name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-B7-5816-01A-21D-1600-08	1583	1567	16	1265	1.010739e-02	coding only	1	28836835	...	302	994	1583	1.047272e-05	3.446980e-05	5.489507e-05	-4.260467e+00	...	271	28780638	...	9.416053e-06
TCGA-B7-5818-01A-11D-1600-08	421	413	8	325	1.900238e-02	coding only	1	28836835	...	88	313	421	3.051653e-06	1.085417e-05	1.459938e-05	-4.835665e+00	...	12	28780638	...	4.169470e-07
TCGA-B7-A5TI-01A-11D-A31L-08	725	714	11	556	1.517241e-02	coding only	1	28836835	...	158	443	725	5.479103e-06	1.536230e-05	2.514146e-05	-4.599610e+00	...	113	28780638	...	3.926251e-06
TCGA-B7-A5TJ-01A-11D-A31L-08	295	291	4	214	1.355932e-02	coding only	1	28836835	...	77	189	295	2.670196e-06	6.554117e-06	1.022997e-05	-4.990126e+00	...	24	28780638	...	8.338940e-07
TCGA-B7-A5TK-01A-12D-A31L-08	66	65	1	46	1.515152e-02	coding only	1	28836835	...	19	43	66	6.588795e-07	1.491148e-06	2.288739e-06	-5.640404e+00	...	3	28780638	...	1.042367e-07
TCGA-B7-A5TN-01A-21D-A31L-08	104	102	2	78	1.923077e-02	coding only	1	28836835	...	24	68	104	8.322689e-07	2.358095e-06	3.606498e-06	-5.442914e+00	...	10	28780638	...	3.474558e-07
TCGA-BR-4183-01A-02D-1126-08	52	52	0	36	0	coding only	1	28836835	...	16	35	52	5.548459e-07	1.213725e-06	1.803249e-06	-5.743944e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-4184-01A-01D-1126-08	4610	4559	51	3424	1.106291e-02	coding only	1	28836835	...	1133	3014	4604	3.929003e-05	1.045191e-04	1.596569e-04	-3.796812e+00	...	406	28780638	...	1.410671e-05
TCGA-BR-4187-01A-01D-1126-08	33	33	0	25	0	coding only	1	28836835	...	8	24	33	2.774230e-07	8.322689e-07	1.144370e-06	-5.941434e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-4188-01A-01D-1126-08	84	82	2	64	2.380952e-02	coding only	1	28836835	...	18	62	84	6.242017e-07	2.150028e-06	2.912941e-06	-5.535668e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-4191-01A-02D-1126-08	225	219	6	175	2.666667e-02	coding only	1	28836835	...	44	161	224	1.525826e-06	5.583137e-06	7.767843e-06	-5.109700e+00	...	13	28780638	...	4.516926e-07
TCGA-BR-4201-01A-01D-1126-08	1765	1734	31	1363	1.756374e-02	coding only	1	28836835	...	371	995	1764	1.286549e-05	3.450448e-05	6.117176e-05	-4.213449e+00	...	367	28780638	...	1.275163e-05
TCGA-BR-4253-01A-01D-1126-08	104	104	0	77	0	coding only	1	28836835	...	26	72	103	9.016246e-07	2.496807e-06	3.571821e-06	-5.447110e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-4255-01A-01D-1126-08	70	66	4	46	5.714286e-02	coding only	1	28836835	...	20	44	70	6.935574e-07	1.525826e-06	2.427451e-06	-5.614850e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-4256-01A-01D-1126-08	1241	1229	12	943	9.669621e-03	coding only	1	28836835	...	284	751	1239	9.848515e-06	2.604308e-05	4.296588e-05	-4.366876e+00	...	191	28780638	...	6.636406e-06
TCGA-BR-4257-01A-01D-1126-08	1334	1312	22	962	1.649175e-02	coding only	1	28836835	...	348	771	1332	1.206790e-05	2.673664e-05	4.619092e-05	-4.335443e+00	...	191	28780638	...	6.636406e-06
TCGA-BR-4267-01A-01D-1126-08	109	108	1	81	9.174312e-03	coding only	1	28836835	...	27	77	108	9.363025e-07	2.670196e-06	3.745210e-06	-5.426524e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-4279-01A-01D-1126-08	63	62	1	38	1.587302e-02	coding only	1	28836835	...	24	33	63	8.322689e-07	1.144370e-06	2.184706e-06	-5.660607e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-4280-01A-01D-1126-08	821	808	13	644	1.583435e-02	coding only	1	28836835	...	163	492	819	5.652493e-06	1.706151e-05	2.840118e-05	-4.546664e+00	...	151	28780638	...	5.246583e-06
TCGA-BR-4292-01A-01D-1126-08	1623	1595	28	1217	1.725200e-02	coding only	1	28836835	...	377	910	1618	1.307356e-05	3.155686e-05	5.610879e-05	-4.250969e+00	...	304	28780638	...	1.056266e-05
TCGA-BR-4294-01A-01D-1126-08	35	34	1	27	2.857143e-02	coding only	1	28836835	...	7	26	35	2.427451e-07	9.016246e-07	1.213725e-06	-5.915880e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-4357-01A-01D-1158-08	249	245	4	193	1.606426e-02	coding only	1	28836835	...	52	185	249	1.803249e-06	6.415406e-06	8.634789e-06	-5.063748e+00	...	8	28780638	...	2.779647e-07
TCGA-BR-4361-01A-01D-1158-08	3043	2986	57	2285	1.873151e-02	coding only	1	28836835	...	700	1890	3042	2.427451e-05	6.554117e-05	1.054901e-04	-3.976788e+00	...	395	28780638	...	1.372450e-05
TCGA-BR-4362-01A-01D-1158-08	1829	1790	39	1405	2.132313e-02	coding only	1	28836835	...	385	1050	1829	1.335098e-05	3.641176e-05	6.342582e-05	-4.197734e+00	...	355	28780638	...	1.233468e-05
TCGA-BR-4363-01A-01D-1158-08	676	666	10	530	1.479290e-02	coding only	1	28836835	...	136	364	676	4.716190e-06	1.262274e-05	2.344224e-05	-4.630001e+00	...	166	28780638	...	5.767767e-06
TCGA-BR-4366-01A-01D-1158-08	151	149	2	113	1.324503e-02	coding only	1	28836835	...	36	111	151	1.248403e-06	3.849244e-06	5.236358e-06	-5.280971e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-4368-01A-01D-1158-08	1558	1536	22	1175	1.412067e-02	coding only	1	28836835	...	361	908	1558	1.251871e-05	3.148751e-05	5.402812e-05	-4.267380e+00	...	267	28780638	...	9.277070e-06
TCGA-BR-4369-01A-01D-1158-08	191	189	2	144	1.047120e-02	coding only	1	28836835	...	45	142	191	1.560504e-06	4.924257e-06	6.623473e-06	-5.178914e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-4370-01A-01D-1158-08	1315	1295	20	1004	1.520913e-02	coding only	1	28836835	...	291	763	1315	1.009126e-05	2.645921e-05	4.560140e-05	-4.341022e+00	...	241	28780638	...	8.373685e-06
TCGA-BR-4371-01A-01D-1158-08	174	173	1	127	5.747126e-03	coding only	1	28836835	...	46	127	174	1.595182e-06	4.404089e-06	6.033949e-06	-5.219398e+00	...	0	28780638	...	0
TCGA-BR-6452-01A-12D-1800-08	8303	8174	129	6330	1.553655e-02	coding only	1	28836835	...	1844	5542	8302	6.394599e-05	1.921848e-04	2.878957e-04	-3.540765e+00	...	787	28780638	...	2.734477e-05
TCGA-BR-6453-01A-11D-1800-08	211	209	2	160	9.478673e-03	coding only	1	28836835	...	49	158	210	1.699216e-06	5.479103e-06	7.282353e-06	-5.137728e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-6454-01A-11D-1800-08	161	159	2	121	1.242236e-02	coding only	1	28836835	...	38	116	161	1.317759e-06	4.022633e-06	5.583137e-06	-5.253122e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-6455-01A-11D-1800-08	110	106	4	74	3.636364e-02	coding only	1	28836835	...	32	72	110	1.109692e-06	2.496807e-06	3.814566e-06	-5.418555e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6456-01A-11D-1800-08	48	47	1	33	2.083333e-02	coding only	1	28836835	...	14	30	48	4.854902e-07	1.040336e-06	1.664538e-06	-5.778706e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-6457-01A-21D-1800-08	130	128	2	94	1.538462e-02	coding only	1	28836835	...	34	92	130	1.179048e-06	3.190364e-06	4.508123e-06	-5.346004e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6458-01A-11D-1800-08	327	322	5	251	1.529052e-02	coding only	1	28836835	...	71	245	327	2.462129e-06	8.496078e-06	1.133966e-05	-4.945400e+00	...	6	28780638	...	2.084735e-07
TCGA-BR-6563-01A-13D-2053-08	89	89	0	69	0	coding only	1	28836835	...	20	68	89	6.935574e-07	2.358095e-06	3.086330e-06	-5.510558e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-6564-01A-12D-1882-08	38	35	3	27	7.894737e-02	coding only	1	28836835	...	8	22	38	2.774230e-07	7.629131e-07	1.317759e-06	-5.880164e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-6565-01A-11D-1800-08	162	159	3	129	1.851852e-02	coding only	1	28836835	...	30	127	162	1.040336e-06	4.404089e-06	5.617815e-06	-5.250433e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6566-01A-11D-1800-08	1092	1069	23	822	2.106227e-02	coding only	1	28836835	...	247	645	1091	8.565434e-06	2.236723e-05	3.783356e-05	-4.422123e+00	...	176	28780638	...	6.115222e-06
TCGA-BR-6705-01A-12D-1882-08	114	112	2	87	1.754386e-02	coding only	1	28836835	...	25	85	114	8.669467e-07	2.947619e-06	3.953277e-06	-5.403043e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6706-01A-11D-1882-08	226	224	2	181	8.849558e-03	coding only	1	28836835	...	43	176	226	1.491148e-06	6.103305e-06	7.837198e-06	-5.105839e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-6707-01A-11D-1882-08	75	74	1	59	1.333333e-02	coding only	1	28836835	...	15	57	75	5.201680e-07	1.976639e-06	2.600840e-06	-5.584886e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6709-01A-11D-1882-08	44	43	1	35	2.272727e-02	coding only	1	28836835	...	8	34	44	2.774230e-07	1.179048e-06	1.525826e-06	-5.816495e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-6710-01A-11D-1882-08	5	5	0	4	0	coding only	1	28836835	...	1	3	5	3.467787e-08	1.040336e-07	1.733893e-07	-6.760978e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-6801-01A-11D-1882-08	55	55	0	40	0	coding only	1	28836835	...	15	38	55	5.201680e-07	1.317759e-06	1.907283e-06	-5.719585e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6802-01A-11D-1882-08	577	570	7	427	1.213172e-02	coding only	1	28836835	...	143	338	577	4.958935e-06	1.172112e-05	2.000913e-05	-4.698772e+00	...	89	28780638	...	3.092357e-06
