829	1
TRERF1	1q-Amp	0.829	1
USH2A	10q-Del	0.829	1
Amp_1q21.3	Del_14q23.3	0.829	1
Amp_6q12	Del_16q23.1	0.829	1
Del_1p36.31	Del_3q13.31	0.829	1
ALPK2	8p-Amp	0.83	1
APC	Amp_22q13.2	0.83	1
C15orf23	CAMTA1	0.83	1
C15orf23	PTEN	0.83	1
CCNA1	Amp_1p12	0.83	1
CDC42BPA	Amp_1p12	0.83	1
CDC42BPA	Del_15q13.3	0.83	1
GUCY2F	PTEN	0.83	1
GUCY2F	Amp_1q44	0.83	1
KCND2	Amp_6p24.3	0.83	1
KRT73	Amp_1p12	0.83	1
KRT73	Del_15q13.3	0.83	1
NAP1L2	13q-Amp	0.83	1
NUDT11	Del_5q31.3	0.83	1
PARM1	Amp_1q44	0.83	1
PDGFRA	Amp_22q13.2	0.83	1
POTEG	Del_10q26.3	0.83	1
PTPN11	Del_5q31.3	0.83	1
TPTE	Amp_5p15.33	0.83	1
TRERF1	10p-Del	0.83	1
TRERF1	Del_11q23.3	0.83	1
13q-Amp	22q-Amp	0.83	1
Amp_11q13.3	Del_10p15.3	0.83	1
NF1	Del_9p21.3	0.831	1
OR4S2	Del_13q34	0.831	1
ACSBG1	Del_10q21.1	0.832	1
BRAF	CTNNA3	0.832	1
BRAF	MSTN	0.832	1
BRAF	SLC27A5	0.832	1
FAM58A	Amp_8q24.21	0.832	1
FRMPD4	Amp_3p13	0.832	1
KRAS	Amp_8q24.21	0.832	1
MAN1A1	Del_5q31.3	0.832	1
MYO3B	Amp_3p13	0.832	1
OR6C74	Del_10q21.1	0.832	1
SYK	Del_10q21.1	0.832	1
ZFX	Del_5q31.3	0.832	1
CPA3	Del_3q13.31	0.833	1
CYP3A4	Del_3q13.31	0.833	1
DDX3X	Del_19p13.3	0.833	1
DSG3	Del_16p13.3	0.833	1
HSD11B1	16q-Del	0.833	1
KCND2	Amp_7p22.1	0.833	1
PARM1	7p-Amp	0.833	1
PPP6C	Del_19p13.3	0.833	1
RELN	Del_6q26	0.833	1
THSD7B	Del_3q13.31	0.833	1
THSD7B	Del_19p13.3	0.833	1
6p-Amp	Del_13q34	0.833	1
6q-Del	Amp_22q13.2	0.833	1
Amp_6q12	Del_19p13.3	0.833	1
CNTN5	Amp_1q21.3	0.834	1
CTNNA3	KYNU	0.834	1
CTNNA3	MAP2K1	0.834	1
DSG3	20q-Amp	0.834	1
DSG3	Amp_5p15.33	0.834	1
MAP2K1	Amp_3p13	0.834	1
NF1	9q-Del	0.834	1
STK19	9p-Del	0.834	1
11p-Del	Amp_5p15.33	0.834	1
BTK	Amp_17q25.3	0.835	1
BTK	Del_4p16.3	0.835	1
IDH1	Amp_17q25.3	0.835	1
MPP7	Amp_4q12	0.835	1
NAP1L2	9q-Del	0.835	1
NUP214	Del_4p16.3	0.835	1
PTEN	9q-Del	0.835	1
ZFX	Del_4p16.3	0.835	1
DSG3	Amp_20q13.33	0.836	1
KCND2	20q-Amp	0.836	1
NUDT11	7q-Amp	0.836	1
S100A8	7q-Amp	0.836	1
USH2A	Del_13q34	0.836	1
ACSBG1	14q-Del	0.837	1
ACSBG1	Del_5q12.1	0.837	1
APCS	Del_5q12.1	0.837	1
APCS	Del_6q26	0.837	1
ARID2	SYK	0.837	1
ATP5F1	6q-Del	0.837	1
CCK	6q-Del	0.837	1
COL3A1	Amp_1q21.3	0.837	1
DCLK3	Amp_12q14.1	0.837	1
DCLK3	Del_16p13.3	0.837	1
NBPF1	Amp_12q14.1	0.837	1
NBPF1	Del_16p13.3	0.837	1
POTEG	Amp_12q14.1	0.837	1
RB1	THSD7B	0.837	1
TTN	10q-Del	0.837	1
20p-Amp	Del_16p13.3	0.837	1
18p-Del	Amp_12q14.1	0.837	1
ANO4	18p-Del	0.838	1
CAMTA1	Del_10p15.3	0.838	1
CCNA1	MLL	0.838	1
CCNA1	20q-Amp	0.838	1
CCNA1	17p-Del	0.838	1
CDC42BPA	20q-Amp	0.838	1
CDC42BPA	Amp_5p15.33	0.838	1
GML	Amp_7q34	0.838	1
KIT	MLL	0.838	1
KIT	17p-Del	0.838	1
KRT73	20q-Amp	0.838	1
KRT73	Amp_5p15.33	0.838	1
TPTE	Amp_3p13	0.838	1
USP9X	Del_10q21.1	0.838	1
22q-Amp	Del_10p15.3	0.838	1
CDC42BPA	10q-Del	0.839	1
GML	Del_10q23.31	0.839	1
KIT	10q-Del	0.839	1
KYNU	Amp_1q21.3	0.839	1
MAP2K1	9q-Del	0.839	1
MYO3B	10q-Del	0.839	1
NF1	Del_14q23.3	0.839	1
PTPN22	16q-Del	0.839	1
RPTN	Del_15q21.1	0.839	1
Amp_22q13.2	Del_9p23	0.839	1
C15orf23	10q-Del	0.84	1
CPA3	6p-Amp	0.84	1
GUCY2F	10q-Del	0.84	1
IDH1	7q-Amp	0.84	1
NUP214	7q-Amp	0.84	1
PARM1	10q-Del	0.84	1
PPP6C	SLC9A11	0.84	1
TP53	Amp_8q24.21	0.84	1
USP9X	Amp_7p22.1	0.84	1
Amp_11q13.3	Del_14q23.3	0.84	1
APC	11p-Del	0.841	1
BRAF	OR4S2	0.841	1
BTK	Amp_1q44	0.841	1
COL3A1	6p-Del	0.841	1
KRTAP5-10	11p-Del	0.841	1
MLL	20q-Amp	0.841	1
MSTN	11p-Del	0.841	1
PTPN22	11p-Del	0.841	1
SLC27A5	11p-Del	0.841	1
TP53	8p-Amp	0.841	1
TTN	20q-Amp	0.841	1
ZFX	Amp_1q44	0.841	1
20q-Amp	17p-Del	0.841	1
16q-Del	Amp_22q13.2	0.841	1
17p-Del	Amp_5p15.33	0.841	1
Amp_15q26.2	Del_6q26	0.841	1
APC	13q-Amp	0.842	1
ARID2	Del_19p13.3	0.842	1
ATP5F1	9q-Del	0.842	1
ATP5F1	Amp_1q21.3	0.842	1
BTK	Del_9p21.3	0.842	1
C10orf54	11q-Del	0.842	1
CCK	9q-Del	0.842	1
EPHA7	18p-Del	0.842	1
FAM58A	9q-Del	0.842	1
FGFR2	11q-Del	0.842	1
GML	6p-Amp	0.842	1
GNAQ	Amp_1q21.3	0.842	1
HSD11B1	5q-Del	0.842	1
KRAS	9q-Del	0.842	1
MAN1A1	Del_9p21.3	0.842	1
NUDT11	11q-Del	0.842	1
NUP214	Del_9p21.3	0.842	1
OR4S2	Del_6q21	0.842	1
OXA1L	11q-Del	0.842	1
PARM1	Del_5p15.31	0.842	1
PTPN22	13q-Amp	0.842	1
RPTN	Amp_7q34	0.842	1
SLC38A4	Del_8p23.3	0.842	1
TP63	Amp_17q25.3	0.842	1
TRERF1	13q-Amp	0.842	1
IGF1R	Del_9p21.3	0.843	1
PTEN	TP63	0.843	1
PTEN	Del_16q24.3	0.843	1
THSD7B	11q-Del	0.843	1
TTN	Amp_3p13	0.843	1
Amp_8q24.21	Del_5p15.31	0.843	1
CNTN5	EMG1	0.844	1
EPHA7	Amp_4q12	0.844	1
IDH1	SELP	0.844	1
KCND2	MAP2K1	0.844	1
KEL	5q-Del	0.844	1
KRT73	Amp_7p22.1	0.844	1
KRTAP5-10	10p-Del	0.844	1
NRAS	Amp_12q14.1	0.844	1
NRAS	Del_16p13.3	0.844	1
PARM1	Del_9p21.3	0.844	1
SELP	Amp_4q12	0.844	1
SLC27A5	10p-Del	0.844	1
SLC38A4	Amp_12q15	0.844	1
TTN	Amp_8q24.21	0.844	1
CTNNA3	Del_16q12.1	0.845	1
MLL	Amp_1q44	0.845	1
Amp_3p13	Del_14q23.3	0.845	1
ACSBG1	Del_8p23.3	0.846	1
APCS	Del_15q21.1	0.846	1
CAMTA1	7p-Amp	0.846	1
CCK	Amp_7q34	0.846	1
CPA3	22q-Amp	0.846	1
DDX3X	NAP1L2	0.846	1
DMC1	Del_9p21.3	0.846	1
IGF1R	Del_8p23.3	0.846	1
LGR6	PTEN	0.846	1
LGR6	22q-Amp	0.846	1
PPP6C	PTEN	0.846	1
PTEN	RAC1	0.846	1
PTEN	TPTE	0.846	1
SYK	Del_15q21.1	0.846	1
TPTE	22q-Amp	0.846	1
ALPK2	13q-Amp	0.847	1
C15orf23	Amp_20q13.33	0.847	1
CAMTA1	Del_4q34.3	0.847	1
CTNNA3	Del_9p23	0.847	1
GUCY2F	Amp_22q13.2	0.847	1
NUDT11	1q-Amp	0.847	1
PARM1	Amp_20q13.33	0.847	1
PTPN11	1q-Amp	0.847	1
STK19	Del_6q21	0.847	1
THSD7B	Del_10p15.3	0.847	1
9p-Del	Del_Xp21.1	0.847	1
EPHA4	Del_19p13.3	0.848	1
EPHA7	Del_10q23.31	0.848	1
MAN1A1	Amp_6p24.3	0.848	1
ZFX	11q-Del	0.848	1
EPHA6	14q-Del	0.849	1
EPHA6	Del_5q12.1	0.849	1
NBPF1	Amp_7p22.1	0.849	1
PDGFRA	10q-Del	0.849	1
POTEG	Del_10q23.31	0.849	1
TTN	Del_16q23.1	0.849	1
22q-Amp	Del_9p23	0.849	1
ALPK2	20p-Amp	0.85	1
COL3A1	Del_16q24.3	0.85	1
CTNNA3	Del_11q23.3	0.85	1
DCLK3	Amp_20q13.33	0.85	1
EPHA4	Del_16q23.1	0.85	1
POTEG	Amp_20q13.33	0.85	1
POTEG	Amp_22q13.2	0.85	1
THSD7B	9q-Del	0.85	1
6p-Del	Amp_1q21.3	0.85	1
CBL	Del_9p21.3	0.851	1
CDKN2A	11p-Del	0.851	1
CTNNA3	Amp_1q21.3	0.851	1
HSD11B1	Del_1p36.31	0.851	1
NGF	Del_9p21.3	0.851	1
RQCD1	Del_9p21.3	0.851	1
TP63	Amp_12q14.1	0.851	1
USP17L2	Del_6q26	0.851	1
XIRP2	Amp_15q26.2	0.851	1
6p-Amp	14q-Del	0.851	1
Amp_12q14.1	Del_16q24.3	0.851	1
CDC42BPA	Del_9p23	0.852	1
COL3A1	Amp_1p12	0.852	1
FGFR2	1q-Amp	0.852	1
PDGFRA	5q-Del	0.852	1
PTPN11	Del_10q26.3	0.852	1
PTPN22	5q-Del	0.852	1
8p-Amp	5q-Del	0.852	1
ACSBG1	Amp_1p12	0.853	1
APC	6q-Del	0.853	1
BTK	16q-Del	0.853	1
C15orf23	20p-Amp	0.853	1
C15orf23	18p-Del	0.853	1
DSG3	16q-Del	0.853	1
EPHA6	Del_19p13.3	0.853	1
EZH2	Del_14q23.3	0.853	1
IGF1R	Amp_1p12	0.853	1
KIT	Del_14q23.3	0.853	1
KRT73	Del_14q23.3	0.853	1
KRT73	Del_16q12.1	0.853	1
MLL	Del_1p22.1	0.853	1
NF1	Del_19p13.3	0.853	1
NUP214	16q-Del	0.853	1
PARM1	20p-Amp	0.853	1
PARM1	18p-Del	0.853	1
PARM1	Del_2q37.3	0.853	1
POTEG	13q-Amp	0.853	1
RPTN	Amp_20q13.33	0.853	1
RPTN	Amp_22q13.2	0.853	1
SYK	Del_15q13.3	0.853	1
ZFX	16q-Del	0.853	1
20q-Amp	Del_4p16.3	0.853	1
8p-Amp	6q-Del	0.853	1
Amp_1q44	Del_19p13.3	0.853	1
ANO4	Del_16q23.1	0.854	1
CTNNB1	Amp_17q25.3	0.854	1
CTNNB1	Del_1p22.1	0.854	1
CTNNB1	Del_4p16.3	0.854	1
KCND2	Amp_8q24.21	0.854	1
KEL	7p-Amp	0.854	1
KRTAP5-10	Del_16q24.3	0.854	1
KYNU	Del_4p16.3	0.854	1
MAP2K1	MPP7	0.854	1
MAP2K1	Del_1p22.1	0.854	1
MSTN	Del_16q24.3	0.854	1
RELN	Del_9p23	0.854	1
ZNF780B	8q-Amp	0.854	1
BTK	1q-Amp	0.855	1
EPHA6	Amp_8q24.21	0.855	1
EPHA7	Del_10p15.3	0.855	1
FGFR2	16q-Del	0.855	1
IDH1	1q-Amp	0.855	1
KRTAP5-10	NRAS	0.855	1
MSTN	NRAS	0.855	1
NUP214	1q-Amp	0.855	1
RPTN	Amp_1p12	0.855	1
SELP	Del_15q13.3	0.855	1
SLC38A4	Amp_1p12	0.855	1
ANO4	GML	0.856	1
BRAF	Amp_4q12	0.856	1
CAMTA1	Del_10q21.1	0.856	1
CDK4	TTN	0.856	1
CDKN2A	Amp_5p15.33	0.856	1
FLT1	Amp_6p24.3	0.856	1
KEL	Amp_6p24.3	0.856	1
MYO3B	Del_9p21.3	0.856	1
NUDT11	TTN	0.856	1
RELN	9p-Del	0.856	1
TP53	13q-Amp	0.856	1
USP17L2	7q-Amp	0.856	1
XIRP2	Del_9p21.3	0.856	1
APC	CPA3	0.857	1
APC	DDX3X	0.857	1
CPA3	8p-Amp	0.857	1
CPA3	Del_5p15.31	0.857	1
CTNNA3	9p-Del	0.857	1
CYP3A4	PDGFRA	0.857	1
DDX3X	Del_5p15.31	0.857	1
EPHA7	1q-Amp	0.857	1
LGR6	Del_5p15.31	0.857	1
PTPN22	Amp_6q12	0.857	1
RELN	11p-Del	0.857	1
RIPK4	Amp_8q24.21	0.857	1
THSD7B	Amp_1p12	0.857	1
TPTE	Amp_1q44	0.857	1
16q-Del	Del_8p23.3	0.857	1
Amp_3p13	Del_16q23.1	0.857	1
Amp_6q12	Del_5p15.31	0.857	1
BTK	Del_10q26.3	0.858	1
CAMTA1	Del_6q26	0.858	1
CDK4	RELN	0.858	1
EPHA7	9p-Del	0.858	1
FLT1	9p-Del	0.858	1
MYO16	9p-Del	0.858	1
NUDT11	RELN	0.858	1
SLC38A4	Del_13q34	0.858	1
THSD7B	Del_1p22.1	0.858	1
THSD7B	Del_4p16.3	0.858	1
Amp_6p24.3	Del_13q34	0.858	1
ANO4	DDX3X	0.859	1
ANO4	Amp_6q12	0.859	1
C7orf58	Del_11q23.3	0.859	1
FRMPD4	Amp_12q14.1	0.859	1
FRMPD4	Del_16p13.3	0.859	1
HSD11B1	14q-Del	0.859	1
HSD11B1	Del_10p15.3	0.859	1
22q-Amp	14q-Del	0.859	1
Amp_15q26.2	Del_5q31.3	0.859	1
CAMTA1	Amp_11q13.3	0.86	1
CDC42BPA	Del_16q23.1	0.86	1
DDX3X	Del_11q23.3	0.86	1
FGFR2	11p-Del	0.86	1
KRT73	Del_16q23.1	0.86	1
NAP1L2	6p-Del	0.86	1
NAP1L2	Amp_11q13.3	0.86	1
PPP6C	7p-Amp	0.86	1
RIPK4	Del_16q23.1	0.86	1
SLC38A4	Del_16q24.3	0.86	1
SLC9A11	Amp_11q13.3	0.86	1
TP53	Del_2q37.3	0.86	1
USH2A	Amp_8q24.21	0.86	1
7p-Amp	Amp_6q12	0.86	1
ACSBG1	20q-Amp	0.861	1
ACSBG1	Amp_5p15.33	0.861	1
APCS	17p-Del	0.861	1
C10orf28	Del_9p21.3	0.861	1
CYP3A5	20q-Amp	0.861	1
CYP3A5	Amp_5p15.33	0.861	1
GUCY2F	10p-Del	0.861	1
IGF1R	17p-Del	0.861	1
PTPN11	Del_10q23.31	0.861	1
SYK	20q-Amp	0.861	1
SYK	Amp_5p15.33	0.861	1
USP17L2	Amp_8q24.21	0.861	1
ANO4	Del_1p36.31	0.862	1
ANO4	Del_4q34.3	0.862	1
APC	9q-Del	0.862	1
IDH1	5q-Del	0.862	1
MAN1A1	5q-Del	0.862	1
NBPF1	Del_11q23.3	0.862	1
NUP214	5q-Del	0.862	1
PDGFRA	8q-Amp	0.862	1
PDGFRA	Amp_1q21.3	0.862	1
USP17L2	Del_10p15.3	0.862	1
XIRP2	20q-Amp	0.862	1
ZFX	5q-Del	0.862	1
8p-Amp	Del_16q24.3	0.862	1
8q-Amp	Del_5p15.31	0.862	1
Amp_6p24.3	Del_19p13.3	0.862	1
ARID2	Del_10p15.3	0.863	1
ATP5F1	Amp_1q44	0.863	1
CTNNB1	MYO16	0.863	1
EPHA7	Amp_15q26.2	0.863	1
FLT1	8p-Amp	0.863	1
FRMPD4	Del_5q31.3	0.863	1
MAP2K1	SLC38A4	0.863	1
MYO16	Amp_15q26.2	0.863	1
MYO16	Del_9p21.3	0.863	1
C15orf23	Del_12q23.3	0.864	1
MYO16	Del_9p23	0.865	1
NF1	Del_9p23	0.865	1
NGF	Del_5q31.3	0.865	1
NUDT11	9p-Del	0.865	1
OR6C74	Del_5q31.3	0.865	1
OXA1L	9p-Del	0.865	1
PTPN11	9p-Del	0.865	1
RB1	Del_5q31.3	0.865	1
ALPK2	8q-Amp	0.866	1
BRAF	EPHA7	0.866	1
BTK	Del_9p23	0.866	1
COL3A1	16q-Del	0.866	1
MAN1A1	Del_9p23	0.866	1
NF1	NRAS	0.866	1
TP63	Amp_22q13.2	0.866	1
TTN	Del_15q13.3	0.866	1
USH2A	Del_10q21.1	0.866	1
ATP5F1	Amp_6p24.3	0.867	1
CCNA1	6p-Amp	0.867	1
CDKN2A	Amp_1q44	0.867	1
DMC1	Amp_6p24.3	0.867	1
EZH2	6p-Amp	0.867	1
FAM58A	Amp_6p24.3	0.867	1
FGFR2	5q-Del	0.867	1
GML	Amp_6p24.3	0.867	1
HSD11B1	Del_15q21.1	0.867	1
KRT73	6p-Amp	0.867	1
MAP2K1	7q-Amp	0.867	1
SLC9A11	Del_8p23.3	0.867	1
TP53	Del_14q23.3	0.867	1
TP63	Del_6q26	0.867	1
ALPK2	Amp_6q12	0.868	1
BRAF	CNTN5	0.868	1
C10orf28	Amp_7p22.1	0.868	1
C10orf54	TPTE	0.868	1
CDC42BPA	9q-Del	0.868	1
CNTN5	5q-Del	0.868	1
CPA3	18p-Del	0.868	1
CPA3	Amp_20q13.33	0.868	1
CYP3A4	20p-Amp	0.868	1
CYP3A4	18p-Del	0.868	1
CYP3A4	Amp_6p24.3	0.868	1
CYP3A4	Amp_20q13.33	0.868	1
DDX3X	POTEG	0.868	1
DDX3X	18p-Del	0.868	1
FGFR2	Amp_6q12	0.868	1
GLI1	Amp_1q21.3	0.868	1
IDH1	10p-Del	0.868	1
LGR6	20p-Amp	0.868	1
LGR6	18p-Del	0.868	1
LGR6	Amp_22q13.2	0.868	1
LGR6	Del_2q37.3	0.868	1
MYO16	Amp_5p15.33	0.868	1
NBPF1	Amp_6q12	0.868	1
RAC1	18p-Del	0.868	1
RAC1	Del_2q37.3	0.868	1
RIPK4	9q-Del	0.868	1
S100A8	7p-Amp	0.868	1
ZFX	10p-Del	0.868	1
18p-Del	Amp_6q12	0.868	1
Amp_8q24.21	Del_2q37.3	0.868	1
Amp_22q13.2	Del_16q23.1	0.868	1
ACSBG1	Del_11q23.3	0.869	1
ARID2	Del_9p21.3	0.869	1
CNTN5	Amp_3p13	0.869	1
DMC1	TP53	0.869	1
GML	TP53	0.869	1
MLL	Del_16q12.1	0.869	1
NAP1L2	Del_8p23.3	0.869	1
NF1	PTEN	0.869	1
NF1	22q-Amp	0.869	1
PDGFRA	7p-Amp	0.869	1
RELN	Amp_4q12	0.869	1
RPTN	20q-Amp	0.869	1
RPTN	Amp_5p15.33	0.869	1
THSD7B	Del_4q34.3	0.869	1
TPTE	8p-Amp	0.869	1
USP17L2	Del_16q23.1	0.869	1
20q-Amp	Del_14q23.3	0.869	1
CBL	7q-Amp	0.87	1
FLT1	IDH1	0.87	1
IDH1	Del_1p36.31	0.87	1
IDH1	Del_4q34.3	0.87	1
IDH1	Del_10q23.31	0.87	1
MAN1A1	Del_10q23.31	0.87	1
MLL	Del_10q21.1	0.87	1
NUP214	Del_1p36.31	0.87	1
XIRP2	20p-Amp	0.87	1
Amp_4q12	Del_1p36.31	0.87	1
APC	Amp_11q13.3	0.871	1
EPHA4	Del_5p15.31	0.871	1
EPHA6	Del_6q21	0.871	1
HSD11B1	Del_10q21.1	0.871	1
OR4S2	Amp_17q25.3	0.871	1
OR4S2	Del_1p22.1	0.871	1
PDGFRA	6p-Del	0.871	1
USP9X	Amp_17q25.3	0.871	1
8p-Amp	6p-Del	0.871	1
KYNU	16q-Del	0.872	1
MLL	10q-Del	0.872	1
NRAS	Del_16q12.1	0.872	1
OR6C74	10q-Del	0.872	1
RELN	Del_2q37.3	0.872	1
USH2A	Del_16p13.3	0.872	1
CDC42BPA	Del_10q26.3	0.873	1
CTNNA3	Del_1p22.1	0.873	1
KIT	Del_10q26.3	0.873	1
MPP7	Amp_3p13	0.873	1
NAP1L2	Amp_13q31.3	0.873	1
PARM1	8q-Amp	0.873	1
THSD7B	Del_5q31.3	0.873	1
USP17L2	1q-Amp	0.873	1
USP17L2	22q-Amp	0.873	1
22q-Amp	Amp_13q31.3	0.873	1
ARID2	Del_5p15.31	0.874	1
CDC42BPA	Amp_7q34	0.874	1
CDK4	Del_6q21	0.874	1
EPHA7	Del_10q21.1	0.874	1
FGFR2	Del_6q21	0.874	1
HSD11B1	Del_15q13.3	0.874	1
KRT73	Amp_7q34	0.874	1
KYNU	11q-Del	0.874	1
LGR6	10q-Del	0.874	1
