name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-D3-A1Q1-06A-21D-A196-08	58	58	0	45	0	coding only	1	28834954	...	13	41	58	4.508417e-07	1.421885e-06	2.011448e-06	-5.696491e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A1Q3-06A-11D-A196-08	57	57	0	39	0	coding only	1	28834954	...	18	32	57	6.242424e-07	1.109764e-06	1.976768e-06	-5.704044e+00	...	7	28778763	...	2.432349e-07
TCGA-D3-A1Q4-06A-11D-A196-08	326	325	1	211	3.067485e-03	coding only	1	28834954	...	114	206	326	3.953535e-06	7.144107e-06	1.130572e-05	-4.946702e+00	...	5	28778763	...	1.737392e-07
TCGA-D3-A1Q5-06A-11D-A196-08	435	432	3	290	6.896552e-03	coding only	1	28834954	...	142	287	435	4.924579e-06	9.953198e-06	1.508586e-05	-4.821430e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A1Q6-06A-11D-A196-08	1046	1030	16	640	1.529637e-02	coding only	1	28834954	...	390	637	1046	1.352525e-05	2.209124e-05	3.627542e-05	-4.440388e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A1Q7-06A-11D-A19A-08	127	124	3	78	2.362205e-02	coding only	1	28834954	...	46	75	127	1.595286e-06	2.601010e-06	4.404377e-06	-5.356116e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A1Q8-06A-11D-A19A-08	295	289	6	192	2.033898e-02	coding only	1	28834954	...	97	191	295	3.363973e-06	6.623905e-06	1.023064e-05	-4.990097e+00	...	1	28778763	...	3.474785e-08
TCGA-D3-A1Q9-06A-11D-A19A-08	41	40	1	33	2.439024e-02	coding only	1	28834954	...	7	32	41	2.427609e-07	1.109764e-06	1.421885e-06	-5.847135e+00	...	1	28778763	...	3.474785e-08
TCGA-D3-A1QA-06A-11D-A196-08	542	533	9	341	1.660517e-02	coding only	1	28834954	...	192	336	542	6.658585e-06	1.165252e-05	1.879663e-05	-4.725920e+00	...	5	28778763	...	1.737392e-07
TCGA-D3-A1QB-06A-11D-A19A-08	448	443	5	297	1.116071e-02	coding only	1	28834954	...	146	295	448	5.063299e-06	1.023064e-05	1.553670e-05	-4.808641e+00	...	2	28778763	...	6.949569e-08
TCGA-D3-A2J6-06A-11D-A19A-08	29	27	2	17	6.896552e-02	coding only	1	28834954	...	10	15	29	3.468013e-07	5.202020e-07	1.005724e-06	-5.997521e+00	...	2	28778763	...	6.949569e-08
TCGA-D3-A2J7-06A-11D-A196-08	432	427	5	298	1.157407e-02	coding only	1	28834954	...	129	294	432	4.473737e-06	1.019596e-05	1.498182e-05	-4.824436e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A2J8-06A-11D-A196-08	811	802	9	513	1.109741e-02	coding only	1	28834954	...	289	509	811	1.002256e-05	1.765219e-05	2.812559e-05	-4.550898e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A2J9-06A-11D-A196-08	99	97	2	55	2.020202e-02	coding only	1	28834954	...	42	55	99	1.456566e-06	1.907407e-06	3.433333e-06	-5.464284e+00	...	0	28778763	...	0
TCGA-D3-A2JA-06A-11D-A196-08	439	433	6	295	1.366743e-02	coding only	1	28834954	...	138	290	439	4.785858e-06	1.005724e-05	1.522458e-05	-4.817455e+00	...	5	28778763	...	1.737392e-07
TCGA-D3-A2JB-06A-11D-A196-08	18	17	1	15	5.555556e-02	coding only	1	28834954	...	2	14	18	6.936026e-08	4.855218e-07	6.242424e-07	-6.204647e+00	...	1	28778763	...	3.474785e-08
TCGA-D3-A2JC-06A-11D-A19A-08	254	251	3	171	1.181102e-02	coding only	1	28834954	...	80	168	254	2.774411e-06	5.826262e-06	8.808753e-06	-5.055086e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A2JD-06A-11D-A19A-08	496	487	9	306	1.814516e-02	coding only	1	28834954	...	181	301	495	6.277104e-06	1.043872e-05	1.716667e-05	-4.765314e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A2JF-06A-11D-A196-08	1748	1720	28	1162	1.601831e-02	coding only	1	28834954	...	558	1157	1747	1.935151e-05	4.012491e-05	6.058619e-05	-4.217626e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A2JG-06A-11D-A196-08	143	140	3	88	2.097902e-02	coding only	1	28834954	...	52	82	143	1.803367e-06	2.843771e-06	4.959259e-06	-5.304583e+00	...	6	28778763	...	2.084871e-07
TCGA-D3-A2JH-06A-11D-A196-08	791	781	10	515	1.264223e-02	coding only	1	28834954	...	266	512	791	9.224915e-06	1.775623e-05	2.743198e-05	-4.561743e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A2JK-06A-11D-A196-08	362	354	8	231	2.209945e-02	coding only	1	28834954	...	123	230	362	4.265656e-06	7.976430e-06	1.255421e-05	-4.901211e+00	...	1	28778763	...	3.474785e-08
TCGA-D3-A2JL-06A-11D-A196-08	408	397	11	270	2.696078e-02	coding only	1	28834954	...	127	263	408	4.404377e-06	9.120875e-06	1.414949e-05	-4.849259e+00	...	7	28778763	...	2.432349e-07
TCGA-D3-A2JN-06A-11D-A196-08	410	405	5	279	1.219512e-02	coding only	1	28834954	...	126	270	410	4.369697e-06	9.363636e-06	1.421885e-05	-4.847135e+00	...	9	28778763	...	3.127306e-07
TCGA-D3-A2JO-06A-11D-A196-08	757	740	17	501	2.245707e-02	coding only	1	28834954	...	239	494	756	8.288551e-06	1.713199e-05	2.621818e-05	-4.581397e+00	...	6	28778763	...	2.084871e-07
TCGA-D3-A2JP-06A-11D-A19A-08	336	332	4	230	1.190476e-02	coding only	1	28834954	...	101	225	335	3.502693e-06	7.803030e-06	1.161784e-05	-4.934874e+00	...	5	28778763	...	1.737392e-07
TCGA-D3-A3BZ-06A-12D-A196-08	80	79	1	67	1.250000e-02	coding only	1	28834954	...	12	64	80	4.161616e-07	2.219528e-06	2.774411e-06	-5.556829e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A3C1-06A-12D-A196-08	182	180	2	127	1.098901e-02	coding only	1	28834954	...	53	123	182	1.838047e-06	4.265656e-06	6.311784e-06	-5.199848e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A3C3-06A-12D-A19A-08	309	307	2	216	6.472492e-03	coding only	1	28834954	...	91	213	309	3.155892e-06	7.386868e-06	1.071616e-05	-4.969961e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A3C6-06A-12D-A196-08	136	135	1	85	7.352941e-03	coding only	1	28834954	...	50	82	136	1.734007e-06	2.843771e-06	4.716498e-06	-5.326380e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A3C7-06A-11D-A196-08	1165	1144	21	792	1.802575e-02	coding only	1	28834954	...	352	786	1165	1.220741e-05	2.725858e-05	4.040235e-05	-4.393593e+00	...	5	28778763	...	1.737392e-07
TCGA-D3-A3C8-06A-12D-A19A-08	893	873	20	591	2.239642e-02	coding only	1	28834954	...	282	587	893	9.779797e-06	2.035724e-05	3.096936e-05	-4.509068e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A3CB-06A-11D-A196-08	322	316	6	207	1.863354e-02	coding only	1	28834954	...	109	204	322	3.780134e-06	7.074747e-06	1.116700e-05	-4.952063e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A3CC-06A-11D-A19A-08	39	38	1	30	2.564103e-02	coding only	1	28834954	...	8	27	39	2.774411e-07	9.363636e-07	1.352525e-06	-5.868855e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A3CE-06A-11D-A19A-08	44	44	0	36	0	coding only	1	28834954	...	8	30	44	2.774411e-07	1.040404e-06	1.525926e-06	-5.816467e+00	...	6	28778763	...	2.084871e-07
TCGA-D3-A3CF-06A-11D-A196-08	37	37	0	30	0	coding only	1	28834954	...	7	29	37	2.427609e-07	1.005724e-06	1.283165e-06	-5.891718e+00	...	1	28778763	...	3.474785e-08