TCGA-BR-6803-01A-11D-1882-08	21	21	0	15	0	coding only	1	28836835	...	6	13	21	2.080672e-07	4.508123e-07	7.282353e-07	-6.137728e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-6852-01A-11D-1882-08	1319	1305	14	1025	1.061410e-02	coding only	1	28836835	...	280	784	1319	9.709803e-06	2.718745e-05	4.574011e-05	-4.339703e+00	...	241	28780638	...	8.373685e-06
TCGA-BR-7196-01A-11D-2053-08	83	80	3	62	3.614458e-02	coding only	1	28836835	...	18	59	83	6.242017e-07	2.045994e-06	2.878263e-06	-5.540870e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-7197-01A-11D-2201-08	225	221	4	172	1.777778e-02	coding only	1	28836835	...	49	167	225	1.699216e-06	5.791204e-06	7.802521e-06	-5.107765e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-7703-01A-11D-2053-08	849	839	10	653	1.177856e-02	coding only	1	28836835	...	186	518	849	6.450084e-06	1.796314e-05	2.944151e-05	-4.531040e+00	...	135	28780638	...	4.690653e-06
TCGA-BR-7704-01A-11D-2053-08	399	390	9	308	2.255639e-02	coding only	1	28836835	...	82	296	399	2.843585e-06	1.026465e-05	1.383647e-05	-4.858975e+00	...	12	28780638	...	4.169470e-07
TCGA-BR-7707-01A-11D-2053-08	1743	1724	19	1326	1.090075e-02	coding only	1	28836835	...	398	1053	1743	1.380179e-05	3.651580e-05	6.044353e-05	-4.218650e+00	...	273	28780638	...	9.485544e-06
TCGA-BR-7715-01A-11D-2053-08	158	155	3	122	1.898734e-02	coding only	1	28836835	...	33	115	158	1.144370e-06	3.987955e-06	5.479103e-06	-5.261291e+00	...	6	28780638	...	2.084735e-07
TCGA-BR-7716-01A-21D-2053-08	198	197	1	156	5.050505e-03	coding only	1	28836835	...	41	153	198	1.421793e-06	5.305714e-06	6.866218e-06	-5.163282e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-7717-01A-11D-2053-08	166	164	2	115	1.204819e-02	coding only	1	28836835	...	49	111	166	1.699216e-06	3.849244e-06	5.756526e-06	-5.239840e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-7722-01A-31D-2201-08	55	53	2	40	3.636364e-02	coding only	1	28836835	...	13	38	55	4.508123e-07	1.317759e-06	1.907283e-06	-5.719585e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-7723-01A-11D-2053-08	192	184	8	135	4.166667e-02	exome+100bp flanks	2	35877302	...	49	129	191	1.365766e-06	3.595588e-06	5.323700e-06	-5.273786e+00	...	5	32156043	...	1.554918e-07
TCGA-BR-7851-01A-11D-2201-08	1787	1763	24	1339	1.343033e-02	coding only	1	28836835	...	423	1028	1785	1.466874e-05	3.564885e-05	6.190000e-05	-4.208309e+00	...	311	28780638	...	1.080588e-05
TCGA-BR-7901-01A-11D-2201-08	215	210	5	150	2.325581e-02	coding only	1	28836835	...	60	146	215	2.080672e-06	5.062969e-06	7.455742e-06	-5.127509e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-7957-01A-11D-2201-08	63	62	1	52	1.587302e-02	coding only	1	28836835	...	10	49	63	3.467787e-07	1.699216e-06	2.184706e-06	-5.660607e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-7958-01A-21D-2340-08	193	187	6	151	3.108808e-02	exome+100bp flanks	2	35877302	...	36	147	193	1.003420e-06	4.097298e-06	5.379446e-06	-5.269262e+00	...	4	32156043	...	1.243934e-07
TCGA-BR-7959-01A-11D-2340-08	114	112	2	92	1.754386e-02	coding only	1	28836835	...	20	91	114	6.935574e-07	3.155686e-06	3.953277e-06	-5.403043e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8058-01A-31D-2340-08	66	64	2	52	3.030303e-02	coding only	1	28836835	...	12	52	66	4.161344e-07	1.803249e-06	2.288739e-06	-5.640404e+00	...	0	28780638	...	0
TCGA-BR-8059-01A-11D-2340-08	887	878	9	691	1.014656e-02	coding only	1	28836835	...	187	585	887	6.484762e-06	2.028655e-05	3.075927e-05	-4.512024e+00	...	106	28780638	...	3.683032e-06
TCGA-BR-8060-01A-11D-2340-08	238	237	1	173	4.201681e-03	coding only	1	28836835	...	64	168	238	2.219384e-06	5.825882e-06	8.253333e-06	-5.083371e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-8077-01A-11D-2340-08	152	151	1	116	6.578947e-03	coding only	1	28836835	...	35	112	152	1.213725e-06	3.883921e-06	5.271036e-06	-5.278104e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8078-01A-11D-2340-08	1952	1916	36	1534	1.844262e-02	coding only	1	28836835	...	382	1052	1951	1.324695e-05	3.648112e-05	6.765652e-05	-4.169690e+00	...	482	28780638	...	1.674737e-05
TCGA-BR-8080-01A-11D-2340-08	208	205	3	162	1.442308e-02	coding only	1	28836835	...	43	160	208	1.491148e-06	5.548459e-06	7.212997e-06	-5.141884e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8081-01A-11D-2340-08	1178	1161	17	879	1.443124e-02	coding only	1	28836835	...	282	683	1178	9.779159e-06	2.368498e-05	4.085053e-05	-4.388802e+00	...	194	28780638	...	6.740643e-06
TCGA-BR-8284-01A-11D-2340-08	446	440	6	339	1.345291e-02	coding only	1	28836835	...	101	299	446	3.502465e-06	1.036868e-05	1.546633e-05	-4.810613e+00	...	40	28780638	...	1.389823e-06
TCGA-BR-8285-01A-11D-2340-08	107	105	2	82	1.869159e-02	coding only	1	28836835	...	23	79	107	7.975910e-07	2.739552e-06	3.710532e-06	-5.430564e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-8286-01A-12D-2340-08	167	165	2	114	1.197605e-02	coding only	1	28836835	...	51	106	166	1.768571e-06	3.675854e-06	5.756526e-06	-5.239840e+00	...	8	28780638	...	2.779647e-07
TCGA-BR-8289-01A-11D-2340-08	241	238	3	193	1.244813e-02	coding only	1	28836835	...	45	185	241	1.560504e-06	6.415406e-06	8.357367e-06	-5.077931e+00	...	8	28780638	...	2.779647e-07
TCGA-BR-8291-01A-11D-2340-08	40	38	2	33	5.000000e-02	coding only	1	28836835	...	5	31	40	1.733893e-07	1.075014e-06	1.387115e-06	-5.857888e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8295-01A-11D-2340-08	82	77	5	57	6.097561e-02	coding only	1	28836835	...	20	51	82	6.935574e-07	1.768571e-06	2.843585e-06	-5.546134e+00	...	6	28780638	...	2.084735e-07
TCGA-BR-8297-01A-12D-2340-08	269	265	4	207	1.486989e-02	coding only	1	28836835	...	58	196	269	2.011316e-06	6.796862e-06	9.328347e-06	-5.030195e+00	...	11	28780638	...	3.822014e-07
TCGA-BR-8360-01A-11D-2340-08	1154	1139	15	867	1.299827e-02	coding only	1	28836835	...	272	660	1154	9.432380e-06	2.288739e-05	4.001826e-05	-4.397742e+00	...	206	28780638	...	7.157590e-06
TCGA-BR-8361-01A-11D-2340-08	1849	1819	30	1402	1.622499e-02	coding only	1	28836835	...	417	1094	1847	1.446067e-05	3.793759e-05	6.405002e-05	-4.193481e+00	...	306	28780638	...	1.063215e-05
TCGA-BR-8363-01A-11D-2340-08	1521	1488	33	1180	2.169625e-02	coding only	1	28836835	...	308	878	1521	1.068078e-05	3.044717e-05	5.274504e-05	-4.277818e+00	...	302	28780638	...	1.049317e-05
TCGA-BR-8364-01A-11D-2340-08	27	26	1	23	3.703704e-02	coding only	1	28836835	...	3	21	27	1.040336e-07	7.282353e-07	9.363025e-07	-6.028584e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8365-01A-21D-2340-08	43	43	0	34	0	coding only	1	28836835	...	9	32	43	3.121008e-07	1.109692e-06	1.491148e-06	-5.826479e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-8366-01A-11D-2340-08	222	218	4	178	1.801802e-02	coding only	1	28836835	...	40	177	222	1.387115e-06	6.137983e-06	7.698487e-06	-5.113595e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8367-01A-11D-2340-08	87	86	1	67	1.149425e-02	coding only	1	28836835	...	19	63	87	6.588795e-07	2.184706e-06	3.016975e-06	-5.520428e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8368-01A-11D-2340-08	1268	1245	23	941	1.813880e-02	coding only	1	28836835	...	304	684	1267	1.054207e-05	2.371966e-05	4.393686e-05	-4.357171e+00	...	255	28780638	...	8.860123e-06
TCGA-BR-8369-01A-11D-2340-08	236	233	3	186	1.271186e-02	coding only	1	28836835	...	47	177	236	1.629860e-06	6.137983e-06	8.183977e-06	-5.087036e+00	...	9	28780638	...	3.127102e-07
TCGA-BR-8370-01A-11D-2340-08	148	148	0	106	0	coding only	1	28836835	...	42	99	148	1.456471e-06	3.433109e-06	5.132325e-06	-5.289686e+00	...	7	28780638	...	2.432191e-07
TCGA-BR-8371-01A-11D-2340-08	46	46	0	33	0	coding only	1	28836835	...	13	33	46	4.508123e-07	1.144370e-06	1.595182e-06	-5.797190e+00	...	0	28780638	...	0
TCGA-BR-8372-01A-11D-2340-08	1608	1586	22	1227	1.368159e-02	coding only	1	28836835	...	358	940	1606	1.241468e-05	3.259720e-05	5.569266e-05	-4.254202e+00	...	285	28780638	...	9.902491e-06
TCGA-BR-8373-01A-11D-2340-08	112	111	1	76	8.928571e-03	coding only	1	28836835	...	35	68	112	1.213725e-06	2.358095e-06	3.883921e-06	-5.410730e+00	...	8	28780638	...	2.779647e-07
TCGA-BR-8380-01A-11D-2340-08	97	96	1	78	1.030928e-02	coding only	1	28836835	...	18	74	97	6.242017e-07	2.566162e-06	3.363753e-06	-5.473176e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8381-01A-11D-2394-08	145	144	1	102	6.896552e-03	coding only	1	28836835	...	42	101	145	1.456471e-06	3.502465e-06	5.028291e-06	-5.298580e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8382-01A-11D-2394-08	1157	1138	19	881	1.642178e-02	coding only	1	28836835	...	257	677	1157	8.912212e-06	2.347692e-05	4.012229e-05	-4.396614e+00	...	204	28780638	...	7.088099e-06