MLL	Del_3q13.31	0.874	1
MYO3B	Amp_1q44	0.874	1
NUDT11	Del_6q21	0.874	1
S100A8	Del_6q21	0.874	1
STK19	Amp_1p12	0.874	1
XIRP2	Amp_20q13.33	0.874	1
Amp_5p15.33	Del_19p13.3	0.874	1
Amp_22q13.2	Del_1p36.31	0.874	1
ACSBG1	Del_14q23.3	0.875	1
COL3A1	RQCD1	0.875	1
EPHA6	Amp_12q14.1	0.875	1
EPHA6	Del_6q26	0.875	1
EPHA6	Del_16p13.3	0.875	1
NGF	11q-Del	0.875	1
SLC27A5	Del_10q21.1	0.875	1
BRAF	HRAS	0.876	1
CNTN5	Amp_8q24.21	0.876	1
DDX3X	11p-Del	0.876	1
DSG3	Amp_6q12	0.876	1
EPHA6	Del_4p16.3	0.876	1
LGR6	11p-Del	0.876	1
MLL	Del_10q23.31	0.876	1
NRAS	18p-Del	0.876	1
USP17L2	9q-Del	0.876	1
ZFX	9p-Del	0.876	1
9q-Del	Amp_13q31.3	0.876	1
RPTN	Amp_17q25.3	0.877	1
RPTN	Del_4p16.3	0.877	1
6q-Del	Del_2q37.3	0.877	1
Amp_17q25.3	Del_14q23.3	0.877	1
Amp_17q25.3	Del_16q12.1	0.877	1
ATP5F1	10p-Del	0.878	1
C7orf58	Amp_6p24.3	0.878	1
CCK	10p-Del	0.878	1
DDX3X	Del_12q23.3	0.878	1
FGFR2	Del_4q34.3	0.878	1
FLT1	18p-Del	0.878	1
GNAQ	10p-Del	0.878	1
IDH1	14q-Del	0.878	1
IDH1	Del_5q12.1	0.878	1
KEL	Del_2q37.3	0.878	1
LGR6	Del_13q34	0.878	1
MAN1A1	14q-Del	0.878	1
MAN1A1	Del_5q12.1	0.878	1
MLL	Amp_1q21.3	0.878	1
POTEG	10q-Del	0.878	1
PPP6C	Del_13q34	0.878	1
RAC1	Del_12q23.3	0.878	1
RAC1	Del_13q34	0.878	1
SLC38A4	Amp_7p22.1	0.878	1
SLC9A11	Amp_13q31.3	0.878	1
14q-Del	Amp_4q12	0.878	1
9q-Del	Amp_5p15.33	0.878	1
Amp_6p24.3	Del_5q12.1	0.878	1
BRAF	Del_16q12.1	0.879	1
KEL	Del_5q31.3	0.879	1
NAP1L2	Del_15q13.3	0.879	1
PTEN	Amp_1p12	0.879	1
22q-Amp	Del_15q13.3	0.879	1
APCS	10q-Del	0.88	1
BRAF	FRMPD4	0.88	1
C10orf28	6q-Del	0.88	1
COL3A1	Del_10q26.3	0.88	1
DMC1	TP63	0.88	1
DMC1	8q-Amp	0.88	1
GML	8q-Amp	0.88	1
KYNU	1q-Amp	0.88	1
MAP2K1	1q-Amp	0.88	1
MAP2K1	5q-Del	0.88	1
NBPF1	Del_16q24.3	0.88	1
NRAS	NUP214	0.88	1
OR6C74	1q-Amp	0.88	1
SLC38A4	USP9X	0.88	1
SYK	10q-Del	0.88	1
TPTE	Del_1p22.1	0.88	1
USH2A	Del_10q26.3	0.88	1
DCLK3	6p-Del	0.881	1
DSG3	Del_5q31.3	0.881	1
DSG3	Del_16q23.1	0.881	1
EPHA4	20p-Amp	0.881	1
EPHA4	18p-Del	0.881	1
FGFR2	Amp_11q13.3	0.881	1
MLL	1q-Amp	0.881	1
NBPF1	Amp_11q13.3	0.881	1
OR4S2	Del_6q26	0.881	1
STK19	20q-Amp	0.881	1
6p-Amp	Amp_1p12	0.881	1
ALPK2	6p-Amp	0.882	1
BRAF	Del_9p23	0.882	1
C15orf23	Del_10q26.3	0.882	1
GML	10p-Del	0.882	1
GUCY2F	Del_10q26.3	0.882	1
IDH1	7p-Amp	0.882	1
MLL	16q-Del	0.882	1
STK19	Del_6q26	0.882	1
TPTE	Amp_4q12	0.882	1
ZFX	7p-Amp	0.882	1
APC	Amp_13q31.3	0.883	1
CAMTA1	Del_10q23.31	0.883	1
COL3A1	5q-Del	0.883	1
PTPN22	Amp_13q31.3	0.883	1
TPTE	6p-Del	0.883	1
TRERF1	Amp_13q31.3	0.883	1
XIRP2	Del_6q26	0.883	1
Amp_8q24.21	Amp_12q14.1	0.883	1
C10orf28	9q-Del	0.884	1
FLT1	Del_15q21.1	0.884	1
KCND2	6p-Amp	0.884	1
MYO16	Amp_3p13	0.884	1
TTN	5q-Del	0.884	1
ARID2	14q-Del	0.885	1
ARID2	Amp_8q24.21	0.885	1
ARID2	Del_5q12.1	0.885	1
ATP5F1	NRAS	0.885	1
CCNA1	Amp_22q13.2	0.885	1
CDC42BPA	Amp_22q13.2	0.885	1
FLT1	Amp_1q21.3	0.885	1
GNAQ	NRAS	0.885	1
IDH1	NF1	0.885	1
KCND2	Del_1p22.1	0.885	1
KEL	11p-Del	0.885	1
KEL	9q-Del	0.885	1
KIT	Amp_22q13.2	0.885	1
KRT73	Amp_20q13.33	0.885	1
NBPF1	9q-Del	0.885	1
NUP214	Del_8p23.3	0.885	1
RIPK4	Amp_22q13.2	0.885	1
TRERF1	Del_9p23	0.885	1
9p-Del	Amp_5p15.33	0.885	1
Amp_4q12	Del_8p23.3	0.885	1
ALPK2	6p-Del	0.886	1
ALPK2	Amp_11q13.3	0.886	1
DMC1	Del_6q26	0.886	1
EPHA4	Amp_20q13.33	0.886	1
MPP7	Amp_12q14.1	0.886	1
6p-Del	Amp_22q13.2	0.886	1
Amp_17q25.3	Del_16p13.3	0.886	1
ACSBG1	Amp_8q24.21	0.887	1
EPHA4	Amp_1q44	0.887	1
FLT1	Amp_15q26.2	0.887	1
KEL	Amp_15q26.2	0.887	1
KYNU	Del_1p36.31	0.887	1
MAN1A1	Del_6q21	0.887	1
MAP2K1	Del_1p36.31	0.887	1
MAP2K1	Del_4q34.3	0.887	1
NAP1L2	Amp_6p24.3	0.887	1
ACSBG1	6p-Amp	0.888	1
BRAF	Del_2q37.3	0.888	1
C15orf23	Del_10p15.3	0.888	1
C7orf58	Amp_20q13.33	0.888	1
CDC42BPA	9p-Del	0.888	1
DCLK3	14q-Del	0.888	1
EMG1	Amp_7q34	0.888	1
GUCY2F	Del_10p15.3	0.888	1
KIT	9p-Del	0.888	1
MLL	10p-Del	0.888	1
NBPF1	14q-Del	0.888	1
SYK	6p-Amp	0.888	1
BRAF	Del_15q21.1	0.889	1
CBL	RELN	0.889	1
DCLK3	7p-Amp	0.889	1
FGFR2	7p-Amp	0.889	1
NAP1L2	20q-Amp	0.889	1
NAP1L2	17p-Del	0.889	1
NRAS	Amp_7p22.1	0.889	1
PTEN	Amp_5p15.33	0.889	1
TTN	6q-Del	0.889	1
USH2A	Amp_3p13	0.889	1
ANO4	Del_15q21.1	0.89	1
EPHA6	8p-Amp	0.89	1
MYO16	Del_16q12.1	0.89	1
NRAS	Del_10q23.31	0.89	1
SLC38A4	Del_16q12.1	0.89	1
THSD7B	6p-Amp	0.89	1
THSD7B	8p-Amp	0.89	1
TPTE	Del_8p23.3	0.89	1
7q-Amp	Amp_3p13	0.89	1
BRAF	GML	0.891	1
CCNA1	11p-Del	0.891	1
CDC42BPA	11p-Del	0.891	1
GLI1	11p-Del	0.891	1
KIT	TP53	0.891	1
LGR6	Del_16q24.3	0.891	1
MSTN	Del_9p23	0.891	1
PPP6C	8q-Amp	0.891	1
TP63	6q-Del	0.891	1
TTN	Del_6q21	0.891	1
ZFX	Del_10p15.3	0.891	1
Amp_6q12	Del_16q24.3	0.891	1
ATP5F1	Del_10p15.3	0.892	1
BTK	Del_15q13.3	0.892	1
CCK	Del_10p15.3	0.892	1
DCLK3	Del_10p15.3	0.892	1
EPHA4	Del_9p23	0.892	1
GNAQ	Del_10p15.3	0.892	1
IDH1	Del_15q13.3	0.892	1
KRTAP5-10	Del_5q31.3	0.892	1
MAN1A1	Amp_1p12	0.892	1
NBPF1	Del_10p15.3	0.892	1
NRAS	Del_16q23.1	0.892	1
RPTN	Del_3q13.31	0.892	1
RPTN	Del_19p13.3	0.892	1
THSD7B	14q-Del	0.892	1
ZFX	Amp_1p12	0.892	1
BRAF	GNAQ	0.893	1
BRAF	KRAS	0.893	1
DCLK3	Amp_7q34	0.893	1
DDX3X	Del_9p21.3	0.893	1
DSG3	Amp_11q13.3	0.893	1
FGFR2	Amp_13q31.3	0.893	1
MYO3B	Amp_7p22.1	0.893	1
PDGFRA	Amp_1p12	0.893	1
POTEG	Amp_13q31.3	0.893	1
PPP6C	Del_9p21.3	0.893	1
PTPN22	Amp_1p12	0.893	1
THSD7B	6q-Del	0.893	1
TP53	6p-Del	0.893	1
USP17L2	18p-Del	0.893	1
USP17L2	Del_2q37.3	0.893	1
C15orf23	Del_10q23.31	0.894	1
C7orf58	CTNNB1	0.894	1
CCNA1	Amp_1q44	0.894	1
CNTN5	8p-Amp	0.894	1
CNTN5	Del_5p15.31	0.894	1
CTNNB1	Del_5q12.1	0.894	1
EPHA7	Amp_12q14.1	0.894	1
GUCY2F	Del_10q23.31	0.894	1
KYNU	14q-Del	0.894	1
MLL	5q-Del	0.894	1
PARM1	Del_10q23.31	0.894	1
SELP	Amp_12q14.1	0.894	1
SLC9A11	20q-Amp	0.894	1
TP53	6p-Amp	0.894	1
USP17L2	9p-Del	0.894	1
6p-Del	Amp_6p24.3	0.894	1
Amp_1q21.3	Del_1p22.1	0.894	1
Amp_15q26.2	Del_5q12.1	0.894	1
CTNNA3	16q-Del	0.895	1
XIRP2	11p-Del	0.895	1
16q-Del	Amp_3p13	0.895	1
Amp_1q21.3	Del_16p13.3	0.895	1
Amp_1q44	Amp_3p13	0.895	1
CDKN2A	1q-Amp	0.896	1
CDKN2A	9q-Del	0.896	1
CTNNA3	Amp_6q12	0.896	1
MAP2K1	Del_9p21.3	0.896	1
NAP1L2	Del_19p13.3	0.896	1
PTEN	Del_3q13.31	0.896	1
RAC1	Amp_3p13	0.896	1
XIRP2	Del_13q34	0.896	1
22q-Amp	Del_3q13.31	0.896	1
22q-Amp	Del_19p13.3	0.896	1
ANO4	Amp_6p24.3	0.897	1
CDK4	Del_6q26	0.897	1
EPHA6	Amp_5p15.33	0.897	1
FGFR2	Del_8p23.3	0.897	1
NBPF1	Del_8p23.3	0.897	1
NF1	20p-Amp	0.897	1
NF1	18p-Del	0.897	1
NUDT11	Del_6q26	0.897	1
OR6C74	Del_10q26.3	0.897	1
S100A8	Del_6q26	0.897	1
ALPK2	Amp_3p13	0.898	1
ARID2	11p-Del	0.898	1
ATP5F1	Del_10q21.1	0.898	1
BTK	Amp_5p15.33	0.898	1
CCK	Del_10q21.1	0.898	1
FAM58A	Del_10q21.1	0.898	1
IDH1	20q-Amp	0.898	1
IDH1	Amp_5p15.33	0.898	1
KRAS	Del_10q21.1	0.898	1
MAN1A1	20q-Amp	0.898	1
MLL	Amp_4q12	0.898	1
MLL	Amp_12q15	0.898	1
NUP214	17p-Del	0.898	1
OR6C74	7p-Amp	0.898	1
TP53	14q-Del	0.898	1
USH2A	Del_6q26	0.898	1
ZFX	20q-Amp	0.898	1
ZFX	17p-Del	0.898	1
ZFX	Amp_5p15.33	0.898	1
17p-Del	Amp_4q12	0.898	1
17p-Del	Amp_12q15	0.898	1
ALPK2	BRAF	0.899	1
CTNNA3	11q-Del	0.899	1
EZH2	Amp_6p24.3	0.899	1
RIPK4	Amp_6p24.3	0.899	1
STK19	Del_9p21.3	0.899	1
XIRP2	Amp_7q34	0.899	1
BRAF	16q-Del	0.9	1
C15orf23	Del_10q21.1	0.9	1
HSD11B1	Del_16q23.1	0.9	1
PARM1	Amp_17q25.3	0.9	1
PARM1	Del_1p22.1	0.9	1
13q-Amp	Amp_17q25.3	0.9	1
13q-Amp	Del_4p16.3	0.9	1
ALPK2	Del_8p23.3	0.901	1
C10orf54	Amp_7p22.1	0.901	1
CNTN5	Del_14q23.3	0.901	1
KRAS	THSD7B	0.901	1
KRTAP5-10	11q-Del	0.901	1
LGR6	NRAS	0.901	1
MAN1A1	Del_10q21.1	0.901	1
MAP2K1	Del_8p23.3	0.901	1
MAP2K1	Del_15q21.1	0.901	1
NF1	Amp_20q13.33	0.901	1
S100A8	Amp_7p22.1	0.901	1
SLC9A11	7p-Amp	0.901	1
TRERF1	Amp_1q44	0.901	1
USP9X	1q-Amp	0.901	1
XIRP2	Del_10q26.3	0.901	1
ZFX	Del_10q21.1	0.901	1
ACSBG1	Amp_7q34	0.902	1
ALPK2	Amp_8q24.21	0.902	1
APC	20q-Amp	0.902	1
CCNA1	8q-Amp	0.902	1
CDC42BPA	Del_16q24.3	0.902	1
HSD11B1	Del_11q23.3	0.902	1
KIT	Del_16q24.3	0.902	1
KRT73	8q-Amp	0.902	1
NF1	Amp_8q24.21	0.902	1
RIPK4	8q-Amp	0.902	1
RIPK4	Del_16q24.3	0.902	1
USP17L2	7p-Amp	0.902	1
USP9X	Del_1p36.31	0.902	1
Del_9p23	Del_Xp21.1	0.902	1
CAMTA1	Del_6q21	0.903	1
COL3A1	Del_3q13.31	0.903	1
COL3A1	Del_19p13.3	0.903	1
EPHA6	Amp_22q13.2	0.903	1
MLL	Del_6q21	0.903	1
MYO3B	Del_4q34.3	0.903	1
NRAS	Del_1p36.31	0.903	1
14q-Del	Amp_1q21.3	0.903	1
CDC42BPA	Del_9p21.3	0.904	1
CDKN2A	Amp_4q12	0.904	1
MAP2K1	TPTE	0.904	1
OR6C74	Del_10q23.31	0.904	1
RB1	Del_10q23.31	0.904	1
ACSBG1	Amp_20q13.33	0.905	1
C10orf28	Amp_6p24.3	0.905	1
C15orf23	Amp_8q24.21	0.905	1
CAMTA1	PTEN	0.905	1
CNTN5	Del_1p22.1	0.905	1
CTNNA3	5q-Del	0.905	1
EPHA6	20p-Amp	0.905	1
IGF1R	Amp_20q13.33	0.905	1
NAP1L2	PTEN	0.905	1
NAP1L2	22q-Amp	0.905	1
TRERF1	Del_3q13.31	0.905	1
TRERF1	Del_19p13.3	0.905	1
ALPK2	Del_9p23	0.906	1
DCLK3	Amp_1p12	0.906	1
EPHA7	Del_1p22.1	0.906	1
FLT1	17p-Del	0.906	1
MYO16	Del_4p16.3	0.906	1
NAP1L2	Del_16q12.1	0.906	1
NBPF1	Del_10q21.1	0.906	1
RPTN	22q-Amp	0.906	1
THSD7B	Amp_4q12	0.906	1
THSD7B	Amp_12q15	0.906	1
TPTE	Del_13q34	0.906	1
USP17L2	Del_6q21	0.906	1
XIRP2	Del_14q23.3	0.906	1
XIRP2	Del_16q12.1	0.906	1
ZNF780B	1q-Amp	0.906	1
22q-Amp	Del_16q12.1	0.906	1
Amp_20q13.33	Del_9p23	0.906	1
CAMTA1	10p-Del	0.907	1
CTNNA3	1q-Amp	0.907	1
CTNNB1	Amp_1p12	0.907	1
KEL	Del_10q26.3	0.907	1
MAP2K1	Amp_1p12	0.907	1
MAP2K1	Del_15q13.3	0.907	1
TPTE	1q-Amp	0.907	1
1q-Amp	Amp_3p13	0.907	1
1q-Amp	Del_1p36.31	0.907	1
8q-Amp	Del_5q31.3	0.907	1
ALPK2	9p-Del	0.908	1
COL3A1	9q-Del	0.908	1
EPHA4	Amp_3p13	0.908	1
MAP2K1	9p-Del	0.908	1
NGF	9p-Del	0.908	1
OXA1L	Amp_8q24.21	0.908	1
S100A8	Amp_8q24.21	0.908	1
SYK	Del_10q26.3	0.908	1
THSD7B	Amp_1q21.3	0.908	1
6p-Amp	Del_19p13.3	0.908	1
5q-Del	Amp_12q14.1	0.908	1
GML	Del_10q21.1	0.909	1
TTN	Del_10q21.1	0.909	1
USH2A	Del_10q23.31	0.909	1
USP9X	14q-Del	0.909	1
ZNF780B	10q-Del	0.909	1
Del_13q34	Del_15q21.1	0.909	1
ACSBG1	11p-Del	0.91	1
CBL	CNTN5	0.91	1
DSG3	Del_8p23.3	0.91	1
EPHA7	Del_10q26.3	0.91	1
LGR6	Del_10q26.3	0.91	1
MAN1A1	Del_14q23.3	0.91	1
MYO16	Del_10q26.3	0.91	1
NUP214	Del_16q12.1	0.91	1
PPP6C	Del_10q26.3	0.91	1
RPTN	1q-Amp	0.91	1
RPTN	Amp_4q12	0.91	1
RPTN	Amp_12q15	0.91	1
TP53	Del_8p23.3	0.91	1
TP53	Del_15q21.1	0.91	1
1q-Amp	Del_19p13.3	0.91	1
Amp_4q12	Del_14q23.3	0.91	1
Amp_6q12	Del_10q26.3	0.91	1
CPA3	Del_4p16.3	0.911	1
CYP3A4	Amp_17q25.3	0.911	1
CYP3A4	Del_1p22.1	0.911	1
DDX3X	Amp_17q25.3	0.911	1
DDX3X	Del_4p16.3	0.911	1
EPHA7	9q-Del	0.911	1
GUCY2F	6q-Del	0.911	1
HSD11B1	10q-Del	0.911	1
LGR6	Amp_17q25.3	0.911	1
LGR6	Del_4p16.3	0.911	1
MYO16	9q-Del	0.911	1
RAC1	Amp_17q25.3	0.911	1
RAC1	Del_1p22.1	0.911	1
RELN	Del_5q31.3	0.911	1
CCNA1	10p-Del	0.912	1
CDK4	6q-Del	0.912	1
CYP3A4	Del_10p15.3	0.912	1
EZH2	10p-Del	0.912	1
FRMPD4	9p-Del	0.912	1
MPP7	Del_5q31.3	0.912	1
MYO3B	14q-Del	0.912	1
OXA1L	6q-Del	0.912	1
S100A8	6q-Del	0.912	1
STK19	Amp_8q24.21	0.912	1
THSD7B	20p-Amp	0.912	1
XIRP2	Amp_1p12	0.912	1
XIRP2	Amp_12q14.1	0.912	1
XIRP2	Del_16p13.3	0.912	1
ZNF780B	Del_9p21.3	0.912	1
10p-Del	Amp_11q13.3	0.912	1
Amp_17q25.3	Del_5q31.3	0.912	1
COL3A1	Del_16q23.1	0.913	1
CTNNB1	MLL	0.913	1
CTNNB1	Amp_5p15.33	0.913	1
MAP2K1	MLL	0.913	1
MAP2K1	17p-Del	0.913	1
MAP2K1	Amp_5p15.33	0.913	1
NAP1L2	Del_16q23.1	0.913	1
USH2A	Del_9p21.3	0.913	1
22q-Amp	Del_16q23.1	0.913	1
APC	PTEN	0.914	1
BRAF	CBL	0.914	1
COL3A1	Amp_12q14.1	0.914	1
COL3A1	Del_16p13.3	0.914	1
DCLK3	Del_3q13.31	0.914	1
DCLK3	Del_19p13.3	0.914	1
DMC1	Del_5q31.3	0.914	1
FGFR2	Amp_5p15.33	0.914	1
FGFR2	Del_19p13.3	0.914	1
LGR6	Amp_7p22.1	0.914	1
MLL	18p-Del	0.914	1
PDGFRA	PTEN	0.914	1
PDGFRA	22q-Amp	0.914	1
TP53	1q-Amp	0.914	1
USP17L2	Del_11q23.3	0.914	1
22q-Amp	Del_5p15.31	0.914	1
Amp_6q12	Amp_7p22.1	0.914	1
ANO4	Del_1p22.1	0.915	1
CDK4	9q-Del	0.915	1
FAM58A	Del_11q23.3	0.915	1
FGFR2	Del_6q26	0.915	1
FLT1	Amp_12q14.1	0.915	1
FLT1	Del_16p13.3	0.915	1
KCND2	6p-Del	0.915	1
KCND2	Amp_11q13.3	0.915	1
KEL	Amp_12q14.1	0.915	1
KRAS	Del_11q23.3	0.915	1
MAN1A1	Del_6q26	0.915	1
NUDT11	Amp_1q21.3	0.915	1
PTPN11	9q-Del	0.915	1
RQCD1	Del_6q21	0.915	1
S100A8	9q-Del	0.915	1
TRERF1	9p-Del	0.915	1
USP17L2	Amp_6p24.3	0.915	1
HSD11B1	6q-Del	0.916	1
MLL	Del_5q12.1	0.916	1
RPTN	6p-Amp	0.916	1
SYK	Del_10q23.31	0.916	1
XIRP2	11q-Del	0.916	1
ZFX	Del_16q23.1	0.916	1
6p-Amp	Del_14q23.3	0.916	1
ARID2	8q-Amp	0.917	1
THSD7B	Del_14q23.3	0.917	1
8q-Amp	Del_5q12.1	0.917	1
Amp_15q26.2	Del_6q21	0.917	1
APC	Del_14q23.3	0.918	1
EPHA7	Amp_6q12	0.918	1
PTEN	11q-Del	0.918	1
PTPN22	Del_16q12.1	0.918	1
RPTN	Del_5p15.31	0.918	1
SELP	Amp_6q12	0.918	1
TTN	Amp_12q14.1	0.918	1
USP17L2	Amp_3p13	0.918	1
22q-Amp	11q-Del	0.918	1
ACSBG1	8q-Amp	0.919	1
ACSBG1	Amp_1q44	0.919	1
CDC42BPA	NRAS	0.919	1
EZH2	NRAS	0.919	1
KCND2	11p-Del	0.919	1
KIT	NRAS	0.919	1
NRAS	PTEN	0.919	1
NRAS	SLC38A4	0.919	1
NRAS	22q-Amp	0.919	1
PDGFRA	Del_5q31.3	0.919	1
SYK	Amp_1q44	0.919	1
XIRP2	Amp_7p22.1	0.919	1
8p-Amp	Del_5q31.3	0.919	1
MYO3B	Del_8p23.3	0.92	1
PTEN	SLC9A11	0.92	1
RELN	Amp_22q13.2	0.92	1
SLC38A4	Del_11q23.3	0.92	1
SLC9A11	Amp_1q44	0.92	1
STK19	Amp_1q21.3	0.92	1
TTN	20p-Amp	0.92	1
TTN	Del_2q37.3	0.92	1