TCGA-D3-A3ML-06A-11D-A21A-08	1141	1120	21	735	1.840491e-02	coding only	1	28834954	...	385	728	1141	1.335185e-05	2.524714e-05	3.957003e-05	-4.402634e+00	...	7	28778763	...	2.432349e-07
TCGA-D3-A3MO-06A-11D-A21A-08	83	80	3	57	3.614458e-02	coding only	1	28834954	...	23	53	83	7.976430e-07	1.838047e-06	2.878451e-06	-5.540841e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A3MR-06A-11D-A21A-08	1094	1076	18	718	1.645338e-02	coding only	1	28834954	...	358	709	1093	1.241549e-05	2.458821e-05	3.790538e-05	-4.421299e+00	...	9	28778763	...	3.127306e-07
TCGA-D3-A3MU-06A-11D-A21A-08	599	590	9	415	1.502504e-02	coding only	1	28834954	...	175	411	599	6.069023e-06	1.425353e-05	2.077340e-05	-4.682492e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A3MV-06A-11D-A21A-08	655	647	8	402	1.221374e-02	coding only	1	28834954	...	245	396	655	8.496632e-06	1.373333e-05	2.271549e-05	-4.643678e+00	...	6	28778763	...	2.084871e-07
TCGA-D3-A51E-06A-11D-A25O-08	346	340	6	236	1.734104e-02	coding only	1	28834954	...	104	229	345	3.606734e-06	7.941750e-06	1.196465e-05	-4.922100e+00	...	5	28778763	...	1.737392e-07
TCGA-D3-A51F-06A-11D-A25O-08	159	159	0	106	0	coding only	1	28834954	...	53	105	159	1.838047e-06	3.641414e-06	5.514141e-06	-5.258522e+00	...	1	28778763	...	3.474785e-08
TCGA-D3-A51G-06A-11D-A25O-08	1524	1484	40	958	2.624672e-02	coding only	1	28834954	...	526	948	1524	1.824175e-05	3.287676e-05	5.285252e-05	-4.276934e+00	...	9	28778763	...	3.127306e-07
TCGA-D3-A51H-06A-12D-A25O-08	75	75	0	48	0	coding only	1	28834954	...	27	45	75	9.363636e-07	1.560606e-06	2.601010e-06	-5.584858e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A51J-06A-11D-A25O-08	559	555	4	381	7.155635e-03	coding only	1	28834954	...	174	380	559	6.034343e-06	1.317845e-05	1.938619e-05	-4.712507e+00	...	1	28778763	...	3.474785e-08
TCGA-D3-A51K-06A-11D-A25O-08	31	31	0	26	0	coding only	1	28834954	...	5	24	31	1.734007e-07	8.323232e-07	1.075084e-06	-5.968558e+00	...	2	28778763	...	6.949569e-08
TCGA-D3-A51N-06A-11D-A25O-08	119	117	2	86	1.680672e-02	coding only	1	28834954	...	31	84	119	1.075084e-06	2.913131e-06	4.126936e-06	-5.384372e+00	...	2	28778763	...	6.949569e-08
TCGA-D3-A51R-06A-11D-A25O-08	887	873	14	574	1.578354e-02	coding only	1	28834954	...	299	570	887	1.036936e-05	1.976768e-05	3.076128e-05	-4.511996e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A51T-06A-11D-A25O-08	1444	1420	24	937	1.662050e-02	coding only	1	28834954	...	483	931	1444	1.675050e-05	3.228720e-05	5.007811e-05	-4.300352e+00	...	6	28778763	...	2.084871e-07
TCGA-D3-A5GL-06A-11D-A27K-08	521	508	13	353	2.495202e-02	coding only	1	28834954	...	155	343	521	5.375420e-06	1.189529e-05	1.806835e-05	-4.743082e+00	...	9	28778763	...	3.127306e-07
TCGA-D3-A5GN-06A-11D-A27K-08	591	578	13	380	2.199662e-02	coding only	1	28834954	...	198	376	591	6.866666e-06	1.303973e-05	2.049596e-05	-4.688332e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A5GO-06A-12D-A27K-08	1949	1930	19	1268	9.748589e-03	coding only	1	28834954	...	661	1260	1946	2.292357e-05	4.369697e-05	6.748754e-05	-4.170776e+00	...	6	28778763	...	2.084871e-07
TCGA-D3-A5GR-06A-11D-A27K-08	328	324	4	208	1.219512e-02	coding only	1	28834954	...	116	205	328	4.022895e-06	7.109427e-06	1.137508e-05	-4.944045e+00	...	3	28778763	...	1.042435e-07
TCGA-D3-A5GS-06A-11D-A27K-08	494	489	5	320	1.012146e-02	coding only	1	28834954	...	169	315	493	5.860942e-06	1.092424e-05	1.709730e-05	-4.767072e+00	...	4	28778763	...	1.389914e-07
TCGA-D3-A5GU-06A-11D-A27K-08	841	832	9	588	1.070155e-02	coding only	1	28834954	...	244	580	841	8.461952e-06	2.011448e-05	2.916599e-05	-4.535123e+00	...	8	28778763	...	2.779828e-07
TCGA-D9-A148-06A-11D-A19A-08	353	350	3	229	8.498584e-03	coding only	1	28834954	...	121	223	353	4.196296e-06	7.733669e-06	1.224209e-05	-4.912145e+00	...	5	28778763	...	1.737392e-07
TCGA-D9-A149-06A-11D-A196-08	286	281	5	193	1.748252e-02	coding only	1	28834954	...	88	191	286	3.051852e-06	6.623905e-06	9.918518e-06	-5.003553e+00	...	2	28778763	...	6.949569e-08
TCGA-D9-A1JW-06A-11D-A19A-08	1128	1105	23	732	2.039007e-02	coding only	1	28834954	...	373	722	1128	1.293569e-05	2.503906e-05	3.911919e-05	-4.407610e+00	...	7	28778763	...	2.432349e-07
TCGA-D9-A1JX-06A-11D-A19A-08	229	225	4	159	1.746725e-02	coding only	1	28834954	...	66	156	229	2.288889e-06	5.410101e-06	7.941750e-06	-5.100084e+00	...	3	28778763	...	1.042435e-07
TCGA-D9-A3Z1-06A-11D-A23B-08	632	620	12	402	1.898734e-02	coding only	1	28834954	...	218	397	632	7.560269e-06	1.376801e-05	2.191784e-05	-4.659202e+00	...	5	28778763	...	1.737392e-07
TCGA-D9-A3Z3-06A-11D-A23B-08	165	164	1	110	6.060606e-03	coding only	1	28834954	...	54	109	165	1.872727e-06	3.780134e-06	5.722222e-06	-5.242435e+00	...	1	28778763	...	3.474785e-08
TCGA-D9-A6E9-06A-12D-A30X-08	225	222	3	164	1.333333e-02	coding only	1	28834954	...	58	161	225	2.011448e-06	5.583501e-06	7.803030e-06	-5.107737e+00	...	3	28778763	...	1.042435e-07
TCGA-D9-A6EA-06A-11D-A30X-08	824	818	6	540	7.281553e-03	coding only	1	28834954	...	278	535	824	9.641077e-06	1.855387e-05	2.857643e-05	-4.543992e+00	...	5	28778763	...	1.737392e-07
TCGA-D9-A6EC-06A-11D-A30X-08	5471	5387	84	3807	1.535368e-02	coding only	1	28834954	...	1579	3793	5467	5.475993e-05	1.315417e-04	1.895963e-04	-3.722170e+00	...	11	28778763	...	3.822263e-07
TCGA-D9-A6EG-06A-12D-A32N-08	102	101	1	68	9.803922e-03	coding only	1	28834954	...	33	62	102	1.144444e-06	2.150168e-06	3.537373e-06	-5.451319e+00	...	6	28778763	...	2.084871e-07
TCGA-DA-A1HV-06A-21D-A196-08	1712	1685	27	1101	1.577103e-02	coding only	1	28834954	...	584	1097	1712	2.025320e-05	3.804410e-05	5.937239e-05	-4.226416e+00	...	4	28778763	...	1.389914e-07
TCGA-DA-A1HW-06A-11D-A19A-08	406	396	10	258	2.463054e-02	coding only	1	28834954	...	138	252	406	4.785858e-06	8.739393e-06	1.408013e-05	-4.851393e+00	...	6	28778763	...	2.084871e-07
TCGA-DA-A1HY-06A-11D-A19A-08	901	888	13	598	1.442841e-02	coding only	1	28834954	...	290	593	901	1.005724e-05	2.056532e-05	3.124680e-05	-4.505194e+00	...	5	28778763	...	1.737392e-07
TCGA-DA-A1I0-06A-11D-A20D-08	616	605	11	406	1.785714e-02	coding only	1	28834954	...	199	399	616	6.901346e-06	1.383737e-05	2.136296e-05	-4.670339e+00	...	7	28778763	...	2.432349e-07
TCGA-DA-A1I1-06A-12D-A196-08	473	467	6	325	1.268499e-02	coding only	1	28834954	...	142	320	473	4.924579e-06	1.109764e-05	1.640370e-05	-4.785058e+00	...	4	28778763	...	1.389914e-07
TCGA-DA-A1I2-06A-21D-A19A-08	161	160	1	102	6.211180e-03	coding only	1	28834954	...	58	100	161	2.011448e-06	3.468013e-06	5.583501e-06	-5.253093e+00	...	2	28778763	...	6.949569e-08