TCGA-BR-8384-01A-21D-2394-08	58	57	1	46	1.724138e-02	coding only	1	28836835	...	11	44	57	3.814566e-07	1.525826e-06	1.976639e-06	-5.704073e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8483-01A-31D-2394-08	143	143	0	111	0	coding only	1	28836835	...	32	101	143	1.109692e-06	3.502465e-06	4.958935e-06	-5.304612e+00	...	10	28780638	...	3.474558e-07
TCGA-BR-8484-01A-11D-2394-08	108	107	1	67	9.259259e-03	coding only	1	28836835	...	40	65	108	1.387115e-06	2.254062e-06	3.745210e-06	-5.426524e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8485-01A-11D-2394-08	360	358	2	280	5.555556e-03	coding only	1	28836835	...	78	273	360	2.704874e-06	9.467058e-06	1.248403e-05	-4.903645e+00	...	7	28780638	...	2.432191e-07
TCGA-BR-8486-01A-31D-2394-08	70	70	0	57	0	coding only	1	28836835	...	13	54	70	4.508123e-07	1.872605e-06	2.427451e-06	-5.614850e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-8487-01A-11D-2394-08	3628	3565	63	2807	1.736494e-02	coding only	1	28836835	...	758	2183	3628	2.628583e-05	7.570179e-05	1.258113e-04	-3.900280e+00	...	623	28780638	...	2.164650e-05
TCGA-BR-8588-01A-11D-2394-08	141	139	2	105	1.418440e-02	coding only	1	28836835	...	34	101	141	1.179048e-06	3.502465e-06	4.889580e-06	-5.310728e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8589-01A-11D-2394-08	1233	1216	17	994	1.378751e-02	coding only	1	28836835	...	222	983	1232	7.698487e-06	3.408835e-05	4.272314e-05	-4.369337e+00	...	10	28780638	...	3.474558e-07
TCGA-BR-8590-01A-11D-2394-08	148	145	3	113	2.027027e-02	coding only	1	28836835	...	32	108	148	1.109692e-06	3.745210e-06	5.132325e-06	-5.289686e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-8591-01A-11D-2394-08	1800	1762	38	1377	2.111111e-02	coding only	1	28836835	...	385	1016	1798	1.335098e-05	3.523272e-05	6.235081e-05	-4.205158e+00	...	359	28780638	...	1.247366e-05
TCGA-BR-8592-01A-11D-2394-08	49	46	3	36	6.122449e-02	coding only	1	28836835	...	10	35	49	3.467787e-07	1.213725e-06	1.699216e-06	-5.769752e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8676-01A-11D-2394-08	112	109	3	81	2.678571e-02	coding only	1	28836835	...	28	76	112	9.709803e-07	2.635518e-06	3.883921e-06	-5.410730e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-8677-01A-11D-2394-08	89	89	0	62	0	coding only	1	28836835	...	27	58	89	9.363025e-07	2.011316e-06	3.086330e-06	-5.510558e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8678-01A-11D-2394-08	134	133	1	104	7.462687e-03	coding only	1	28836835	...	29	97	134	1.005658e-06	3.363753e-06	4.646835e-06	-5.332843e+00	...	7	28780638	...	2.432191e-07
TCGA-BR-8679-01A-11D-2394-08	183	182	1	141	5.464481e-03	coding only	1	28836835	...	41	134	183	1.421793e-06	4.646835e-06	6.346050e-06	-5.197497e+00	...	7	28780638	...	2.432191e-07
TCGA-BR-8680-01A-11D-2394-08	6762	6655	107	5309	1.582372e-02	coding only	1	28836835	...	1345	5281	6756	4.664173e-05	1.831338e-04	2.342837e-04	-3.630258e+00	...	23	28780638	...	7.991484e-07
TCGA-BR-8682-01A-11D-2394-08	92	92	0	63	0	coding only	1	28836835	...	28	58	91	9.709803e-07	2.011316e-06	3.155686e-06	-5.500906e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-8683-01A-11D-2394-08	175	168	7	130	4.000000e-02	exome+100bp flanks	2	35877302	...	38	125	174	1.059165e-06	3.484097e-06	4.849863e-06	-5.314271e+00	...	4	32156043	...	1.243934e-07
TCGA-BR-8686-01A-11D-2394-08	144	142	2	101	1.388889e-02	coding only	1	28836835	...	41	97	144	1.421793e-06	3.363753e-06	4.993613e-06	-5.301585e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-8687-01A-11D-2394-08	218	213	5	162	2.293578e-02	coding only	1	28836835	...	51	161	218	1.768571e-06	5.583137e-06	7.559776e-06	-5.121491e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-8690-01A-11D-2394-08	178	173	5	129	2.808989e-02	coding only	1	28836835	...	44	125	178	1.525826e-06	4.334734e-06	6.172661e-06	-5.209528e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-A44T-01A-32D-A24D-08	25	25	0	17	0	coding only	1	28836835	...	8	14	24	2.774230e-07	4.854902e-07	8.322689e-07	-6.079736e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-A44U-01A-11D-A24D-08	125	120	5	88	4.000000e-02	exome+100bp flanks	2	35877302	...	32	86	125	8.919288e-07	2.397059e-06	3.484097e-06	-5.457910e+00	...	2	32156043	...	6.219671e-08
TCGA-BR-A452-01A-91D-A25D-08	128	127	1	92	7.812500e-03	coding only	1	28836835	...	35	83	127	1.213725e-06	2.878263e-06	4.404089e-06	-5.356144e+00	...	8	28780638	...	2.779647e-07
TCGA-BR-A453-01A-11D-A24D-08	86	85	1	64	1.162791e-02	coding only	1	28836835	...	21	62	86	7.282353e-07	2.150028e-06	2.982297e-06	-5.525449e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-A4CQ-01A-12D-A25D-08	200	198	2	158	1.000000e-02	coding only	1	28836835	...	40	153	200	1.387115e-06	5.305714e-06	6.935574e-06	-5.158918e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-A4CR-01A-11D-A24D-08	85	85	0	58	0	coding only	1	28836835	...	27	52	85	9.363025e-07	1.803249e-06	2.947619e-06	-5.530529e+00	...	6	28780638	...	2.084735e-07
TCGA-BR-A4CS-01A-11D-A24D-08	183	181	2	135	1.092896e-02	coding only	1	28836835	...	46	123	183	1.595182e-06	4.265378e-06	6.346050e-06	-5.197497e+00	...	12	28780638	...	4.169470e-07
TCGA-BR-A4IU-01A-22D-A25D-08	44	43	1	36	2.272727e-02	coding only	1	28836835	...	7	33	44	2.427451e-07	1.144370e-06	1.525826e-06	-5.816495e+00	...	3	28780638	...	1.042367e-07
TCGA-BR-A4IV-01A-31D-A25D-08	35	34	1	27	2.857143e-02	coding only	1	28836835	...	7	25	35	2.427451e-07	8.669467e-07	1.213725e-06	-5.915880e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-A4IY-01A-11D-A25D-08	163	158	5	122	3.067485e-02	exome+100bp flanks	2	35877302	...	36	117	163	1.003420e-06	3.261115e-06	4.543262e-06	-5.342632e+00	...	5	32156043	...	1.554918e-07
TCGA-BR-A4IZ-01A-32D-A25D-08	22	21	1	18	4.545455e-02	coding only	1	28836835	...	3	17	22	1.040336e-07	5.895238e-07	7.629131e-07	-6.117525e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-A4J1-01A-11D-A25D-08	83	81	2	61	2.409639e-02	coding only	1	28836835	...	20	57	83	6.935574e-07	1.976639e-06	2.878263e-06	-5.540870e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-A4J2-01A-21D-A25D-08	80	79	1	60	1.250000e-02	coding only	1	28836835	...	19	55	80	6.588795e-07	1.907283e-06	2.774230e-06	-5.556858e+00	...	5	28780638	...	1.737279e-07
TCGA-BR-A4J4-01A-12D-A25D-08	95	94	1	76	1.052632e-02	coding only	1	28836835	...	18	76	95	6.242017e-07	2.635518e-06	3.294398e-06	-5.482224e+00	...	0	28780638	...	0
TCGA-BR-A4J5-01A-21D-A25D-08	100	100	0	76	0	coding only	1	28836835	...	24	75	100	8.322689e-07	2.600840e-06	3.467787e-06	-5.459948e+00	...	1	28780638	...	3.474558e-08
TCGA-BR-A4J6-01A-11D-A25D-08	39	38	1	29	2.564103e-02	coding only	1	28836835	...	9	27	39	3.121008e-07	9.363025e-07	1.352437e-06	-5.868883e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-A4J7-01A-31D-A25D-08	71	68	3	51	4.225352e-02	coding only	1	28836835	...	17	51	71	5.895238e-07	1.768571e-06	2.462129e-06	-5.608689e+00	...	0	28780638	...	0
TCGA-BR-A4J8-01A-11D-A25D-08	111	111	0	74	0	coding only	1	28836835	...	37	72	111	1.283081e-06	2.496807e-06	3.849244e-06	-5.414625e+00	...	2	28780638	...	6.949116e-08
TCGA-BR-A4PD-01A-11D-A25D-08	171	168	3	134	1.754386e-02	coding only	1	28836835	...	34	127	170	1.179048e-06	4.404089e-06	5.895238e-06	-5.229499e+00	...	6	28780638	...	2.084735e-07
TCGA-BR-A4PE-01A-31D-A25D-08	263	255	8	197	3.041825e-02	exome+100bp flanks	2	35877302	...	58	184	262	1.616621e-06	5.128591e-06	7.302667e-06	-5.136518e+00	...	12	32156043	...	3.731802e-07
TCGA-BR-A4PF-01A-11D-A25D-08	126	126	0	104	0	coding only	1	28836835	...	22	97	125	7.629131e-07	3.363753e-06	4.334734e-06	-5.363038e+00	...	6	28780638	...	2.084735e-07
TCGA-BR-A4QI-01A-12D-A25D-08	147	145	2	108	1.360544e-02	coding only	1	28836835	...	37	104	147	1.283081e-06	3.606498e-06	5.097647e-06	-5.292630e+00	...	4	28780638	...	1.389823e-07
TCGA-BR-A4QL-01A-31D-A25D-08	2162	2134	28	1650	1.295097e-02	coding only	1	28836835	...	484	1216	2160	1.678409e-05	4.216829e-05	7.490420e-05	-4.125494e+00	...	431	28780638	...	1.497535e-05
TCGA-BR-A4QM-01A-12D-A25D-08	130	128	2	88	1.538462e-02	coding only	1	28836835	...	40	84	130	1.387115e-06	2.912941e-06	4.508123e-06	-5.346004e+00	...	4	28780638	...	1.389823e-07
TCGA-CD-5798-01A-11D-1600-08	108	106	2	80	1.851852e-02	coding only	1	28836835	...	26	77	108	9.016246e-07	2.670196e-06	3.745210e-06	-5.426524e+00	...	3	28780638	...	1.042367e-07
TCGA-CD-5799-01A-11D-1600-08	45	43	2	31	4.444444e-02	coding only	1	28836835	...	12	30	45	4.161344e-07	1.040336e-06	1.560504e-06	-5.806735e+00	...	1	28780638	...	3.474558e-08
TCGA-CD-5800-01A-11D-1600-08	197	193	4	148	2.030457e-02	coding only	1	28836835	...	45	140	196	1.560504e-06	4.854902e-06	6.796862e-06	-5.167692e+00	...	6	28780638	...	2.084735e-07
TCGA-CD-5801-01A-11D-1600-08	421	413	8	325	1.900238e-02	coding only	1	28836835	...	88	320	421	3.051653e-06	1.109692e-05	1.459938e-05	-4.835665e+00	...	5	28780638	...	1.737279e-07