13q-Amp	5q-Del	0.92	1
ATP5F1	10q-Del	0.921	1
C7orf58	Amp_12q14.1	0.921	1
CCK	10q-Del	0.921	1
CDKN2A	Del_2q37.3	0.921	1
FAM58A	10q-Del	0.921	1
KRAS	10q-Del	0.921	1
MAN1A1	6p-Amp	0.921	1
SLC27A5	7p-Amp	0.921	1
USP17L2	Del_16q24.3	0.921	1
USP9X	Del_10q26.3	0.921	1
ZNF780B	7p-Amp	0.921	1
6p-Amp	Amp_12q15	0.921	1
ALPK2	Del_1p22.1	0.922	1
ANO4	Del_3q13.31	0.922	1
ARID2	Amp_3p13	0.922	1
DMC1	11q-Del	0.922	1
FGFR2	22q-Amp	0.922	1
MLL	Del_11q23.3	0.922	1
MPP7	6p-Del	0.922	1
MPP7	Amp_11q13.3	0.922	1
NUDT11	Del_9p21.3	0.922	1
OR4S2	7p-Amp	0.922	1
S100A8	Del_9p21.3	0.922	1
THSD7B	5q-Del	0.922	1
THSD7B	Amp_7q34	0.922	1
TP63	Amp_3p13	0.922	1
USP9X	7p-Amp	0.922	1
Amp_6q12	Del_10q21.1	0.922	1
Amp_22q13.2	Del_1p22.1	0.922	1
ACSBG1	Amp_6p24.3	0.923	1
ALPK2	Amp_5p15.33	0.923	1
IDH1	Amp_7p22.1	0.923	1
MLL	Amp_20q13.33	0.923	1
MYO16	Del_10q23.31	0.923	1
NAP1L2	Amp_8q24.21	0.923	1
PDGFRA	Del_5p15.31	0.923	1
PTPN22	Del_5p15.31	0.923	1
THSD7B	Del_10q23.31	0.923	1
TRERF1	Del_5p15.31	0.923	1
XIRP2	Del_16q23.1	0.923	1
ALPK2	Del_6q21	0.924	1
KEL	Del_14q23.3	0.924	1
KYNU	Del_14q23.3	0.924	1
PARM1	7q-Amp	0.924	1
PTPN22	Del_16q23.1	0.924	1
Amp_15q26.2	Del_14q23.3	0.924	1
BRAF	8p-Amp	0.925	1
COL3A1	6p-Amp	0.925	1
CYP3A4	9p-Del	0.925	1
DSG3	6q-Del	0.925	1
FGFR2	Amp_6p24.3	0.925	1
LGR6	16q-Del	0.925	1
LGR6	9p-Del	0.925	1
MAP2K1	USH2A	0.925	1
MLL	Del_12q23.3	0.925	1
MLL	Del_13q34	0.925	1
MYO16	16q-Del	0.925	1
NF1	20q-Amp	0.925	1
NF1	Amp_5p15.33	0.925	1
SLC38A4	Del_5q31.3	0.925	1
USH2A	Del_16q23.1	0.925	1
16q-Del	Amp_6q12	0.925	1
C15orf23	Del_1p36.31	0.926	1
FLT1	13q-Amp	0.926	1
FLT1	10q-Del	0.926	1
GUCY2F	Del_4q34.3	0.926	1
KEL	10q-Del	0.926	1
PARM1	Del_1p36.31	0.926	1
PARM1	Del_4q34.3	0.926	1
PDGFRA	Del_6q21	0.926	1
PTPN22	10p-Del	0.926	1
RB1	Amp_7p22.1	0.926	1
USH2A	10p-Del	0.926	1
USP9X	17p-Del	0.926	1
13q-Amp	Del_4q34.3	0.926	1
11p-Del	Amp_22q13.2	0.926	1
BTK	Del_11q23.3	0.927	1
CCNA1	Del_10p15.3	0.927	1
CDC42BPA	Del_10p15.3	0.927	1
EZH2	Del_10p15.3	0.927	1
FLT1	Amp_7p22.1	0.927	1
FRMPD4	Amp_1p12	0.927	1
FRMPD4	Del_9p21.3	0.927	1
KEL	Amp_7p22.1	0.927	1
MAN1A1	Del_11q23.3	0.927	1
MPP7	Del_10q21.1	0.927	1
MYO3B	Del_15q13.3	0.927	1
NF1	8q-Amp	0.927	1
NF1	Amp_12q14.1	0.927	1
NF1	Del_16p13.3	0.927	1
NUP214	Del_11q23.3	0.927	1
SLC9A11	Amp_6p24.3	0.927	1
THSD7B	Del_15q13.3	0.927	1
TP63	Del_8p23.3	0.927	1
DMC1	Del_9p23	0.928	1
FGFR2	Del_16q12.1	0.928	1
NBPF1	Del_16q12.1	0.928	1
SELP	6p-Del	0.928	1
SELP	Amp_11q13.3	0.928	1
SLC38A4	Amp_11q13.3	0.928	1
XIRP2	Del_10q23.31	0.928	1
XIRP2	Del_16q24.3	0.928	1
C15orf23	11q-Del	0.929	1
CNTN5	Del_15q13.3	0.929	1
FRMPD4	Del_3q13.31	0.929	1
MYO3B	Del_3q13.31	0.929	1
NF1	Amp_3p13	0.929	1
THSD7B	Amp_1q44	0.929	1
Amp_1q44	Del_4p16.3	0.929	1
Amp_3p13	Del_8p23.3	0.929	1
ANO4	IDH1	0.93	1
ANO4	Amp_12q15	0.93	1
CDK4	Amp_1q44	0.93	1
DCLK3	8p-Amp	0.93	1
DCLK3	Del_5p15.31	0.93	1
DSG3	Del_4p16.3	0.93	1
EPHA4	Amp_7p22.1	0.93	1
NBPF1	Del_5p15.31	0.93	1
NBPF1	Del_10q23.31	0.93	1
NUDT11	Amp_1q44	0.93	1
PTEN	Del_13q34	0.93	1
PTPN22	20p-Amp	0.93	1
PTPN22	18p-Del	0.93	1
RELN	Del_9p21.3	0.93	1
STK19	Del_9p23	0.93	1
THSD7B	Del_13q34	0.93	1
USP17L2	10p-Del	0.93	1
8p-Amp	Del_2q37.3	0.93	1
6q-Del	Amp_3p13	0.93	1
Amp_7p22.1	Amp_11q13.3	0.93	1
APC	11q-Del	0.931	1
BRAF	MYO16	0.931	1
COL3A1	Del_5p15.31	0.931	1
DDX3X	5q-Del	0.931	1
IDH1	Amp_8q24.21	0.931	1
KCND2	14q-Del	0.931	1
PTPN22	11q-Del	0.931	1
RAC1	5q-Del	0.931	1
S100A8	Del_9p23	0.931	1
SLC9A11	8p-Amp	0.931	1
TRERF1	6p-Amp	0.931	1
XIRP2	Amp_4q12	0.931	1
5q-Del	Amp_6q12	0.931	1
Amp_8q24.21	Amp_12q15	0.931	1
EPHA7	10q-Del	0.932	1
GLI1	Del_5q31.3	0.932	1
GUCY2F	14q-Del	0.932	1
KEL	Amp_17q25.3	0.932	1
MYO16	10q-Del	0.932	1
TP53	Amp_1q21.3	0.932	1
13q-Amp	Del_5q12.1	0.932	1
20p-Amp	Del_5q31.3	0.932	1
Amp_11q13.3	Del_10q26.3	0.932	1
Amp_17q25.3	Del_4q34.3	0.932	1
ANO4	Del_14q23.3	0.933	1
ARID2	Del_14q23.3	0.933	1
CDKN2A	Del_15q21.1	0.933	1
LGR6	Del_5q31.3	0.933	1
NUDT11	Amp_6p24.3	0.933	1
PTPN11	Amp_6p24.3	0.933	1
RAC1	9q-Del	0.933	1
SLC38A4	Amp_20q13.33	0.933	1
TP53	Del_19p13.3	0.933	1
1q-Amp	Del_1p22.1	0.933	1
9q-Del	Amp_6q12	0.933	1
Amp_6q12	Del_5q31.3	0.933	1
ACSBG1	10p-Del	0.934	1
ALPK2	Amp_4q12	0.934	1
APCS	10p-Del	0.934	1
BTK	Amp_20q13.33	0.934	1
CTNNA3	7p-Amp	0.934	1
EPHA6	8q-Amp	0.934	1
FRMPD4	Amp_5p15.33	0.934	1
GUCY2F	1q-Amp	0.934	1
HSD11B1	8q-Amp	0.934	1
IDH1	Amp_20q13.33	0.934	1
NRAS	Amp_3p13	0.934	1
NRAS	Del_15q21.1	0.934	1
STK19	8q-Amp	0.934	1
USP9X	Del_9p23	0.934	1
USP9X	Del_9p21.3	0.934	1
ZFX	Amp_20q13.33	0.934	1
CCK	Del_10q26.3	0.935	1
FAM58A	Del_10q26.3	0.935	1
KIT	7q-Amp	0.935	1
KRAS	Del_10q26.3	0.935	1
NGF	6q-Del	0.935	1
NUP214	10q-Del	0.935	1
OR6C74	6q-Del	0.935	1
RELN	Del_5q12.1	0.935	1
RQCD1	6q-Del	0.935	1
XIRP2	14q-Del	0.935	1
ZFX	10q-Del	0.935	1
ZNF780B	Del_10q23.31	0.935	1
20p-Amp	9p-Del	0.935	1
22q-Amp	Del_6q26	0.935	1
9q-Del	Amp_3p13	0.935	1
BRAF	EPHA6	0.936	1
DDX3X	Del_1p36.31	0.936	1
DDX3X	Del_4q34.3	0.936	1
MYO3B	PTEN	0.936	1
RAC1	Del_1p36.31	0.936	1
THSD7B	10p-Del	0.936	1
TPTE	Amp_22q13.2	0.936	1
USP9X	Del_14q23.3	0.936	1
APC	Amp_8q24.21	0.937	1
C15orf23	Del_6q26	0.937	1
C15orf23	Del_8p23.3	0.937	1
DCLK3	20p-Amp	0.937	1
FGFR2	7q-Amp	0.937	1
FLT1	7p-Amp	0.937	1
MLL	Amp_12q14.1	0.937	1
NBPF1	Del_2q37.3	0.937	1
PARM1	Del_15q21.1	0.937	1
PDGFRA	Amp_8q24.21	0.937	1
TPTE	Amp_12q14.1	0.937	1
20q-Amp	Del_16p13.3	0.937	1
7q-Amp	Amp_6q12	0.937	1
ATP5F1	Del_9p21.3	0.938	1
BRAF	20q-Amp	0.938	1
CBL	9q-Del	0.938	1
COL3A1	Del_5q31.3	0.938	1
CYP3A4	Del_9p23	0.938	1
DDX3X	Amp_7q34	0.938	1
DSG3	IDH1	0.938	1
DSG3	Amp_4q12	0.938	1
GNAQ	Del_9p21.3	0.938	1
IDH1	11p-Del	0.938	1
MAN1A1	11p-Del	0.938	1
NAP1L2	Amp_7q34	0.938	1
PPP6C	Del_9p23	0.938	1
ZFX	11p-Del	0.938	1
ZFX	Del_9p21.3	0.938	1
ARID2	Amp_17q25.3	0.939	1
ATP5F1	Del_10q23.31	0.939	1
BTK	Amp_1q21.3	0.939	1
CCK	Del_10q23.31	0.939	1
CCNA1	11q-Del	0.939	1
CDC42BPA	11q-Del	0.939	1
EPHA4	Amp_8q24.21	0.939	1
FAM58A	Del_10q23.31	0.939	1
FGFR2	Del_11q23.3	0.939	1
FLT1	6p-Amp	0.939	1
FLT1	Del_9p23	0.939	1
GLI1	11q-Del	0.939	1
IDH1	Amp_1q21.3	0.939	1
KEL	6p-Amp	0.939	1
KRAS	Del_10q23.31	0.939	1
MAN1A1	9q-Del	0.939	1
NUP214	9q-Del	0.939	1
NUP214	Amp_1q21.3	0.939	1
SLC9A11	Del_4q34.3	0.939	1
TP53	Del_6q21	0.939	1
TP53	Del_11q23.3	0.939	1
TTN	8p-Amp	0.939	1
USH2A	22q-Amp	0.939	1
ZFX	9q-Del	0.939	1
BRAF	EMG1	0.94	1
CDK4	10p-Del	0.94	1
CNTN5	Amp_5p15.33	0.94	1
DCLK3	Amp_7p22.1	0.94	1
EPHA7	Del_4q34.3	0.94	1
NRAS	SYK	0.94	1
NUDT11	10p-Del	0.94	1
S100A8	10p-Del	0.94	1
SLC9A11	20p-Amp	0.94	1
USH2A	Amp_11q13.3	0.94	1
Amp_11q13.3	Del_10q21.1	0.94	1
ARID2	Amp_6q12	0.941	1
ATP5F1	9p-Del	0.941	1
C7orf58	RAC1	0.941	1
CBL	Amp_7q34	0.941	1
CCK	9p-Del	0.941	1
CDKN2A	Del_16p13.3	0.941	1
CTNNA3	Amp_7q34	0.941	1
DDX3X	14q-Del	0.941	1
EPHA6	Amp_3p13	0.941	1
FAM58A	9p-Del	0.941	1
GNAQ	9p-Del	0.941	1
HSD11B1	Del_10q23.31	0.941	1
LGR6	Del_5q12.1	0.941	1
MLL	Amp_5p15.33	0.941	1
NBPF1	10p-Del	0.941	1
RPTN	Del_8p23.3	0.941	1
THSD7B	Amp_5p15.33	0.941	1
TTN	Del_1p22.1	0.941	1
XIRP2	10q-Del	0.941	1
14q-Del	Amp_6q12	0.941	1
16q-Del	Amp_20q13.33	0.941	1
Amp_6q12	Del_5q12.1	0.941	1
ALPK2	Amp_7p22.1	0.942	1
ANO4	Amp_15q26.2	0.942	1
BRAF	MYO3B	0.942	1
BTK	Amp_7q34	0.942	1
CCNA1	1q-Amp	0.942	1
GLI1	1q-Amp	0.942	1
GUCY2F	Amp_1p12	0.942	1
IDH1	Amp_7q34	0.942	1
LGR6	11q-Del	0.942	1
MPP7	8q-Amp	0.942	1
MYO16	Del_10q21.1	0.942	1
NUP214	Amp_7q34	0.942	1
PARM1	Del_15q13.3	0.942	1
PDGFRA	6q-Del	0.942	1
SLC38A4	Amp_1q44	0.942	1
THSD7B	Amp_7p22.1	0.942	1
TP63	Amp_20q13.33	0.942	1
XIRP2	16q-Del	0.942	1
ACSBG1	Del_9p21.3	0.943	1
ANO4	5q-Del	0.943	1
CAMTA1	Amp_3p13	0.943	1
CAMTA1	Del_10q26.3	0.943	1
MYO3B	8p-Amp	0.943	1
NAP1L2	Del_10q26.3	0.943	1
THSD7B	10q-Del	0.943	1
XIRP2	Amp_8q24.21	0.943	1
22q-Amp	11p-Del	0.943	1
ANO4	11q-Del	0.944	1
EPHA4	9p-Del	0.944	1
KCND2	Del_11q23.3	0.944	1
OR4S2	6p-Amp	0.944	1
POTEG	Del_13q34	0.944	1
PTEN	THSD7B	0.944	1
SLC9A11	Amp_7q34	0.944	1
TP63	Del_3q13.31	0.944	1
USP17L2	Amp_7p22.1	0.944	1
20p-Amp	Del_12q23.3	0.944	1
APC	Del_10p15.3	0.945	1
BRAF	Amp_20q13.33	0.945	1
CCK	Del_6q21	0.945	1
EPHA6	Del_10p15.3	0.945	1
FLT1	Amp_11q13.3	0.945	1
NF1	Del_1p22.1	0.945	1
NRAS	PTPN11	0.945	1
SLC27A5	Amp_7p22.1	0.945	1
TP63	20q-Amp	0.945	1
TPTE	Amp_8q24.21	0.945	1
TTN	Del_8p23.3	0.945	1
ZNF780B	Amp_7p22.1	0.945	1
Amp_11q13.3	Del_4q34.3	0.945	1
CPA3	Del_8p23.3	0.946	1
CYP3A4	1q-Amp	0.946	1
DDX3X	Del_8p23.3	0.946	1
EPHA6	Del_10q23.31	0.946	1
GUCY2F	20q-Amp	0.946	1
IDH1	8q-Amp	0.946	1
NRAS	Del_10q26.3	0.946	1
PARM1	20q-Amp	0.946	1
PTPN22	9q-Del	0.946	1
RAC1	Del_8p23.3	0.946	1
SELP	14q-Del	0.946	1
SLC9A11	14q-Del	0.946	1
TTN	Del_10q26.3	0.946	1
ZFX	8q-Amp	0.946	1
8p-Amp	9q-Del	0.946	1
Amp_1q44	Del_16q12.1	0.946	1
ALPK2	Del_5p15.31	0.947	1
DCLK3	1q-Amp	0.947	1
DSG3	Del_16q12.1	0.947	1
KYNU	Amp_8q24.21	0.947	1
KYNU	Del_11q23.3	0.947	1
MAP2K1	Amp_8q24.21	0.947	1
MPP7	Del_3q13.31	0.947	1
5q-Del	Amp_13q31.3	0.947	1
Del_3q13.31	Del_4p16.3	0.947	1
ANO4	6p-Amp	0.948	1
BRAF	POTEG	0.948	1
CNTN5	GML	0.948	1
KCND2	22q-Amp	0.948	1
NBPF1	10q-Del	0.948	1
RELN	Amp_6p24.3	0.948	1
XIRP2	Del_15q21.1	0.948	1
ARID2	6p-Del	0.949	1
ARID2	Amp_11q13.3	0.949	1
BRAF	CPA3	0.949	1
CTNNA3	8p-Amp	0.949	1
DSG3	MAP2K1	0.949	1
EPHA4	14q-Del	0.949	1
EPHA7	Amp_7p22.1	0.949	1
HSD11B1	Del_6q21	0.949	1
MAP2K1	11p-Del	0.949	1
S100A8	Del_10p15.3	0.949	1
TRERF1	Amp_3p13	0.949	1
6p-Amp	Del_12q23.3	0.949	1
7q-Amp	Amp_11q13.3	0.949	1
14q-Del	Amp_11q13.3	0.949	1
CDC42BPA	Del_11q23.3	0.95	1
DSG3	Del_16q24.3	0.95	1
EPHA7	8q-Amp	0.95	1
FRMPD4	18p-Del	0.95	1
KCND2	Amp_5p15.33	0.95	1
KRT73	Del_11q23.3	0.95	1
MAP2K1	6q-Del	0.95	1
MPP7	10p-Del	0.95	1
MYO16	Del_16q24.3	0.95	1
MYO3B	20p-Amp	0.95	1
OR6C74	Amp_1q44	0.95	1
PPP6C	Amp_1p12	0.95	1
TP53	8q-Amp	0.95	1
ANO4	20p-Amp	0.951	1
GNAQ	TTN	0.951	1
HSD11B1	10p-Del	0.951	1
MPP7	Amp_1p12	0.951	1
MPP7	Del_15q13.3	0.951	1
NF1	Del_10q23.31	0.951	1
TTN	Amp_22q13.2	0.951	1
ACSBG1	11q-Del	0.952	1
APC	Del_6q26	0.952	1
DSG3	Del_5p15.31	0.952	1
FLT1	Amp_13q31.3	0.952	1
MYO16	Del_8p23.3	0.952	1
MYO16	Del_19p13.3	0.952	1
MYO3B	Del_5q31.3	0.952	1
NAP1L2	8q-Amp	0.952	1
PDGFRA	Del_6q26	0.952	1
SELP	Del_15q21.1	0.952	1
SLC38A4	Del_15q21.1	0.952	1
TP63	22q-Amp	0.952	1
TRERF1	Del_9p21.3	0.952	1
Amp_13q31.3	Del_4q34.3	0.952	1
CAMTA1	Del_1p22.1	0.953	1
CDKN2A	Amp_1q21.3	0.953	1
CNTN5	Del_4q34.3	0.953	1
FLT1	Del_5q31.3	0.953	1
FRMPD4	Del_9p23	0.953	1
IDH1	Del_10q26.3	0.953	1
MAN1A1	Del_10q26.3	0.953	1
MPP7	22q-Amp	0.953	1
NF1	6p-Del	0.953	1
NUDT11	USH2A	0.953	1
NUP214	Del_9p23	0.953	1
NUP214	Del_10q26.3	0.953	1
PTEN	Amp_17q25.3	0.953	1
RELN	Amp_6q12	0.953	1
S100A8	Del_10q21.1	0.953	1
SLC9A11	Del_15q21.1	0.953	1
ZFX	Del_10q26.3	0.953	1
9p-Del	Amp_20q13.33	0.953	1
Amp_3p13	Del_16q12.1	0.953	1
ACSBG1	1q-Amp	0.954	1
APCS	1q-Amp	0.954	1
CPA3	Amp_5p15.33	0.954	1
CYP3A4	20q-Amp	0.954	1
CYP3A4	Amp_5p15.33	0.954	1
GUCY2F	Del_14q23.3	0.954	1
KCND2	8p-Amp	0.954	1
LGR6	20q-Amp	0.954	1
LGR6	Amp_5p15.33	0.954	1
NUP214	Amp_1q44	0.954	1
RAC1	17p-Del	0.954	1
USP17L2	Del_9p21.3	0.954	1
XIRP2	Del_10q21.1	0.954	1
10q-Del	Amp_6q12	0.954	1
ALPK2	Del_2q37.3	0.955	1
CCK	Del_6q26	0.955	1
CDK4	THSD7B	0.955	1
CNTN5	Amp_7q34	0.955	1
CTNNA3	20p-Amp	0.955	1
CTNNA3	18p-Del	0.955	1
EPHA6	Amp_1p12	0.955	1
EPHA6	Del_15q13.3	0.955	1
KRTAP5-10	Amp_1q21.3	0.955	1
OR4S2	Amp_22q13.2	0.955	1
POTEG	Amp_3p13	0.955	1
PTPN22	7p-Amp	0.955	1
TPTE	Del_15q21.1	0.955	1
18p-Del	Amp_3p13	0.955	1
CPA3	Amp_6p24.3	0.956	1
EPHA6	Del_3q13.31	0.956	1
FLT1	Amp_22q13.2	0.956	1
LGR6	Amp_6p24.3	0.956	1
MAP2K1	8q-Amp	0.956	1
MAP2K1	Amp_7q34	0.956	1
MLL	Del_4p16.3	0.956	1
MPP7	Amp_5p15.33	0.956	1
Amp_13q31.3	Del_5q12.1	0.956	1
ANO4	14q-Del	0.957	1
BRAF	8q-Amp	0.957	1
BRAF	Amp_12q14.1	0.957	1
DCLK3	9q-Del	0.957	1
EPHA6	10p-Del	0.957	1
EPHA6	Del_1p22.1	0.957	1
FGFR2	Amp_1q21.3	0.957	1
FLT1	Del_10q26.3	0.957	1
SLC38A4	Del_15q13.3	0.957	1
TRERF1	Del_10q26.3	0.957	1
XIRP2	10p-Del	0.957	1
ARID2	10p-Del	0.958	1
BRAF	Del_15q13.3	0.958	1
CBL	10p-Del	0.958	1
CTNNA3	Amp_1q44	0.958	1
CTNNA3	Del_16q23.1	0.958	1
DMC1	9p-Del	0.958	1
MYO16	22q-Amp	0.958	1
NRAS	Del_4p16.3	0.958	1
NUP214	Del_10q23.31	0.958	1
PARM1	Del_10q26.3	0.958	1
RB1	10p-Del	0.958	1
SELP	Amp_8q24.21	0.958	1
SLC38A4	22q-Amp	0.958	1
SLC9A11	Amp_7p22.1	0.958	1
ZFX	Del_10q23.31	0.958	1
ALPK2	Del_6q26	0.959	1
APC	Del_1p22.1	0.959	1
BRAF	Amp_1q21.3	0.959	1
C7orf58	Amp_1q21.3	0.959	1
DSG3	18p-Del	0.959	1
HSD11B1	7q-Amp	0.959	1
KCND2	Del_14q23.3	0.959	1
KCND2	Del_16q12.1	0.959	1
MPP7	Del_5p15.31	0.959	1
NBPF1	11p-Del	0.959	1
PDGFRA	Del_1p22.1	0.959	1
STK19	7q-Amp	0.959	1
TRERF1	Del_4p16.3	0.959	1
USP17L2	Amp_1q21.3	0.959	1
20q-Amp	Del_9p23	0.959	1
Amp_8q24.21	Del_13q34	0.959	1
ANO4	Amp_12q14.1	0.96	1
CNTN5	7q-Amp	0.96	1
CTNNA3	Del_5q31.3	0.96	1
EPHA7	10p-Del	0.96	1
FGFR2	Amp_7q34	0.96	1
MLL	Del_16q23.1	0.96	1
SLC38A4	10p-Del	0.96	1
SLC38A4	Del_10q26.3	0.96	1