TCGA-DA-A1I4-06A-11D-A196-08	324	320	4	223	1.234568e-02	coding only	1	28834954	...	97	220	324	3.363973e-06	7.629629e-06	1.123636e-05	-4.949374e+00	...	3	28778763	...	1.042435e-07
TCGA-DA-A1I5-06A-11D-A197-08	554	544	10	365	1.805054e-02	coding only	1	28834954	...	179	357	554	6.207744e-06	1.238081e-05	1.921279e-05	-4.716409e+00	...	7	28778763	...	2.432349e-07
TCGA-DA-A1I7-06A-22D-A197-08	567	557	10	360	1.763668e-02	coding only	1	28834954	...	197	355	567	6.831986e-06	1.231145e-05	1.966363e-05	-4.706336e+00	...	5	28778763	...	1.737392e-07
TCGA-DA-A1I8-06A-11D-A197-08	231	226	5	135	2.164502e-02	coding only	1	28834954	...	91	133	231	3.155892e-06	4.612458e-06	8.011110e-06	-5.096307e+00	...	2	28778763	...	6.949569e-08
TCGA-DA-A1IA-06A-11D-A196-08	447	439	8	274	1.789709e-02	coding only	1	28834954	...	165	269	447	5.722222e-06	9.328955e-06	1.550202e-05	-4.809612e+00	...	5	28778763	...	1.737392e-07
TCGA-DA-A1IB-06A-11D-A196-08	25	25	0	22	0	coding only	1	28834954	...	3	19	25	1.040404e-07	6.589225e-07	8.670033e-07	-6.061979e+00	...	3	28778763	...	1.042435e-07
TCGA-DA-A1IC-06A-11D-A197-08	1215	1189	26	767	2.139918e-02	coding only	1	28834954	...	422	760	1215	1.463502e-05	2.635690e-05	4.213636e-05	-4.375343e+00	...	7	28778763	...	2.432349e-07
TCGA-DA-A3F2-06A-11D-A20D-08	9	9	0	7	0	coding only	1	28834954	...	2	6	9	6.936026e-08	2.080808e-07	3.121212e-07	-6.505677e+00	...	1	28778763	...	3.474785e-08
TCGA-DA-A3F3-06A-11D-A20D-08	371	365	6	260	1.617251e-02	coding only	1	28834954	...	105	254	371	3.641414e-06	8.808753e-06	1.286633e-05	-4.890545e+00	...	6	28778763	...	2.084871e-07
TCGA-DA-A3F5-06A-11D-A20D-08	421	416	5	284	1.187648e-02	coding only	1	28834954	...	132	280	421	4.577777e-06	9.710437e-06	1.460034e-05	-4.835637e+00	...	4	28778763	...	1.389914e-07
TCGA-DA-A3F8-06A-11D-A20D-08	1494	1478	16	962	1.070950e-02	coding only	1	28834954	...	515	955	1493	1.786027e-05	3.311953e-05	5.177744e-05	-4.285859e+00	...	6	28778763	...	2.084871e-07
TCGA-EB-A44Q-06A-11D-A25O-08	66	65	1	51	1.515152e-02	coding only	1	28834954	...	14	47	66	4.855218e-07	1.629966e-06	2.288889e-06	-5.640375e+00	...	4	28778763	...	1.389914e-07
TCGA-EB-A44R-06A-41D-A25O-08	73	72	1	50	1.369863e-02	coding only	1	28834954	...	22	48	73	7.629629e-07	1.664646e-06	2.531650e-06	-5.596596e+00	...	2	28778763	...	6.949569e-08
TCGA-EB-A5KH-06A-11D-A27K-08	53	52	1	39	1.886792e-02	coding only	1	28834954	...	13	35	53	4.508417e-07	1.213805e-06	1.838047e-06	-5.735643e+00	...	4	28778763	...	1.389914e-07
TCGA-EB-A5SG-06A-11D-A30X-08	366	364	2	238	5.464481e-03	coding only	1	28834954	...	126	236	366	4.369697e-06	8.184511e-06	1.269293e-05	-4.896438e+00	...	2	28778763	...	6.949569e-08
TCGA-EB-A5SH-06A-11D-A30X-08	118	117	1	91	8.474576e-03	coding only	1	28834954	...	26	86	117	9.016834e-07	2.982491e-06	4.057575e-06	-5.391733e+00	...	4	28778763	...	1.389914e-07
TCGA-EB-A5UL-06A-11D-A30X-08	586	576	10	389	1.706485e-02	coding only	1	28834954	...	187	386	585	6.485185e-06	1.338653e-05	2.028788e-05	-4.692763e+00	...	1	28778763	...	3.474785e-08
TCGA-EB-A5UN-06A-11D-A30X-08	904	885	19	602	2.101770e-02	coding only	1	28834954	...	283	591	902	9.814477e-06	2.049596e-05	3.128148e-05	-4.504713e+00	...	9	28778763	...	3.127306e-07
TCGA-EB-A5VV-06A-11D-A32N-08	8	8	0	6	0	coding only	1	28834954	...	2	5	8	6.936026e-08	1.734007e-07	2.774411e-07	-6.556829e+00	...	1	28778763	...	3.474785e-08
TCGA-EB-A6L9-06A-11D-A32N-08	38	38	0	24	0	coding only	1	28834954	...	14	17	38	4.855218e-07	5.895622e-07	1.317845e-06	-5.880136e+00	...	7	28778763	...	2.432349e-07
TCGA-EE-A17X-06A-11D-A197-08	983	969	14	654	1.424212e-02	coding only	1	28834954	...	315	648	982	1.092424e-05	2.247273e-05	3.405589e-05	-4.467808e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A17Y-06A-11D-A196-08	207	204	3	135	1.449275e-02	coding only	1	28834954	...	69	132	207	2.392929e-06	4.577777e-06	7.178787e-06	-5.143949e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A17Z-06A-11D-A196-08	27	27	0	23	0	coding only	1	28834954	...	4	20	27	1.387205e-07	6.936026e-07	9.363636e-07	-6.028555e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A180-06A-11D-A21A-08	647	635	12	435	1.854714e-02	coding only	1	28834954	...	200	423	646	6.936026e-06	1.466970e-05	2.240337e-05	-4.649687e+00	...	11	28778763	...	3.822263e-07
TCGA-EE-A181-06A-11D-A196-08	3787	3714	73	2442	1.927647e-02	coding only	1	28834954	...	1272	2429	3787	4.411313e-05	8.423804e-05	1.313337e-04	-3.881624e+00	...	12	28778763	...	4.169741e-07
TCGA-EE-A182-06A-11D-A196-08	1824	1795	29	1155	1.589912e-02	coding only	1	28834954	...	640	1144	1824	2.219528e-05	3.967407e-05	6.325656e-05	-4.198894e+00	...	11	28778763	...	3.822263e-07
TCGA-EE-A183-06A-11D-A196-08	947	935	12	642	1.267159e-02	coding only	1	28834954	...	293	636	947	1.016128e-05	2.205656e-05	3.284208e-05	-4.483569e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A184-06A-11D-A196-08	347	337	10	245	2.881844e-02	coding only	1	28834954	...	92	241	347	3.190572e-06	8.357912e-06	1.203401e-05	-4.919590e+00	...	4	28778763	...	1.389914e-07
TCGA-EE-A185-06A-11D-A196-08	236	233	3	157	1.271186e-02	coding only	1	28834954	...	76	155	236	2.635690e-06	5.375420e-06	8.184511e-06	-5.087007e+00	...	2	28778763	...	6.949569e-08
TCGA-EE-A20B-06A-11D-A196-08	222	217	5	152	2.252252e-02	coding only	1	28834954	...	65	149	222	2.254209e-06	5.167340e-06	7.698989e-06	-5.113566e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A20C-06A-11D-A196-08	2600	2567	33	1682	1.269231e-02	coding only	1	28834954	...	885	1663	2600	3.069192e-05	5.767306e-05	9.016834e-05	-4.044946e+00	...	18	28778763	...	6.254612e-07
TCGA-EE-A20F-06A-21D-A196-08	601	595	6	385	9.983361e-03	coding only	1	28834954	...	210	377	601	7.282828e-06	1.307441e-05	2.084276e-05	-4.681045e+00	...	8	28778763	...	2.779828e-07
TCGA-EE-A20H-06A-11D-A197-08	722	707	15	488	2.077562e-02	coding only	1	28834954	...	219	482	721	7.594949e-06	1.671582e-05	2.500437e-05	-4.601984e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A20I-06A-11D-A196-08	26	24	2	17	7.692308e-02	coding only	1	28834954	...	7	15	26	2.427609e-07	5.202020e-07	9.016834e-07	-6.044946e+00	...	2	28778763	...	6.949569e-08
TCGA-EE-A29A-06A-12D-A196-08	316	310	6	205	1.898734e-02	coding only	1	28834954	...	105	199	316	3.641414e-06	6.901346e-06	1.095892e-05	-4.960232e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A29B-06A-11D-A197-08	675	665	10	461	1.481481e-02	coding only	1	28834954	...	204	458	675	7.074747e-06	1.588350e-05	2.340909e-05	-4.630615e+00	...	2	28778763	...	6.949569e-08