TCGA-CD-5802-01A-11D-1600-08	60	60	0	47	0	coding only	1	28836835	...	13	40	60	4.508123e-07	1.387115e-06	2.080672e-06	-5.681796e+00	...	7	28780638	...	2.432191e-07
TCGA-CD-5803-01A-11D-1600-08	41	41	0	32	0	coding only	1	28836835	...	9	31	41	3.121008e-07	1.075014e-06	1.421793e-06	-5.847164e+00	...	1	28780638	...	3.474558e-08
TCGA-CD-5804-01A-12D-2053-08	90	88	2	72	2.222222e-02	coding only	1	28836835	...	16	66	90	5.548459e-07	2.288739e-06	3.121008e-06	-5.505705e+00	...	6	28780638	...	2.084735e-07
TCGA-CD-5813-01A-11D-1600-08	179	176	3	141	1.675978e-02	coding only	1	28836835	...	35	134	179	1.213725e-06	4.646835e-06	6.207339e-06	-5.207095e+00	...	7	28780638	...	2.432191e-07
TCGA-CD-8524-01A-11D-2340-08	210	210	0	163	0	coding only	1	28836835	...	47	158	210	1.629860e-06	5.479103e-06	7.282353e-06	-5.137728e+00	...	5	28780638	...	1.737279e-07
TCGA-CD-8525-01A-11D-2340-08	127	122	5	92	3.937008e-02	exome+100bp flanks	2	35877302	...	30	85	127	8.361833e-07	2.369186e-06	3.539843e-06	-5.451016e+00	...	7	32156043	...	2.176885e-07
TCGA-CD-8526-01A-11D-2340-08	78	77	1	65	1.282051e-02	coding only	1	28836835	...	12	58	78	4.161344e-07	2.011316e-06	2.704874e-06	-5.567853e+00	...	7	28780638	...	2.432191e-07
TCGA-CD-8527-01A-11D-2340-08	303	296	7	223	2.310231e-02	coding only	1	28836835	...	73	203	302	2.531484e-06	7.039608e-06	1.047272e-05	-4.979941e+00	...	19	28780638	...	6.601660e-07
TCGA-CD-8528-01A-11D-2340-08	153	151	2	117	1.307190e-02	coding only	1	28836835	...	34	115	153	1.179048e-06	3.987955e-06	5.305714e-06	-5.275256e+00	...	2	28780638	...	6.949116e-08
TCGA-CD-8529-01A-11D-2340-08	514	506	8	396	1.556420e-02	coding only	1	28836835	...	110	379	514	3.814566e-06	1.314291e-05	1.782442e-05	-4.748984e+00	...	16	28780638	...	5.559293e-07
TCGA-CD-8530-01A-11D-2340-08	130	129	1	94	7.692308e-03	coding only	1	28836835	...	35	93	130	1.213725e-06	3.225042e-06	4.508123e-06	-5.346004e+00	...	1	28780638	...	3.474558e-08
TCGA-CD-8531-01A-11D-2340-08	302	297	5	226	1.655629e-02	coding only	1	28836835	...	71	214	302	2.462129e-06	7.421064e-06	1.047272e-05	-4.979941e+00	...	12	28780638	...	4.169470e-07
TCGA-CD-8532-01A-11D-2340-08	68	66	2	49	2.941176e-02	coding only	1	28836835	...	17	45	68	5.895238e-07	1.560504e-06	2.358095e-06	-5.627439e+00	...	4	28780638	...	1.389823e-07
TCGA-CD-8533-01A-11D-2340-08	133	132	1	92	7.518797e-03	coding only	1	28836835	...	40	85	133	1.387115e-06	2.947619e-06	4.612157e-06	-5.336096e+00	...	7	28780638	...	2.432191e-07
TCGA-CD-8534-01A-11D-2340-08	90	89	1	69	1.111111e-02	coding only	1	28836835	...	20	66	90	6.935574e-07	2.288739e-06	3.121008e-06	-5.505705e+00	...	3	28780638	...	1.042367e-07
TCGA-CD-8535-01A-11D-2340-08	331	324	7	236	2.114804e-02	coding only	1	28836835	...	88	225	331	3.051653e-06	7.802521e-06	1.147837e-05	-4.940120e+00	...	11	28780638	...	3.822014e-07
TCGA-CD-8536-01A-11D-2340-08	1071	1059	12	846	1.120448e-02	coding only	1	28836835	...	213	634	1071	7.386386e-06	2.198577e-05	3.714000e-05	-4.430158e+00	...	212	28780638	...	7.366063e-06
TCGA-CD-A486-01A-11D-A24D-08	119	118	1	95	8.403361e-03	coding only	1	28836835	...	23	88	119	7.975910e-07	3.051653e-06	4.126666e-06	-5.384401e+00	...	7	28780638	...	2.432191e-07
TCGA-CD-A487-01A-21D-A24D-08	222	220	2	175	9.009009e-03	coding only	1	28836835	...	45	167	222	1.560504e-06	5.791204e-06	7.698487e-06	-5.113595e+00	...	8	28780638	...	2.779647e-07
TCGA-CD-A489-01A-11D-A24D-08	92	88	4	68	4.347826e-02	coding only	1	28836835	...	20	65	92	6.935574e-07	2.254062e-06	3.190364e-06	-5.496160e+00	...	3	28780638	...	1.042367e-07
TCGA-CD-A48A-01A-12D-A24D-08	273	269	4	214	1.465201e-02	coding only	1	28836835	...	55	209	273	1.907283e-06	7.247675e-06	9.467058e-06	-5.023785e+00	...	5	28780638	...	1.737279e-07
TCGA-CD-A48C-01A-11D-A24D-08	246	241	5	181	2.032520e-02	coding only	1	28836835	...	60	177	245	2.080672e-06	6.137983e-06	8.496078e-06	-5.070782e+00	...	3	28780638	...	1.042367e-07
TCGA-CD-A4MG-01A-11D-A25D-08	3286	3231	55	2525	1.673767e-02	coding only	1	28836835	...	705	1990	3283	2.444790e-05	6.900896e-05	1.138474e-04	-3.943677e+00	...	533	28780638	...	1.851939e-05
TCGA-CD-A4MH-01A-11D-A25D-08	106	105	1	72	9.433962e-03	coding only	1	28836835	...	33	66	106	1.144370e-06	2.288739e-06	3.675854e-06	-5.434642e+00	...	6	28780638	...	2.084735e-07
TCGA-CD-A4MI-01A-21D-A25D-08	1276	1256	20	977	1.567398e-02	coding only	1	28836835	...	279	756	1276	9.675126e-06	2.621647e-05	4.424896e-05	-4.354097e+00	...	221	28780638	...	7.678773e-06
TCGA-CD-A4MJ-01A-11D-A25D-08	808	800	8	641	9.900990e-03	coding only	1	28836835	...	159	459	807	5.513781e-06	1.591714e-05	2.798504e-05	-4.553074e+00	...	181	28780638	...	6.288950e-06
TCGA-CG-4300-01A-01D-1158-08	131	128	3	99	2.290076e-02	coding only	1	28836835	...	29	94	131	1.005658e-06	3.259720e-06	4.542801e-06	-5.342676e+00	...	5	28780638	...	1.737279e-07
TCGA-CG-4301-01A-01D-1158-08	63	62	1	46	1.587302e-02	coding only	1	28836835	...	16	45	63	5.548459e-07	1.560504e-06	2.184706e-06	-5.660607e+00	...	1	28780638	...	3.474558e-08
TCGA-CG-4304-01A-01D-1158-08	94	93	1	67	1.063830e-02	coding only	1	28836835	...	26	59	94	9.016246e-07	2.045994e-06	3.259720e-06	-5.486820e+00	...	8	28780638	...	2.779647e-07
TCGA-CG-4305-01A-01D-1158-08	1472	1444	28	1105	1.902174e-02	coding only	1	28836835	...	339	835	1472	1.175580e-05	2.895602e-05	5.104582e-05	-4.292040e+00	...	270	28780638	...	9.381307e-06
TCGA-CG-4306-01A-01D-1158-08	1337	1314	23	1030	1.720269e-02	coding only	1	28836835	...	284	752	1336	9.848515e-06	2.607776e-05	4.632963e-05	-4.334141e+00	...	277	28780638	...	9.624526e-06
TCGA-CG-4436-01A-01D-1158-08	207	206	1	159	4.830918e-03	coding only	1	28836835	...	47	155	207	1.629860e-06	5.375070e-06	7.178319e-06	-5.143977e+00	...	4	28780638	...	1.389823e-07
TCGA-CG-4437-01A-01D-1800-08	571	560	11	449	1.926445e-02	coding only	1	28836835	...	111	427	571	3.849244e-06	1.480745e-05	1.980106e-05	-4.703311e+00	...	22	28780638	...	7.644028e-07
TCGA-CG-4438-01A-01D-1158-08	151	149	2	119	1.324503e-02	coding only	1	28836835	...	30	115	151	1.040336e-06	3.987955e-06	5.236358e-06	-5.280971e+00	...	4	28780638	...	1.389823e-07
TCGA-CG-4440-01A-01D-1158-08	143	142	1	119	6.993007e-03	coding only	1	28836835	...	23	113	143	7.975910e-07	3.918599e-06	4.958935e-06	-5.304612e+00	...	6	28780638	...	2.084735e-07
TCGA-CG-4441-01A-01D-1800-08	123	122	1	91	8.130081e-03	coding only	1	28836835	...	31	86	123	1.075014e-06	2.982297e-06	4.265378e-06	-5.370042e+00	...	5	28780638	...	1.737279e-07
TCGA-CG-4442-01A-01D-1158-08	1640	1613	27	1254	1.646341e-02	coding only	1	28836835	...	357	924	1638	1.238000e-05	3.204235e-05	5.680235e-05	-4.245634e+00	...	330	28780638	...	1.146604e-05
TCGA-CG-4443-01A-01D-1158-08	108	107	1	78	9.259259e-03	coding only	1	28836835	...	29	72	108	1.005658e-06	2.496807e-06	3.745210e-06	-5.426524e+00	...	6	28780638	...	2.084735e-07
TCGA-CG-4444-01A-01D-1158-08	190	189	1	138	5.263158e-03	coding only	1	28836835	...	51	136	190	1.768571e-06	4.716190e-06	6.588795e-06	-5.181194e+00	...	2	28780638	...	6.949116e-08
TCGA-CG-4449-01A-01D-1158-08	114	111	3	91	2.631579e-02	coding only	1	28836835	...	20	81	114	6.935574e-07	2.808907e-06	3.953277e-06	-5.403043e+00	...	10	28780638	...	3.474558e-07
TCGA-CG-4455-01A-01D-1158-08	47	46	1	31	2.127660e-02	coding only	1	28836835	...	15	28	47	5.201680e-07	9.709803e-07	1.629860e-06	-5.787850e+00	...	3	28780638	...	1.042367e-07
TCGA-CG-4460-01A-01D-1158-08	2171	2146	25	1631	1.151543e-02	coding only	1	28836835	...	513	1371	2168	1.778975e-05	4.754336e-05	7.518162e-05	-4.123888e+00	...	259	28780638	...	8.999106e-06
TCGA-CG-4462-01A-01D-1158-08	82	82	0	57	0	coding only	1	28836835	...	25	54	82	8.669467e-07	1.872605e-06	2.843585e-06	-5.546134e+00	...	3	28780638	...	1.042367e-07
TCGA-CG-4465-01A-01D-1158-08	724	709	15	555	2.071823e-02	coding only	1	28836835	...	154	422	724	5.340392e-06	1.463406e-05	2.510678e-05	-4.600209e+00	...	133	28780638	...	4.621162e-06
TCGA-CG-4466-01A-01D-1158-08	231	221	10	167	4.329004e-02	exome+100bp flanks	2	35877302	...	54	158	231	1.505130e-06	4.403899e-06	6.438611e-06	-5.191208e+00	...	9	32156043	...	2.798852e-07
TCGA-CG-4469-01A-01D-1158-08	339	335	4	266	1.179941e-02	coding only	1	28836835	...	69	257	339	2.392773e-06	8.912212e-06	1.175580e-05	-4.929748e+00	...	9	28780638	...	3.127102e-07
TCGA-CG-4474-01A-02D-1158-08	104	101	3	75	2.884615e-02	coding only	1	28836835	...	26	67	104	9.016246e-07	2.323417e-06	3.606498e-06	-5.442914e+00	...	8	28780638	...	2.779647e-07
TCGA-CG-4475-01A-01D-1158-08	63	63	0	50	0	coding only	1	28836835	...	13	45	63	4.508123e-07	1.560504e-06	2.184706e-06	-5.660607e+00	...	5	28780638	...	1.737279e-07
TCGA-CG-4476-01A-01D-1158-08	136	134	2	113	1.470588e-02	coding only	1	28836835	...	21	109	136	7.282353e-07	3.779888e-06	4.716190e-06	-5.326409e+00	...	4	28780638	...	1.389823e-07