THSD7B	1q-Amp	0.96	1
THSD7B	Amp_8q24.21	0.96	1
THSD7B	Del_15q21.1	0.96	1
TP63	Del_5p15.31	0.96	1
USP17L2	Del_8p23.3	0.96	1
XIRP2	Del_1p22.1	0.96	1
20q-Amp	Del_16q23.1	0.96	1
CNTN5	14q-Del	0.961	1
DDX3X	Del_14q23.3	0.961	1
EPHA4	20q-Amp	0.961	1
GUCY2F	6p-Amp	0.961	1
NUP214	9p-Del	0.961	1
RPTN	Amp_1q21.3	0.961	1
THSD7B	Del_16p13.3	0.961	1
TPTE	8q-Amp	0.961	1
USP17L2	11q-Del	0.961	1
22q-Amp	Del_6q21	0.961	1
Amp_6q12	Del_14q23.3	0.961	1
ALPK2	14q-Del	0.962	1
DMC1	Del_6q21	0.962	1
EPHA7	20q-Amp	0.962	1
PTEN	Del_11q23.3	0.962	1
SELP	Amp_5p15.33	0.962	1
SLC38A4	20q-Amp	0.962	1
TP53	Del_9p23	0.962	1
USP17L2	Amp_7q34	0.962	1
Amp_22q13.2	Del_12q23.3	0.962	1
C10orf54	Del_11q23.3	0.963	1
DMC1	Amp_8q24.21	0.963	1
GML	Amp_8q24.21	0.963	1
KEL	14q-Del	0.963	1
SELP	Del_5p15.31	0.963	1
SLC38A4	8p-Amp	0.963	1
USP17L2	Amp_1p12	0.963	1
XIRP2	6p-Del	0.963	1
20p-Amp	Del_9p23	0.963	1
Amp_20q13.33	Del_16p13.3	0.963	1
ACSBG1	7p-Amp	0.964	1
APC	Amp_1q44	0.964	1
CDKN2A	EPHA4	0.964	1
CDKN2A	Amp_11q13.3	0.964	1
CTNNA3	Del_6q26	0.964	1
DCLK3	Amp_17q25.3	0.964	1
DCLK3	Del_1p22.1	0.964	1
EPHA6	PTEN	0.964	1
FLT1	Del_10q23.31	0.964	1
HSD11B1	Del_6q26	0.964	1
IGF1R	7p-Amp	0.964	1
KCND2	Del_13q34	0.964	1
KEL	Del_10q23.31	0.964	1
KRTAP5-10	Amp_1q44	0.964	1
LGR6	Del_16q23.1	0.964	1
MLL	Del_10q26.3	0.964	1
MPP7	10q-Del	0.964	1
MPP7	18p-Del	0.964	1
MPP7	Del_2q37.3	0.964	1
NBPF1	Del_1p22.1	0.964	1
OR4S2	8q-Amp	0.964	1
OR4S2	Amp_1q21.3	0.964	1
PDGFRA	Amp_1q44	0.964	1
RAC1	10p-Del	0.964	1
STK19	1q-Amp	0.964	1
USP9X	Amp_1q21.3	0.964	1
ZNF780B	Amp_1q44	0.964	1
20p-Amp	Del_4p16.3	0.964	1
18p-Del	Amp_17q25.3	0.964	1
Amp_3p13	Del_6q26	0.964	1
CBL	Del_10p15.3	0.965	1
IGF1R	Del_11q23.3	0.965	1
NAP1L2	5q-Del	0.965	1
NUDT11	XIRP2	0.965	1
RB1	Del_10p15.3	0.965	1
RPTN	Del_1p22.1	0.965	1
SLC38A4	9q-Del	0.965	1
XIRP2	8q-Amp	0.965	1
ZFX	Del_6q21	0.965	1
BRAF	EPHA4	0.966	1
C10orf28	Del_6q21	0.966	1
C7orf58	11p-Del	0.966	1
CNTN5	7p-Amp	0.966	1
CNTN5	11q-Del	0.966	1
FLT1	1q-Amp	0.966	1
KYNU	Amp_1q44	0.966	1
NUP214	Del_5q31.3	0.966	1
PTPN22	9p-Del	0.966	1
S100A8	10q-Del	0.966	1
THSD7B	Del_2q37.3	0.966	1
TP53	6q-Del	0.966	1
TP63	20p-Amp	0.966	1
TTN	18p-Del	0.966	1
10q-Del	Amp_11q13.3	0.966	1
Amp_1q21.3	Del_12q23.3	0.966	1
ANO4	13q-Amp	0.967	1
BRAF	C10orf54	0.967	1
C7orf58	Del_3q13.31	0.967	1
CYP3A4	6p-Amp	0.967	1
DMC1	9q-Del	0.967	1
DMC1	Amp_1q21.3	0.967	1
EPHA4	Del_14q23.3	0.967	1
LGR6	6p-Amp	0.967	1
MAP2K1	Del_10q26.3	0.967	1
MYO3B	Amp_22q13.2	0.967	1
NAP1L2	10p-Del	0.967	1
NAP1L2	10q-Del	0.967	1
NF1	Del_5q31.3	0.967	1
PPP6C	6p-Amp	0.967	1
RPTN	6p-Del	0.967	1
RPTN	Amp_11q13.3	0.967	1
SLC38A4	Del_10q23.31	0.967	1
SLC9A11	Amp_6q12	0.967	1
20q-Amp	16q-Del	0.967	1
CBL	Del_10q21.1	0.968	1
CTNNA3	Amp_7p22.1	0.968	1
EPHA4	7p-Amp	0.968	1
FLT1	Del_8p23.3	0.968	1
KEL	Del_8p23.3	0.968	1
MYO16	18p-Del	0.968	1
NBPF1	Del_10q26.3	0.968	1
RB1	Del_10q21.1	0.968	1
RELN	5q-Del	0.968	1
SELP	20p-Amp	0.968	1
SLC38A4	20p-Amp	0.968	1
XIRP2	Amp_5p15.33	0.968	1
ZFX	7q-Amp	0.968	1
7p-Amp	Amp_11q13.3	0.968	1
C15orf23	Amp_22q13.2	0.969	1
CAMTA1	Del_1p36.31	0.969	1
CDKN2A	6p-Amp	0.969	1
CYP3A4	Del_10q26.3	0.969	1
DCLK3	Del_9p21.3	0.969	1
FLT1	PTEN	0.969	1
FLT1	8q-Amp	0.969	1
GUCY2F	Amp_20q13.33	0.969	1
KEL	22q-Amp	0.969	1
MAP2K1	Del_9p23	0.969	1
TP53	Del_6q26	0.969	1
ATP5F1	Del_9p23	0.97	1
BRAF	DMC1	0.97	1
BRAF	17p-Del	0.97	1
BRAF	Amp_5p15.33	0.97	1
C15orf23	Del_6q21	0.97	1
DSG3	Del_6q21	0.97	1
EPHA6	Del_5p15.31	0.97	1
FAM58A	Del_9p23	0.97	1
GNAQ	Del_9p23	0.97	1
MAN1A1	11q-Del	0.97	1
NAP1L2	Del_9p21.3	0.97	1
NF1	Del_3q13.31	0.97	1
SELP	Del_14q23.3	0.97	1
USP17L2	Del_9p23	0.97	1
APC	Del_6q21	0.971	1
KEL	Del_10q21.1	0.971	1
NBPF1	16q-Del	0.971	1
THSD7B	13q-Amp	0.971	1
TTN	Del_16p13.3	0.971	1
USH2A	Del_1p36.31	0.971	1
20p-Amp	16q-Del	0.971	1
6p-Amp	6q-Del	0.971	1
ARID2	22q-Amp	0.972	1
BRAF	13q-Amp	0.972	1
C7orf58	1q-Amp	0.972	1
C7orf58	22q-Amp	0.972	1
CTNNA3	Amp_20q13.33	0.972	1
FRMPD4	Del_1p22.1	0.972	1
HSD11B1	7p-Amp	0.972	1
MYO16	Del_13q34	0.972	1
NF1	14q-Del	0.972	1
SLC38A4	10q-Del	0.972	1
SLC38A4	Del_12q23.3	0.972	1
SLC9A11	6p-Del	0.972	1
STK19	7p-Amp	0.972	1
USH2A	Amp_5p15.33	0.972	1
USP17L2	Amp_1q44	0.972	1
8q-Amp	Del_13q34	0.972	1
ANO4	Amp_5p15.33	0.973	1
APC	Del_1p36.31	0.973	1
C10orf28	Del_6q26	0.973	1
EPHA4	Del_9p21.3	0.973	1
FLT1	Del_5p15.31	0.973	1
KCND2	11q-Del	0.973	1
KEL	8p-Amp	0.973	1
KRT73	Amp_8q24.21	0.973	1
MAP2K1	10p-Del	0.973	1
MYO16	Del_16q23.1	0.973	1
PDGFRA	Del_4q34.3	0.973	1
RAC1	Del_10p15.3	0.973	1
SLC38A4	Del_16q23.1	0.973	1
SLC9A11	Del_14q23.3	0.973	1
TRERF1	Del_4q34.3	0.973	1
C10orf54	Del_10q26.3	0.974	1
CTNNA3	Amp_8q24.21	0.974	1
CYP3A4	Del_10q23.31	0.974	1
DCLK3	5q-Del	0.974	1
EPHA6	5q-Del	0.974	1
MLL	Del_6q26	0.974	1
S100A8	Del_10q26.3	0.974	1
USH2A	Del_3q13.31	0.974	1
20q-Amp	9p-Del	0.974	1
Amp_6q12	Del_10q23.31	0.974	1
APC	10p-Del	0.975	1
CNTN5	6p-Del	0.975	1
CNTN5	Amp_11q13.3	0.975	1
CTNNA3	11p-Del	0.975	1
DCLK3	9p-Del	0.975	1
DMC1	Amp_1q44	0.975	1
EPHA6	Del_5q31.3	0.975	1
IDH1	Del_10q21.1	0.975	1
KEL	20q-Amp	0.975	1
LGR6	Amp_20q13.33	0.975	1
NAP1L2	Del_5q31.3	0.975	1
NAP1L2	Del_15q21.1	0.975	1
TP53	Del_15q13.3	0.975	1
TTN	Del_15q21.1	0.975	1
17p-Del	Del_1p36.31	0.975	1
APC	14q-Del	0.976	1
C15orf23	Del_16q24.3	0.976	1
CCNA1	Amp_1q21.3	0.976	1
EPHA7	6p-Amp	0.976	1
GUCY2F	8q-Amp	0.976	1
KIT	9q-Del	0.976	1
MAP2K1	11q-Del	0.976	1
MAP2K1	Del_6q21	0.976	1
MYO3B	8q-Amp	0.976	1
OR6C74	Del_11q23.3	0.976	1
S100A8	Del_10q23.31	0.976	1
TRERF1	Del_5q12.1	0.976	1
ZFX	Del_6q26	0.976	1
8p-Amp	Del_5q12.1	0.976	1
Amp_6p24.3	Del_1p22.1	0.976	1
ANO4	Amp_11q13.3	0.977	1
C15orf23	6q-Del	0.977	1
CTNNA3	Del_6q21	0.977	1
CTNNB1	NRAS	0.977	1
CYP3A4	Del_10q21.1	0.977	1
FGFR2	Del_1p36.31	0.977	1
FLT1	Del_2q37.3	0.977	1
KCND2	Amp_20q13.33	0.977	1
KCND2	Amp_22q13.2	0.977	1
KEL	18p-Del	0.977	1
KIT	Amp_7q34	0.977	1
NAP1L2	Del_10p15.3	0.977	1
RAC1	Del_10q21.1	0.977	1
S100A8	9p-Del	0.977	1
USP17L2	6p-Amp	0.977	1
ACSBG1	Amp_7p22.1	0.978	1
ANO4	Del_10p15.3	0.978	1
ARID2	20q-Amp	0.978	1
ARID2	Amp_5p15.33	0.978	1
CBL	10q-Del	0.978	1
CPA3	Amp_7p22.1	0.978	1
KEL	Amp_8q24.21	0.978	1
MSTN	Del_9p21.3	0.978	1
NF1	Del_10p15.3	0.978	1
RB1	10q-Del	0.978	1
RPTN	Amp_1q44	0.978	1
SELP	Amp_3p13	0.978	1
SLC38A4	Del_10q21.1	0.978	1
TRERF1	Del_8p23.3	0.978	1
ZNF780B	Del_10q21.1	0.978	1
20q-Amp	9q-Del	0.978	1
22q-Amp	6q-Del	0.978	1
ARID2	18p-Del	0.979	1
BRAF	20p-Amp	0.979	1
C7orf58	Del_2q37.3	0.979	1
CAMTA1	Amp_5p15.33	0.979	1
CNTN5	Amp_7p22.1	0.979	1
CTNNA3	Del_9p21.3	0.979	1
DDX3X	Del_6q21	0.979	1
EPHA7	Amp_1q44	0.979	1
LGR6	Del_9p23	0.979	1
NUP214	7p-Amp	0.979	1
PTEN	17p-Del	0.979	1
RAC1	Del_6q21	0.979	1
THSD7B	Del_10q21.1	0.979	1
BRAF	11p-Del	0.98	1
CNTN5	Del_5q31.3	0.98	1
CYP3A4	8q-Amp	0.98	1
FLT1	10p-Del	0.98	1
FRMPD4	5q-Del	0.98	1
KEL	Del_13q34	0.98	1
LGR6	8q-Amp	0.98	1
MPP7	Amp_22q13.2	0.98	1
MYO3B	5q-Del	0.98	1
NAP1L2	Del_10q21.1	0.98	1
OR4S2	7q-Amp	0.98	1
XIRP2	18p-Del	0.98	1
XIRP2	Del_10p15.3	0.98	1
7p-Amp	Amp_3p13	0.98	1
ANO4	Amp_13q31.3	0.981	1
CYP3A4	Amp_8q24.21	0.981	1
FGFR2	Del_15q21.1	0.981	1
LGR6	Amp_8q24.21	0.981	1
NBPF1	Del_15q21.1	0.981	1
PARM1	Amp_7q34	0.981	1
PTPN22	Del_9p21.3	0.981	1
RELN	Amp_15q26.2	0.981	1
SLC38A4	11q-Del	0.981	1
TP53	Amp_11q13.3	0.981	1
USP9X	10p-Del	0.981	1
7q-Amp	Del_5p15.31	0.981	1
Amp_11q13.3	Del_10q23.31	0.981	1
ALPK2	Del_14q23.3	0.982	1
GLI1	Amp_1q44	0.982	1
MAP2K1	Del_10q21.1	0.982	1
Amp_20q13.33	Del_16q12.1	0.982	1
BRAF	Amp_6q12	0.983	1
FGFR2	Amp_7p22.1	0.983	1
FGFR2	Del_15q13.3	0.983	1
HSD11B1	Amp_7p22.1	0.983	1
KCND2	8q-Amp	0.983	1
KRT73	Amp_6p24.3	0.983	1
LGR6	6q-Del	0.983	1
MPP7	Del_10q23.31	0.983	1
NAP1L2	Del_10q23.31	0.983	1
NBPF1	Del_15q13.3	0.983	1
OR4S2	1q-Amp	0.983	1
SELP	Amp_17q25.3	0.983	1
SLC38A4	Del_1p22.1	0.983	1
STK19	Amp_7p22.1	0.983	1
TRERF1	Amp_5p15.33	0.983	1
USH2A	6p-Del	0.983	1
6p-Amp	5q-Del	0.983	1
8p-Amp	17p-Del	0.983	1
CBL	Del_10q26.3	0.984	1
CDKN2A	Del_5p15.31	0.984	1
CDKN2A	Del_8p23.3	0.984	1
CYP3A4	Amp_1q21.3	0.984	1
DMC1	Del_10p15.3	0.984	1
EPHA4	8q-Amp	0.984	1
IGF1R	Amp_7q34	0.984	1
KRTAP5-10	Del_11q23.3	0.984	1
MAP2K1	7p-Amp	0.984	1
MAP2K1	Del_6q26	0.984	1
MLL	Amp_1p12	0.984	1
MLL	Del_16q24.3	0.984	1
RB1	Del_10q26.3	0.984	1
RELN	22q-Amp	0.984	1
THSD7B	Amp_11q13.3	0.984	1
TP63	Amp_11q13.3	0.984	1
BRAF	Amp_12q15	0.985	1
CBL	Del_10q23.31	0.985	1
CTNNA3	Del_1p36.31	0.985	1
CYP3A4	Del_9p21.3	0.985	1
EPHA6	10q-Del	0.985	1
EPHA6	Del_15q21.1	0.985	1
FLT1	Amp_3p13	0.985	1
FRMPD4	Del_5q12.1	0.985	1
IDH1	10q-Del	0.985	1
LGR6	Amp_7q34	0.985	1
PTPN22	Amp_1q21.3	0.985	1
RAC1	Del_9p21.3	0.985	1
SLC38A4	11p-Del	0.985	1
USH2A	Del_5p15.31	0.985	1
USP9X	Del_10p15.3	0.985	1
Amp_20q13.33	Del_16q23.1	0.985	1
BRAF	Del_12q23.3	0.986	1
CDC42BPA	10p-Del	0.986	1
DCLK3	Amp_8q24.21	0.986	1
DSG3	Del_6q26	0.986	1
HSD11B1	Amp_8q24.21	0.986	1
MYO3B	Del_15q21.1	0.986	1
NBPF1	11q-Del	0.986	1
PDGFRA	Amp_7q34	0.986	1
RB1	9p-Del	0.986	1
THSD7B	8q-Amp	0.986	1
9q-Del	Amp_20q13.33	0.986	1
C7orf58	6p-Amp	0.987	1
CTNNA3	14q-Del	0.987	1
DCLK3	Del_9p23	0.987	1
DDX3X	Del_6q26	0.987	1
EPHA7	Amp_8q24.21	0.987	1
FGFR2	Del_10p15.3	0.987	1
GUCY2F	Amp_6p24.3	0.987	1
LGR6	Del_6q26	0.987	1
RAC1	Del_6q26	0.987	1
SLC38A4	16q-Del	0.987	1
STK19	9q-Del	0.987	1
13q-Amp	Del_5q31.3	0.987	1
6p-Amp	Del_5q12.1	0.987	1
ALPK2	Del_19p13.3	0.988	1
CNTN5	Del_3q13.31	0.988	1
CYP3A4	10q-Del	0.988	1
EPHA6	Amp_11q13.3	0.988	1
FGFR2	9q-Del	0.988	1
FLT1	7q-Amp	0.988	1
NF1	10p-Del	0.988	1
NUP214	Amp_7p22.1	0.988	1
RAC1	10q-Del	0.988	1
RELN	Amp_5p15.33	0.988	1
SLC38A4	Del_9p23	0.988	1
20p-Amp	9q-Del	0.988	1
6p-Amp	Del_5q31.3	0.988	1
Amp_22q13.2	Del_3q13.31	0.988	1
APC	6p-Amp	0.989	1
BRAF	Amp_11q13.3	0.989	1
DDX3X	Del_5q31.3	0.989	1
MPP7	Del_10p15.3	0.989	1
NUP214	Amp_8q24.21	0.989	1
RELN	Amp_12q14.1	0.989	1
SLC38A4	8q-Amp	0.989	1
THSD7B	Amp_13q31.3	0.989	1
TTN	Del_3q13.31	0.989	1
ARID2	Del_1p22.1	0.99	1
BRAF	11q-Del	0.99	1
BTK	6q-Del	0.99	1
CTNNA3	Del_15q13.3	0.99	1
DCLK3	Del_10q26.3	0.99	1
FLT1	Amp_1q44	0.99	1
FLT1	Del_10q21.1	0.99	1
KCND2	Del_8p23.3	0.99	1
KEL	Amp_22q13.2	0.99	1
MAP2K1	10q-Del	0.99	1
THSD7B	Del_10q26.3	0.99	1
TTN	8q-Amp	0.99	1
TTN	Amp_11q13.3	0.99	1
ZFX	6q-Del	0.99	1
1q-Amp	Del_12q23.3	0.99	1
20p-Amp	Del_16q23.1	0.99	1
20q-Amp	Del_16q12.1	0.99	1
7p-Amp	Del_5p15.31	0.99	1
CNTN5	8q-Amp	0.991	1
CTNNA3	20q-Amp	0.991	1
DSG3	PTEN	0.991	1
IGF1R	NRAS	0.991	1
MAP2K1	Amp_7p22.1	0.991	1
MSTN	Del_10q23.31	0.991	1
PTPN22	Amp_1q44	0.991	1
SLC9A11	Del_15q13.3	0.991	1
STK19	Amp_1q44	0.991	1
XIRP2	Amp_11q13.3	0.991	1
ARID2	Amp_20q13.33	0.992	1
CTNNA3	7q-Amp	0.992	1
EPHA4	7q-Amp	0.992	1
FGFR2	9p-Del	0.992	1
MLL	6q-Del	0.992	1
SLC38A4	14q-Del	0.992	1
SLC9A11	8q-Amp	0.992	1
SLC9A11	Amp_5p15.33	0.992	1
THSD7B	Amp_12q14.1	0.992	1
TRERF1	Amp_20q13.33	0.992	1
TTN	Del_5p15.31	0.992	1
ALPK2	18p-Del	0.993	1
APCS	Del_10q21.1	0.993	1
BRAF	1q-Amp	0.993	1
BRAF	Amp_13q31.3	0.993	1
CNTN5	Amp_12q14.1	0.993	1
COL3A1	Amp_11q13.3	0.993	1
CTNNA3	Del_14q23.3	0.993	1
CYP3A4	10p-Del	0.993	1
FAM58A	Del_9p21.3	0.993	1
FGFR2	Amp_1q44	0.993	1
KEL	8q-Amp	0.993	1
KRAS	Del_9p21.3	0.993	1
MAP2K1	Amp_1q21.3	0.993	1
MPP7	Del_10q26.3	0.993	1
NF1	10q-Del	0.993	1
OR4S2	Amp_7p22.1	0.993	1
RAC1	Del_10q26.3	0.993	1
RB1	Del_9p21.3	0.993	1
RPTN	Amp_3p13	0.993	1
6q-Del	Amp_15q26.2	0.993	1
Amp_13q31.3	Del_5q31.3	0.993	1
APC	8q-Amp	0.994	1
EPHA6	Del_10q26.3	0.994	1
FLT1	Amp_8q24.21	0.994	1
NF1	Del_10q21.1	0.994	1
RAC1	9p-Del	0.994	1
RAC1	Del_10q23.31	0.994	1
TTN	Amp_4q12	0.994	1
CTNNA3	6p-Amp	0.995	1
DCLK3	8q-Amp	0.995	1
DCLK3	10p-Del	0.995	1
DSG3	Del_12q23.3	0.995	1
FLT1	14q-Del	0.995	1
KEL	Amp_1q21.3	0.995	1
LGR6	Del_6q21	0.995	1
MAP2K1	Del_10q23.31	0.995	1
RB1	Del_9p23	0.995	1
RELN	Amp_3p13	0.995	1
SLC38A4	Del_9p21.3	0.995	1
SLC9A11	Amp_3p13	0.995	1
TP53	Amp_1q44	0.995	1
Amp_1q44	Del_12q23.3	0.995	1
ANO4	Amp_3p13	0.996	1
APC	Del_10q26.3	0.996	1
BRAF	Amp_1q44	0.996	1
CTNNA3	Del_10q21.1	0.996	1
CTNNA3	Del_10q26.3	0.996	1
FGFR2	Del_9p23	0.996	1
FGFR2	Del_9p21.3	0.996	1
FLT1	Amp_7q34	0.996	1
LGR6	Del_9p21.3	0.996	1
MAP2K1	Amp_1q44	0.996	1
NRAS	7q-Amp	0.996	1
NRAS	Amp_4q12	0.996	1
NRAS	Del_1p22.1	0.996	1
NRAS	Del_2q37.3	0.996	1
OR4S2	Amp_7q34	0.996	1
PTPN22	Amp_7p22.1	0.996	1
SLC38A4	Del_14q23.3	0.996	1
SLC9A11	6p-Amp	0.996	1
USH2A	Amp_6q12	0.996	1
APC	Del_10q21.1	0.997	1
APC	Del_10q23.31	0.997	1
BRAF	IDH1	0.997	1
BRAF	PDGFRA	0.997	1
BRAF	Amp_1p12	0.997	1
BRAF	Del_5p15.31	0.997	1
BRAF	Del_11q23.3	0.997	1
CTNNA3	Amp_6p24.3	0.997	1
CTNNA3	Del_10q23.31	0.997	1
EPHA6	Del_10q21.1	0.997	1
GUCY2F	Amp_8q24.21	0.997	1
HSD11B1	Del_9p23	0.997	1
NF1	Del_10q26.3	0.997	1
NRAS	7p-Amp	0.997	1
NUP214	Del_10p15.3	0.997	1
NUP214	Del_10q21.1	0.997	1
OR4S2	Amp_1q44	0.997	1
OR4S2	Amp_6p24.3	0.997	1
SLC38A4	Amp_8q24.21	0.997	1
SLC9A11	Amp_8q24.21	0.997	1
THSD7B	6p-Del	0.997	1
THSD7B	Del_5p15.31	0.997	1
ANO4	10q-Del	0.998	1