TCGA-EE-A29C-06A-21D-A197-08	517	504	13	342	2.514507e-02	coding only	1	28834954	...	162	339	517	5.618181e-06	1.175656e-05	1.792963e-05	-4.746429e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A29D-06A-11D-A197-08	4676	4605	71	2984	1.518392e-02	coding only	1	28834954	...	1620	2965	4673	5.618181e-05	1.028266e-04	1.620603e-04	-3.790323e+00	...	17	28778763	...	5.907134e-07
TCGA-EE-A29E-06A-11D-A197-08	4403	4345	58	2805	1.317284e-02	coding only	1	28834954	...	1540	2794	4401	5.340740e-05	9.689629e-05	1.526273e-04	-3.816368e+00	...	8	28778763	...	2.779828e-07
TCGA-EE-A29G-06A-12D-A196-08	492	485	7	333	1.422764e-02	coding only	1	28834954	...	152	327	492	5.271380e-06	1.134040e-05	1.706262e-05	-4.767954e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A29H-06A-12D-A197-08	387	382	5	259	1.291990e-02	coding only	1	28834954	...	123	253	387	4.265656e-06	8.774073e-06	1.342121e-05	-4.872208e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A29L-06A-12D-A196-08	2490	2450	40	1602	1.606426e-02	coding only	1	28834954	...	848	1589	2490	2.940875e-05	5.510673e-05	8.635353e-05	-4.063720e+00	...	11	28778763	...	3.822263e-07
TCGA-EE-A29M-06A-11D-A196-08	2882	2831	51	1894	1.769604e-02	coding only	1	28834954	...	937	1879	2881	3.249528e-05	6.516397e-05	9.991346e-05	-4.000376e+00	...	14	28778763	...	4.864698e-07
TCGA-EE-A29N-06A-12D-A197-08	794	780	14	521	1.763224e-02	coding only	1	28834954	...	258	506	792	8.947474e-06	1.754815e-05	2.746666e-05	-4.561194e+00	...	14	28778763	...	4.864698e-07
TCGA-EE-A29P-06A-11D-A197-08	389	380	9	248	2.313625e-02	coding only	1	28834954	...	132	241	389	4.577777e-06	8.357912e-06	1.349057e-05	-4.869970e+00	...	7	28778763	...	2.432349e-07
TCGA-EE-A29Q-06A-11D-A197-08	370	362	8	234	2.162162e-02	coding only	1	28834954	...	128	232	370	4.439057e-06	8.045791e-06	1.283165e-05	-4.891718e+00	...	2	28778763	...	6.949569e-08
TCGA-EE-A29R-06A-11D-A197-08	840	825	15	528	1.785714e-02	coding only	1	28834954	...	296	528	839	1.026532e-05	1.831111e-05	2.909663e-05	-4.536157e+00	...	0	28778763	...	0
TCGA-EE-A29S-06A-11D-A197-08	1317	1301	16	854	1.214882e-02	coding only	1	28834954	...	447	848	1317	1.550202e-05	2.940875e-05	4.567373e-05	-4.340333e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A29T-06A-11D-A197-08	469	461	8	319	1.705757e-02	coding only	1	28834954	...	142	312	469	4.924579e-06	1.082020e-05	1.626498e-05	-4.788746e+00	...	7	28778763	...	2.432349e-07
TCGA-EE-A29V-06A-12D-A197-08	1291	1276	15	830	1.161890e-02	coding only	1	28834954	...	446	822	1291	1.546734e-05	2.850707e-05	4.477205e-05	-4.348993e+00	...	8	28778763	...	2.779828e-07
TCGA-EE-A29W-06A-11D-A196-08	92	92	0	66	0	coding only	1	28834954	...	26	63	92	9.016834e-07	2.184848e-06	3.190572e-06	-5.496131e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A29X-06A-11D-A196-08	188	185	3	117	1.595745e-02	coding only	1	28834954	...	68	116	188	2.358249e-06	4.022895e-06	6.519865e-06	-5.185761e+00	...	1	28778763	...	3.474785e-08
TCGA-EE-A2A0-06A-11D-A196-08	486	481	5	350	1.028807e-02	coding only	1	28834954	...	131	347	486	4.543097e-06	1.203401e-05	1.685454e-05	-4.773283e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A2A1-06A-11D-A197-08	479	472	7	321	1.461378e-02	coding only	1	28834954	...	151	314	479	5.236700e-06	1.088956e-05	1.661178e-05	-4.779584e+00	...	7	28778763	...	2.432349e-07
TCGA-EE-A2A2-06A-11D-A196-08	2026	1988	38	1358	1.875617e-02	coding only	1	28834954	...	629	1277	2025	2.181380e-05	4.428653e-05	7.022727e-05	-4.153494e+00	...	78	28778763	...	2.710332e-06
TCGA-EE-A2A5-06A-11D-A197-08	409	401	8	268	1.955990e-02	coding only	1	28834954	...	133	262	409	4.612458e-06	9.086194e-06	1.418417e-05	-4.848196e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A2A6-06A-11D-A197-08	385	378	7	245	1.818182e-02	coding only	1	28834954	...	133	242	385	4.612458e-06	8.392592e-06	1.335185e-05	-4.874459e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A2GB-06A-11D-A197-08	812	803	9	547	1.108374e-02	coding only	1	28834954	...	256	541	812	8.878114e-06	1.876195e-05	2.816027e-05	-4.550363e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A2GC-06A-11D-A197-08	2857	2814	43	1860	1.505075e-02	coding only	1	28834954	...	954	1848	2856	3.308485e-05	6.408888e-05	9.904646e-05	-4.004161e+00	...	12	28778763	...	4.169741e-07
TCGA-EE-A2GD-06A-11D-A196-08	686	670	16	454	2.332362e-02	coding only	1	28834954	...	216	449	686	7.490908e-06	1.557138e-05	2.379057e-05	-4.623595e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A2GE-06A-11D-A196-08	313	305	8	198	2.555911e-02	coding only	1	28834954	...	107	195	313	3.710774e-06	6.762626e-06	1.085488e-05	-4.964375e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A2GH-06A-11D-A196-08	397	389	8	264	2.015113e-02	coding only	1	28834954	...	125	258	397	4.335016e-06	8.947474e-06	1.376801e-05	-4.861129e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A2GI-06A-11D-A196-08	1972	1930	42	1270	2.129817e-02	coding only	1	28834954	...	660	1258	1972	2.288889e-05	4.362761e-05	6.838922e-05	-4.165012e+00	...	12	28778763	...	4.169741e-07
TCGA-EE-A2GJ-06A-11D-A196-08	1434	1418	16	905	1.115760e-02	coding only	1	28834954	...	512	898	1433	1.775623e-05	3.114276e-05	4.969663e-05	-4.303673e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A2GK-06A-11D-A196-08	3	3	0	3	0	coding only	1	28834954	...	0	0	3	0	0	1.040404e-07	-6.982798e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A2GL-06A-11D-A196-08	458	451	7	290	1.528384e-02	coding only	1	28834954	...	161	287	458	5.583501e-06	9.953198e-06	1.588350e-05	-4.799054e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A2GM-06B-11D-A196-08	892	884	8	584	8.968610e-03	coding only	1	28834954	...	300	572	892	1.040404e-05	1.983704e-05	3.093468e-05	-4.509554e+00	...	12	28778763	...	4.169741e-07
TCGA-EE-A2GN-06A-11D-A196-08	534	525	9	368	1.685393e-02	coding only	1	28834954	...	157	363	534	5.444781e-06	1.258889e-05	1.851919e-05	-4.732378e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A2GO-06A-11D-A196-08	2494	2454	40	1553	1.603849e-02	coding only	1	28834954	...	901	1542	2492	3.124680e-05	5.347676e-05	8.642289e-05	-4.063371e+00	...	9	28778763	...	3.127306e-07
TCGA-EE-A2GP-06A-11D-A197-08	783	771	12	500	1.532567e-02	coding only	1	28834954	...	271	494	783	9.398316e-06	1.713199e-05	2.715454e-05	-4.566158e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A2GR-06A-11D-A197-08	2036	2011	25	1301	1.227898e-02	coding only	1	28834954	...	710	1285	2036	2.462289e-05	4.456397e-05	7.060875e-05	-4.151141e+00	...	16	28778763	...	5.559655e-07
TCGA-EE-A2GS-06A-12D-A197-08	413	406	7	284	1.694915e-02	coding only	1	28834954	...	122	281	413	4.230976e-06	9.745117e-06	1.432289e-05	-4.843969e+00	...	2	28778763	...	6.949569e-08