TCGA-CG-4477-01A-01D-1158-08	132	130	2	115	1.515152e-02	coding only	1	28836835	...	15	40	132	5.201680e-07	1.387115e-06	4.577479e-06	-5.339374e+00	...	75	28780638	...	2.605919e-06
TCGA-CG-5716-01A-21D-1800-08	15	15	0	13	0	coding only	1	28836835	...	2	13	15	6.935574e-08	4.508123e-07	5.201680e-07	-6.283856e+00	...	0	28780638	...	0
TCGA-CG-5717-01A-11D-1600-08	108	106	2	80	1.851852e-02	coding only	1	28836835	...	26	75	108	9.016246e-07	2.600840e-06	3.745210e-06	-5.426524e+00	...	5	28780638	...	1.737279e-07
TCGA-CG-5718-01A-11D-1600-08	103	100	3	81	2.912621e-02	coding only	1	28836835	...	19	78	103	6.588795e-07	2.704874e-06	3.571821e-06	-5.447110e+00	...	3	28780638	...	1.042367e-07
TCGA-CG-5719-01A-11D-1600-08	76	75	1	56	1.315789e-02	coding only	1	28836835	...	19	54	76	6.588795e-07	1.872605e-06	2.635518e-06	-5.579134e+00	...	2	28780638	...	6.949116e-08
TCGA-CG-5720-01A-11D-1600-08	84	84	0	61	0	coding only	1	28836835	...	23	59	84	7.975910e-07	2.045994e-06	2.912941e-06	-5.535668e+00	...	2	28780638	...	6.949116e-08
TCGA-CG-5721-01A-11D-1600-08	4841	4773	68	3678	1.404668e-02	coding only	1	28836835	...	1095	3156	4840	3.797227e-05	1.094434e-04	1.678409e-04	-3.775102e+00	...	521	28780638	...	1.810245e-05
TCGA-CG-5722-01A-21D-1600-08	99	98	1	73	1.010101e-02	coding only	1	28836835	...	25	67	98	8.669467e-07	2.323417e-06	3.398431e-06	-5.468722e+00	...	5	28780638	...	1.737279e-07
TCGA-CG-5723-01A-11D-1600-08	2027	1983	44	1558	2.170696e-02	coding only	1	28836835	...	425	1165	2027	1.473809e-05	4.039972e-05	7.029204e-05	-4.153094e+00	...	393	28780638	...	1.365501e-05
TCGA-CG-5724-01A-11D-1600-08	118	116	2	90	1.694915e-02	coding only	1	28836835	...	26	85	118	9.016246e-07	2.947619e-06	4.091989e-06	-5.388066e+00	...	5	28780638	...	1.737279e-07
TCGA-CG-5725-01A-11D-1600-08	104	103	1	96	9.615385e-03	coding only	1	28836835	...	7	33	104	2.427451e-07	1.144370e-06	3.606498e-06	-5.442914e+00	...	63	28780638	...	2.188972e-06
TCGA-CG-5726-01A-11D-1600-08	1469	1435	34	1114	2.314500e-02	coding only	1	28836835	...	321	811	1469	1.113160e-05	2.812375e-05	5.094179e-05	-4.292926e+00	...	302	28780638	...	1.049317e-05
TCGA-CG-5727-01A-11D-1600-08	176	175	1	125	5.681818e-03	coding only	1	28836835	...	50	123	176	1.733893e-06	4.265378e-06	6.103305e-06	-5.214435e+00	...	2	28780638	...	6.949116e-08
TCGA-CG-5728-01A-11D-1600-08	1719	1694	25	1310	1.454334e-02	coding only	1	28836835	...	384	941	1718	1.331630e-05	3.263188e-05	5.957658e-05	-4.224924e+00	...	368	28780638	...	1.278637e-05
TCGA-CG-5730-01A-11D-1600-08	179	177	2	123	1.117318e-02	coding only	1	28836835	...	54	116	179	1.872605e-06	4.022633e-06	6.207339e-06	-5.207095e+00	...	7	28780638	...	2.432191e-07
TCGA-CG-5732-01A-11D-1600-08	66	65	1	46	1.515152e-02	coding only	1	28836835	...	19	43	66	6.588795e-07	1.491148e-06	2.288739e-06	-5.640404e+00	...	3	28780638	...	1.042367e-07
TCGA-CG-5733-01A-11D-1600-08	1254	1231	23	941	1.834131e-02	coding only	1	28836835	...	290	707	1253	1.005658e-05	2.451725e-05	4.345137e-05	-4.361997e+00	...	234	28780638	...	8.130466e-06
TCGA-CG-5734-01A-11D-1600-08	95	92	3	73	3.157895e-02	coding only	1	28836835	...	19	71	95	6.588795e-07	2.462129e-06	3.294398e-06	-5.482224e+00	...	2	28780638	...	6.949116e-08
TCGA-D7-5577-01A-01D-1600-08	135	132	3	107	2.222222e-02	coding only	1	28836835	...	25	102	135	8.669467e-07	3.537143e-06	4.681512e-06	-5.329614e+00	...	5	28780638	...	1.737279e-07
TCGA-D7-5578-01A-01D-1600-08	249	247	2	177	8.032129e-03	coding only	1	28836835	...	70	174	249	2.427451e-06	6.033949e-06	8.634789e-06	-5.063748e+00	...	3	28780638	...	1.042367e-07
TCGA-D7-5579-01A-01D-1600-08	171	169	2	137	1.169591e-02	coding only	1	28836835	...	32	133	171	1.109692e-06	4.612157e-06	5.929916e-06	-5.226951e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-6518-01A-11D-1800-08	94	94	0	67	0	coding only	1	28836835	...	27	62	94	9.363025e-07	2.150028e-06	3.259720e-06	-5.486820e+00	...	5	28780638	...	1.737279e-07
TCGA-D7-6519-01A-11D-1800-08	64	63	1	50	1.562500e-02	coding only	1	28836835	...	13	46	64	4.508123e-07	1.595182e-06	2.219384e-06	-5.653768e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-6520-01A-11D-1800-08	73	73	0	54	0	coding only	1	28836835	...	19	52	73	6.588795e-07	1.803249e-06	2.531484e-06	-5.596625e+00	...	2	28780638	...	6.949116e-08
TCGA-D7-6521-01A-11D-1800-08	87	86	1	74	1.149425e-02	coding only	1	28836835	...	12	72	87	4.161344e-07	2.496807e-06	3.016975e-06	-5.520428e+00	...	2	28780638	...	6.949116e-08
TCGA-D7-6522-01A-11D-1800-08	46	46	0	35	0	coding only	1	28836835	...	11	35	46	3.814566e-07	1.213725e-06	1.595182e-06	-5.797190e+00	...	0	28780638	...	0
TCGA-D7-6524-01A-11D-1800-08	125	119	6	89	4.800000e-02	exome+100bp flanks	2	35877302	...	30	87	125	8.361833e-07	2.424932e-06	3.484097e-06	-5.457910e+00	...	2	32156043	...	6.219671e-08
TCGA-D7-6525-01A-11D-1800-08	190	187	3	134	1.578947e-02	coding only	1	28836835	...	53	129	190	1.837927e-06	4.473445e-06	6.588795e-06	-5.181194e+00	...	5	28780638	...	1.737279e-07
TCGA-D7-6526-01A-11D-1800-08	244	240	4	183	1.639344e-02	coding only	1	28836835	...	57	172	244	1.976639e-06	5.964594e-06	8.461400e-06	-5.072558e+00	...	10	28780638	...	3.474558e-07
TCGA-D7-6527-01A-11D-1800-08	240	233	7	185	2.916667e-02	coding only	1	28836835	...	48	178	240	1.664538e-06	6.172661e-06	8.322689e-06	-5.079736e+00	...	7	28780638	...	2.432191e-07
TCGA-D7-6528-01A-11D-1800-08	362	357	5	282	1.381215e-02	coding only	1	28836835	...	75	269	362	2.600840e-06	9.328347e-06	1.255339e-05	-4.901239e+00	...	13	28780638	...	4.516926e-07
TCGA-D7-6815-01A-11D-1882-08	162	156	6	118	3.703704e-02	exome+100bp flanks	2	35877302	...	38	105	162	1.059165e-06	2.926641e-06	4.515390e-06	-5.345305e+00	...	13	32156043	...	4.042786e-07
TCGA-D7-6817-01A-11D-1882-08	93	91	2	70	2.150538e-02	coding only	1	28836835	...	21	69	93	7.282353e-07	2.392773e-06	3.225042e-06	-5.491465e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-6818-01A-11D-1882-08	174	173	1	143	5.747126e-03	coding only	1	28836835	...	30	138	173	1.040336e-06	4.785546e-06	5.999271e-06	-5.221901e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-6820-01A-11D-1882-08	104	102	2	73	1.923077e-02	coding only	1	28836835	...	29	71	104	1.005658e-06	2.462129e-06	3.606498e-06	-5.442914e+00	...	2	28780638	...	6.949116e-08
TCGA-D7-6822-01A-11D-1882-08	264	261	3	217	1.136364e-02	coding only	1	28836835	...	44	209	264	1.525826e-06	7.247675e-06	9.154958e-06	-5.038344e+00	...	8	28780638	...	2.779647e-07
TCGA-D7-8570-01A-11D-2340-08	143	142	1	104	6.993007e-03	coding only	1	28836835	...	38	100	143	1.317759e-06	3.467787e-06	4.958935e-06	-5.304612e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-8572-01A-11D-2340-08	231	228	3	176	1.298701e-02	coding only	1	28836835	...	52	171	231	1.803249e-06	5.929916e-06	8.010588e-06	-5.096336e+00	...	5	28780638	...	1.737279e-07
TCGA-D7-8573-01A-11D-2340-08	119	118	1	89	8.403361e-03	coding only	1	28836835	...	29	85	119	1.005658e-06	2.947619e-06	4.126666e-06	-5.384401e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-8574-01A-13D-2340-08	65	63	2	50	3.076923e-02	coding only	1	28836835	...	13	49	65	4.508123e-07	1.699216e-06	2.254062e-06	-5.647034e+00	...	1	28780638	...	3.474558e-08
TCGA-D7-8575-01A-11D-2340-08	66	66	0	52	0	coding only	1	28836835	...	14	44	66	4.854902e-07	1.525826e-06	2.288739e-06	-5.640404e+00	...	8	28780638	...	2.779647e-07
TCGA-D7-8576-01A-11D-2340-08	87	85	2	67	2.298851e-02	coding only	1	28836835	...	18	63	87	6.242017e-07	2.184706e-06	3.016975e-06	-5.520428e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-8578-01A-21D-2340-08	66	66	0	52	0	coding only	1	28836835	...	14	48	66	4.854902e-07	1.664538e-06	2.288739e-06	-5.640404e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-8579-01A-11D-2340-08	140	136	4	102	2.857143e-02	coding only	1	28836835	...	34	102	140	1.179048e-06	3.537143e-06	4.854902e-06	-5.313820e+00	...	0	28780638	...	0
TCGA-D7-A4YT-01A-11D-A25D-08	331	328	3	243	9.063444e-03	coding only	1	28836835	...	84	224	329	2.912941e-06	7.767843e-06	1.140902e-05	-4.942752e+00	...	18	28780638	...	6.254205e-07
TCGA-D7-A4YU-01A-21D-A25D-08	221	218	3	180	1.357466e-02	coding only	1	28836835	...	38	173	221	1.317759e-06	5.999271e-06	7.663809e-06	-5.115555e+00	...	7	28780638	...	2.432191e-07
TCGA-D7-A4YV-01A-11D-A25D-08	1101	1086	15	841	1.362398e-02	coding only	1	28836835	...	245	641	1098	8.496078e-06	2.222851e-05	3.807630e-05	-4.419345e+00	...	197	28780638	...	6.844880e-06
TCGA-D7-A4YX-01A-11D-A25D-08	93	91	2	69	2.150538e-02	coding only	1	28836835	...	22	66	93	7.629131e-07	2.288739e-06	3.225042e-06	-5.491465e+00	...	3	28780638	...	1.042367e-07
TCGA-D7-A4YY-01A-11D-A25D-08	566	560	6	409	1.060071e-02	coding only	1	28836835	...	151	309	566	5.236358e-06	1.071546e-05	1.962767e-05	-4.707131e+00	...	100	28780638	...	3.474558e-06