ANO4	Del_10q21.1	0.998	1
ANO4	Del_10q23.31	0.998	1
ANO4	Del_10q26.3	0.998	1
BRAF	RB1	0.998	1
BRAF	6p-Amp	0.998	1
BRAF	Amp_17q25.3	0.998	1
CTNNA3	8q-Amp	0.998	1
CTNNA3	10p-Del	0.998	1
CTNNA3	10q-Del	0.998	1
DCLK3	Amp_1q21.3	0.998	1
DCLK3	Del_10q21.1	0.998	1
DCLK3	Del_10q23.31	0.998	1
DDX3X	6q-Del	0.998	1
FGFR2	Del_10q21.1	0.998	1
FLT1	Del_14q23.3	0.998	1
KEL	1q-Amp	0.998	1
KEL	Amp_1q44	0.998	1
RAC1	6q-Del	0.998	1
THSD7B	18p-Del	0.998	1
TP53	Del_1p22.1	0.998	1
TP53	Del_9p21.3	0.998	1
USH2A	Del_1p22.1	0.998	1
XIRP2	Del_5p15.31	0.998	1
Amp_7q34	Del_5p15.31	0.998	1
ANO4	10p-Del	0.999	1
APC	10q-Del	0.999	1
BRAF	NF1	0.999	1
BRAF	Amp_6p24.3	0.999	1
C7orf58	Amp_22q13.2	0.999	1
CTNNA3	Del_10p15.3	0.999	1
CYP3A4	Amp_1q44	0.999	1
DCLK3	10q-Del	0.999	1
DCLK3	Amp_1q44	0.999	1
EPHA4	Amp_7q34	0.999	1
FGFR2	10p-Del	0.999	1
FGFR2	10q-Del	0.999	1
FLT1	Del_10p15.3	0.999	1
HSD11B1	9p-Del	0.999	1
HSD11B1	Del_9p21.3	0.999	1
KEL	10p-Del	0.999	1
MAP2K1	Del_11q23.3	0.999	1
MYO3B	Amp_8q24.21	0.999	1
RAC1	Del_9p23	0.999	1
RELN	Del_5p15.31	0.999	1
SLC38A4	9p-Del	0.999	1
TTN	6p-Del	0.999	1
TTN	Amp_5p15.33	0.999	1
ACSBG1	C10orf54	1	1
ACSBG1	CBL	1	1
ACSBG1	CCK	1	1
ACSBG1	CTNNB1	1	1
ACSBG1	CYP3A5	1	1
ACSBG1	DDX3X	1	1
ACSBG1	EMG1	1	1
ACSBG1	FAM58A	1	1
ACSBG1	GML	1	1
ACSBG1	GNAQ	1	1
ACSBG1	GUCY2F	1	1
ACSBG1	KRAS	1	1
ACSBG1	PTEN	1	1
ACSBG1	PTPN11	1	1
ACSBG1	RB1	1	1
ACSBG1	RQCD1	1	1
ACSBG1	13q-Amp	1	1
ACSBG1	20p-Amp	1	1
ACSBG1	8p-Amp	1	1
ACSBG1	16q-Del	1	1
ACSBG1	18p-Del	1	1
ACSBG1	5q-Del	1	1
ACSBG1	Amp_1q21.3	1	1
ACSBG1	Amp_3p13	1	1
ACSBG1	Amp_4q12	1	1
ACSBG1	Amp_6q12	1	1
ACSBG1	Amp_11q13.3	1	1
ACSBG1	Amp_12q14.1	1	1
ACSBG1	Amp_12q15	1	1
ACSBG1	Amp_13q31.3	1	1
ACSBG1	Amp_15q26.2	1	1
ACSBG1	Amp_17q25.3	1	1
ACSBG1	Del_3q13.31	1	1
ACSBG1	Del_5p15.31	1	1
ACSBG1	Del_12q23.3	1	1
ACSBG1	Del_13q34	1	1
ACSBG1	Del_15q21.1	1	1
ACSBG1	Del_16p13.3	1	1
ACSBG1	Del_16q12.1	1	1
ACSBG1	Del_16q23.1	1	1
ACSBG1	Del_16q24.3	1	1
ACSBG1	Del_19p13.3	1	1
ACSBG1	Del_Xp21.1	1	1
ALPK2	CDK4	1	1
ALPK2	KRAS	1	1
ALPK2	Del_16p13.3	1	1
ANO4	CDK4	1	1
ANO4	Del_Xp21.1	1	1
APC	CDK4	1	1
APC	EMG1	1	1
APC	GML	1	1
APC	HRAS	1	1
APC	NGF	1	1
APC	8p-Amp	1	1
APC	6p-Del	1	1
APC	Amp_6q12	1	1
APC	Amp_12q14.1	1	1
APC	Del_2q37.3	1	1
APC	Del_8p23.3	1	1
APC	Del_19p13.3	1	1
APCS	C10orf28	1	1
APCS	C10orf54	1	1
APCS	C15orf23	1	1
APCS	CBL	1	1
APCS	CCK	1	1
APCS	CCNA1	1	1
APCS	CYP3A5	1	1
APCS	EZH2	1	1
APCS	FAM58A	1	1
APCS	GNAQ	1	1
APCS	KRAS	1	1
APCS	MAP2K1	1	1
APCS	NGF	1	1
APCS	NUDT11	1	1
APCS	PTPN11	1	1
APCS	RAC1	1	1
APCS	RB1	1	1
APCS	RIPK4	1	1
APCS	RQCD1	1	1
APCS	SLC27A5	1	1
APCS	STK19	1	1
APCS	8p-Amp	1	1
APCS	8q-Amp	1	1
APCS	18p-Del	1	1
APCS	Amp_3p13	1	1
APCS	Amp_4q12	1	1
APCS	Amp_8q24.21	1	1
APCS	Amp_11q13.3	1	1
APCS	Amp_12q14.1	1	1
APCS	Amp_12q15	1	1
APCS	Del_1p22.1	1	1
APCS	Del_3q13.31	1	1
APCS	Del_5p15.31	1	1
ARID2	C10orf28	1	1
ARID2	EMG1	1	1
ARID2	MAP2K1	1	1
ARID2	RB1	1	1
ARID2	20p-Amp	1	1
ARID2	Amp_4q12	1	1
ARID2	Amp_12q14.1	1	1
ARID2	Del_Xp21.1	1	1
ATP5F1	C10orf28	1	1
ATP5F1	C10orf54	1	1
ATP5F1	CBL	1	1
ATP5F1	CCK	1	1
ATP5F1	CCNA1	1	1
ATP5F1	CDK4	1	1
ATP5F1	CTNNB1	1	1
ATP5F1	CYP3A5	1	1
ATP5F1	DDX3X	1	1
ATP5F1	DMC1	1	1
ATP5F1	EMG1	1	1
ATP5F1	FAM58A	1	1
ATP5F1	GML	1	1
ATP5F1	GNAQ	1	1
ATP5F1	HRAS	1	1
ATP5F1	IDH1	1	1
ATP5F1	KRAS	1	1
ATP5F1	NGF	1	1
ATP5F1	NUDT11	1	1
ATP5F1	PTEN	1	1
ATP5F1	RB1	1	1
ATP5F1	RQCD1	1	1
ATP5F1	SLC27A5	1	1
ATP5F1	13q-Amp	1	1
ATP5F1	6p-Amp	1	1
ATP5F1	7p-Amp	1	1
ATP5F1	7q-Amp	1	1
ATP5F1	8p-Amp	1	1
ATP5F1	8q-Amp	1	1
ATP5F1	14q-Del	1	1
ATP5F1	16q-Del	1	1
ATP5F1	5q-Del	1	1
ATP5F1	6p-Del	1	1
ATP5F1	Amp_3p13	1	1
ATP5F1	Amp_4q12	1	1
ATP5F1	Amp_5p15.33	1	1
ATP5F1	Amp_6q12	1	1
ATP5F1	Amp_7q34	1	1
ATP5F1	Amp_8q24.21	1	1
ATP5F1	Amp_11q13.3	1	1
ATP5F1	Amp_12q14.1	1	1
ATP5F1	Amp_12q15	1	1
ATP5F1	Amp_13q31.3	1	1
ATP5F1	Amp_15q26.2	1	1
ATP5F1	Del_1p22.1	1	1
ATP5F1	Del_2q37.3	1	1
ATP5F1	Del_3q13.31	1	1
ATP5F1	Del_4p16.3	1	1
ATP5F1	Del_4q34.3	1	1
ATP5F1	Del_5p15.31	1	1
ATP5F1	Del_5q12.1	1	1
ATP5F1	Del_5q31.3	1	1
ATP5F1	Del_10q26.3	1	1
ATP5F1	Del_12q23.3	1	1
ATP5F1	Del_14q23.3	1	1
ATP5F1	Del_15q13.3	1	1
ATP5F1	Del_15q21.1	1	1
ATP5F1	Del_16p13.3	1	1
ATP5F1	Del_16q12.1	1	1
ATP5F1	Del_19p13.3	1	1
ATP5F1	Del_Xp21.1	1	1
BRAF	KIT	1	1
BRAF	NRAS	1	1
BTK	C10orf28	1	1
BTK	C10orf54	1	1
BTK	CCK	1	1
BTK	CCNA1	1	1
BTK	CDC42BPA	1	1
BTK	CDK4	1	1
BTK	EMG1	1	1
BTK	EZH2	1	1
BTK	FAM58A	1	1
BTK	GLI1	1	1
BTK	GNAQ	1	1
BTK	KIT	1	1
BTK	MSTN	1	1
BTK	NGF	1	1
BTK	NUDT11	1	1
BTK	OR6C74	1	1
BTK	RB1	1	1
BTK	22q-Amp	1	1
BTK	5q-Del	1	1
BTK	Amp_1p12	1	1
BTK	Amp_4q12	1	1
BTK	Amp_11q13.3	1	1
BTK	Amp_12q14.1	1	1
BTK	Amp_12q15	1	1
BTK	Del_1p36.31	1	1
BTK	Del_1p22.1	1	1
BTK	Del_5p15.31	1	1
BTK	Del_8p23.3	1	1
BTK	Del_12q23.3	1	1
BTK	Del_15q21.1	1	1
BTK	Del_16p13.3	1	1
BTK	Del_Xp21.1	1	1
C10orf28	C10orf54	1	1
C10orf28	CBL	1	1
C10orf28	CDK4	1	1
C10orf28	CTNNB1	1	1
C10orf28	FAM58A	1	1
C10orf28	FRMPD4	1	1
C10orf28	GML	1	1
C10orf28	GNAQ	1	1
C10orf28	HRAS	1	1
C10orf28	IGF1R	1	1
C10orf28	KIT	1	1
C10orf28	KRAS	1	1
C10orf28	KRT73	1	1
C10orf28	KRTAP5-10	1	1
C10orf28	NF1	1	1
C10orf28	NUDT11	1	1
C10orf28	NUP214	1	1
C10orf28	OR6C74	1	1
C10orf28	OXA1L	1	1
C10orf28	PARM1	1	1
C10orf28	PTEN	1	1
C10orf28	PTPN11	1	1
C10orf28	RAC1	1	1
C10orf28	RB1	1	1
C10orf28	S100A8	1	1
C10orf28	SLC27A5	1	1
C10orf28	STK19	1	1
C10orf28	USP9X	1	1
C10orf28	ZFX	1	1
C10orf28	ZNF780B	1	1
C10orf28	14q-Del	1	1
C10orf28	16q-Del	1	1
C10orf28	18p-Del	1	1
C10orf28	6p-Del	1	1
C10orf28	Amp_3p13	1	1
C10orf28	Amp_4q12	1	1
C10orf28	Amp_6q12	1	1
C10orf28	Amp_11q13.3	1	1
C10orf28	Amp_12q14.1	1	1
C10orf28	Amp_12q15	1	1
C10orf28	Amp_15q26.2	1	1
C10orf28	Del_1p36.31	1	1
C10orf28	Del_1p22.1	1	1
C10orf28	Del_2q37.3	1	1
C10orf28	Del_4q34.3	1	1
C10orf28	Del_12q23.3	1	1
C10orf28	Del_14q23.3	1	1
C10orf28	Del_16p13.3	1	1
C10orf28	Del_16q12.1	1	1
C10orf28	Del_16q23.1	1	1
C10orf28	Del_19p13.3	1	1
C10orf28	Del_Xp21.1	1	1
C10orf54	CAMTA1	1	1
C10orf54	CCK	1	1
C10orf54	CCNA1	1	1
C10orf54	CDK4	1	1
C10orf54	CTNNB1	1	1
C10orf54	CYP3A4	1	1
C10orf54	CYP3A5	1	1
C10orf54	DMC1	1	1
C10orf54	EMG1	1	1
C10orf54	EPHA4	1	1
C10orf54	GLI1	1	1
C10orf54	GML	1	1
C10orf54	GNAQ	1	1
C10orf54	HRAS	1	1
C10orf54	HSD11B1	1	1
C10orf54	IDH1	1	1
C10orf54	IGF1R	1	1
C10orf54	KRAS	1	1
C10orf54	KRTAP5-10	1	1
C10orf54	KYNU	1	1
C10orf54	MAP2K1	1	1
C10orf54	MYO16	1	1
C10orf54	NGF	1	1
C10orf54	NUDT11	1	1
C10orf54	OR6C74	1	1
C10orf54	POTEG	1	1
C10orf54	PPP6C	1	1
C10orf54	PTPN11	1	1
C10orf54	PTPN22	1	1
C10orf54	RIPK4	1	1
C10orf54	RQCD1	1	1
C10orf54	S100A8	1	1
C10orf54	SELP	1	1
C10orf54	STK19	1	1
C10orf54	SYK	1	1
C10orf54	USP17L2	1	1
C10orf54	USP9X	1	1
C10orf54	13q-Amp	1	1
C10orf54	20p-Amp	1	1
C10orf54	22q-Amp	1	1
C10orf54	8p-Amp	1	1
C10orf54	8q-Amp	1	1
C10orf54	10p-Del	1	1
C10orf54	10q-Del	1	1
C10orf54	14q-Del	1	1
C10orf54	16q-Del	1	1
C10orf54	18p-Del	1	1
C10orf54	6p-Del	1	1
C10orf54	Amp_1p12	1	1
C10orf54	Amp_4q12	1	1
C10orf54	Amp_6q12	1	1
C10orf54	Amp_8q24.21	1	1
C10orf54	Amp_11q13.3	1	1
C10orf54	Amp_12q14.1	1	1
C10orf54	Amp_12q15	1	1
C10orf54	Amp_15q26.2	1	1
C10orf54	Del_1p36.31	1	1
C10orf54	Del_2q37.3	1	1
C10orf54	Del_4p16.3	1	1
C10orf54	Del_4q34.3	1	1
C10orf54	Del_8p23.3	1	1
C10orf54	Del_10p15.3	1	1
C10orf54	Del_10q21.1	1	1
C10orf54	Del_10q23.31	1	1
C10orf54	Del_12q23.3	1	1
C10orf54	Del_14q23.3	1	1
C10orf54	Del_15q13.3	1	1
C10orf54	Del_15q21.1	1	1
C10orf54	Del_16p13.3	1	1
C10orf54	Del_16q12.1	1	1
C10orf54	Del_16q23.1	1	1
C10orf54	Del_16q24.3	1	1
C10orf54	Del_19p13.3	1	1
C10orf54	Del_Xp21.1	1	1
C15orf23	CDK4	1	1
C15orf23	EMG1	1	1
C15orf23	GML	1	1
C15orf23	HRAS	1	1
C15orf23	HSD11B1	1	1
C15orf23	IGF1R	1	1
C15orf23	KIT	1	1
C15orf23	KRAS	1	1
C15orf23	KRTAP5-10	1	1
C15orf23	KYNU	1	1
C15orf23	NUDT11	1	1
C15orf23	OR6C74	1	1
C15orf23	RQCD1	1	1
C15orf23	SLC27A5	1	1
C15orf23	USP9X	1	1
C15orf23	13q-Amp	1	1
C15orf23	22q-Amp	1	1
C15orf23	16q-Del	1	1
C15orf23	Amp_4q12	1	1
C15orf23	Amp_12q14.1	1	1
C15orf23	Amp_12q15	1	1
C15orf23	Amp_13q31.3	1	1
C15orf23	Amp_15q26.2	1	1
C15orf23	Del_15q13.3	1	1
C15orf23	Del_15q21.1	1	1
C15orf23	Del_16p13.3	1	1
C15orf23	Del_16q12.1	1	1
C15orf23	Del_16q23.1	1	1
C15orf23	Del_Xp21.1	1	1
C7orf58	CDK4	1	1
C7orf58	EMG1	1	1
C7orf58	GML	1	1
C7orf58	KRAS	1	1
C7orf58	NUDT11	1	1
C7orf58	Amp_3p13	1	1
C7orf58	Amp_4q12	1	1
C7orf58	Amp_12q15	1	1
CAMTA1	CBL	1	1
CAMTA1	FAM58A	1	1
CAMTA1	GML	1	1
CAMTA1	GNAQ	1	1
CAMTA1	HRAS	1	1
CAMTA1	IDH1	1	1
CAMTA1	NUDT11	1	1
CAMTA1	13q-Amp	1	1
CAMTA1	6p-Del	1	1
CAMTA1	Amp_6q12	1	1
CAMTA1	Amp_13q31.3	1	1
CAMTA1	Del_5p15.31	1	1
CAMTA1	Del_Xp21.1	1	1
CBL	CCK	1	1
CBL	CCNA1	1	1
CBL	CDC42BPA	1	1
CBL	CDK4	1	1
CBL	CDKN2A	1	1
CBL	CPA3	1	1
CBL	CTNNB1	1	1
CBL	DDX3X	1	1
CBL	DMC1	1	1
CBL	EMG1	1	1
CBL	FGFR2	1	1
CBL	GNAQ	1	1
CBL	HRAS	1	1
CBL	HSD11B1	1	1
CBL	IDH1	1	1
CBL	IGF1R	1	1
CBL	KRTAP5-10	1	1
CBL	KYNU	1	1
CBL	LGR6	1	1
CBL	MAP2K1	1	1
CBL	NGF	1	1
CBL	OR4S2	1	1
CBL	OR6C74	1	1
CBL	OXA1L	1	1
CBL	POTEG	1	1
CBL	PTEN	1	1
CBL	PTPN11	1	1
CBL	PTPN22	1	1
CBL	RIPK4	1	1
CBL	RQCD1	1	1
CBL	S100A8	1	1
CBL	SELP	1	1
CBL	SLC27A5	1	1
CBL	SYK	1	1
CBL	USP9X	1	1
CBL	ZFX	1	1
CBL	13q-Amp	1	1
CBL	20p-Amp	1	1
CBL	20q-Amp	1	1
CBL	22q-Amp	1	1
CBL	8p-Amp	1	1
CBL	16q-Del	1	1
CBL	18p-Del	1	1
CBL	5q-Del	1	1
CBL	Amp_1p12	1	1
CBL	Amp_4q12	1	1
CBL	Amp_12q15	1	1
CBL	Amp_13q31.3	1	1
CBL	Amp_15q26.2	1	1
CBL	Del_1p36.31	1	1
CBL	Del_1p22.1	1	1
CBL	Del_2q37.3	1	1
CBL	Del_4p16.3	1	1
CBL	Del_5q31.3	1	1
CBL	Del_12q23.3	1	1
CBL	Del_16p13.3	1	1
CBL	Del_16q23.1	1	1
CBL	Del_16q24.3	1	1
CBL	Del_19p13.3	1	1
CBL	Del_Xp21.1	1	1
CCK	CDK4	1	1
CCK	CPA3	1	1
CCK	CTNNB1	1	1
CCK	CYP3A4	1	1
CCK	DCLK3	1	1
CCK	DMC1	1	1
CCK	EMG1	1	1
CCK	EPHA4	1	1
CCK	EZH2	1	1
CCK	FAM58A	1	1
CCK	FRMPD4	1	1
CCK	GNAQ	1	1
CCK	GUCY2F	1	1
CCK	HRAS	1	1
CCK	IDH1	1	1
CCK	IGF1R	1	1
CCK	KCND2	1	1
CCK	KRAS	1	1
CCK	KRT73	1	1
CCK	KRTAP5-10	1	1
CCK	MLL	1	1
CCK	NAP1L2	1	1
CCK	NF1	1	1
CCK	NGF	1	1
CCK	NUDT11	1	1
CCK	OR4S2	1	1
CCK	OR6C74	1	1
CCK	OXA1L	1	1
CCK	PARM1	1	1
CCK	POTEG	1	1
CCK	PTEN	1	1
CCK	PTPN11	1	1
CCK	RAC1	1	1
CCK	RB1	1	1
CCK	RELN	1	1
CCK	RIPK4	1	1
CCK	RQCD1	1	1
CCK	S100A8	1	1
CCK	SLC27A5	1	1
CCK	STK19	1	1
CCK	USP17L2	1	1
CCK	USP9X	1	1
CCK	ZNF780B	1	1
CCK	20p-Amp	1	1
CCK	11p-Del	1	1
CCK	11q-Del	1	1
CCK	14q-Del	1	1
CCK	16q-Del	1	1
CCK	18p-Del	1	1
CCK	6p-Del	1	1
CCK	Amp_5p15.33	1	1
CCK	Amp_6q12	1	1
CCK	Amp_11q13.3	1	1
CCK	Amp_12q14.1	1	1
CCK	Amp_12q15	1	1
CCK	Amp_15q26.2	1	1
CCK	Amp_17q25.3	1	1
CCK	Del_1p36.31	1	1
CCK	Del_1p22.1	1	1
CCK	Del_2q37.3	1	1
CCK	Del_4p16.3	1	1
CCK	Del_4q34.3	1	1
CCK	Del_12q23.3	1	1
CCK	Del_14q23.3	1	1
CCK	Del_15q13.3	1	1
CCK	Del_15q21.1	1	1
CCK	Del_16p13.3	1	1
CCK	Del_16q12.1	1	1
CCK	Del_16q23.1	1	1
CCK	Del_16q24.3	1	1
CCK	Del_19p13.3	1	1
CCK	Del_Xp21.1	1	1
CCNA1	CDK4	1	1
CCNA1	DMC1	1	1
CCNA1	EMG1	1	1
CCNA1	FAM58A	1	1
CCNA1	GML	1	1
CCNA1	HRAS	1	1
CCNA1	KIT	1	1
CCNA1	KRAS	1	1
CCNA1	KRT73	1	1
CCNA1	KRTAP5-10	1	1
CCNA1	NAP1L2	1	1
CCNA1	OR6C74	1	1
CCNA1	OXA1L	1	1
CCNA1	POTEG	1	1
CCNA1	RB1	1	1
CCNA1	13q-Amp	1	1
CCNA1	20p-Amp	1	1
CCNA1	8p-Amp	1	1
CCNA1	Amp_4q12	1	1
CCNA1	Amp_6q12	1	1
CCNA1	Amp_11q13.3	1	1
CCNA1	Amp_12q14.1	1	1
CCNA1	Amp_13q31.3	1	1
CCNA1	Amp_15q26.2	1	1
CCNA1	Amp_17q25.3	1	1
CCNA1	Del_3q13.31	1	1
CCNA1	Del_5p15.31	1	1
CCNA1	Del_Xp21.1	1	1
CDC42BPA	CDK4	1	1
CDC42BPA	DMC1	1	1
CDC42BPA	EMG1	1	1
CDC42BPA	KRAS	1	1
CDC42BPA	MAP2K1	1	1
CDC42BPA	NGF	1	1
CDC42BPA	NUDT11	1	1
CDC42BPA	PTPN11	1	1
CDC42BPA	S100A8	1	1
CDC42BPA	SLC27A5	1	1
CDC42BPA	13q-Amp	1	1
CDC42BPA	22q-Amp	1	1
CDC42BPA	8p-Amp	1	1
CDC42BPA	14q-Del	1	1
CDC42BPA	18p-Del	1	1
CDC42BPA	6p-Del	1	1
CDC42BPA	Amp_4q12	1	1
CDC42BPA	Amp_6q12	1	1
CDC42BPA	Amp_7p22.1	1	1
CDC42BPA	Amp_11q13.3	1	1
CDC42BPA	Amp_12q14.1	1	1
CDC42BPA	Amp_13q31.3	1	1
CDC42BPA	Amp_15q26.2	1	1
CDC42BPA	Del_1p36.31	1	1
CDC42BPA	Del_1p22.1	1	1
CDC42BPA	Del_2q37.3	1	1
CDC42BPA	Del_3q13.31	1	1
CDC42BPA	Del_5p15.31	1	1
CDC42BPA	Del_14q23.3	1	1
CDC42BPA	Del_16p13.3	1	1
CDC42BPA	Del_19p13.3	1	1
CDC42BPA	Del_Xp21.1	1	1
CDK4	COL3A1	1	1
CDK4	CPA3	1	1
CDK4	CTNNA3	1	1
CDK4	CTNNB1	1	1
CDK4	DCLK3	1	1
CDK4	DDX3X	1	1
CDK4	DMC1	1	1
CDK4	EPHA4	1	1
CDK4	EZH2	1	1
CDK4	FAM58A	1	1
CDK4	FLT1	1	1
CDK4	GLI1	1	1
CDK4	GML	1	1
CDK4	GNAQ	1	1
CDK4	GUCY2F	1	1
CDK4	HRAS	1	1
CDK4	HSD11B1	1	1
CDK4	IDH1	1	1
CDK4	IGF1R	1	1
CDK4	KCND2	1	1
CDK4	KEL	1	1
CDK4	KIT	1	1
CDK4	KRAS	1	1
CDK4	KRT73	1	1
CDK4	MAN1A1	1	1
CDK4	MAP2K1	1	1
CDK4	MPP7	1	1
CDK4	MYO16	1	1
CDK4	MYO3B	1	1
CDK4	NAP1L2	1	1
CDK4	NGF	1	1
CDK4	NUDT11	1	1
CDK4	OR6C74	1	1
CDK4	OXA1L	1	1
CDK4	PPP6C	1	1
CDK4	PTPN11	1	1
CDK4	PTPN22	1	1
CDK4	RAC1	1	1
CDK4	RB1	1	1
CDK4	RIPK4	1	1
CDK4	RPTN	1	1
CDK4	RQCD1	1	1
CDK4	S100A8	1	1
CDK4	SLC27A5	1	1
CDK4	SLC38A4	1	1
CDK4	SLC9A11	1	1
CDK4	SYK	1	1
CDK4	TRERF1	1	1
CDK4	USP17L2	1	1
CDK4	USP9X	1	1
CDK4	ZFX	1	1
CDK4	ZNF780B	1	1
CDK4	13q-Amp	1	1
CDK4	1q-Amp	1	1
CDK4	20p-Amp	1	1
CDK4	16q-Del	1	1
CDK4	6p-Del	1	1
CDK4	Amp_3p13	1	1
CDK4	Amp_6q12	1	1
CDK4	Amp_12q14.1	1	1
CDK4	Amp_12q15	1	1
CDK4	Amp_13q31.3	1	1
CDK4	Amp_15q26.2	1	1
CDK4	Amp_17q25.3	1	1
CDK4	Del_1p36.31	1	1