TCGA-EE-A2GT-06A-12D-A197-08	433	430	3	285	6.928406e-03	coding only	1	28834954	...	145	281	433	5.028619e-06	9.745117e-06	1.501650e-05	-4.823431e+00	...	4	28778763	...	1.389914e-07
TCGA-EE-A2GU-06A-11D-A196-08	732	713	19	478	2.595628e-02	coding only	1	28834954	...	235	476	731	8.149831e-06	1.650774e-05	2.535118e-05	-4.596002e+00	...	1	28778763	...	3.474785e-08
TCGA-EE-A2M5-06A-12D-A197-08	2480	2432	48	1606	1.935484e-02	coding only	1	28834954	...	826	1590	2478	2.864579e-05	5.514141e-05	8.593737e-05	-4.065818e+00	...	12	28778763	...	4.169741e-07
TCGA-EE-A2M6-06A-12D-A197-08	676	662	14	452	2.071006e-02	coding only	1	28834954	...	210	443	676	7.282828e-06	1.536330e-05	2.344377e-05	-4.629973e+00	...	9	28778763	...	3.127306e-07
TCGA-EE-A2M7-06A-11D-A197-08	84	78	6	47	7.142857e-02	coding only	1	28834954	...	31	46	84	1.075084e-06	1.595286e-06	2.913131e-06	-5.535640e+00	...	1	28778763	...	3.474785e-08
TCGA-EE-A2M8-06A-12D-A196-08	141	141	0	94	0	coding only	1	28834954	...	47	93	141	1.629966e-06	3.225252e-06	4.889899e-06	-5.310700e+00	...	1	28778763	...	3.474785e-08
TCGA-EE-A2MC-06A-12D-A197-08	948	931	17	619	1.793249e-02	coding only	1	28834954	...	312	613	947	1.082020e-05	2.125892e-05	3.284208e-05	-4.483569e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A2MD-06A-11D-A197-08	2107	2070	37	1348	1.756051e-02	coding only	1	28834954	...	722	1337	2107	2.503906e-05	4.636734e-05	7.307104e-05	-4.136255e+00	...	10	28778763	...	3.474785e-07
TCGA-EE-A2ME-06A-11D-A197-08	77	77	0	50	0	coding only	1	28834954	...	27	49	77	9.363636e-07	1.699326e-06	2.670370e-06	-5.573429e+00	...	1	28778763	...	3.474785e-08
TCGA-EE-A2MF-06A-11D-A21A-08	936	917	19	614	2.029915e-02	coding only	1	28834954	...	303	600	935	1.050808e-05	2.080808e-05	3.242592e-05	-4.489108e+00	...	14	28778763	...	4.864698e-07
TCGA-EE-A2MG-06A-11D-A197-08	271	268	3	184	1.107011e-02	coding only	1	28834954	...	84	184	271	2.913131e-06	6.381144e-06	9.398316e-06	-5.026950e+00	...	0	28778763	...	0
TCGA-EE-A2MH-06A-11D-A197-08	188	183	5	112	2.659574e-02	coding only	1	28834954	...	71	107	188	2.462289e-06	3.710774e-06	6.519865e-06	-5.185761e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A2MI-06A-11D-A197-08	1318	1306	12	858	9.104704e-03	coding only	1	28834954	...	448	850	1318	1.553670e-05	2.947811e-05	4.570841e-05	-4.340004e+00	...	8	28778763	...	2.779828e-07
TCGA-EE-A2MJ-06A-11D-A197-08	2880	2847	33	1869	1.145833e-02	coding only	1	28834954	...	977	1861	2878	3.388249e-05	6.453972e-05	9.980942e-05	-4.000828e+00	...	7	28778763	...	2.432349e-07
TCGA-EE-A2MK-06A-11D-A196-08	366	361	5	237	1.366120e-02	coding only	1	28834954	...	124	233	366	4.300336e-06	8.080471e-06	1.269293e-05	-4.896438e+00	...	4	28778763	...	1.389914e-07
TCGA-EE-A2ML-06A-11D-A197-08	703	692	11	460	1.564723e-02	coding only	1	28834954	...	232	455	703	8.045791e-06	1.577946e-05	2.438013e-05	-4.612964e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A2MM-06A-11D-A196-08	700	682	18	444	2.571429e-02	coding only	1	28834954	...	238	439	700	8.253871e-06	1.522458e-05	2.427609e-05	-4.614821e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A2MN-06A-11D-A197-08	186	184	2	116	1.075269e-02	coding only	1	28834954	...	68	113	185	2.358249e-06	3.918855e-06	6.415824e-06	-5.192748e+00	...	2	28778763	...	6.949569e-08
TCGA-EE-A2MP-06A-11D-A197-08	354	352	2	248	5.649718e-03	coding only	1	28834954	...	104	240	354	3.606734e-06	8.323232e-06	1.227677e-05	-4.910916e+00	...	8	28778763	...	2.779828e-07
TCGA-EE-A2MQ-06A-11D-A197-08	327	325	2	218	6.116208e-03	coding only	1	28834954	...	107	213	327	3.710774e-06	7.386868e-06	1.134040e-05	-4.945372e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A2MR-06A-11D-A196-08	6370	6274	96	3858	1.507064e-02	coding only	1	28834954	...	2416	3850	6369	8.378720e-05	1.335185e-04	2.208778e-04	-3.655848e+00	...	7	28778763	...	2.432349e-07
TCGA-EE-A2MS-06A-11D-A197-08	3598	3529	69	2266	1.917732e-02	coding only	1	28834954	...	1263	2250	3598	4.380101e-05	7.803030e-05	1.247791e-04	-3.903858e+00	...	16	28778763	...	5.559655e-07
TCGA-EE-A2MT-06A-11D-A197-08	1119	1101	18	738	1.608579e-02	coding only	1	28834954	...	363	725	1119	1.258889e-05	2.514310e-05	3.880707e-05	-4.411089e+00	...	13	28778763	...	4.517220e-07
TCGA-EE-A2MU-06A-21D-A196-08	844	833	11	559	1.303318e-02	coding only	1	28834954	...	274	555	844	9.502356e-06	1.924747e-05	2.927003e-05	-4.533577e+00	...	2	28778763	...	6.949569e-08
TCGA-EE-A3AA-06A-11D-A196-08	2216	2181	35	1434	1.579422e-02	coding only	1	28834954	...	747	1425	2215	2.590606e-05	4.941919e-05	7.681649e-05	-4.114546e+00	...	6	28778763	...	2.084871e-07
TCGA-EE-A3AB-06A-11D-A196-08	837	818	19	568	2.270012e-02	coding only	1	28834954	...	250	568	837	8.670033e-06	1.969831e-05	2.902727e-05	-4.537194e+00	...	0	28778763	...	0
TCGA-EE-A3AC-06A-11D-A196-08	1252	1240	12	818	9.584665e-03	coding only	1	28834954	...	422	813	1252	1.463502e-05	2.819495e-05	4.341952e-05	-4.362315e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A3AD-06A-11D-A196-08	547	538	9	339	1.645338e-02	coding only	1	28834954	...	199	332	547	6.901346e-06	1.151380e-05	1.897003e-05	-4.721932e+00	...	7	28778763	...	2.432349e-07
TCGA-EE-A3AE-06A-11D-A196-08	1776	1753	23	1137	1.295045e-02	coding only	1	28834954	...	616	1132	1776	2.136296e-05	3.925791e-05	6.159191e-05	-4.210476e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A3AF-06A-11D-A196-08	1222	1211	11	835	9.001637e-03	coding only	1	28834954	...	376	824	1222	1.303973e-05	2.857643e-05	4.237912e-05	-4.372848e+00	...	11	28778763	...	3.822263e-07
TCGA-EE-A3AG-06A-31D-A196-08	2093	2065	28	1319	1.337793e-02	coding only	1	28834954	...	746	1303	2093	2.587138e-05	4.518821e-05	7.258552e-05	-4.139150e+00	...	16	28778763	...	5.559655e-07
TCGA-EE-A3AH-06A-11D-A196-08	480	474	6	335	1.250000e-02	coding only	1	28834954	...	139	318	479	4.820538e-06	1.102828e-05	1.661178e-05	-4.779584e+00	...	16	28778763	...	5.559655e-07
TCGA-EE-A3J3-06A-11D-A20D-08	217	215	2	137	9.216590e-03	coding only	1	28834954	...	78	136	217	2.705050e-06	4.716498e-06	7.525589e-06	-5.123460e+00	...	1	28778763	...	3.474785e-08
TCGA-EE-A3J4-06A-11D-A20D-08	392	389	3	280	7.653061e-03	coding only	1	28834954	...	109	275	392	3.780134e-06	9.537036e-06	1.359461e-05	-4.866633e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A3J5-06A-11D-A20D-08	2635	2584	51	1749	1.935484e-02	coding only	1	28834954	...	835	1727	2634	2.895791e-05	5.989259e-05	9.134747e-05	-4.039303e+00	...	20	28778763	...	6.949569e-07
TCGA-EE-A3J7-06A-11D-A20D-08	1273	1261	12	821	9.426551e-03	coding only	1	28834954	...	440	804	1273	1.525926e-05	2.788283e-05	4.414781e-05	-4.355091e+00	...	17	28778763	...	5.907134e-07