TCGA-D7-A4Z0-01A-22D-A25D-08	336	330	6	271	1.785714e-02	coding only	1	28836835	...	59	265	336	2.045994e-06	9.189635e-06	1.165176e-05	-4.933608e+00	...	6	28780638	...	2.084735e-07
TCGA-D7-A6ET-01A-32D-A32N-08	42	41	1	29	2.380952e-02	coding only	1	28836835	...	12	24	42	4.161344e-07	8.322689e-07	1.456471e-06	-5.836698e+00	...	5	28780638	...	1.737279e-07
TCGA-D7-A6EV-01A-11D-A31L-08	211	204	7	157	3.317536e-02	exome+100bp flanks	2	35877302	...	47	147	211	1.310020e-06	4.097298e-06	5.881156e-06	-5.230537e+00	...	10	32156043	...	3.109835e-07
TCGA-D7-A6EX-01A-11D-A31L-08	145	143	2	112	1.379310e-02	coding only	1	28836835	...	31	107	145	1.075014e-06	3.710532e-06	5.028291e-06	-5.298580e+00	...	5	28780638	...	1.737279e-07
TCGA-D7-A6EY-01A-21D-A31L-08	1755	1717	38	1355	2.165242e-02	coding only	1	28836835	...	362	1059	1755	1.255339e-05	3.672386e-05	6.085966e-05	-4.215670e+00	...	296	28780638	...	1.028469e-05
TCGA-D7-A6EZ-01A-11D-A31L-08	303	299	4	248	1.320132e-02	coding only	1	28836835	...	51	228	302	1.768571e-06	7.906554e-06	1.047272e-05	-4.979941e+00	...	19	28780638	...	6.601660e-07
TCGA-D7-A6F0-01A-11D-A31L-08	158	154	4	112	2.531646e-02	coding only	1	28836835	...	42	102	157	1.456471e-06	3.537143e-06	5.444426e-06	-5.264048e+00	...	9	28780638	...	3.127102e-07
TCGA-D7-A6F2-01A-12D-A31L-08	86	86	0	71	0	coding only	1	28836835	...	15	69	86	5.201680e-07	2.392773e-06	2.982297e-06	-5.525449e+00	...	2	28780638	...	6.949116e-08
TCGA-D7-A747-01A-22D-A33T-08	118	115	3	97	2.542373e-02	coding only	1	28836835	...	18	94	118	6.242017e-07	3.259720e-06	4.091989e-06	-5.388066e+00	...	3	28780638	...	1.042367e-07
TCGA-D7-A748-01A-12D-A32N-08	54	53	1	40	1.851852e-02	coding only	1	28836835	...	13	36	54	4.508123e-07	1.248403e-06	1.872605e-06	-5.727554e+00	...	4	28780638	...	1.389823e-07
TCGA-D7-A74A-01A-11D-A32N-08	170	165	5	126	2.941176e-02	coding only	1	28836835	...	39	117	170	1.352437e-06	4.057311e-06	5.895238e-06	-5.229499e+00	...	9	28780638	...	3.127102e-07
TCGA-D7-A74B-01A-12D-A33T-08	40	40	0	28	0	coding only	1	28836835	...	12	26	40	4.161344e-07	9.016246e-07	1.387115e-06	-5.857888e+00	...	2	28780638	...	6.949116e-08
TCGA-EQ-5647-01A-01D-1600-08	96	93	3	69	3.125000e-02	coding only	1	28836835	...	24	69	96	8.322689e-07	2.392773e-06	3.329075e-06	-5.477676e+00	...	0	28780638	...	0
TCGA-EQ-8122-01A-11D-2340-08	218	210	8	158	3.669725e-02	exome+100bp flanks	2	35877302	...	52	151	218	1.449384e-06	4.208789e-06	6.076265e-06	-5.216363e+00	...	7	32156043	...	2.176885e-07
TCGA-EQ-A4SO-01A-11D-A25D-08	209	208	1	170	4.784689e-03	coding only	1	28836835	...	38	146	209	1.317759e-06	5.062969e-06	7.247675e-06	-5.139801e+00	...	24	28780638	...	8.338940e-07
TCGA-F1-6177-01A-11D-1800-08	1592	1566	26	1202	1.633166e-02	coding only	1	28836835	...	363	903	1591	1.258807e-05	3.131412e-05	5.517249e-05	-4.258277e+00	...	299	28780638	...	1.038893e-05
TCGA-F1-6874-01A-11D-1882-08	1088	1070	18	832	1.654412e-02	coding only	1	28836835	...	238	614	1087	8.253333e-06	2.129221e-05	3.769484e-05	-4.423718e+00	...	217	28780638	...	7.539791e-06
TCGA-F1-6875-01A-11D-2053-08	99	97	2	78	2.020202e-02	coding only	1	28836835	...	19	77	99	6.588795e-07	2.670196e-06	3.433109e-06	-5.464312e+00	...	1	28780638	...	3.474558e-08
TCGA-F1-A448-01A-11D-A24D-08	780	765	15	580	1.923077e-02	coding only	1	28836835	...	185	460	780	6.415406e-06	1.595182e-05	2.704874e-05	-4.567853e+00	...	120	28780638	...	4.169470e-06
TCGA-F1-A72C-01A-21D-A33T-08	67	67	0	51	0	coding only	1	28836835	...	16	45	67	5.548459e-07	1.560504e-06	2.323417e-06	-5.633873e+00	...	6	28780638	...	2.084735e-07
TCGA-FP-7735-01A-11D-2053-08	78	78	0	58	0	coding only	1	28836835	...	20	55	78	6.935574e-07	1.907283e-06	2.704874e-06	-5.567853e+00	...	3	28780638	...	1.042367e-07
TCGA-FP-7829-01A-11D-2053-08	287	283	4	213	1.393728e-02	coding only	1	28836835	...	70	202	287	2.427451e-06	7.004930e-06	9.952549e-06	-5.002066e+00	...	10	28780638	...	3.474558e-07
TCGA-FP-7916-01A-11D-2201-08	126	126	0	94	0	coding only	1	28836835	...	32	90	126	1.109692e-06	3.121008e-06	4.369412e-06	-5.359577e+00	...	4	28780638	...	1.389823e-07
TCGA-FP-7998-01A-11D-2201-08	78	75	3	56	3.846154e-02	coding only	1	28836835	...	19	54	77	6.588795e-07	1.872605e-06	2.670196e-06	-5.573457e+00	...	1	28780638	...	3.474558e-08
TCGA-FP-8099-01A-11D-2340-08	178	178	0	128	0	coding only	1	28836835	...	50	124	178	1.733893e-06	4.300056e-06	6.172661e-06	-5.209528e+00	...	4	28780638	...	1.389823e-07
TCGA-FP-8209-01A-11D-2340-08	20	20	0	17	0	coding only	1	28836835	...	3	17	20	1.040336e-07	5.895238e-07	6.935574e-07	-6.158918e+00	...	0	28780638	...	0
TCGA-FP-8210-01A-11D-2340-08	10	10	0	8	0	coding only	1	28836835	...	2	8	10	6.935574e-08	2.774230e-07	3.467787e-07	-6.459948e+00	...	0	28780638	...	0
TCGA-FP-8211-01A-11D-2340-08	148	144	4	122	2.702703e-02	coding only	1	28836835	...	22	111	148	7.629131e-07	3.849244e-06	5.132325e-06	-5.289686e+00	...	11	28780638	...	3.822014e-07
TCGA-FP-8631-01A-11D-2394-08	123	121	2	92	1.626016e-02	coding only	1	28836835	...	29	83	123	1.005658e-06	2.878263e-06	4.265378e-06	-5.370042e+00	...	9	28780638	...	3.127102e-07
TCGA-FP-A4BE-01A-12D-A24D-08	1825	1791	34	1386	1.863014e-02	coding only	1	28836835	...	405	1092	1822	1.404454e-05	3.786823e-05	6.318308e-05	-4.199399e+00	...	291	28780638	...	1.011096e-05
TCGA-FP-A4BF-01A-12D-A24D-08	130	129	1	100	7.692308e-03	coding only	1	28836835	...	29	93	130	1.005658e-06	3.225042e-06	4.508123e-06	-5.346004e+00	...	7	28780638	...	2.432191e-07
TCGA-FP-A8CX-01A-11D-A364-08	89	88	1	69	1.123596e-02	coding only	1	28836835	...	19	63	89	6.588795e-07	2.184706e-06	3.086330e-06	-5.510558e+00	...	6	28780638	...	2.084735e-07
TCGA-FP-A9TM-01A-11D-A397-08	172	169	3	131	1.744186e-02	coding only	1	28836835	...	38	123	172	1.317759e-06	4.265378e-06	5.964594e-06	-5.224419e+00	...	8	28780638	...	2.779647e-07
TCGA-HF-7131-01A-11D-2053-08	104	102	2	76	1.923077e-02	coding only	1	28836835	...	26	75	104	9.016246e-07	2.600840e-06	3.606498e-06	-5.442914e+00	...	1	28780638	...	3.474558e-08
TCGA-HF-7132-01A-11D-2053-08	1571	1545	26	1196	1.654997e-02	coding only	1	28836835	...	349	909	1571	1.210258e-05	3.152218e-05	5.447893e-05	-4.263771e+00	...	287	28780638	...	9.971982e-06
TCGA-HF-7133-01A-11D-2053-08	101	101	0	79	0	coding only	1	28836835	...	22	73	101	7.629131e-07	2.531484e-06	3.502465e-06	-5.455626e+00	...	6	28780638	...	2.084735e-07
TCGA-HF-7134-01A-11D-2053-08	309	305	4	237	1.294498e-02	coding only	1	28836835	...	68	233	308	2.358095e-06	8.079944e-06	1.068078e-05	-4.971397e+00	...	3	28780638	...	1.042367e-07
TCGA-HF-7136-01A-11D-2053-08	113	112	1	89	8.849558e-03	coding only	1	28836835	...	23	80	113	7.975910e-07	2.774230e-06	3.918599e-06	-5.406869e+00	...	9	28780638	...	3.127102e-07
TCGA-HF-A5NB-01A-11D-A31L-08	1695	1662	33	1302	1.946903e-02	coding only	1	28836835	...	360	953	1695	1.248403e-05	3.304801e-05	5.877899e-05	-4.230778e+00	...	348	28780638	...	1.209146e-05
TCGA-HJ-7597-01A-21D-2201-08	986	972	14	722	1.419878e-02	coding only	1	28836835	...	250	564	985	8.669467e-06	1.955832e-05	3.415770e-05	-4.466511e+00	...	157	28780638	...	5.455056e-06
TCGA-HU-8238-01A-11D-2340-08	181	179	2	141	1.104972e-02	coding only	1	28836835	...	38	135	181	1.317759e-06	4.681512e-06	6.276694e-06	-5.202269e+00	...	6	28780638	...	2.084735e-07
TCGA-HU-8243-01A-11D-2340-08	177	175	2	129	1.129944e-02	coding only	1	28836835	...	46	119	177	1.595182e-06	4.126666e-06	6.137983e-06	-5.211974e+00	...	10	28780638	...	3.474558e-07
TCGA-HU-8244-01A-11D-2340-08	138	137	1	95	7.246377e-03	coding only	1	28836835	...	42	93	138	1.456471e-06	3.225042e-06	4.785546e-06	-5.320069e+00	...	2	28780638	...	6.949116e-08
TCGA-HU-8249-01A-11D-2340-08	171	169	2	129	1.169591e-02	coding only	1	28836835	...	40	124	171	1.387115e-06	4.300056e-06	5.929916e-06	-5.226951e+00	...	5	28780638	...	1.737279e-07
TCGA-HU-8602-01A-11D-2394-08	2020	1996	24	1540	1.188119e-02	coding only	1	28836835	...	455	1136	2018	1.577843e-05	3.939406e-05	6.997994e-05	-4.155026e+00	...	403	28780638	...	1.400247e-05
TCGA-HU-8604-01A-11D-2394-08	257	254	3	188	1.167315e-02	coding only	1	28836835	...	66	180	257	2.288739e-06	6.242017e-06	8.912212e-06	-5.050014e+00	...	8	28780638	...	2.779647e-07
TCGA-HU-8608-01A-11D-2394-08	107	107	0	86	0	coding only	1	28836835	...	21	79	107	7.282353e-07	2.739552e-06	3.710532e-06	-5.430564e+00	...	7	28780638	...	2.432191e-07
TCGA-HU-8610-01A-22D-2394-08	95	94	1	71	1.052632e-02	coding only	1	28836835	...	23	70	95	7.975910e-07	2.427451e-06	3.294398e-06	-5.482224e+00	...	1	28780638	...	3.474558e-08
TCGA-HU-A4G2-01A-11D-A25D-08	75	75	0	51	0	coding only	1	28836835	...	24	47	75	8.322689e-07	1.629860e-06	2.600840e-06	-5.584886e+00	...	4	28780638	...	1.389823e-07
TCGA-HU-A4G3-01A-11D-A24D-08	133	132	1	96	7.518797e-03	coding only	1	28836835	...	36	88	133	1.248403e-06	3.051653e-06	4.612157e-06	-5.336096e+00	...	8	28780638	...	2.779647e-07