CDK4	Del_1p22.1	1	1
CDK4	Del_2q37.3	1	1
CDK4	Del_13q34	1	1
CDK4	Del_15q21.1	1	1
CDK4	Del_Xp21.1	1	1
CDKN2A	GML	1	1
CDKN2A	KIT	1	1
CDKN2A	KRAS	1	1
CDKN2A	KRTAP5-10	1	1
CDKN2A	RB1	1	1
CDKN2A	13q-Amp	1	1
CDKN2A	Amp_12q14.1	1	1
CDKN2A	Amp_13q31.3	1	1
CDKN2A	Amp_15q26.2	1	1
CDKN2A	Del_Xp21.1	1	1
CNTN5	HRAS	1	1
CNTN5	Del_Xp21.1	1	1
COL3A1	EMG1	1	1
COL3A1	Del_Xp21.1	1	1
CPA3	CYP3A5	1	1
CPA3	EMG1	1	1
CPA3	FAM58A	1	1
CPA3	GML	1	1
CPA3	GNAQ	1	1
CPA3	HRAS	1	1
CPA3	IDH1	1	1
CPA3	KRAS	1	1
CPA3	NUDT11	1	1
CPA3	PTEN	1	1
CPA3	PTPN11	1	1
CPA3	SLC27A5	1	1
CPA3	7p-Amp	1	1
CPA3	7q-Amp	1	1
CPA3	Amp_3p13	1	1
CPA3	Amp_4q12	1	1
CPA3	Amp_6q12	1	1
CPA3	Amp_7q34	1	1
CPA3	Amp_12q14.1	1	1
CPA3	Del_Xp21.1	1	1
CTNNA3	CTNNB1	1	1
CTNNA3	HRAS	1	1
CTNNA3	KRAS	1	1
CTNNA3	PTEN	1	1
CTNNA3	RB1	1	1
CTNNA3	13q-Amp	1	1
CTNNA3	Amp_11q13.3	1	1
CTNNA3	Amp_12q14.1	1	1
CTNNA3	Amp_13q31.3	1	1
CTNNA3	Amp_15q26.2	1	1
CTNNA3	Del_4q34.3	1	1
CTNNA3	Del_13q34	1	1
CTNNA3	Del_15q21.1	1	1
CTNNA3	Del_16p13.3	1	1
CTNNA3	Del_Xp21.1	1	1
CTNNB1	CYP3A5	1	1
CTNNB1	DDX3X	1	1
CTNNB1	EMG1	1	1
CTNNB1	EPHA4	1	1
CTNNB1	FAM58A	1	1
CTNNB1	GML	1	1
CTNNB1	HRAS	1	1
CTNNB1	HSD11B1	1	1
CTNNB1	KRAS	1	1
CTNNB1	KYNU	1	1
CTNNB1	MSTN	1	1
CTNNB1	NGF	1	1
CTNNB1	NUDT11	1	1
CTNNB1	OR6C74	1	1
CTNNB1	PDGFRA	1	1
CTNNB1	RB1	1	1
CTNNB1	SLC9A11	1	1
CTNNB1	ZFX	1	1
CTNNB1	ZNF780B	1	1
CTNNB1	6p-Del	1	1
CTNNB1	Amp_4q12	1	1
CTNNB1	Del_5p15.31	1	1
CTNNB1	Del_Xp21.1	1	1
CYP3A4	DDX3X	1	1
CYP3A4	FAM58A	1	1
CYP3A4	HRAS	1	1
CYP3A4	NUDT11	1	1
CYP3A4	SLC27A5	1	1
CYP3A4	8p-Amp	1	1
CYP3A4	6p-Del	1	1
CYP3A4	Amp_6q12	1	1
CYP3A4	Amp_11q13.3	1	1
CYP3A4	Amp_12q14.1	1	1
CYP3A4	Amp_15q26.2	1	1
CYP3A4	Del_2q37.3	1	1
CYP3A4	Del_5p15.31	1	1
CYP3A4	Del_13q34	1	1
CYP3A5	DMC1	1	1
CYP3A5	EZH2	1	1
CYP3A5	FAM58A	1	1
CYP3A5	GNAQ	1	1
CYP3A5	HRAS	1	1
CYP3A5	HSD11B1	1	1
CYP3A5	IDH1	1	1
CYP3A5	KIT	1	1
CYP3A5	NUDT11	1	1
CYP3A5	OXA1L	1	1
CYP3A5	PPP6C	1	1
CYP3A5	PTPN11	1	1
CYP3A5	RB1	1	1
CYP3A5	RQCD1	1	1
CYP3A5	SLC27A5	1	1
CYP3A5	USP17L2	1	1
CYP3A5	Amp_6q12	1	1
CYP3A5	Del_1p36.31	1	1
CYP3A5	Del_Xp21.1	1	1
DCLK3	GML	1	1
DCLK3	IDH1	1	1
DCLK3	KRAS	1	1
DCLK3	NUDT11	1	1
DCLK3	SLC27A5	1	1
DCLK3	Amp_4q12	1	1
DCLK3	Amp_11q13.3	1	1
DCLK3	Amp_15q26.2	1	1
DCLK3	Del_Xp21.1	1	1
DDX3X	EMG1	1	1
DDX3X	FAM58A	1	1
DDX3X	GNAQ	1	1
DDX3X	HRAS	1	1
DDX3X	HSD11B1	1	1
DDX3X	IDH1	1	1
DDX3X	KIT	1	1
DDX3X	NGF	1	1
DDX3X	NUDT11	1	1
DDX3X	NUP214	1	1
DDX3X	OXA1L	1	1
DDX3X	PTPN11	1	1
DDX3X	RB1	1	1
DDX3X	RQCD1	1	1
DDX3X	S100A8	1	1
DDX3X	SLC27A5	1	1
DDX3X	SLC38A4	1	1
DDX3X	Del_Xp21.1	1	1
DMC1	EMG1	1	1
DMC1	EZH2	1	1
DMC1	FAM58A	1	1
DMC1	GNAQ	1	1
DMC1	GUCY2F	1	1
DMC1	HRAS	1	1
DMC1	KCND2	1	1
DMC1	KIT	1	1
DMC1	KRAS	1	1
DMC1	MYO16	1	1
DMC1	NAP1L2	1	1
DMC1	OR4S2	1	1
DMC1	OXA1L	1	1
DMC1	PARM1	1	1
DMC1	PTEN	1	1
DMC1	PTPN11	1	1
DMC1	RAC1	1	1
DMC1	RB1	1	1
DMC1	RQCD1	1	1
DMC1	S100A8	1	1
DMC1	SLC27A5	1	1
DMC1	STK19	1	1
DMC1	SYK	1	1
DMC1	ZFX	1	1
DMC1	1q-Amp	1	1
DMC1	6p-Amp	1	1
DMC1	10p-Del	1	1
DMC1	10q-Del	1	1
DMC1	11p-Del	1	1
DMC1	14q-Del	1	1
DMC1	16q-Del	1	1
DMC1	18p-Del	1	1
DMC1	5q-Del	1	1
DMC1	6p-Del	1	1
DMC1	Amp_1p12	1	1
DMC1	Amp_4q12	1	1
DMC1	Amp_11q13.3	1	1
DMC1	Amp_12q14.1	1	1
DMC1	Amp_12q15	1	1
DMC1	Amp_17q25.3	1	1
DMC1	Del_2q37.3	1	1
DMC1	Del_3q13.31	1	1
DMC1	Del_4p16.3	1	1
DMC1	Del_4q34.3	1	1
DMC1	Del_5p15.31	1	1
DMC1	Del_5q12.1	1	1
DMC1	Del_8p23.3	1	1
DMC1	Del_10q21.1	1	1
DMC1	Del_10q23.31	1	1
DMC1	Del_10q26.3	1	1
DMC1	Del_13q34	1	1
DMC1	Del_14q23.3	1	1
DMC1	Del_15q13.3	1	1
DMC1	Del_15q21.1	1	1
DMC1	Del_16p13.3	1	1
DMC1	Del_16q12.1	1	1
DMC1	Del_16q23.1	1	1
DMC1	Del_16q24.3	1	1
DMC1	Del_Xp21.1	1	1
DSG3	NUDT11	1	1
DSG3	Del_Xp21.1	1	1
EMG1	EZH2	1	1
EMG1	FAM58A	1	1
EMG1	FRMPD4	1	1
EMG1	GLI1	1	1
EMG1	GML	1	1
EMG1	GNAQ	1	1
EMG1	GUCY2F	1	1
EMG1	HRAS	1	1
EMG1	HSD11B1	1	1
EMG1	IGF1R	1	1
EMG1	KEL	1	1
EMG1	KIT	1	1
EMG1	KRAS	1	1
EMG1	KRT73	1	1
EMG1	KRTAP5-10	1	1
EMG1	KYNU	1	1
EMG1	LGR6	1	1
EMG1	MAN1A1	1	1
EMG1	MAP2K1	1	1
EMG1	MSTN	1	1
EMG1	MYO16	1	1
EMG1	MYO3B	1	1
EMG1	NBPF1	1	1
EMG1	NGF	1	1
EMG1	NUDT11	1	1
EMG1	NUP214	1	1
EMG1	OR6C74	1	1
EMG1	OXA1L	1	1
EMG1	PPP6C	1	1
EMG1	PTEN	1	1
EMG1	PTPN11	1	1
EMG1	PTPN22	1	1
EMG1	RAC1	1	1
EMG1	RB1	1	1
EMG1	RIPK4	1	1
EMG1	RQCD1	1	1
EMG1	S100A8	1	1
EMG1	SLC27A5	1	1
EMG1	STK19	1	1
EMG1	SYK	1	1
EMG1	TPTE	1	1
EMG1	TRERF1	1	1
EMG1	USP9X	1	1
EMG1	ZFX	1	1
EMG1	ZNF780B	1	1
EMG1	22q-Amp	1	1
EMG1	7p-Amp	1	1
EMG1	18p-Del	1	1
EMG1	6p-Del	1	1
EMG1	Amp_3p13	1	1
EMG1	Amp_4q12	1	1
EMG1	Amp_5p15.33	1	1
EMG1	Amp_6q12	1	1
EMG1	Amp_7p22.1	1	1
EMG1	Amp_11q13.3	1	1
EMG1	Amp_12q15	1	1
EMG1	Amp_15q26.2	1	1
EMG1	Amp_17q25.3	1	1
EMG1	Amp_22q13.2	1	1
EMG1	Del_2q37.3	1	1
EMG1	Del_5p15.31	1	1
EMG1	Del_12q23.3	1	1
EMG1	Del_13q34	1	1
EMG1	Del_16p13.3	1	1
EMG1	Del_Xp21.1	1	1
EPHA4	EZH2	1	1
EPHA4	FAM58A	1	1
EPHA4	NUDT11	1	1
EPHA4	PTPN11	1	1
EPHA4	RB1	1	1
EPHA4	RQCD1	1	1
EPHA4	8p-Amp	1	1
EPHA4	Amp_11q13.3	1	1
EPHA4	Amp_15q26.2	1	1
EPHA4	Del_3q13.31	1	1
EPHA4	Del_15q13.3	1	1
EPHA4	Del_15q21.1	1	1
EPHA4	Del_16p13.3	1	1
EPHA4	Del_Xp21.1	1	1
EPHA6	GNAQ	1	1
EPHA6	RQCD1	1	1
EPHA6	Del_Xp21.1	1	1
EPHA7	HRAS	1	1
EPHA7	KRAS	1	1
EPHA7	NUDT11	1	1
EPHA7	ZFX	1	1
EPHA7	20p-Amp	1	1
EPHA7	6p-Del	1	1
EPHA7	Del_Xp21.1	1	1
EZH2	FAM58A	1	1
EZH2	FGFR2	1	1
EZH2	GLI1	1	1
EZH2	HRAS	1	1
EZH2	IDH1	1	1
EZH2	KIT	1	1
EZH2	KRAS	1	1
EZH2	KRT73	1	1
EZH2	KRTAP5-10	1	1
EZH2	KYNU	1	1
EZH2	MSTN	1	1
EZH2	NAP1L2	1	1
EZH2	NGF	1	1
EZH2	NUDT11	1	1
EZH2	OR6C74	1	1
EZH2	POTEG	1	1
EZH2	RB1	1	1
EZH2	SLC27A5	1	1
EZH2	SYK	1	1
EZH2	TRERF1	1	1
EZH2	20p-Amp	1	1
EZH2	20q-Amp	1	1
EZH2	22q-Amp	1	1
EZH2	8p-Amp	1	1
EZH2	18p-Del	1	1
EZH2	6p-Del	1	1
EZH2	Amp_4q12	1	1
EZH2	Amp_11q13.3	1	1
EZH2	Amp_12q14.1	1	1
EZH2	Amp_20q13.33	1	1
EZH2	Amp_22q13.2	1	1
EZH2	Del_5p15.31	1	1
EZH2	Del_16p13.3	1	1
EZH2	Del_19p13.3	1	1
EZH2	Del_Xp21.1	1	1
FAM58A	GLI1	1	1
FAM58A	GNAQ	1	1
FAM58A	GUCY2F	1	1
FAM58A	HRAS	1	1
FAM58A	HSD11B1	1	1
FAM58A	IDH1	1	1
FAM58A	IGF1R	1	1
FAM58A	KRTAP5-10	1	1
FAM58A	KYNU	1	1
FAM58A	MAP2K1	1	1
FAM58A	NGF	1	1
FAM58A	NRAS	1	1
FAM58A	NUDT11	1	1
FAM58A	OR4S2	1	1
FAM58A	OR6C74	1	1
FAM58A	POTEG	1	1
FAM58A	PPP6C	1	1
FAM58A	PTPN11	1	1
FAM58A	PTPN22	1	1
FAM58A	RIPK4	1	1
FAM58A	RQCD1	1	1
FAM58A	S100A8	1	1
FAM58A	SELP	1	1
FAM58A	SLC27A5	1	1
FAM58A	STK19	1	1
FAM58A	SYK	1	1
FAM58A	USP17L2	1	1
FAM58A	USP9X	1	1
FAM58A	ZFX	1	1
FAM58A	ZNF780B	1	1
FAM58A	13q-Amp	1	1
FAM58A	20p-Amp	1	1
FAM58A	20q-Amp	1	1
FAM58A	22q-Amp	1	1
FAM58A	6p-Amp	1	1
FAM58A	8p-Amp	1	1
FAM58A	8q-Amp	1	1
FAM58A	10p-Del	1	1
FAM58A	11p-Del	1	1
FAM58A	14q-Del	1	1
FAM58A	16q-Del	1	1
FAM58A	18p-Del	1	1
FAM58A	5q-Del	1	1
FAM58A	Amp_1p12	1	1
FAM58A	Amp_3p13	1	1
FAM58A	Amp_4q12	1	1
FAM58A	Amp_5p15.33	1	1
FAM58A	Amp_11q13.3	1	1
FAM58A	Amp_12q14.1	1	1
FAM58A	Amp_12q15	1	1
FAM58A	Amp_13q31.3	1	1
FAM58A	Amp_15q26.2	1	1
FAM58A	Amp_22q13.2	1	1
FAM58A	Del_1p36.31	1	1
FAM58A	Del_1p22.1	1	1
FAM58A	Del_2q37.3	1	1
FAM58A	Del_3q13.31	1	1
FAM58A	Del_4p16.3	1	1
FAM58A	Del_5p15.31	1	1
FAM58A	Del_5q31.3	1	1
FAM58A	Del_8p23.3	1	1
FAM58A	Del_10p15.3	1	1
FAM58A	Del_12q23.3	1	1
FAM58A	Del_14q23.3	1	1
FAM58A	Del_15q21.1	1	1
FAM58A	Del_16p13.3	1	1
FAM58A	Del_16q12.1	1	1
FAM58A	Del_16q23.1	1	1
FAM58A	Del_16q24.3	1	1
FAM58A	Del_19p13.3	1	1
FAM58A	Del_Xp21.1	1	1
FGFR2	GNAQ	1	1
FGFR2	IDH1	1	1
FGFR2	KRAS	1	1
FGFR2	NUDT11	1	1
FGFR2	RB1	1	1
FGFR2	RQCD1	1	1
FGFR2	SLC27A5	1	1
FGFR2	13q-Amp	1	1
FGFR2	14q-Del	1	1
FGFR2	6p-Del	1	1
FGFR2	Amp_12q14.1	1	1
FGFR2	Amp_12q15	1	1
FGFR2	Amp_15q26.2	1	1
FGFR2	Del_2q37.3	1	1
FGFR2	Del_3q13.31	1	1
FGFR2	Del_10q23.31	1	1
FGFR2	Del_10q26.3	1	1
FGFR2	Del_14q23.3	1	1
FGFR2	Del_16p13.3	1	1
FGFR2	Del_Xp21.1	1	1
FLT1	KRAS	1	1
FLT1	NGF	1	1
FLT1	RB1	1	1
FLT1	Del_Xp21.1	1	1
FRMPD4	HRAS	1	1
FRMPD4	IDH1	1	1
FRMPD4	MAP2K1	1	1
FRMPD4	NUDT11	1	1
FRMPD4	6p-Del	1	1
FRMPD4	Del_5p15.31	1	1
FRMPD4	Del_Xp21.1	1	1
GLI1	HRAS	1	1
GLI1	NRAS	1	1
GLI1	PTEN	1	1
GLI1	PTPN11	1	1
GLI1	RB1	1	1
GLI1	RQCD1	1	1
GLI1	ZFX	1	1
GLI1	14q-Del	1	1
GLI1	Del_1p36.31	1	1
GLI1	Del_5p15.31	1	1
GLI1	Del_14q23.3	1	1
GLI1	Del_Xp21.1	1	1
GML	HRAS	1	1
GML	HSD11B1	1	1
GML	IDH1	1	1
GML	IGF1R	1	1
GML	KRT73	1	1
GML	MAN1A1	1	1
GML	MAP2K1	1	1
GML	NBPF1	1	1
GML	NGF	1	1
GML	NUDT11	1	1
GML	OR6C74	1	1
GML	OXA1L	1	1
GML	PPP6C	1	1
GML	PTEN	1	1
GML	PTPN11	1	1
GML	RQCD1	1	1
GML	S100A8	1	1
GML	SLC27A5	1	1
GML	STK19	1	1
GML	USP9X	1	1
GML	ZNF780B	1	1
GML	8p-Amp	1	1
GML	14q-Del	1	1
GML	Amp_12q14.1	1	1
GML	Amp_12q15	1	1
GML	Del_2q37.3	1	1
GML	Del_8p23.3	1	1
GML	Del_16p13.3	1	1
GML	Del_Xp21.1	1	1
GNAQ	HRAS	1	1
GNAQ	HSD11B1	1	1
GNAQ	IDH1	1	1
GNAQ	KIT	1	1
GNAQ	KRAS	1	1
GNAQ	KRT73	1	1
GNAQ	KRTAP5-10	1	1
GNAQ	KYNU	1	1
GNAQ	MAP2K1	1	1
GNAQ	MSTN	1	1
GNAQ	MYO3B	1	1
GNAQ	NBPF1	1	1
GNAQ	NGF	1	1
GNAQ	NUDT11	1	1
GNAQ	OR6C74	1	1
GNAQ	OXA1L	1	1
GNAQ	PARM1	1	1
GNAQ	PDGFRA	1	1
GNAQ	PTPN11	1	1
GNAQ	RAC1	1	1
GNAQ	RB1	1	1
GNAQ	S100A8	1	1
GNAQ	SELP	1	1
GNAQ	SLC27A5	1	1
GNAQ	13q-Amp	1	1
GNAQ	20p-Amp	1	1
GNAQ	20q-Amp	1	1
GNAQ	11p-Del	1	1
GNAQ	11q-Del	1	1
GNAQ	14q-Del	1	1
GNAQ	18p-Del	1	1
GNAQ	9q-Del	1	1
GNAQ	Amp_4q12	1	1
GNAQ	Amp_12q14.1	1	1
GNAQ	Amp_13q31.3	1	1
GNAQ	Amp_15q26.2	1	1
GNAQ	Amp_17q25.3	1	1
GNAQ	Amp_20q13.33	1	1
GNAQ	Del_1p22.1	1	1
GNAQ	Del_2q37.3	1	1
GNAQ	Del_3q13.31	1	1
GNAQ	Del_5p15.31	1	1
GNAQ	Del_13q34	1	1
GNAQ	Del_14q23.3	1	1
GNAQ	Del_16p13.3	1	1
GNAQ	Del_Xp21.1	1	1
GUCY2F	HRAS	1	1
GUCY2F	HSD11B1	1	1
GUCY2F	KRAS	1	1
GUCY2F	MAP2K1	1	1
GUCY2F	NUDT11	1	1
GUCY2F	PTPN11	1	1
GUCY2F	RAC1	1	1
GUCY2F	RB1	1	1
GUCY2F	13q-Amp	1	1
GUCY2F	20p-Amp	1	1
GUCY2F	22q-Amp	1	1
GUCY2F	8p-Amp	1	1
GUCY2F	18p-Del	1	1
GUCY2F	Amp_4q12	1	1
GUCY2F	Amp_13q31.3	1	1
GUCY2F	Del_Xp21.1	1	1
HRAS	IDH1	1	1
HRAS	KIT	1	1
HRAS	KRAS	1	1
HRAS	KYNU	1	1
HRAS	MAN1A1	1	1
HRAS	MAP2K1	1	1
HRAS	MLL	1	1
HRAS	MPP7	1	1
HRAS	MSTN	1	1
HRAS	MYO16	1	1
HRAS	NGF	1	1
HRAS	NUDT11	1	1
HRAS	NUP214	1	1
HRAS	OR4S2	1	1
HRAS	OR6C74	1	1
HRAS	OXA1L	1	1
HRAS	PARM1	1	1
HRAS	POTEG	1	1
HRAS	PPP6C	1	1
HRAS	PTEN	1	1
HRAS	PTPN11	1	1
HRAS	PTPN22	1	1
HRAS	RAC1	1	1
HRAS	RB1	1	1
HRAS	RIPK4	1	1
HRAS	RQCD1	1	1
HRAS	S100A8	1	1
HRAS	SLC27A5	1	1
HRAS	STK19	1	1
HRAS	SYK	1	1
HRAS	TP53	1	1
HRAS	TP63	1	1
HRAS	TRERF1	1	1
HRAS	ZNF780B	1	1
HRAS	13q-Amp	1	1
HRAS	1q-Amp	1	1
HRAS	20p-Amp	1	1
HRAS	20q-Amp	1	1
HRAS	22q-Amp	1	1
HRAS	7p-Amp	1	1
HRAS	7q-Amp	1	1
HRAS	8p-Amp	1	1
HRAS	11p-Del	1	1
HRAS	11q-Del	1	1
HRAS	14q-Del	1	1
HRAS	16q-Del	1	1
HRAS	17p-Del	1	1
HRAS	18p-Del	1	1
HRAS	5q-Del	1	1
HRAS	6p-Del	1	1
HRAS	Amp_1p12	1	1
HRAS	Amp_1q21.3	1	1
HRAS	Amp_3p13	1	1
HRAS	Amp_4q12	1	1
HRAS	Amp_5p15.33	1	1
HRAS	Amp_7p22.1	1	1
HRAS	Amp_7q34	1	1
HRAS	Amp_11q13.3	1	1
HRAS	Amp_12q14.1	1	1
HRAS	Amp_12q15	1	1
HRAS	Amp_13q31.3	1	1
HRAS	Amp_15q26.2	1	1
HRAS	Amp_17q25.3	1	1
HRAS	Amp_20q13.33	1	1
HRAS	Amp_22q13.2	1	1
HRAS	Del_2q37.3	1	1
HRAS	Del_3q13.31	1	1
HRAS	Del_5p15.31	1	1
HRAS	Del_5q12.1	1	1
HRAS	Del_5q31.3	1	1
HRAS	Del_11q23.3	1	1
HRAS	Del_12q23.3	1	1
HRAS	Del_13q34	1	1
HRAS	Del_14q23.3	1	1
HRAS	Del_15q13.3	1	1
HRAS	Del_15q21.1	1	1
HRAS	Del_16p13.3	1	1
HRAS	Del_16q23.1	1	1
HRAS	Del_16q24.3	1	1
HRAS	Del_19p13.3	1	1
HRAS	Del_Xp21.1	1	1
HSD11B1	IDH1	1	1
HSD11B1	NGF	1	1
HSD11B1	NUDT11	1	1
HSD11B1	RB1	1	1
HSD11B1	STK19	1	1
HSD11B1	20p-Amp	1	1
HSD11B1	20q-Amp	1	1
HSD11B1	6p-Del	1	1
HSD11B1	Amp_3p13	1	1
HSD11B1	Amp_4q12	1	1
HSD11B1	Amp_5p15.33	1	1
HSD11B1	Amp_11q13.3	1	1
HSD11B1	Amp_12q14.1	1	1
HSD11B1	Amp_12q15	1	1
HSD11B1	Amp_17q25.3	1	1
HSD11B1	Amp_20q13.33	1	1
HSD11B1	Del_1p22.1	1	1
HSD11B1	Del_3q13.31	1	1
HSD11B1	Del_8p23.3	1	1
HSD11B1	Del_12q23.3	1	1
HSD11B1	Del_16p13.3	1	1
HSD11B1	Del_Xp21.1	1	1
IDH1	KRT73	1	1
IDH1	KRTAP5-10	1	1
IDH1	MAN1A1	1	1
IDH1	MSTN	1	1
IDH1	NAP1L2	1	1
IDH1	NUDT11	1	1
IDH1	NUP214	1	1
IDH1	OR6C74	1	1
IDH1	OXA1L	1	1
IDH1	PTPN11	1	1
IDH1	RIPK4	1	1
IDH1	S100A8	1	1
IDH1	SLC9A11	1	1
IDH1	SYK	1	1
IDH1	ZNF780B	1	1
IDH1	22q-Amp	1	1
IDH1	11q-Del	1	1
IDH1	18p-Del	1	1
IDH1	6p-Del	1	1
IDH1	Amp_1p12	1	1
IDH1	Amp_3p13	1	1
IDH1	Amp_12q14.1	1	1
IDH1	Amp_22q13.2	1	1
IDH1	Del_1p22.1	1	1
IDH1	Del_2q37.3	1	1
IDH1	Del_3q13.31	1	1
IDH1	Del_8p23.3	1	1
IDH1	Del_15q21.1	1	1
IGF1R	NUDT11	1	1
IGF1R	PTPN11	1	1
IGF1R	RB1	1	1
IGF1R	S100A8	1	1
IGF1R	SLC27A5	1	1
IGF1R	13q-Amp	1	1
IGF1R	22q-Amp	1	1
IGF1R	7q-Amp	1	1
IGF1R	11p-Del	1	1
IGF1R	11q-Del	1	1
IGF1R	6p-Del	1	1
IGF1R	Amp_13q31.3	1	1
IGF1R	Amp_15q26.2	1	1
IGF1R	Del_1p36.31	1	1
IGF1R	Del_1p22.1	1	1
IGF1R	Del_2q37.3	1	1
IGF1R	Del_3q13.31	1	1
IGF1R	Del_5p15.31	1	1
IGF1R	Del_16p13.3	1	1
IGF1R	Del_Xp21.1	1	1
KCND2	KRAS	1	1
KCND2	NUDT11	1	1
KCND2	18p-Del	1	1
KCND2	Amp_4q12	1	1
KCND2	Amp_6q12	1	1
KCND2	Amp_12q14.1	1	1
KCND2	Del_3q13.31	1	1
KCND2	Del_16p13.3	1	1
KCND2	Del_19p13.3	1	1
KEL	20p-Amp	1	1
KEL	Amp_11q13.3	1	1
KEL	Del_10p15.3	1	1
KEL	Del_Xp21.1	1	1
KIT	NGF	1	1
KIT	NUDT11	1	1
KIT	PTEN	1	1
KIT	PTPN11	1	1
KIT	RIPK4	1	1
KIT	RQCD1	1	1
KIT	STK19	1	1
KIT	ZFX	1	1
KIT	Amp_3p13	1	1
KIT	Amp_12q15	1	1
KIT	Del_13q34	1	1
KIT	Del_Xp21.1	1	1
KRAS	KRT73	1	1
KRAS	KRTAP5-10	1	1
KRAS	KYNU	1	1
KRAS	LGR6	1	1
KRAS	MAP2K1	1	1
KRAS	MPP7	1	1
KRAS	NGF	1	1
KRAS	NRAS	1	1
KRAS	NUDT11	1	1