TCGA-EE-A3J8-06A-11D-A20D-08	338	333	5	222	1.479290e-02	coding only	1	28834954	...	111	219	338	3.849495e-06	7.594949e-06	1.172188e-05	-4.931003e+00	...	3	28778763	...	1.042435e-07
TCGA-EE-A3JA-06A-11D-A20D-08	1257	1229	28	781	2.227526e-02	coding only	1	28834954	...	447	772	1256	1.550202e-05	2.677306e-05	4.355825e-05	-4.360930e+00	...	8	28778763	...	2.779828e-07
TCGA-EE-A3JB-06A-11D-A21A-08	779	766	13	513	1.668806e-02	coding only	1	28834954	...	253	505	779	8.774073e-06	1.751347e-05	2.701582e-05	-4.568382e+00	...	8	28778763	...	2.779828e-07
TCGA-EE-A3JD-06A-11D-A20D-08	3772	3717	55	2431	1.458112e-02	coding only	1	28834954	...	1286	2420	3771	4.459865e-05	8.392592e-05	1.307788e-04	-3.883463e+00	...	9	28778763	...	3.127306e-07
TCGA-EE-A3JE-06A-11D-A20D-08	358	356	2	250	5.586592e-03	coding only	1	28834954	...	106	245	358	3.676094e-06	8.496632e-06	1.241549e-05	-4.906036e+00	...	5	28778763	...	1.737392e-07
TCGA-EE-A3JH-06A-11D-A21A-08	242	228	14	143	5.785124e-02	exome+100bp flanks	2	35716780	...	85	142	242	2.379834e-06	3.975722e-06	6.775527e-06	-5.169057e+00	...	1	32008755	...	3.124145e-08
TCGA-EE-A3JI-06A-11D-A21A-08	1469	1431	38	998	2.586794e-02	coding only	1	28834954	...	433	894	1469	1.501650e-05	3.100404e-05	5.094511e-05	-4.292897e+00	...	104	28778763	...	3.613776e-06
TCGA-ER-A193-06A-12D-A197-08	2375	2330	45	1604	1.894737e-02	coding only	1	28834954	...	726	1589	2375	2.517778e-05	5.510673e-05	8.236531e-05	-4.084256e+00	...	14	28778763	...	4.864698e-07
TCGA-ER-A195-06A-11D-A196-08	315	315	0	203	0	coding only	1	28834954	...	112	200	315	3.884175e-06	6.936026e-06	1.092424e-05	-4.961609e+00	...	3	28778763	...	1.042435e-07
TCGA-ER-A197-06A-32D-A197-08	56	54	2	43	3.571429e-02	coding only	1	28834954	...	11	42	56	3.814814e-07	1.456566e-06	1.942087e-06	-5.711731e+00	...	1	28778763	...	3.474785e-08
TCGA-ER-A198-06A-11D-A196-08	585	574	11	390	1.880342e-02	coding only	1	28834954	...	184	388	585	6.381144e-06	1.345589e-05	2.028788e-05	-4.692763e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A199-06A-11D-A197-08	348	338	10	235	2.873563e-02	coding only	1	28834954	...	103	231	348	3.572054e-06	8.011110e-06	1.206869e-05	-4.918340e+00	...	4	28778763	...	1.389914e-07
TCGA-ER-A19A-06A-21D-A197-08	530	522	8	335	1.509434e-02	coding only	1	28834954	...	187	335	530	6.485185e-06	1.161784e-05	1.838047e-05	-4.735643e+00	...	0	28778763	...	0
TCGA-ER-A19B-06A-11D-A196-08	140	140	0	104	0	coding only	1	28834954	...	36	102	140	1.248485e-06	3.537373e-06	4.855218e-06	-5.313791e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A19C-06A-11D-A196-08	118	117	1	67	8.474576e-03	coding only	1	28834954	...	50	67	118	1.734007e-06	2.323569e-06	4.092256e-06	-5.388037e+00	...	0	28778763	...	0
TCGA-ER-A19D-06A-11D-A197-08	574	568	6	360	1.045296e-02	coding only	1	28834954	...	208	357	574	7.213467e-06	1.238081e-05	1.990640e-05	-4.701007e+00	...	3	28778763	...	1.042435e-07
TCGA-ER-A19E-06A-11D-A197-08	558	551	7	379	1.254480e-02	coding only	1	28834954	...	172	372	558	5.964983e-06	1.290101e-05	1.935151e-05	-4.713285e+00	...	7	28778763	...	2.432349e-07
TCGA-ER-A19F-06A-11D-A196-08	1215	1184	31	792	2.551440e-02	coding only	1	28834954	...	392	783	1215	1.359461e-05	2.715454e-05	4.213636e-05	-4.375343e+00	...	9	28778763	...	3.127306e-07
TCGA-ER-A19G-06A-11D-A196-08	649	638	11	412	1.694915e-02	coding only	1	28834954	...	226	400	649	7.837710e-06	1.387205e-05	2.250741e-05	-4.647675e+00	...	12	28778763	...	4.169741e-07
TCGA-ER-A19H-06A-12D-A196-08	330	327	3	210	9.090909e-03	coding only	1	28834954	...	117	208	330	4.057575e-06	7.213467e-06	1.144444e-05	-4.941405e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A19J-06A-11D-A196-08	272	266	6	179	2.205882e-02	coding only	1	28834954	...	87	173	272	3.017171e-06	5.999663e-06	9.432996e-06	-5.025350e+00	...	6	28778763	...	2.084871e-07
TCGA-ER-A19L-06A-12D-A197-08	73	72	1	46	1.369863e-02	coding only	1	28834954	...	26	46	73	9.016834e-07	1.595286e-06	2.531650e-06	-5.596596e+00	...	0	28778763	...	0
TCGA-ER-A19M-06A-61D-A23B-08	609	594	15	382	2.463054e-02	coding only	1	28834954	...	212	380	609	7.352188e-06	1.317845e-05	2.112020e-05	-4.675302e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A19N-06A-11D-A197-08	596	589	7	400	1.174497e-02	coding only	1	28834954	...	189	399	596	6.554545e-06	1.383737e-05	2.066936e-05	-4.684673e+00	...	1	28778763	...	3.474785e-08
TCGA-ER-A19O-06A-11D-A197-08	210	207	3	141	1.428571e-02	coding only	1	28834954	...	66	138	209	2.288889e-06	4.785858e-06	7.248148e-06	-5.139773e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A19P-06A-11D-A196-08	2138	2111	27	1549	1.262862e-02	coding only	1	28834954	...	562	1533	2138	1.949023e-05	5.316464e-05	7.414612e-05	-4.129912e+00	...	15	28778763	...	5.212177e-07
TCGA-ER-A19Q-06A-11D-A197-08	153	151	2	103	1.307190e-02	coding only	1	28834954	...	48	100	153	1.664646e-06	3.468013e-06	5.306060e-06	-5.275228e+00	...	3	28778763	...	1.042435e-07
TCGA-ER-A19S-06A-11D-A196-08	266	261	5	179	1.879699e-02	coding only	1	28834954	...	82	178	266	2.843771e-06	6.173063e-06	9.224915e-06	-5.035038e+00	...	1	28778763	...	3.474785e-08
TCGA-ER-A19T-06A-11D-A19A-08	59	58	1	47	1.694915e-02	coding only	1	28834954	...	11	42	59	3.814814e-07	1.456566e-06	2.046128e-06	-5.689067e+00	...	5	28778763	...	1.737392e-07
TCGA-ER-A19W-06A-41D-A23B-08	442	434	8	269	1.809955e-02	coding only	1	28834954	...	165	263	441	5.722222e-06	9.120875e-06	1.529394e-05	-4.815481e+00	...	4	28778763	...	1.389914e-07
TCGA-ER-A1A1-06A-11D-A197-08	320	315	5	215	1.562500e-02	coding only	1	28834954	...	100	213	320	3.468013e-06	7.386868e-06	1.109764e-05	-4.954769e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A2NC-06A-11D-A197-08	487	476	11	312	2.258727e-02	coding only	1	28834954	...	164	310	487	5.687542e-06	1.075084e-05	1.688922e-05	-4.772390e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A2ND-06A-11D-A196-08	128	127	1	94	7.812500e-03	coding only	1	28834954	...	33	93	128	1.144444e-06	3.225252e-06	4.439057e-06	-5.352709e+00	...	1	28778763	...	3.474785e-08
TCGA-ER-A2NE-06A-21D-A196-08	171	168	3	118	1.754386e-02	coding only	1	28834954	...	50	113	171	1.734007e-06	3.918855e-06	5.930303e-06	-5.226923e+00	...	5	28778763	...	1.737392e-07
TCGA-ER-A2NF-06A-11D-A19A-08	41	40	1	28	2.439024e-02	coding only	1	28834954	...	12	26	41	4.161616e-07	9.016834e-07	1.421885e-06	-5.847135e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A2NG-06A-11D-A196-08	309	309	0	212	0	coding only	1	28834954	...	97	210	309	3.363973e-06	7.282828e-06	1.071616e-05	-4.969961e+00	...	2	28778763	...	6.949569e-08