TCGA-HU-A4G6-01A-11D-A24D-08	105	100	5	77	4.761905e-02	exome+100bp flanks	2	35877302	...	23	71	105	6.410738e-07	1.978967e-06	2.926641e-06	-5.533630e+00	...	6	32156043	...	1.865901e-07
TCGA-HU-A4G8-01A-11D-A25D-08	1866	1848	18	1425	9.646302e-03	coding only	1	28836835	...	423	1063	1865	1.466874e-05	3.686258e-05	6.467423e-05	-4.189269e+00	...	360	28780638	...	1.250841e-05
TCGA-HU-A4G9-01A-11D-A24D-08	959	941	18	719	1.876955e-02	coding only	1	28836835	...	222	529	959	7.698487e-06	1.834459e-05	3.325608e-05	-4.478129e+00	...	190	28780638	...	6.601660e-06
TCGA-HU-A4GC-01A-12D-A25D-08	175	172	3	125	1.714286e-02	coding only	1	28836835	...	47	120	175	1.629860e-06	4.161344e-06	6.068627e-06	-5.216910e+00	...	5	28780638	...	1.737279e-07
TCGA-HU-A4GD-01A-11D-A25D-08	114	112	2	82	1.754386e-02	coding only	1	28836835	...	29	78	113	1.005658e-06	2.704874e-06	3.918599e-06	-5.406869e+00	...	4	28780638	...	1.389823e-07
TCGA-HU-A4GF-01A-11D-A24D-08	180	178	2	136	1.111111e-02	coding only	1	28836835	...	42	124	180	1.456471e-06	4.300056e-06	6.242017e-06	-5.204675e+00	...	12	28780638	...	4.169470e-07
TCGA-HU-A4GH-01A-11D-A24D-08	849	834	15	695	1.766784e-02	coding only	1	28836835	...	139	684	849	4.820224e-06	2.371966e-05	2.944151e-05	-4.531040e+00	...	10	28780638	...	3.474558e-07
TCGA-HU-A4GJ-01A-11D-A25D-08	4	4	0	3	0	coding only	1	28836835	...	1	2	4	3.467787e-08	6.935574e-08	1.387115e-07	-6.857888e+00	...	1	28780638	...	3.474558e-08
TCGA-HU-A4GN-01A-11D-A25D-08	1505	1477	28	1141	1.860465e-02	coding only	1	28836835	...	336	876	1505	1.165176e-05	3.037781e-05	5.219019e-05	-4.282411e+00	...	265	28780638	...	9.207579e-06
TCGA-HU-A4GP-01A-11D-A25D-08	265	262	3	195	1.132075e-02	coding only	1	28836835	...	67	184	265	2.323417e-06	6.380728e-06	9.189635e-06	-5.036702e+00	...	11	28780638	...	3.822014e-07
TCGA-HU-A4GQ-01A-11D-A25D-08	2205	2154	51	1656	2.312925e-02	coding only	1	28836835	...	498	1282	2201	1.726958e-05	4.445703e-05	7.632599e-05	-4.117328e+00	...	370	28780638	...	1.285587e-05
TCGA-HU-A4GT-01A-21D-A25D-08	1918	1887	31	1449	1.616267e-02	coding only	1	28836835	...	437	1097	1916	1.515423e-05	3.804162e-05	6.644280e-05	-4.177552e+00	...	351	28780638	...	1.219570e-05
TCGA-HU-A4GU-01A-11D-A25D-08	1822	1785	37	1331	2.030735e-02	coding only	1	28836835	...	454	1099	1821	1.574375e-05	3.811098e-05	6.314840e-05	-4.199638e+00	...	230	28780638	...	7.991484e-06
TCGA-HU-A4GX-01A-12D-A25D-08	1557	1533	24	1188	1.541426e-02	coding only	1	28836835	...	345	881	1557	1.196386e-05	3.055120e-05	5.399344e-05	-4.267659e+00	...	306	28780638	...	1.063215e-05
TCGA-HU-A4GY-01A-21D-A24D-08	93	91	2	72	2.150538e-02	coding only	1	28836835	...	19	71	93	6.588795e-07	2.462129e-06	3.225042e-06	-5.491465e+00	...	1	28780638	...	3.474558e-08
TCGA-HU-A4H0-01A-11D-A25D-08	202	198	4	155	1.980198e-02	coding only	1	28836835	...	43	150	202	1.491148e-06	5.201680e-06	7.004930e-06	-5.154596e+00	...	5	28780638	...	1.737279e-07
TCGA-HU-A4H2-01A-11D-A25D-08	200	192	8	152	4.000000e-02	exome+100bp flanks	2	35877302	...	40	149	200	1.114911e-06	4.153044e-06	5.574555e-06	-5.253790e+00	...	3	32156043	...	9.329506e-08
TCGA-HU-A4H3-01A-21D-A25D-08	1085	1058	27	825	2.488479e-02	coding only	1	28836835	...	233	600	1085	8.079944e-06	2.080672e-05	3.762549e-05	-4.424518e+00	...	225	28780638	...	7.817756e-06
TCGA-HU-A4H4-01A-21D-A25D-08	809	794	15	611	1.854141e-02	coding only	1	28836835	...	183	526	809	6.346050e-06	1.824056e-05	2.805440e-05	-4.551999e+00	...	85	28780638	...	2.953374e-06
TCGA-HU-A4H5-01A-21D-A25D-08	309	306	3	244	9.708738e-03	coding only	1	28836835	...	62	229	309	2.150028e-06	7.941232e-06	1.071546e-05	-4.969989e+00	...	15	28780638	...	5.211837e-07
TCGA-HU-A4H6-01A-11D-A25D-08	145	144	1	104	6.896552e-03	coding only	1	28836835	...	40	103	145	1.387115e-06	3.571821e-06	5.028291e-06	-5.298580e+00	...	1	28780638	...	3.474558e-08
TCGA-HU-A4H8-01A-11D-A25D-08	1467	1442	25	1107	1.704158e-02	coding only	1	28836835	...	335	847	1465	1.161709e-05	2.937216e-05	5.080308e-05	-4.294110e+00	...	258	28780638	...	8.964360e-06
TCGA-HU-A4HB-01A-12D-A25D-08	16	15	1	13	6.250000e-02	coding only	1	28836835	...	2	13	16	6.935574e-08	4.508123e-07	5.548459e-07	-6.255828e+00	...	0	28780638	...	0
TCGA-HU-A4HD-01A-11D-A25D-08	222	216	6	164	2.702703e-02	coding only	1	28836835	...	52	158	222	1.803249e-06	5.479103e-06	7.698487e-06	-5.113595e+00	...	6	28780638	...	2.084735e-07
TCGA-IN-7806-01A-11D-2053-08	89	88	1	69	1.123596e-02	coding only	1	28836835	...	19	65	89	6.588795e-07	2.254062e-06	3.086330e-06	-5.510558e+00	...	4	28780638	...	1.389823e-07
TCGA-IN-7808-01A-11D-2201-08	135	131	4	103	2.962963e-02	coding only	1	28836835	...	28	96	135	9.709803e-07	3.329075e-06	4.681512e-06	-5.329614e+00	...	7	28780638	...	2.432191e-07
TCGA-IN-8462-01A-11D-2340-08	160	157	3	122	1.875000e-02	coding only	1	28836835	...	35	111	160	1.213725e-06	3.849244e-06	5.548459e-06	-5.255828e+00	...	11	28780638	...	3.822014e-07
TCGA-IN-8663-01A-11D-2394-08	199	198	1	148	5.025126e-03	coding only	1	28836835	...	50	140	198	1.733893e-06	4.854902e-06	6.866218e-06	-5.163282e+00	...	7	28780638	...	2.432191e-07
TCGA-IN-A6RI-01A-11D-A32N-08	113	111	2	83	1.769912e-02	coding only	1	28836835	...	28	82	113	9.709803e-07	2.843585e-06	3.918599e-06	-5.406869e+00	...	1	28780638	...	3.474558e-08
TCGA-IN-A6RJ-01A-21D-A33T-08	162	162	0	118	0	coding only	1	28836835	...	44	109	162	1.525826e-06	3.779888e-06	5.617815e-06	-5.250433e+00	...	9	28780638	...	3.127102e-07
TCGA-IN-A6RL-01A-11D-A32N-08	528	520	8	405	1.515152e-02	coding only	1	28836835	...	115	390	528	3.987955e-06	1.352437e-05	1.830992e-05	-4.737314e+00	...	15	28780638	...	5.211837e-07
TCGA-IN-A6RN-01A-12D-A33T-08	133	132	1	96	7.518797e-03	coding only	1	28836835	...	36	94	133	1.248403e-06	3.259720e-06	4.612157e-06	-5.336096e+00	...	2	28780638	...	6.949116e-08
TCGA-IN-A6RO-01A-12D-A33T-08	330	326	4	259	1.212121e-02	coding only	1	28836835	...	67	244	330	2.323417e-06	8.461400e-06	1.144370e-05	-4.941434e+00	...	15	28780638	...	5.211837e-07
TCGA-IN-A6RP-01A-21D-A33T-08	204	200	4	160	1.960784e-02	coding only	1	28836835	...	40	143	204	1.387115e-06	4.958935e-06	7.074285e-06	-5.150317e+00	...	17	28780638	...	5.906749e-07
TCGA-IN-A6RR-01A-12D-A32N-08	189	186	3	137	1.587302e-02	coding only	1	28836835	...	49	128	189	1.699216e-06	4.438767e-06	6.554117e-06	-5.183486e+00	...	9	28780638	...	3.127102e-07
TCGA-IN-A6RS-01A-12D-A34U-08	114	113	1	82	8.771930e-03	coding only	1	28836835	...	31	77	114	1.075014e-06	2.670196e-06	3.953277e-06	-5.403043e+00	...	5	28780638	...	1.737279e-07
TCGA-IN-A7NR-01A-11D-A34U-08	89	88	1	66	1.123596e-02	coding only	1	28836835	...	22	64	89	7.629131e-07	2.219384e-06	3.086330e-06	-5.510558e+00	...	2	28780638	...	6.949116e-08
TCGA-IN-A7NT-01A-21D-A34U-08	128	126	2	90	1.562500e-02	coding only	1	28836835	...	36	80	128	1.248403e-06	2.774230e-06	4.438767e-06	-5.352738e+00	...	10	28780638	...	3.474558e-07
TCGA-IN-A7NU-01A-22D-A34U-08	99	97	2	73	2.020202e-02	coding only	1	28836835	...	24	68	99	8.322689e-07	2.358095e-06	3.433109e-06	-5.464312e+00	...	5	28780638	...	1.737279e-07
TCGA-IN-AB1V-01A-21D-A410-08	67	65	2	42	2.985075e-02	coding only	1	28836835	...	23	38	67	7.975910e-07	1.317759e-06	2.323417e-06	-5.633873e+00	...	4	28780638	...	1.389823e-07
TCGA-IN-AB1X-01A-11D-A397-08	126	124	2	104	1.587302e-02	coding only	1	28836835	...	20	98	126	6.935574e-07	3.398431e-06	4.369412e-06	-5.359577e+00	...	6	28780638	...	2.084735e-07
TCGA-IP-7968-01A-11D-2201-08	121	118	3	96	2.479339e-02	coding only	1	28836835	...	22	92	121	7.629131e-07	3.190364e-06	4.196022e-06	-5.377162e+00	...	4	28780638	...	1.389823e-07
TCGA-KB-A6F5-01A-12D-A33T-08	76	75	1	55	1.315789e-02	coding only	1	28836835	...	20	49	76	6.935574e-07	1.699216e-06	2.635518e-06	-5.579134e+00	...	6	28780638	...	2.084735e-07
TCGA-KB-A6F7-01A-12D-A32N-08	125	123	2	97	1.600000e-02	coding only	1	28836835	...	26	87	125	9.016246e-07	3.016975e-06	4.334734e-06	-5.363038e+00	...	10	28780638	...	3.474558e-07
TCGA-KB-A93G-01A-11D-A397-08	91	88	3	67	3.296703e-02	coding only	1	28836835	...	21	65	91	7.282353e-07	2.254062e-06	3.155686e-06	-5.500906e+00	...	2	28780638	...	6.949116e-08
TCGA-KB-A93J-01A-11D-A397-08	161	158	3	147	1.863354e-02	coding only	1	28836835	...	11	38	161	3.814566e-07	1.317759e-06	5.583137e-06	-5.253122e+00	...	109	28780638	...	3.787268e-06
TCGA-MX-A5UG-01A-21D-A31L-08	50	50	0	39	0	coding only	1	28836835	...	11	38	50	3.814566e-07	1.317759e-06	1.733893e-06	-5.760978e+00	...	1	28780638	...	3.474558e-08
TCGA-MX-A5UJ-01A-11D-A31L-08	1768	1737	31	1344	1.753394e-02	coding only	1	28836835	...	393	992	1768	1.362840e-05	3.440045e-05	6.131047e-05	-4.212465e+00	...	352	28780638	...	1.223044e-05
TCGA-MX-A663-01A-11D-A31L-08	95	94	1	79	1.052632e-02	coding only	1	28836835	...	15	76	95	5.201680e-07	2.635518e-06	3.294398e-06	-5.482224e+00	...	3	28780638	...	1.042367e-07