KRAS	NUP214	1	1
KRAS	OR4S2	1	1
KRAS	OR6C74	1	1
KRAS	PARM1	1	1
KRAS	POTEG	1	1
KRAS	PPP6C	1	1
KRAS	PTPN11	1	1
KRAS	PTPN22	1	1
KRAS	RIPK4	1	1
KRAS	RQCD1	1	1
KRAS	S100A8	1	1
KRAS	SELP	1	1
KRAS	SLC9A11	1	1
KRAS	STK19	1	1
KRAS	SYK	1	1
KRAS	USP17L2	1	1
KRAS	ZFX	1	1
KRAS	ZNF780B	1	1
KRAS	22q-Amp	1	1
KRAS	7p-Amp	1	1
KRAS	7q-Amp	1	1
KRAS	11p-Del	1	1
KRAS	14q-Del	1	1
KRAS	18p-Del	1	1
KRAS	9p-Del	1	1
KRAS	Amp_7q34	1	1
KRAS	Amp_15q26.2	1	1
KRAS	Del_1p22.1	1	1
KRAS	Del_3q13.31	1	1
KRAS	Del_5p15.31	1	1
KRAS	Del_5q12.1	1	1
KRAS	Del_5q31.3	1	1
KRAS	Del_8p23.3	1	1
KRAS	Del_9p23	1	1
KRAS	Del_12q23.3	1	1
KRAS	Del_13q34	1	1
KRAS	Del_14q23.3	1	1
KRAS	Del_16p13.3	1	1
KRAS	Del_19p13.3	1	1
KRT73	MAP2K1	1	1
KRT73	NGF	1	1
KRT73	RB1	1	1
KRT73	RIPK4	1	1
KRT73	RQCD1	1	1
KRT73	S100A8	1	1
KRT73	SLC27A5	1	1
KRT73	13q-Amp	1	1
KRT73	22q-Amp	1	1
KRT73	11p-Del	1	1
KRT73	11q-Del	1	1
KRT73	6p-Del	1	1
KRT73	Amp_3p13	1	1
KRT73	Amp_4q12	1	1
KRT73	Amp_6q12	1	1
KRT73	Amp_11q13.3	1	1
KRT73	Amp_12q14.1	1	1
KRT73	Amp_12q15	1	1
KRT73	Amp_13q31.3	1	1
KRT73	Del_2q37.3	1	1
KRT73	Del_3q13.31	1	1
KRT73	Del_8p23.3	1	1
KRT73	Del_Xp21.1	1	1
KRTAP5-10	NGF	1	1
KRTAP5-10	NUDT11	1	1
KRTAP5-10	PTPN11	1	1
KRTAP5-10	RB1	1	1
KRTAP5-10	RQCD1	1	1
KRTAP5-10	S100A8	1	1
KRTAP5-10	SLC27A5	1	1
KRTAP5-10	1q-Amp	1	1
KRTAP5-10	22q-Amp	1	1
KRTAP5-10	8p-Amp	1	1
KRTAP5-10	14q-Del	1	1
KRTAP5-10	5q-Del	1	1
KRTAP5-10	Amp_3p13	1	1
KRTAP5-10	Amp_11q13.3	1	1
KRTAP5-10	Amp_12q14.1	1	1
KRTAP5-10	Amp_12q15	1	1
KRTAP5-10	Amp_15q26.2	1	1
KRTAP5-10	Amp_17q25.3	1	1
KRTAP5-10	Amp_22q13.2	1	1
KRTAP5-10	Del_2q37.3	1	1
KRTAP5-10	Del_3q13.31	1	1
KRTAP5-10	Del_13q34	1	1
KRTAP5-10	Del_14q23.3	1	1
KRTAP5-10	Del_Xp21.1	1	1
KYNU	NUDT11	1	1
KYNU	PTEN	1	1
KYNU	PTPN11	1	1
KYNU	RB1	1	1
KYNU	RQCD1	1	1
KYNU	13q-Amp	1	1
KYNU	11p-Del	1	1
KYNU	18p-Del	1	1
KYNU	6p-Del	1	1
KYNU	Amp_3p13	1	1
KYNU	Amp_11q13.3	1	1
KYNU	Amp_13q31.3	1	1
KYNU	Amp_15q26.2	1	1
KYNU	Amp_17q25.3	1	1
KYNU	Del_3q13.31	1	1
KYNU	Del_8p23.3	1	1
KYNU	Del_Xp21.1	1	1
LGR6	NUDT11	1	1
LGR6	S100A8	1	1
LGR6	13q-Amp	1	1
LGR6	8p-Amp	1	1
LGR6	14q-Del	1	1
LGR6	6p-Del	1	1
LGR6	Amp_3p13	1	1
LGR6	Amp_4q12	1	1
LGR6	Amp_12q14.1	1	1
LGR6	Amp_12q15	1	1
LGR6	Amp_13q31.3	1	1
LGR6	Amp_15q26.2	1	1
LGR6	Del_1p36.31	1	1
LGR6	Del_1p22.1	1	1
LGR6	Del_4q34.3	1	1
LGR6	Del_12q23.3	1	1
LGR6	Del_14q23.3	1	1
LGR6	Del_15q13.3	1	1
LGR6	Del_15q21.1	1	1
LGR6	Del_19p13.3	1	1
LGR6	Del_Xp21.1	1	1
MAN1A1	MAP2K1	1	1
MAN1A1	NGF	1	1
MAN1A1	PTPN11	1	1
MAN1A1	S100A8	1	1
MAN1A1	ZFX	1	1
MAN1A1	13q-Amp	1	1
MAN1A1	20p-Amp	1	1
MAN1A1	22q-Amp	1	1
MAN1A1	16q-Del	1	1
MAN1A1	Amp_3p13	1	1
MAN1A1	Amp_4q12	1	1
MAN1A1	Amp_5p15.33	1	1
MAN1A1	Amp_6q12	1	1
MAN1A1	Amp_11q13.3	1	1
MAN1A1	Amp_12q14.1	1	1
MAN1A1	Amp_12q15	1	1
MAN1A1	Amp_13q31.3	1	1
MAN1A1	Amp_15q26.2	1	1
MAN1A1	Amp_22q13.2	1	1
MAN1A1	Del_1p36.31	1	1
MAN1A1	Del_1p22.1	1	1
MAN1A1	Del_2q37.3	1	1
MAN1A1	Del_4p16.3	1	1
MAN1A1	Del_5p15.31	1	1
MAN1A1	Del_12q23.3	1	1
MAN1A1	Del_16p13.3	1	1
MAN1A1	Del_16q12.1	1	1
MAN1A1	Del_16q23.1	1	1
MAN1A1	Del_16q24.3	1	1
MAN1A1	Del_Xp21.1	1	1
MAP2K1	NBPF1	1	1
MAP2K1	NF1	1	1
MAP2K1	OXA1L	1	1
MAP2K1	PDGFRA	1	1
MAP2K1	RB1	1	1
MAP2K1	RQCD1	1	1
MAP2K1	SYK	1	1
MAP2K1	ZNF780B	1	1
MAP2K1	20p-Amp	1	1
MAP2K1	20q-Amp	1	1
MAP2K1	14q-Del	1	1
MAP2K1	18p-Del	1	1
MAP2K1	6p-Del	1	1
MAP2K1	Amp_11q13.3	1	1
MAP2K1	Amp_12q14.1	1	1
MAP2K1	Amp_17q25.3	1	1
MAP2K1	Amp_20q13.33	1	1
MAP2K1	Del_2q37.3	1	1
MAP2K1	Del_3q13.31	1	1
MAP2K1	Del_4p16.3	1	1
MAP2K1	Del_14q23.3	1	1
MAP2K1	Del_19p13.3	1	1
MAP2K1	Del_Xp21.1	1	1
MLL	NUDT11	1	1
MLL	RQCD1	1	1
MLL	Del_Xp21.1	1	1
MPP7	RB1	1	1
MSTN	NUDT11	1	1
MSTN	PTEN	1	1
MSTN	PTPN11	1	1
MSTN	RIPK4	1	1
MSTN	RQCD1	1	1
MSTN	S100A8	1	1
MSTN	SLC27A5	1	1
MSTN	ZFX	1	1
MSTN	13q-Amp	1	1
MSTN	6p-Amp	1	1
MSTN	10p-Del	1	1
MSTN	10q-Del	1	1
MSTN	14q-Del	1	1
MSTN	Amp_3p13	1	1
MSTN	Amp_5p15.33	1	1
MSTN	Amp_6p24.3	1	1
MSTN	Amp_11q13.3	1	1
MSTN	Amp_12q14.1	1	1
MSTN	Amp_12q15	1	1
MSTN	Amp_13q31.3	1	1
MSTN	Amp_15q26.2	1	1
MSTN	Del_1p36.31	1	1
MSTN	Del_2q37.3	1	1
MSTN	Del_3q13.31	1	1
MSTN	Del_10p15.3	1	1
MSTN	Del_10q21.1	1	1
MSTN	Del_10q26.3	1	1
MSTN	Del_14q23.3	1	1
MSTN	Del_15q21.1	1	1
MSTN	Del_16p13.3	1	1
MSTN	Del_Xp21.1	1	1
MYO16	Del_1p22.1	1	1
MYO16	Del_3q13.31	1	1
MYO16	Del_Xp21.1	1	1
MYO3B	NUDT11	1	1
MYO3B	RQCD1	1	1
MYO3B	22q-Amp	1	1
MYO3B	6p-Del	1	1
MYO3B	Amp_5p15.33	1	1
MYO3B	Amp_11q13.3	1	1
MYO3B	Del_5p15.31	1	1
MYO3B	Del_Xp21.1	1	1
NAP1L2	NUDT11	1	1
NAP1L2	RQCD1	1	1
NAP1L2	SLC27A5	1	1
NAP1L2	20p-Amp	1	1
NAP1L2	14q-Del	1	1
NAP1L2	Amp_12q14.1	1	1
NAP1L2	Amp_12q15	1	1
NAP1L2	Del_3q13.31	1	1
NAP1L2	Del_5p15.31	1	1
NAP1L2	Del_13q34	1	1
NAP1L2	Del_14q23.3	1	1
NAP1L2	Del_16p13.3	1	1
NAP1L2	Del_Xp21.1	1	1
NBPF1	NUDT11	1	1
NBPF1	18p-Del	1	1
NBPF1	6p-Del	1	1
NBPF1	Del_Xp21.1	1	1
NF1	NUDT11	1	1
NF1	Amp_4q12	1	1
NF1	Amp_11q13.3	1	1
NF1	Del_Xp21.1	1	1
NGF	NUDT11	1	1
NGF	NUP214	1	1
NGF	PPP6C	1	1
NGF	PTPN11	1	1
NGF	RQCD1	1	1
NGF	SLC27A5	1	1
NGF	USP9X	1	1
NGF	ZNF780B	1	1
NGF	8p-Amp	1	1
NGF	16q-Del	1	1
NGF	18p-Del	1	1
NGF	5q-Del	1	1
NGF	6p-Del	1	1
NGF	Amp_3p13	1	1
NGF	Amp_4q12	1	1
NGF	Del_1p22.1	1	1
NGF	Del_3q13.31	1	1
NGF	Del_4q34.3	1	1
NGF	Del_5q12.1	1	1
NGF	Del_15q13.3	1	1
NGF	Del_15q21.1	1	1
NGF	Del_16p13.3	1	1
NGF	Del_16q23.1	1	1
NGF	Del_19p13.3	1	1
NGF	Del_Xp21.1	1	1
NRAS	OXA1L	1	1
NRAS	Amp_7q34	1	1
NUDT11	OR4S2	1	1
NUDT11	OR6C74	1	1
NUDT11	OXA1L	1	1
NUDT11	PARM1	1	1
NUDT11	POTEG	1	1
NUDT11	PTEN	1	1
NUDT11	PTPN11	1	1
NUDT11	RB1	1	1
NUDT11	RIPK4	1	1
NUDT11	RPTN	1	1
NUDT11	RQCD1	1	1
NUDT11	S100A8	1	1
NUDT11	SELP	1	1
NUDT11	STK19	1	1
NUDT11	TP63	1	1
NUDT11	TRERF1	1	1
NUDT11	USP9X	1	1
NUDT11	ZFX	1	1
NUDT11	20p-Amp	1	1
NUDT11	6p-Amp	1	1
NUDT11	7p-Amp	1	1
NUDT11	8p-Amp	1	1
NUDT11	14q-Del	1	1
NUDT11	17p-Del	1	1
NUDT11	18p-Del	1	1
NUDT11	Amp_4q12	1	1
NUDT11	Amp_6q12	1	1
NUDT11	Amp_7p22.1	1	1
NUDT11	Amp_12q14.1	1	1
NUDT11	Amp_12q15	1	1
NUDT11	Del_1p36.31	1	1
NUDT11	Del_10p15.3	1	1
NUDT11	Del_14q23.3	1	1
NUDT11	Del_19p13.3	1	1
NUP214	RB1	1	1
NUP214	13q-Amp	1	1
NUP214	20p-Amp	1	1
NUP214	6p-Amp	1	1
NUP214	8p-Amp	1	1
NUP214	8q-Amp	1	1
NUP214	10p-Del	1	1
NUP214	11p-Del	1	1
NUP214	11q-Del	1	1
NUP214	14q-Del	1	1
NUP214	18p-Del	1	1
NUP214	6p-Del	1	1
NUP214	Amp_6q12	1	1
NUP214	Amp_13q31.3	1	1
NUP214	Amp_15q26.2	1	1
NUP214	Del_1p22.1	1	1
NUP214	Del_2q37.3	1	1
NUP214	Del_5p15.31	1	1
NUP214	Del_14q23.3	1	1
NUP214	Del_16p13.3	1	1
NUP214	Del_19p13.3	1	1
NUP214	Del_Xp21.1	1	1
OR4S2	RB1	1	1
OR4S2	SLC27A5	1	1
OR4S2	6p-Del	1	1
OR4S2	Amp_6q12	1	1
OR4S2	Amp_12q14.1	1	1
OR4S2	Amp_15q26.2	1	1
OR4S2	Del_1p36.31	1	1
OR4S2	Del_2q37.3	1	1
OR4S2	Del_16p13.3	1	1
OR4S2	Del_Xp21.1	1	1
OR6C74	PTPN11	1	1
OR6C74	RAC1	1	1
OR6C74	S100A8	1	1
OR6C74	SLC27A5	1	1
OR6C74	6p-Amp	1	1
OR6C74	11q-Del	1	1
OR6C74	18p-Del	1	1
OR6C74	6p-Del	1	1
OR6C74	Del_3q13.31	1	1
OR6C74	Del_4q34.3	1	1
OR6C74	Del_Xp21.1	1	1
OXA1L	RB1	1	1
OXA1L	RIPK4	1	1
OXA1L	RQCD1	1	1
OXA1L	S100A8	1	1
OXA1L	ZFX	1	1
OXA1L	20p-Amp	1	1
OXA1L	22q-Amp	1	1
OXA1L	16q-Del	1	1
OXA1L	18p-Del	1	1
OXA1L	5q-Del	1	1
OXA1L	6p-Del	1	1
OXA1L	Amp_3p13	1	1
OXA1L	Amp_4q12	1	1
OXA1L	Amp_5p15.33	1	1
OXA1L	Amp_11q13.3	1	1
OXA1L	Amp_15q26.2	1	1
OXA1L	Del_1p22.1	1	1
OXA1L	Del_3q13.31	1	1
OXA1L	Del_5p15.31	1	1
OXA1L	Del_5q12.1	1	1
OXA1L	Del_5q31.3	1	1
OXA1L	Del_15q13.3	1	1
OXA1L	Del_15q21.1	1	1
OXA1L	Del_16p13.3	1	1
OXA1L	Del_16q23.1	1	1
OXA1L	Del_16q24.3	1	1
OXA1L	Del_19p13.3	1	1
OXA1L	Del_Xp21.1	1	1
PARM1	PTPN11	1	1
PARM1	RB1	1	1
PARM1	ZFX	1	1
PARM1	13q-Amp	1	1
PARM1	22q-Amp	1	1
PARM1	6p-Del	1	1
PARM1	Amp_3p13	1	1
PARM1	Amp_5p15.33	1	1
PARM1	Amp_11q13.3	1	1
PARM1	Amp_13q31.3	1	1
PARM1	Amp_22q13.2	1	1
PARM1	Del_3q13.31	1	1
PARM1	Del_13q34	1	1
PARM1	Del_Xp21.1	1	1
PDGFRA	RQCD1	1	1
PDGFRA	Del_Xp21.1	1	1
POTEG	RB1	1	1
POTEG	Amp_11q13.3	1	1
POTEG	Amp_12q15	1	1
POTEG	Del_3q13.31	1	1
POTEG	Del_5p15.31	1	1
POTEG	Del_16p13.3	1	1
POTEG	Del_Xp21.1	1	1
PPP6C	PTPN11	1	1
PPP6C	S100A8	1	1
PPP6C	20p-Amp	1	1
PPP6C	20q-Amp	1	1
PPP6C	18p-Del	1	1
PPP6C	Amp_6q12	1	1
PPP6C	Amp_11q13.3	1	1
PPP6C	Amp_12q14.1	1	1
PPP6C	Amp_20q13.33	1	1
PPP6C	Del_1p36.31	1	1
PPP6C	Del_1p22.1	1	1
PPP6C	Del_2q37.3	1	1
PPP6C	Del_3q13.31	1	1
PPP6C	Del_5p15.31	1	1
PPP6C	Del_Xp21.1	1	1
PTEN	PTPN11	1	1
PTEN	S100A8	1	1
PTEN	SYK	1	1
PTEN	TRERF1	1	1
PTEN	ZNF780B	1	1
PTEN	Amp_4q12	1	1
PTEN	Amp_11q13.3	1	1
PTEN	Del_Xp21.1	1	1
PTPN11	PTPN22	1	1
PTPN11	RB1	1	1
PTPN11	20p-Amp	1	1
PTPN11	20q-Amp	1	1
PTPN11	22q-Amp	1	1
PTPN11	10p-Del	1	1
PTPN11	11p-Del	1	1
PTPN11	18p-Del	1	1
PTPN11	5q-Del	1	1
PTPN11	6p-Del	1	1
PTPN11	6q-Del	1	1
PTPN11	Amp_3p13	1	1
PTPN11	Amp_4q12	1	1
PTPN11	Amp_6q12	1	1
PTPN11	Amp_11q13.3	1	1
PTPN11	Amp_12q14.1	1	1
PTPN11	Amp_12q15	1	1
PTPN11	Amp_15q26.2	1	1
PTPN11	Amp_20q13.33	1	1
PTPN11	Amp_22q13.2	1	1
PTPN11	Del_1p22.1	1	1
PTPN11	Del_3q13.31	1	1
PTPN11	Del_4p16.3	1	1
PTPN11	Del_5p15.31	1	1
PTPN11	Del_5q12.1	1	1
PTPN11	Del_6q21	1	1
PTPN11	Del_6q26	1	1
PTPN11	Del_10p15.3	1	1
PTPN11	Del_12q23.3	1	1
PTPN11	Del_13q34	1	1
PTPN11	Del_16p13.3	1	1
PTPN11	Del_19p13.3	1	1
PTPN11	Del_Xp21.1	1	1
PTPN22	RB1	1	1
PTPN22	14q-Del	1	1
PTPN22	Amp_12q14.1	1	1
PTPN22	Del_3q13.31	1	1
PTPN22	Del_8p23.3	1	1
PTPN22	Del_14q23.3	1	1
PTPN22	Del_16p13.3	1	1
PTPN22	Del_Xp21.1	1	1
RAC1	RB1	1	1
RAC1	SLC27A5	1	1
RAC1	ZNF780B	1	1
RAC1	13q-Amp	1	1
RAC1	14q-Del	1	1
RAC1	6p-Del	1	1
RAC1	Amp_6q12	1	1
RAC1	Amp_13q31.3	1	1
RAC1	Del_3q13.31	1	1
RAC1	Del_5p15.31	1	1
RAC1	Del_14q23.3	1	1
RAC1	Del_Xp21.1	1	1
RB1	RIPK4	1	1
RB1	S100A8	1	1
RB1	SELP	1	1
RB1	SLC27A5	1	1
RB1	SLC9A11	1	1
RB1	STK19	1	1
RB1	SYK	1	1
RB1	USP17L2	1	1
RB1	ZFX	1	1
RB1	ZNF780B	1	1
RB1	22q-Amp	1	1
RB1	9q-Del	1	1
RB1	Amp_3p13	1	1
RB1	Amp_4q12	1	1
RB1	Amp_11q13.3	1	1
RB1	Amp_12q14.1	1	1
RB1	Amp_12q15	1	1
RB1	Amp_15q26.2	1	1
RB1	Del_1p22.1	1	1
RB1	Del_3q13.31	1	1
RB1	Del_5p15.31	1	1
RB1	Del_13q34	1	1
RB1	Del_Xp21.1	1	1
RELN	Del_Xp21.1	1	1
RIPK4	SLC27A5	1	1
RIPK4	20p-Amp	1	1
RIPK4	20q-Amp	1	1
RIPK4	6p-Amp	1	1
RIPK4	18p-Del	1	1
RIPK4	Amp_6q12	1	1
RIPK4	Amp_11q13.3	1	1
RIPK4	Amp_12q14.1	1	1
RIPK4	Amp_20q13.33	1	1
RIPK4	Del_1p36.31	1	1
RIPK4	Del_1p22.1	1	1
RIPK4	Del_3q13.31	1	1
RIPK4	Del_16p13.3	1	1
RIPK4	Del_19p13.3	1	1
RIPK4	Del_Xp21.1	1	1
RPTN	Amp_12q14.1	1	1
RPTN	Del_Xp21.1	1	1
RQCD1	S100A8	1	1
RQCD1	SELP	1	1
RQCD1	SLC27A5	1	1
RQCD1	SLC38A4	1	1
RQCD1	SYK	1	1
RQCD1	TRERF1	1	1
RQCD1	ZFX	1	1
RQCD1	ZNF780B	1	1
RQCD1	13q-Amp	1	1
RQCD1	14q-Del	1	1
RQCD1	18p-Del	1	1
RQCD1	6p-Del	1	1
RQCD1	Amp_4q12	1	1
RQCD1	Amp_6q12	1	1
RQCD1	Amp_11q13.3	1	1
RQCD1	Amp_12q14.1	1	1
RQCD1	Amp_13q31.3	1	1
RQCD1	Amp_15q26.2	1	1
RQCD1	Del_1p36.31	1	1
RQCD1	Del_1p22.1	1	1
RQCD1	Del_2q37.3	1	1
RQCD1	Del_3q13.31	1	1
RQCD1	Del_5p15.31	1	1
RQCD1	Del_14q23.3	1	1
RQCD1	Del_Xp21.1	1	1
S100A8	SLC27A5	1	1
S100A8	USP9X	1	1
S100A8	13q-Amp	1	1
S100A8	8p-Amp	1	1
S100A8	8q-Amp	1	1
S100A8	14q-Del	1	1
S100A8	16q-Del	1	1
S100A8	5q-Del	1	1
S100A8	6p-Del	1	1
S100A8	Amp_1p12	1	1
S100A8	Amp_3p13	1	1
S100A8	Amp_4q12	1	1
S100A8	Amp_5p15.33	1	1
S100A8	Amp_6q12	1	1
S100A8	Amp_12q14.1	1	1
S100A8	Amp_12q15	1	1
S100A8	Amp_13q31.3	1	1
S100A8	Amp_15q26.2	1	1
S100A8	Del_1p22.1	1	1
S100A8	Del_3q13.31	1	1
S100A8	Del_4q34.3	1	1
S100A8	Del_5p15.31	1	1
S100A8	Del_5q12.1	1	1
S100A8	Del_5q31.3	1	1
S100A8	Del_8p23.3	1	1
S100A8	Del_12q23.3	1	1
S100A8	Del_14q23.3	1	1
S100A8	Del_15q13.3	1	1
S100A8	Del_15q21.1	1	1
S100A8	Del_16p13.3	1	1
S100A8	Del_16q12.1	1	1
S100A8	Del_19p13.3	1	1
S100A8	Del_Xp21.1	1	1
SELP	Amp_12q15	1	1
SELP	Del_Xp21.1	1	1
SLC27A5	SYK	1	1
SLC27A5	USP17L2	1	1
SLC27A5	20p-Amp	1	1
SLC27A5	8p-Amp	1	1
SLC27A5	8q-Amp	1	1
SLC27A5	Amp_3p13	1	1
SLC27A5	Amp_6q12	1	1
SLC27A5	Amp_11q13.3	1	1
SLC27A5	Amp_12q14.1	1	1
SLC27A5	Amp_15q26.2	1	1
SLC27A5	Del_1p22.1	1	1
SLC27A5	Del_4p16.3	1	1
SLC27A5	Del_19p13.3	1	1
SLC27A5	Del_Xp21.1	1	1
SLC38A4	18p-Del	1	1
SLC38A4	Amp_4q12	1	1
SLC38A4	Amp_15q26.2	1	1
SLC38A4	Del_3q13.31	1	1
SLC38A4	Del_16p13.3	1	1
SLC38A4	Del_19p13.3	1	1
SLC38A4	Del_Xp21.1	1	1
STK19	20p-Amp	1	1
STK19	22q-Amp	1	1
STK19	14q-Del	1	1
STK19	18p-Del	1	1
STK19	6p-Del	1	1
STK19	Amp_6q12	1	1
STK19	Amp_12q14.1	1	1
STK19	Amp_15q26.2	1	1
STK19	Amp_20q13.33	1	1
STK19	Amp_22q13.2	1	1
STK19	Del_1p36.31	1	1
STK19	Del_3q13.31	1	1
STK19	Del_14q23.3	1	1
STK19	Del_Xp21.1	1	1
SYK	20p-Amp	1	1
SYK	Amp_3p13	1	1
TP53	Amp_12q14.1	1	1
TP53	Del_1p36.31	1	1
TP53	Del_Xp21.1	1	1
TP63	6p-Del	1	1
TP63	Amp_6q12	1	1
TP63	Del_Xp21.1	1	1
TPTE	Amp_11q13.3	1	1
TRERF1	20p-Amp	1	1
TRERF1	20q-Amp	1	1
TRERF1	6p-Del	1	1
TRERF1	Amp_6q12	1	1
TRERF1	Amp_12q14.1	1	1
TRERF1	Amp_12q15	1	1
TRERF1	Del_Xp21.1	1	1
USH2A	Del_Xp21.1	1	1
USP17L2	13q-Amp	1	1
USP17L2	20p-Amp	1	1
USP17L2	20q-Amp	1	1
USP17L2	6p-Del	1	1
USP17L2	Amp_12q14.1	1	1
USP17L2	Amp_13q31.3	1	1
USP17L2	Amp_17q25.3	1	1
USP17L2	Amp_20q13.33	1	1
USP17L2	Del_1p36.31	1	1
USP17L2	Del_3q13.31	1	1
USP17L2	Del_Xp21.1	1	1
USP9X	6p-Del	1	1
USP9X	Del_1p22.1	1	1
USP9X	Del_5p15.31	1	1
USP9X	Del_16p13.3	1	1
USP9X	Del_19p13.3	1	1
USP9X	Del_Xp21.1	1	1
ZFX	20p-Amp	1	1
ZFX	8p-Amp	1	1