TCGA-ER-A2NH-06A-11D-A196-08	385	377	8	250	2.077922e-02	coding only	1	28834954	...	126	246	384	4.369697e-06	8.531312e-06	1.331717e-05	-4.875588e+00	...	4	28778763	...	1.389914e-07
TCGA-ER-A3ES-06A-11D-A20D-08	35	35	0	30	0	coding only	1	28834954	...	5	25	35	1.734007e-07	8.670033e-07	1.213805e-06	-5.915851e+00	...	5	28778763	...	1.737392e-07
TCGA-ER-A3ET-06A-11D-A20D-08	120	117	3	91	2.500000e-02	coding only	1	28834954	...	26	87	120	9.016834e-07	3.017171e-06	4.161616e-06	-5.380738e+00	...	4	28778763	...	1.389914e-07
TCGA-ER-A3EV-06A-11D-A20D-08	119	117	2	95	1.680672e-02	coding only	1	28834954	...	22	86	119	7.629629e-07	2.982491e-06	4.126936e-06	-5.384372e+00	...	9	28778763	...	3.127306e-07
TCGA-ER-A3PL-06A-11D-A23B-08	464	455	9	288	1.939655e-02	coding only	1	28834954	...	167	283	463	5.791582e-06	9.814477e-06	1.605690e-05	-4.794338e+00	...	4	28778763	...	1.389914e-07
TCGA-ER-A42K-06A-11D-A24R-08	239	232	7	157	2.928870e-02	coding only	1	28834954	...	75	154	239	2.601010e-06	5.340740e-06	8.288551e-06	-5.081521e+00	...	3	28778763	...	1.042435e-07
TCGA-ER-A42L-06A-11D-A24R-08	1236	1211	25	790	2.022654e-02	coding only	1	28834954	...	421	786	1235	1.460034e-05	2.725858e-05	4.282996e-05	-4.368252e+00	...	3	28778763	...	1.042435e-07
TCGA-FR-A3YN-06A-11D-A23B-08	708	695	13	452	1.836158e-02	coding only	1	28834954	...	243	444	708	8.427272e-06	1.539798e-05	2.455353e-05	-4.609886e+00	...	8	28778763	...	2.779828e-07
TCGA-FR-A3YO-06A-11D-A23B-08	1056	1040	16	680	1.515152e-02	coding only	1	28834954	...	360	676	1055	1.248485e-05	2.344377e-05	3.658754e-05	-4.436667e+00	...	3	28778763	...	1.042435e-07
TCGA-FR-A44A-06A-11D-A24R-08	383	376	7	236	1.827676e-02	coding only	1	28834954	...	140	232	383	4.855218e-06	8.045791e-06	1.328249e-05	-4.876720e+00	...	4	28778763	...	1.389914e-07
TCGA-FR-A69P-06A-21D-A30X-08	268	264	4	184	1.492537e-02	coding only	1	28834954	...	80	181	268	2.774411e-06	6.277104e-06	9.294275e-06	-5.031784e+00	...	3	28778763	...	1.042435e-07
TCGA-FS-A1YW-06A-11D-A197-08	195	192	3	131	1.538462e-02	coding only	1	28834954	...	61	127	195	2.115488e-06	4.404377e-06	6.762626e-06	-5.169885e+00	...	4	28778763	...	1.389914e-07
TCGA-FS-A1YX-06A-11D-A197-08	29	29	0	25	0	coding only	1	28834954	...	4	21	29	1.387205e-07	7.282828e-07	1.005724e-06	-5.997521e+00	...	4	28778763	...	1.389914e-07
TCGA-FS-A1YY-06A-11D-A197-08	251	249	2	159	7.968127e-03	coding only	1	28834954	...	90	156	251	3.121212e-06	5.410101e-06	8.704713e-06	-5.060246e+00	...	3	28778763	...	1.042435e-07
TCGA-FS-A1Z0-06A-11D-A197-08	332	327	5	224	1.506024e-02	coding only	1	28834954	...	103	221	332	3.572054e-06	7.664309e-06	1.151380e-05	-4.938781e+00	...	3	28778763	...	1.042435e-07
TCGA-FS-A1Z3-06A-11D-A197-08	1277	1255	22	849	1.722788e-02	coding only	1	28834954	...	406	841	1277	1.408013e-05	2.916599e-05	4.428653e-05	-4.353728e+00	...	8	28778763	...	2.779828e-07
TCGA-FS-A1Z4-06A-11D-A197-08	52	52	0	39	0	coding only	1	28834954	...	13	35	52	4.508417e-07	1.213805e-06	1.803367e-06	-5.743916e+00	...	4	28778763	...	1.389914e-07
TCGA-FS-A1Z7-06A-11D-A197-08	230	227	3	153	1.304348e-02	coding only	1	28834954	...	74	151	230	2.566330e-06	5.236700e-06	7.976430e-06	-5.098191e+00	...	2	28778763	...	6.949569e-08
TCGA-FS-A1ZA-06A-11D-A197-08	1464	1444	20	963	1.366120e-02	coding only	1	28834954	...	481	956	1464	1.668114e-05	3.315421e-05	5.077171e-05	-4.294378e+00	...	7	28778763	...	2.432349e-07
TCGA-FS-A1ZB-06A-12D-A197-08	297	293	4	195	1.346801e-02	coding only	1	28834954	...	98	194	297	3.398653e-06	6.727946e-06	1.030000e-05	-4.987163e+00	...	1	28778763	...	3.474785e-08
TCGA-FS-A1ZC-06A-11D-A197-08	882	868	14	555	1.587302e-02	coding only	1	28834954	...	313	550	881	1.085488e-05	1.907407e-05	3.055320e-05	-4.514943e+00	...	4	28778763	...	1.389914e-07
TCGA-FS-A1ZD-06A-11D-A197-08	311	306	5	216	1.607717e-02	coding only	1	28834954	...	90	209	311	3.121212e-06	7.248148e-06	1.078552e-05	-4.967159e+00	...	7	28778763	...	2.432349e-07
TCGA-FS-A1ZE-06A-11D-A197-08	181	178	3	123	1.657459e-02	coding only	1	28834954	...	55	115	181	1.907407e-06	3.988215e-06	6.277104e-06	-5.202241e+00	...	8	28778763	...	2.779828e-07
TCGA-FS-A1ZF-06A-12D-A197-08	251	247	4	163	1.593625e-02	coding only	1	28834954	...	84	162	251	2.913131e-06	5.618181e-06	8.704713e-06	-5.060246e+00	...	1	28778763	...	3.474785e-08
TCGA-FS-A1ZG-06A-11D-A197-08	45	45	0	30	0	coding only	1	28834954	...	15	27	45	5.202020e-07	9.363636e-07	1.560606e-06	-5.806707e+00	...	3	28778763	...	1.042435e-07
TCGA-FS-A1ZH-06A-11D-A197-08	39	39	0	29	0	coding only	1	28834954	...	10	27	39	3.468013e-07	9.363636e-07	1.352525e-06	-5.868855e+00	...	2	28778763	...	6.949569e-08
TCGA-FS-A1ZJ-06A-12D-A197-08	80	79	1	58	1.250000e-02	coding only	1	28834954	...	21	55	80	7.282828e-07	1.907407e-06	2.774411e-06	-5.556829e+00	...	3	28778763	...	1.042435e-07
TCGA-FS-A1ZK-06A-11D-A197-08	1999	1972	27	1275	1.350675e-02	coding only	1	28834954	...	697	1265	1999	2.417205e-05	4.387037e-05	6.932558e-05	-4.159106e+00	...	8	28778763	...	2.779828e-07
TCGA-FS-A1ZM-06A-12D-A197-08	313	306	7	208	2.236422e-02	coding only	1	28834954	...	98	206	313	3.398653e-06	7.144107e-06	1.085488e-05	-4.964375e+00	...	2	28778763	...	6.949569e-08
TCGA-FS-A1ZP-06A-11D-A197-08	531	525	6	339	1.129944e-02	coding only	1	28834954	...	186	337	531	6.450504e-06	1.168720e-05	1.841515e-05	-4.734825e+00	...	2	28778763	...	6.949569e-08
TCGA-FS-A1ZQ-06A-11D-A197-08	622	618	4	395	6.430868e-03	coding only	1	28834954	...	223	393	621	7.733669e-06	1.362929e-05	2.153636e-05	-4.666828e+00	...	1	28778763	...	3.474785e-08
TCGA-FS-A1ZR-06A-21D-A197-08	171	170	1	117	5.847953e-03	coding only	1	28834954	...	53	115	171	1.838047e-06	3.988215e-06	5.930303e-06	-5.226923e+00	...	2	28778763	...	6.949569e-08
TCGA-FS-A1ZS-06A-12D-A197-08	359	356	3	218	8.356546e-03	coding only	1	28834954	...	138	213	359	4.785858e-06	7.386868e-06	1.245017e-05	-4.904825e+00	...	5	28778763	...	1.737392e-07
TCGA-FS-A1ZT-06A-11D-A197-08	208	201	7	138	3.365385e-02	exome+100bp flanks	2	35716780	...	63	135	208	1.763877e-06	3.779736e-06	5.823593e-06	-5.234809e+00	...	3	32008755	...	9.372436e-08
TCGA-FS-A1ZU-06A-12D-A196-08	57	56	1	40	1.754386e-02	coding only	1	28834954	...	16	36	57	5.548821e-07	1.248485e-06	1.976768e-06	-5.704044e+00	...	4	28778763	...	1.389914e-07
TCGA-FS-A1ZW-06A-12D-A197-08	803	797	6	540	7.471980e-03	coding only	1	28834954	...	257	536	802	8.912794e-06	1.858855e-05	2.781347e-05	-4.555745e+00	...	3	28778763	...	1.042435e-07
TCGA-FS-A1ZY-06A-11D-A197-08	38	37	1	24	2.631579e-02	coding only	1	28834954	...	13	24	38	4.508417e-07	8.323232e-07	1.317845e-06	-5.880136e+00	...	0	28778763	...	0