ZFX	14q-Del	1	1
ZFX	18p-Del	1	1
ZFX	6p-Del	1	1
ZFX	Amp_3p13	1	1
ZFX	Amp_4q12	1	1
ZFX	Amp_11q13.3	1	1
ZFX	Amp_12q15	1	1
ZFX	Amp_15q26.2	1	1
ZFX	Amp_17q25.3	1	1
ZFX	Del_12q23.3	1	1
ZFX	Del_13q34	1	1
ZFX	Del_14q23.3	1	1
ZFX	Del_16p13.3	1	1
ZFX	Del_19p13.3	1	1
ZFX	Del_Xp21.1	1	1
ZNF780B	13q-Amp	1	1
ZNF780B	10p-Del	1	1
ZNF780B	5q-Del	1	1
ZNF780B	6p-Del	1	1
ZNF780B	Amp_1p12	1	1
ZNF780B	Amp_1q21.3	1	1
ZNF780B	Amp_3p13	1	1
ZNF780B	Amp_4q12	1	1
ZNF780B	Amp_12q14.1	1	1
ZNF780B	Amp_12q15	1	1
ZNF780B	Amp_13q31.3	1	1
ZNF780B	Amp_15q26.2	1	1
ZNF780B	Del_2q37.3	1	1
ZNF780B	Del_5p15.31	1	1
ZNF780B	Del_5q31.3	1	1
ZNF780B	Del_10p15.3	1	1
ZNF780B	Del_12q23.3	1	1
ZNF780B	Del_16p13.3	1	1
ZNF780B	Del_Xp21.1	1	1
13q-Amp	Amp_4q12	1	1
13q-Amp	Amp_12q15	1	1
13q-Amp	Del_13q34	1	1
13q-Amp	Del_Xp21.1	1	1
1q-Amp	Del_Xp21.1	1	1
20p-Amp	Del_16q12.1	1	1
22q-Amp	6p-Del	1	1
22q-Amp	Amp_12q14.1	1	1
22q-Amp	Del_5q12.1	1	1
22q-Amp	Del_12q23.3	1	1
22q-Amp	Del_Xp21.1	1	1
6p-Amp	6p-Del	1	1
6p-Amp	Del_Xp21.1	1	1
8p-Amp	Del_13q34	1	1
8p-Amp	Del_Xp21.1	1	1
8q-Amp	Del_Xp21.1	1	1
11q-Del	Del_Xp21.1	1	1
14q-Del	Amp_15q26.2	1	1
17p-Del	Amp_6q12	1	1
17p-Del	Amp_12q14.1	1	1
18p-Del	Del_Xp21.1	1	1
5q-Del	Amp_11q13.3	1	1
6p-Del	Amp_15q26.2	1	1
6p-Del	Del_Xp21.1	1	1
Amp_1p12	Del_Xp21.1	1	1
Amp_1q21.3	Del_Xp21.1	1	1
Amp_1q44	Del_Xp21.1	1	1
Amp_3p13	Del_1p36.31	1	1
Amp_4q12	Amp_13q31.3	1	1
Amp_4q12	Del_5p15.31	1	1
Amp_4q12	Del_Xp21.1	1	1
Amp_6q12	Del_1p22.1	1	1
Amp_6q12	Del_16p13.3	1	1
Amp_6q12	Del_Xp21.1	1	1
Amp_7p22.1	Del_Xp21.1	1	1
Amp_8q24.21	Del_Xp21.1	1	1
Amp_11q13.3	Del_3q13.31	1	1
Amp_11q13.3	Del_5q12.1	1	1
Amp_11q13.3	Del_Xp21.1	1	1
Amp_12q14.1	Amp_15q26.2	1	1
Amp_12q14.1	Del_Xp21.1	1	1
Amp_12q15	Amp_13q31.3	1	1
Amp_12q15	Amp_15q26.2	1	1
Amp_12q15	Del_Xp21.1	1	1
Amp_13q31.3	Del_Xp21.1	1	1
Amp_15q26.2	Del_Xp21.1	1	1
Del_1p36.31	Del_Xp21.1	1	1
Del_2q37.3	Del_Xp21.1	1	1
Del_13q34	Del_Xp21.1	1	1
Del_19p13.3	Del_Xp21.1	1	1
Del_9p23	Del_10q26.3	1.01e-13	1
DSG3	KCND2	1.02e-05	1
11p-Del	Del_6q26	1.04e-05	1
Del_1p36.31	Del_2q37.3	1.04e-05	1
8q-Amp	Amp_6p24.3	1.05e-06	1
18p-Del	9p-Del	1.06e-06	1
ALPK2	COL3A1	1.07e-06	1
9q-Del	Del_10q23.31	1.07e-08	1
Del_6q26	Del_11q23.3	1.08e-06	1
Del_15q13.3	Del_15q21.1	1.08e-23	1
6p-Del	Del_6q26	1.11e-05	1
Del_10p15.3	Del_14q23.3	1.11e-06	1
COL3A1	MPP7	1.12e-05	1
CNTN5	TTN	1.13e-06	1
CAMTA1	RELN	1.14e-05	1
Amp_1p12	Amp_1q44	1.14e-05	1
DCLK3	XIRP2	1.14e-06	1
EPHA6	THSD7B	1.14e-08	1
CYP3A4	DCLK3	1.15e-05	1
14q-Del	Del_10p15.3	1.15e-07	1
Del_5q12.1	Del_9p23	1.15e-09	1
14q-Del	Del_9p23	1.16e-07	1
Amp_12q14.1	Amp_12q15	1.16e-10	1
NF1	SLC9A11	1.18e-05	1
6q-Del	Del_10q26.3	1.18e-05	1
10p-Del	Del_10q23.31	1.1e-35	1
CAMTA1	SELP	1.21e-06	1
20p-Amp	Amp_20q13.33	1.21e-25	1
10q-Del	Del_10q26.3	1.22e-56	1
9p-Del	Del_14q23.3	1.23e-06	1
Del_5q31.3	Del_9p23	1.25e-08	1
MYO3B	USH2A	1.27e-05	1
10q-Del	9q-Del	1.2e-09	1
5q-Del	Del_5q31.3	1.2e-23	1
Del_10q23.31	Del_10q26.3	1.2e-52	1
COL3A1	RPTN	1.32e-05	1
10p-Del	9p-Del	1.32e-10	1
Del_16p13.3	Del_16q12.1	1.32e-11	1
14q-Del	9p-Del	1.34e-05	1
Del_1p36.31	Del_1p22.1	1.34e-05	1
Del_4p16.3	Del_4q34.3	1.34e-05	1
FLT1	TPTE	1.36e-05	1
6q-Del	Del_14q23.3	1.36e-05	1
CTNNA3	SLC38A4	1.38e-05	1
11q-Del	Del_6q21	1.38e-05	1
Del_9p21.3	Del_10q23.31	1.38e-09	1
Del_5q31.3	Del_10q26.3	1.39e-05	1
16q-Del	Del_16p13.3	1.3e-11	1
10q-Del	Del_9p23	1.3e-14	1
9p-Del	Del_6q21	1.45e-07	1
Amp_1q21.3	Amp_1q44	1.46e-37	1
EPHA6	MYO3B	1.47e-05	1
10q-Del	Del_9p21.3	1.47e-09	1
8p-Amp	8q-Amp	1.48e-23	1
CAMTA1	USH2A	1.49e-05	1
BRAF	Amp_7q34	1.4e-07	1
Del_1p22.1	Del_10q26.3	1.51e-05	1
Del_16q23.1	Del_16q24.3	1.51e-38	1
ALPK2	TTN	1.53e-06	1
Del_10q26.3	Del_15q21.1	1.54e-05	1
6q-Del	9p-Del	1.56e-09	1
8q-Amp	Amp_8q24.21	1.56e-35	1
11q-Del	Del_9p23	1.57e-08	1
9p-Del	Del_6q26	1.58e-08	1
20p-Amp	20q-Amp	1.5e-28	1
NF1	TP63	1.61e-05	1
Del_10p15.3	Del_10q23.31	1.62e-26	1
TPTE	XIRP2	1.65e-06	1
EPHA7	USH2A	1.67e-06	1
10p-Del	Del_9p23	1.69e-11	1
Del_6q26	Del_10q21.1	1.6e-06	1
Del_10p15.3	Del_10q21.1	1.6e-30	1
Del_6q21	Del_6q26	1.6e-61	1
ANO4	COL3A1	1.72e-05	1
14q-Del	6q-Del	1.73e-05	1
10p-Del	Del_10p15.3	1.74e-47	1
Del_6q26	Del_10q23.31	1.75e-06	1
9p-Del	Del_5q31.3	1.75e-08	1
20q-Amp	Amp_20q13.33	1.76e-36	1
KCND2	NF1	1.77e-05	1
Del_6q26	Del_9p23	1.78e-08	1
CAMTA1	THSD7B	1.79e-05	1
DCLK3	PDGFRA	1.79e-05	1
DCLK3	THSD7B	1.7e-05	1
KEL	XIRP2	1.7e-05	1
10q-Del	6q-Del	1.7e-05	1
Del_9p23	Del_14q23.3	1.7e-08	1
DCLK3	TP63	1.82e-06	1
10q-Del	Del_10p15.3	1.82e-30	1
EPHA6	TTN	1.83e-05	1
22q-Amp	Amp_22q13.2	1.84e-23	1
6q-Del	Del_5q31.3	1.85e-05	1
COL3A1	XIRP2	1.89e-09	1
Del_16q12.1	Del_16q23.1	1.8e-30	1
11q-Del	Del_9p21.3	1.92e-07	1
SELP	XIRP2	1.93e-07	1
ANO4	XIRP2	1.95e-06	1
RPTN	USH2A	1.96e-06	1
TP53	17p-Del	1.99e-05	1
16q-Del	Del_16q23.1	1.99e-33	1
7p-Amp	Del_9p21.3	1e-04	1
6q-Del	Del_9p23	1e-08	1
14q-Del	Del_14q23.3	1e-41	1
DCLK3	USH2A	2.03e-06	1
Del_9p23	Del_12q23.3	2.04e-07	1
Del_6q21	Del_14q23.3	2.05e-06	1
Del_12q23.3	Del_14q23.3	2.06e-06	1
EPHA6	EPHA7	2.07e-05	1
EPHA6	SELP	2.07e-05	1
6q-Del	9q-Del	2.09e-05	1
SELP	THSD7B	2.12e-06	1
5q-Del	Del_9p23	2.15e-05	1
10p-Del	Del_10q26.3	2.16e-33	1
DCLK3	NF1	2.17e-08	1
ALPK2	FLT1	2.18e-06	1
EPHA6	TPTE	2.21e-05	1
THSD7B	XIRP2	2.21e-06	1
9q-Del	Del_5q12.1	2.22e-05	1
Del_6q21	Del_9p21.3	2.23e-08	1
9p-Del	Del_12q23.3	2.24e-05	1
Amp_1q21.3	Amp_7p22.1	2.24e-05	1
Del_9p21.3	Del_14q23.3	2.24e-07	1
11q-Del	Del_11q23.3	2.24e-31	1
EPHA7	XIRP2	2.26e-09	1
KCND2	TPTE	2.29e-05	1
9q-Del	Del_5q31.3	2.2e-10	1
6q-Del	Del_11q23.3	2.31e-06	1
14q-Del	Del_12q23.3	2.33e-05	1
TPTE	USH2A	2.38e-08	1
9p-Del	Del_9p23	2.39e-57	1
Del_9p21.3	Del_11q23.3	2.3e-08	1
10p-Del	Del_11q23.3	2.42e-05	1
10q-Del	Del_1p22.1	2.42e-05	1
ALPK2	SLC9A11	2.42e-06	1
COL3A1	TTN	2.42e-07	1
11p-Del	9p-Del	2.4e-07	1
18p-Del	9q-Del	2.52e-05	1
EPHA6	PDGFRA	2.53e-07	1
ALPK2	USH2A	2.54e-06	1
MYO3B	RPTN	2.59e-05	1
10q-Del	Del_6q26	2.59e-07	1
EPHA7	RPTN	2.5e-05	1
11p-Del	Del_9p21.3	2.5e-06	1
Del_5q31.3	Del_10p15.3	2.63e-05	1
7q-Amp	Amp_7q34	2.63e-37	1
9p-Del	Del_1p22.1	2.71e-05	1
11p-Del	11q-Del	2.71e-30	1
FRMPD4	RIPK4	2.73e-05	1
EPHA6	KEL	2.75e-06	1
14q-Del	Del_6q26	2.75e-06	1
10p-Del	10q-Del	2.75e-46	1
EPHA7	FLT1	2.76e-06	1
FGFR2	MSTN	2.76e-06	1
13q-Amp	Amp_6p24.3	2.77e-05	1
EPHA6	MAN1A1	2.78e-05	1
BRAF	7q-Amp	2.87e-05	1
Del_6q26	Del_9p21.3	2.87e-09	1
10q-Del	Del_10q21.1	2.92e-63	1
9q-Del	Del_10p15.3	2.94e-05	1
Del_10q26.3	Del_16p13.3	2.94e-06	1
7p-Amp	Amp_7p22.1	2.94e-38	1
7p-Amp	Amp_7q34	2.95e-25	1
Amp_7p22.1	Amp_7q34	2.96e-15	1
Amp_6p24.3	Amp_8q24.21	2.98e-06	1
FRMPD4	TPTE	2e-04	1
Del_6q26	Del_10p15.3	3.05e-08	1
ANO4	FGFR2	3.06e-05	1
9p-Del	9q-Del	3.06e-30	1
TTN	XIRP2	3.14e-08	1
EPHA7	THSD7B	3.15e-07	1
Del_9p23	Del_10p15.3	3.19e-12	1
BTK	RPTN	3.23e-05	1
FLT1	XIRP2	3.23e-06	1
EPHA7	TPTE	3.23e-07	1
5q-Del	9q-Del	3.25e-05	1
TPTE	TTN	3.2e-06	1
ANO4	EPHA6	3.32e-07	1
6p-Amp	Amp_6p24.3	3.37e-25	1
6p-Del	Del_6q21	3.42e-07	1
DCLK3	EPHA7	3.48e-06	1
ARID2	XIRP2	3.49e-05	1
Del_6q21	Del_10q23.31	3.49e-05	1
10p-Del	Del_1p22.1	3.54e-05	1
6q-Del	Del_9p21.3	3.56e-09	1
CTNNA3	KRT73	3.5e-05	1
6q-Del	Del_6q26	3.63e-35	1
6p-Del	6q-Del	3.65e-12	1
ALPK2	CPA3	3.69e-05	1
COL3A1	TPTE	3.6e-06	1
TP63	USH2A	3.8e-06	1
TTN	USH2A	3.91e-05	1
6p-Amp	8q-Amp	3.93e-05	1
Del_10q21.1	Del_16p13.3	3.93e-05	1
8p-Amp	Amp_6p24.3	3.94e-05	1
11p-Del	Del_6q21	3.95e-05	1
Del_9p23	Del_9p21.3	3.95e-50	1
ALPK2	XIRP2	3.96e-06	1
NF1	TPTE	3.9e-05	1
ANO4	NF1	4.01e-06	1
Del_5q12.1	Del_9p21.3	4.06e-06	1
EPHA7	NF1	4.08e-05	1
9p-Del	Del_5q12.1	4.11e-07	1
MYO3B	PDGFRA	4.17e-06	1
ALPK2	EPHA7	4.19e-07	1
CAMTA1	SLC9A11	4.24e-05	1
NAP1L2	SLC9A11	4.24e-05	1
9q-Del	Del_10q26.3	4.24e-09	1
KEL	THSD7B	4.26e-06	1
RELN	SELP	4.27e-05	1
9q-Del	Del_9p21.3	4.28e-14	1
18p-Del	Del_10q23.31	4.29e-05	1
SLC9A11	XIRP2	4.2e-07	1
THSD7B	USH2A	4.35e-05	1
Del_10q23.31	Del_16p13.3	4.35e-05	1
EPHA6	SLC9A11	4.35e-06	1
Del_12q23.3	Del_15q13.3	4.37e-05	1
DCLK3	EPHA6	4.38e-06	1
1q-Amp	Amp_1q44	4.38e-35	1
Del_5p15.31	Del_5q31.3	4.41e-05	1
Del_9p21.3	Del_10p15.3	4.42e-09	1
5q-Del	Del_5p15.31	4.44e-07	1
KCND2	KRT73	4.45e-05	1
18p-Del	Del_9p23	4.45e-06	1
11q-Del	6q-Del	4.46e-05	1
USH2A	XIRP2	4.48e-09	1
EPHA7	SELP	4.49e-05	1
Del_1p22.1	Del_10q21.1	4.4e-06	1
16q-Del	Del_16q12.1	4.53e-29	1
C15orf23	SLC38A4	4.5e-05	1
EPHA7	PARM1	4.5e-05	1
Del_6q21	Del_10q26.3	4.63e-06	1
9q-Del	Del_6q26	4.63e-07	1
COL3A1	RIPK4	4.64e-05	1
EPHA6	RPTN	4.66e-05	1
Del_5q31.3	Del_10q21.1	4.68e-05	1
RPTN	XIRP2	4.6e-07	1
RPTN	THSD7B	4.74e-07	1
COL3A1	THSD7B	4.75e-05	1
14q-Del	Del_9p21.3	4.75e-07	1
SELP	SLC9A11	4.7e-05	1
11p-Del	Del_10p15.3	4.84e-05	1
RPTN	SELP	4.84e-07	1
Del_10q21.1	Del_10q23.31	4.84e-51	1
ANO4	DCLK3	4.88e-08	1
SELP	TP63	4.89e-05	1
MYO3B	XIRP2	4.91e-05	1
ARID2	RPTN	4.95e-07	1
9p-Del	Del_11q23.3	4.95e-09	1
10q-Del	9p-Del	4.95e-12	1
KCND2	NAP1L2	4.97e-05	1
14q-Del	Del_6q21	4e-06	1
SELP	USH2A	5.01e-05	1
ARID2	SELP	5.03e-07	1
TP63	TTN	5.04e-07	1
CTNNA3	EPHA4	5.11e-05	1
Amp_1p12	Amp_1q21.3	5.11e-07	1
Del_9p23	Del_10q21.1	5.17e-13	1
NF1	XIRP2	5.19e-07	1
POTEG	XIRP2	5.1e-05	1
MLL	USH2A	5.25e-05	1
Del_6q21	Del_10q21.1	5.2e-05	1
Del_5q31.3	Del_9p21.3	5.34e-05	1
Del_1p36.31	Del_9p23	5.37e-05	1
Del_12q23.3	Del_16p13.3	5.38e-06	1
9p-Del	Del_10q23.31	5.41e-11	1
BRAF	7p-Amp	5.48e-05	1
ALPK2	EPHA6	5.49e-07	1
11p-Del	Del_9p23	5.49e-08	1
ANO4	KEL	5.55e-05	1
Del_10q21.1	Del_10q26.3	5.58e-48	1
DDX3X	MLL	5.61e-05	1
13q-Amp	Amp_13q31.3	5.61e-27	1
DCLK3	MYO3B	5.64e-05	1
TP63	TPTE	5.76e-06	1
ALPK2	DCLK3	5.77e-06	1
ALPK2	NF1	5.78e-06	1
9p-Del	Del_9p21.3	5.84e-39	1
8q-Amp	Amp_1q21.3	5.85e-05	1
ALPK2	RPTN	5.91e-06	1
Del_6q26	Del_10q26.3	5.96e-07	1
ALPK2	THSD7B	5.97e-05	1
SLC9A11	USP17L2	5.97e-05	1
Amp_6p24.3	Amp_13q31.3	5.98e-05	1
COL3A1	EPHA7	6.04e-08	1
ALPK2	DSG3	6.07e-05	1
DCLK3	STK19	6.11e-05	1
SLC38A4	THSD7B	6.13e-05	1
10p-Del	Del_6q26	6.18e-07	1
16q-Del	Del_12q23.3	6.21e-05	1
5q-Del	9p-Del	6.23e-05	1
Del_6q21	Del_11q23.3	6.23e-08	1
Del_1p22.1	Del_9p21.3	6.24e-05	1
Del_16p13.3	Del_16q23.1	6.38e-10	1
9q-Del	Del_9p23	6.41e-22	1
Del_6q21	Del_10p15.3	6.46e-06	1
NF1	USH2A	6.51e-05	1
Del_5q12.1	Del_5q31.3	6.53e-22	1
DCLK3	TPTE	6.55e-05	1
10p-Del	9q-Del	6.61e-06	1
ANO4	MAN1A1	6.62e-06	1
MYO3B	NBPF1	6.6e-06	1
ALPK2	RELN	6.76e-05	1
11p-Del	6q-Del	6.76e-05	1
11p-Del	Del_19p13.3	6.82e-05	1
COL3A1	SLC9A11	6.84e-06	1
Del_9p23	Del_11q23.3	6.84e-10	1
Del_16p13.3	Del_16q24.3	6.86e-09	1
COL3A1	EPHA6	6.89e-05	1
Del_9p21.3	Del_10q21.1	6.91e-09	1
6q-Del	Del_12q23.3	6.94e-06	1
THSD7B	TTN	7.13e-10	1
10p-Del	Del_10q21.1	7.13e-42	1
9p-Del	Del_10q26.3	7.21e-11	1
CTNNA3	SLC9A11	7.35e-05	1
9p-Del	Del_10q21.1	7.37e-11	1
11p-Del	Del_11q23.3	7.37e-19	1
ARID2	USP17L2	7.44e-05	1
RELN	USH2A	7.44e-07	1
Del_1p22.1	Del_9p23	7.44e-07	1
10p-Del	11q-Del	7.45e-05	1
PARM1	STK19	7.52e-05	1
Del_16q12.1	Del_16q24.3	7.6e-23	1
CNTN5	SLC9A11	7.73e-05	1
EPHA6	NF1	7.73e-06	1
DSG3	XIRP2	7.74e-06	1
9q-Del	Del_10q21.1	7.78e-08	1
CPA3	MYO16	7.87e-06	1
FAM58A	SLC38A4	7.92e-05	1
Amp_8q24.21	Del_10q21.1	7.92e-05	1
SYK	USH2A	7.95e-05	1
6q-Del	Del_6q21	7.98e-38	1
DSG3	USH2A	7.99e-05	1
NBPF1	USH2A	7.99e-05	1
8p-Amp	Amp_8q24.21	8.03e-18	1
ANO4	THSD7B	8.08e-06	1
Del_9p21.3	Del_12q23.3	8.12e-05	1
7q-Amp	Amp_7p22.1	8.16e-24	1
ALPK2	CDC42BPA	8.17e-05	1
CNTN5	MPP7	8.22e-05	1
DSG3	NF1	8.23e-06	1
MYO3B	THSD7B	8.35e-05	1
Amp_8q24.21	Del_8p23.3	8.36e-07	1
NF1	SLC38A4	8.39e-08	1
FGFR2	XIRP2	8.41e-06	1
NBPF1	XIRP2	8.41e-06	1
Del_10p15.3	Del_10q26.3	8.43e-25	1
KEL	RPTN	8.44e-05	1
10p-Del	14q-Del	8.44e-06	1
CNTN5	NF1	8.46e-05	1
10p-Del	Del_6q21	8.46e-05	1
ANO4	EPHA7	8.47e-05	1
RPTN	TP63	8.48e-05	1
EPHA7	TP63	8.4e-06	1
10q-Del	Del_6q21	8.4e-06	1
ALPK2	EPHA4	8.51e-06	1
11p-Del	Del_16q12.1	8.58e-06	1
Del_1p36.31	Del_9p21.3	8.63e-07	1
Del_6q26	Del_14q23.3	8.69e-06	1
5q-Del	Del_5q12.1	8.72e-25	1
Del_6q26	Del_12q23.3	8.73e-05	1
RPTN	TPTE	8.75e-09	1
ALPK2	NUP214	8.84e-05	1
Del_9p21.3	Del_10q26.3	8.8e-08	1
NF1	PDGFRA	8.91e-05	1
CNTN5	XIRP2	8.91e-06	1
10q-Del	Del_10q23.31	8.92e-60	1
Del_6q21	Del_9p23	8.9e-08	1
KEL	USH2A	8e-05	1
THSD7B	TP63	8e-05	1
PTEN	Del_10q21.1	9.02e-05	1
11q-Del	9p-Del	9.02e-08	1
FLT1	NUP214	9.03e-05	1
10p-Del	Del_9p21.3	9.03e-09	1
9p-Del	Del_10p15.3	9.04e-11	1
CYP3A4	RPTN	9.05e-05	1
RPTN	TTN	9.14e-05	1
7p-Amp	7q-Amp	9.27e-39	1
MYO16	NAP1L2	9.32e-05	1
ANO4	SLC9A11	9.35e-06	1
10p-Del	Del_14q23.3	9.38e-06	1
DCLK3	RPTN	9.48e-06	1
Del_4p16.3	Del_16q12.1	9.61e-05	1
CAMTA1	XIRP2	9.68e-07	1
MPP7	XIRP2	9.69e-05	1
ALPK2	ANO4	9.69e-07	1
1q-Amp	Amp_1p12	9.73e-05	1
9q-Del	Del_6q21	9.73e-06	1
Del_5p15.31	Del_5q12.1	9.73e-07	1
10q-Del	11q-Del	9.74e-05	1
16q-Del	Del_10q21.1	9.74e-05	1
RELN	XIRP2	9.79e-05	1
DSG3	NBPF1	9.7e-07	1
MAN1A1	USH2A	9.81e-05	1
Del_12q23.3	Del_19p13.3	9.81e-05	1
16q-Del	Del_16q24.3	9.94e-30	1
EPHA7	MYO3B	9.95e-07	1
MYO3B	SELP	9.95e-07	1
Del_9p23	Del_10q23.31	9.95e-14	1
1q-Amp	Amp_1q21.3	9.98e-38	1