TCGA-FS-A1ZZ-06A-11D-A197-08	1910	1873	37	1202	1.937173e-02	coding only	1	28834954	...	671	1195	1909	2.327037e-05	4.144276e-05	6.620437e-05	-4.179113e+00	...	6	28778763	...	2.084871e-07
TCGA-FS-A4F0-06A-11D-A24R-08	628	617	11	442	1.751592e-02	coding only	1	28834954	...	175	434	627	6.069023e-06	1.505118e-05	2.174444e-05	-4.662652e+00	...	7	28778763	...	2.432349e-07
TCGA-FS-A4F4-06A-12D-A25O-08	55	53	2	37	3.636364e-02	coding only	1	28834954	...	16	33	55	5.548821e-07	1.144444e-06	1.907407e-06	-5.719557e+00	...	4	28778763	...	1.389914e-07
TCGA-FS-A4F5-06A-11D-A25O-08	936	920	16	632	1.709402e-02	coding only	1	28834954	...	288	626	935	9.987878e-06	2.170976e-05	3.242592e-05	-4.489108e+00	...	5	28778763	...	1.737392e-07
TCGA-FS-A4F8-06A-11D-A25O-08	220	217	3	154	1.363636e-02	coding only	1	28834954	...	63	153	220	2.184848e-06	5.306060e-06	7.629629e-06	-5.117497e+00	...	1	28778763	...	3.474785e-08
TCGA-FS-A4F9-06A-11D-A24R-08	557	543	14	367	2.513465e-02	coding only	1	28834954	...	176	332	556	6.103703e-06	1.151380e-05	1.928215e-05	-4.714844e+00	...	34	28778763	...	1.181427e-06
TCGA-FS-A4FB-06A-11D-A25O-08	226	225	1	158	4.424779e-03	coding only	1	28834954	...	67	153	226	2.323569e-06	5.306060e-06	7.837710e-06	-5.105811e+00	...	5	28778763	...	1.737392e-07
TCGA-FS-A4FC-06A-11D-A24R-08	875	863	12	587	1.371429e-02	coding only	1	28834954	...	275	583	874	9.537036e-06	2.021852e-05	3.031044e-05	-4.518408e+00	...	4	28778763	...	1.389914e-07
TCGA-FS-A4FD-06A-11D-A25O-08	558	550	8	372	1.433692e-02	coding only	1	28834954	...	178	368	558	6.173063e-06	1.276229e-05	1.935151e-05	-4.713285e+00	...	3	28778763	...	1.042435e-07
TCGA-FW-A3I3-06A-11D-A21A-08	85	83	2	57	2.352941e-02	coding only	1	28834954	...	26	48	85	9.016834e-07	1.664646e-06	2.947811e-06	-5.530500e+00	...	9	28778763	...	3.127306e-07
TCGA-FW-A3R5-06A-11D-A23B-08	24930	24534	396	15598	1.588448e-02	coding only	1	28834954	...	8933	15570	24915	3.097976e-04	5.399696e-04	8.640555e-04	-3.063458e+00	...	13	28778763	...	4.517220e-07
TCGA-FW-A3TU-06A-11D-A23B-08	965	950	15	623	1.554404e-02	coding only	1	28834954	...	327	615	964	1.134040e-05	2.132828e-05	3.343165e-05	-4.475842e+00	...	7	28778763	...	2.432349e-07
TCGA-FW-A3TV-06A-11D-A23B-08	413	405	8	264	1.937046e-02	coding only	1	28834954	...	141	263	413	4.889899e-06	9.120875e-06	1.432289e-05	-4.843969e+00	...	1	28778763	...	3.474785e-08
TCGA-FW-A5DY-06A-11D-A30X-08	293	287	6	190	2.047782e-02	coding only	1	28834954	...	97	189	293	3.363973e-06	6.554545e-06	1.016128e-05	-4.993052e+00	...	1	28778763	...	3.474785e-08
TCGA-GF-A3OT-06A-23D-A23B-08	673	666	7	439	1.040119e-02	coding only	1	28834954	...	227	433	673	7.872390e-06	1.501650e-05	2.333973e-05	-4.631904e+00	...	5	28778763	...	1.737392e-07
TCGA-GF-A4EO-06A-12D-A24R-08	302	299	3	206	9.933775e-03	coding only	1	28834954	...	93	199	302	3.225252e-06	6.901346e-06	1.047340e-05	-4.979912e+00	...	7	28778763	...	2.432349e-07
TCGA-GF-A6C8-06A-12D-A30X-08	471	464	7	313	1.486200e-02	coding only	1	28834954	...	151	310	471	5.236700e-06	1.075084e-05	1.633434e-05	-4.786898e+00	...	3	28778763	...	1.042435e-07
TCGA-GF-A6C9-06A-11D-A30X-08	4201	4141	60	2675	1.428231e-02	coding only	1	28834954	...	1466	2659	4200	5.084107e-05	9.221447e-05	1.456566e-04	-3.836670e+00	...	15	28778763	...	5.212177e-07
TCGA-GN-A262-06A-11D-A196-08	445	434	11	294	2.471910e-02	coding only	1	28834954	...	140	288	445	4.855218e-06	9.987878e-06	1.543266e-05	-4.811559e+00	...	6	28778763	...	2.084871e-07
TCGA-GN-A264-06A-11D-A196-08	60	56	4	43	6.666667e-02	coding only	1	28834954	...	13	36	60	4.508417e-07	1.248485e-06	2.080808e-06	-5.681768e+00	...	7	28778763	...	2.432349e-07
TCGA-GN-A265-06A-21D-A197-08	327	323	4	234	1.223242e-02	coding only	1	28834954	...	89	227	327	3.086532e-06	7.872390e-06	1.134040e-05	-4.945372e+00	...	7	28778763	...	2.432349e-07
TCGA-GN-A266-06A-11D-A197-08	4843	4766	77	3092	1.589924e-02	coding only	1	28834954	...	1674	3077	4842	5.805454e-05	1.067108e-04	1.679212e-04	-3.774894e+00	...	13	28778763	...	4.517220e-07
TCGA-GN-A267-06A-21D-A196-08	526	513	13	335	2.471483e-02	coding only	1	28834954	...	178	327	526	6.173063e-06	1.134040e-05	1.824175e-05	-4.738934e+00	...	8	28778763	...	2.779828e-07
TCGA-GN-A268-06A-11D-A196-08	429	417	12	286	2.797203e-02	coding only	1	28834954	...	131	282	429	4.543097e-06	9.779797e-06	1.487778e-05	-4.827462e+00	...	4	28778763	...	1.389914e-07
TCGA-GN-A26A-06A-11D-A19A-08	411	406	5	274	1.216545e-02	coding only	1	28834954	...	132	271	411	4.577777e-06	9.398316e-06	1.425353e-05	-4.846077e+00	...	3	28778763	...	1.042435e-07
TCGA-GN-A26D-06A-11D-A19A-08	58	58	0	45	0	coding only	1	28834954	...	13	42	58	4.508417e-07	1.456566e-06	2.011448e-06	-5.696491e+00	...	3	28778763	...	1.042435e-07
TCGA-GN-A4U3-06A-11D-A32N-08	396	385	11	250	2.777778e-02	coding only	1	28834954	...	134	248	395	4.647138e-06	8.600673e-06	1.369865e-05	-4.863322e+00	...	2	28778763	...	6.949569e-08
TCGA-GN-A4U4-06A-11D-A32N-08	839	826	13	557	1.549464e-02	coding only	1	28834954	...	269	550	839	9.328955e-06	1.907407e-05	2.909663e-05	-4.536157e+00	...	7	28778763	...	2.432349e-07
TCGA-GN-A4U7-06A-21D-A32N-08	327	327	0	213	0	coding only	1	28834954	...	114	205	327	3.953535e-06	7.109427e-06	1.134040e-05	-4.945372e+00	...	8	28778763	...	2.779828e-07
TCGA-GN-A4U8-06A-11D-A32N-08	474	463	11	324	2.320675e-02	coding only	1	28834954	...	139	316	474	4.820538e-06	1.095892e-05	1.643838e-05	-4.784141e+00	...	7	28778763	...	2.432349e-07
TCGA-GN-A4U9-06A-11D-A32N-08	83	82	1	62	1.204819e-02	coding only	1	28834954	...	20	61	83	6.936026e-07	2.115488e-06	2.878451e-06	-5.540841e+00	...	1	28778763	...	3.474785e-08
TCGA-OD-A75X-06A-12D-A32N-08	1264	1249	15	844	1.186709e-02	coding only	1	28834954	...	405	835	1263	1.404545e-05	2.895791e-05	4.380101e-05	-4.358516e+00	...	8	28778763	...	2.779828e-07
TCGA-QB-A6FS-06A-11D-A30X-08	1432	1412	20	933	1.396648e-02	coding only	1	28834954	...	479	930	1430	1.661178e-05	3.225252e-05	4.959259e-05	-4.304583e+00	...	2	28778763	...	6.949569e-08
TCGA-RP-A690-06A-11D-A30X-08	19	19	0	15	0	coding only	1	28834954	...	4	14	19	1.387205e-07	4.855218e-07	6.589225e-07	-6.181166e+00	...	1	28778763	...	3.474785e-08
TCGA-RP-A693-06A-13D-A30X-08	988	977	11	665	1.113360e-02	coding only	1	28834954	...	312	658	987	1.082020e-05	2.281953e-05	3.422929e-05	-4.465602e+00	...	5	28778763	...	1.737392e-07
TCGA-RP-A694-06A-11D-A30X-08	849	835	14	556	1.648999e-02	coding only	1	28834954	...	279	553	849	9.675757e-06	1.917811e-05	2.944343e-05	-4.531012e+00	...	3	28778763	...	1.042435e-07
TCGA-RP-A695-06A-11D-A30X-08	1054	1033	21	697	1.992410e-02	coding only	1	28834954	...	335	688	1052	1.161784e-05	2.385993e-05	3.648350e-05	-4.437904e+00	...	8	28778763	...	2.779828e-07