TCGA-MX-A666-01A-11D-A31L-08	132	131	1	102	7.575758e-03	coding only	1	28836835	...	29	92	132	1.005658e-06	3.190364e-06	4.577479e-06	-5.339374e+00	...	10	28780638	...	3.474558e-07
TCGA-R5-A7O7-01A-11D-A33T-08	154	148	6	113	3.896104e-02	exome+100bp flanks	2	35877302	...	35	105	154	9.755472e-07	2.926641e-06	4.292407e-06	-5.367299e+00	...	8	32156043	...	2.487868e-07
TCGA-R5-A7ZE-01B-11D-A34U-08	157	157	0	116	0	coding only	1	28836835	...	40	108	156	1.387115e-06	3.745210e-06	5.409748e-06	-5.266823e+00	...	8	28780638	...	2.779647e-07
TCGA-R5-A7ZF-01A-11D-A34U-08	60	60	0	46	0	coding only	1	28836835	...	14	42	60	4.854902e-07	1.456471e-06	2.080672e-06	-5.681796e+00	...	4	28780638	...	1.389823e-07
TCGA-R5-A7ZI-01A-11D-A34U-08	923	907	16	714	1.733478e-02	coding only	1	28836835	...	193	540	923	6.692829e-06	1.872605e-05	3.200767e-05	-4.494746e+00	...	173	28780638	...	6.010986e-06
TCGA-R5-A7ZR-01A-11D-A34U-08	80	80	0	61	0	coding only	1	28836835	...	19	55	80	6.588795e-07	1.907283e-06	2.774230e-06	-5.556858e+00	...	6	28780638	...	2.084735e-07
TCGA-R5-A804-01A-11D-A364-08	88	87	1	65	1.136364e-02	coding only	1	28836835	...	22	58	88	7.629131e-07	2.011316e-06	3.051653e-06	-5.515465e+00	...	7	28780638	...	2.432191e-07
TCGA-R5-A805-01A-11D-A364-08	135	132	3	105	2.222222e-02	coding only	1	28836835	...	27	103	135	9.363025e-07	3.571821e-06	4.681512e-06	-5.329614e+00	...	2	28780638	...	6.949116e-08
TCGA-RD-A7BS-01A-11D-A32N-08	68	66	2	44	2.941176e-02	coding only	1	28836835	...	22	42	68	7.629131e-07	1.456471e-06	2.358095e-06	-5.627439e+00	...	2	28780638	...	6.949116e-08
TCGA-RD-A7BT-01A-11D-A33T-08	282	279	3	222	1.063830e-02	coding only	1	28836835	...	57	211	282	1.976639e-06	7.317030e-06	9.779159e-06	-5.009698e+00	...	11	28780638	...	3.822014e-07
TCGA-RD-A7BW-01A-11D-A32N-08	89	88	1	66	1.123596e-02	coding only	1	28836835	...	22	64	89	7.629131e-07	2.219384e-06	3.086330e-06	-5.510558e+00	...	2	28780638	...	6.949116e-08
TCGA-RD-A7C1-01A-11D-A32N-08	319	314	5	252	1.567398e-02	coding only	1	28836835	...	62	243	319	2.150028e-06	8.426722e-06	1.106224e-05	-4.956157e+00	...	9	28780638	...	3.127102e-07
TCGA-RD-A8MV-01A-11D-A364-08	77	77	0	69	0	coding only	1	28836835	...	8	60	77	2.774230e-07	2.080672e-06	2.670196e-06	-5.573457e+00	...	9	28780638	...	3.127102e-07
TCGA-RD-A8MW-01A-11D-A364-08	88	88	0	68	0	coding only	1	28836835	...	20	58	88	6.935574e-07	2.011316e-06	3.051653e-06	-5.515465e+00	...	10	28780638	...	3.474558e-07
TCGA-RD-A8N0-01A-12D-A364-08	8	7	1	6	1.250000e-01	coding only	1	28836835	...	1	5	8	3.467787e-08	1.733893e-07	2.774230e-07	-6.556858e+00	...	1	28780638	...	3.474558e-08
TCGA-RD-A8N1-01A-12D-A364-08	111	109	2	91	1.801802e-02	coding only	1	28836835	...	18	85	111	6.242017e-07	2.947619e-06	3.849244e-06	-5.414625e+00	...	6	28780638	...	2.084735e-07
TCGA-RD-A8N2-01A-12D-A364-08	6	6	0	4	0	coding only	1	28836835	...	2	2	6	6.935574e-08	6.935574e-08	2.080672e-07	-6.681796e+00	...	2	28780638	...	6.949116e-08
TCGA-RD-A8N4-01A-21D-A364-08	5	5	0	4	0	coding only	1	28836835	...	1	2	5	3.467787e-08	6.935574e-08	1.733893e-07	-6.760978e+00	...	2	28780638	...	6.949116e-08
TCGA-RD-A8N5-01A-12D-A364-08	38	38	0	28	0	coding only	1	28836835	...	10	26	38	3.467787e-07	9.016246e-07	1.317759e-06	-5.880164e+00	...	2	28780638	...	6.949116e-08
TCGA-RD-A8N6-01A-11D-A364-08	164	164	0	124	0	coding only	1	28836835	...	40	113	164	1.387115e-06	3.918599e-06	5.687171e-06	-5.245104e+00	...	11	28780638	...	3.822014e-07
TCGA-RD-A8N9-01A-12D-A397-08	147	146	1	101	6.802721e-03	coding only	1	28836835	...	44	94	146	1.525826e-06	3.259720e-06	5.062969e-06	-5.295595e+00	...	7	28780638	...	2.432191e-07
TCGA-SW-A7EA-01A-12D-A34U-08	683	667	16	525	2.342606e-02	coding only	1	28836835	...	142	385	683	4.924257e-06	1.335098e-05	2.368498e-05	-4.625527e+00	...	140	28780638	...	4.864381e-06
TCGA-SW-A7EB-01A-11D-A34U-08	142	141	1	116	7.042254e-03	coding only	1	28836835	...	25	111	142	8.669467e-07	3.849244e-06	4.924257e-06	-5.307659e+00	...	5	28780638	...	1.737279e-07
TCGA-VQ-A8DL-01A-11D-A364-08	157	155	2	140	1.273885e-02	coding only	1	28836835	...	15	42	157	5.201680e-07	1.456471e-06	5.444426e-06	-5.264048e+00	...	98	28780638	...	3.405067e-06
TCGA-VQ-A8DT-01A-11D-A364-08	188	185	3	155	1.595745e-02	coding only	1	28836835	...	30	142	187	1.040336e-06	4.924257e-06	6.484762e-06	-5.188106e+00	...	12	28780638	...	4.169470e-07
TCGA-VQ-A8DU-01A-11D-A364-08	159	157	2	128	1.257862e-02	coding only	1	28836835	...	29	120	159	1.005658e-06	4.161344e-06	5.513781e-06	-5.258550e+00	...	8	28780638	...	2.779647e-07
TCGA-VQ-A8DV-01A-12D-A364-08	76	76	0	61	0	coding only	1	28836835	...	15	52	76	5.201680e-07	1.803249e-06	2.635518e-06	-5.579134e+00	...	9	28780638	...	3.127102e-07
TCGA-VQ-A8DZ-01A-11D-A364-08	86	85	1	70	1.162791e-02	coding only	1	28836835	...	15	64	86	5.201680e-07	2.219384e-06	2.982297e-06	-5.525449e+00	...	6	28780638	...	2.084735e-07
TCGA-VQ-A8E2-01A-11D-A364-08	120	120	0	97	0	coding only	1	28836835	...	23	91	120	7.975910e-07	3.155686e-06	4.161344e-06	-5.380766e+00	...	6	28780638	...	2.084735e-07
TCGA-VQ-A8E7-01B-11D-A410-08	109	106	3	73	2.752294e-02	coding only	1	28836835	...	33	68	109	1.144370e-06	2.358095e-06	3.779888e-06	-5.422521e+00	...	5	28780638	...	1.737279e-07
TCGA-VQ-A8P2-01A-11D-A364-08	8139	8009	130	6065	1.597248e-02	coding only	1	28836835	...	1943	5641	8137	6.737910e-05	1.956179e-04	2.821738e-04	-3.549483e+00	...	423	28780638	...	1.469738e-05
TCGA-VQ-A8P3-01A-11D-A364-08	303	299	4	239	1.320132e-02	coding only	1	28836835	...	60	223	303	2.080672e-06	7.733165e-06	1.050739e-05	-4.978505e+00	...	16	28780638	...	5.559293e-07
TCGA-VQ-A8PE-01A-11D-A410-08	144	141	3	107	2.083333e-02	coding only	1	28836835	...	34	97	143	1.179048e-06	3.363753e-06	4.958935e-06	-5.304612e+00	...	9	28780638	...	3.127102e-07
TCGA-VQ-A8PK-01A-12D-A410-08	96	95	1	77	1.041667e-02	coding only	1	28836835	...	18	70	96	6.242017e-07	2.427451e-06	3.329075e-06	-5.477676e+00	...	7	28780638	...	2.432191e-07
TCGA-VQ-A8PM-01A-21D-A410-08	61	61	0	44	0	coding only	1	28836835	...	17	37	61	5.895238e-07	1.283081e-06	2.115350e-06	-5.674618e+00	...	7	28780638	...	2.432191e-07
TCGA-VQ-A8PQ-01A-11D-A410-08	22	21	1	16	4.545455e-02	coding only	1	28836835	...	5	13	22	1.733893e-07	4.508123e-07	7.629131e-07	-6.117525e+00	...	3	28780638	...	1.042367e-07
TCGA-VQ-A91Q-01A-12D-A410-08	112	110	2	86	1.785714e-02	coding only	1	28836835	...	24	79	112	8.322689e-07	2.739552e-06	3.883921e-06	-5.410730e+00	...	7	28780638	...	2.432191e-07
TCGA-VQ-A91U-01A-11D-A410-08	159	157	2	118	1.257862e-02	coding only	1	28836835	...	39	114	159	1.352437e-06	3.953277e-06	5.513781e-06	-5.258550e+00	...	4	28780638	...	1.389823e-07
TCGA-VQ-A91V-01A-11D-A410-08	259	258	1	209	3.861004e-03	coding only	1	28836835	...	49	196	259	1.699216e-06	6.796862e-06	8.981568e-06	-5.046648e+00	...	13	28780638	...	4.516926e-07
TCGA-VQ-A92D-01A-11D-A410-08	146	144	2	107	1.369863e-02	coding only	1	28836835	...	37	94	146	1.283081e-06	3.259720e-06	5.062969e-06	-5.295595e+00	...	13	28780638	...	4.516926e-07
TCGA-VQ-A94T-01A-11D-A410-08	88	88	0	64	0	coding only	1	28836835	...	24	58	88	8.322689e-07	2.011316e-06	3.051653e-06	-5.515465e+00	...	6	28780638	...	2.084735e-07
TCGA-VQ-AA64-01A-11D-A410-08	285	277	8	214	2.807018e-02	coding only	1	28836835	...	63	189	285	2.184706e-06	6.554117e-06	9.883193e-06	-5.005103e+00	...	25	28780638	...	8.686395e-07
TCGA-VQ-AA68-01A-11D-A410-08	178	175	3	143	1.685393e-02	coding only	1	28836835	...	32	132	178	1.109692e-06	4.577479e-06	6.172661e-06	-5.209528e+00	...	11	28780638	...	3.822014e-07
TCGA-VQ-AA69-01A-11D-A410-08	71	70	1	53	1.408451e-02	coding only	1	28836835	...	17	47	71	5.895238e-07	1.629860e-06	2.462129e-06	-5.608689e+00	...	6	28780638	...	2.084735e-07
TCGA-VQ-AA6A-01A-11D-A410-08	105	102	3	76	2.857143e-02	coding only	1	28836835	...	26	70	105	9.016246e-07	2.427451e-06	3.641176e-06	-5.438758e+00	...	6	28780638	...	2.084735e-07
TCGA-VQ-AA6B-01A-11D-A410-08	88	88	0	75	0	coding only	1	28836835	...	13	67	88	4.508123e-07	2.323417e-06	3.051653e-06	-5.515465e+00	...	8	28780638	...	2.779647e-07
TCGA-VQ-AA6F-01A-31D-A410-08	54	52	2	44	3.703704e-02	coding only	1	28836835	...	8	39	54	2.774230e-07	1.352437e-06	1.872605e-06	-5.727554e+00	...	5	28780638	...	1.737279e-07
TCGA-VQ-AA6G-01A-11D-A410-08	136	135	1	107	7.352941e-03	coding only	1	28836835	...	28	99	136	9.709803e-07	3.433109e-06	4.716190e-06	-5.326409e+00	...	8	28780638	...	2.779647e-07
TCGA-VQ-AA6I-01A-11D-A410-08	114	113	1	87	8.771930e-03	coding only	1	28836835	...	26	71	114	9.016246e-07	2.462129e-06	3.953277e-06	-5.403043e+00	...	16	28780638	...	5.559293e-07
TCGA-VQ-AA6J-01A-11D-A410-08	147	146	1	107	6.802721e-03	coding only	1	28836835	...	39	97	147	1.352437e-06	3.363753e-06	5.097647e-06	-5.292630e+00	...	10	28780638	...	3.474558e-07
TCGA-VQ-AA6K-01A-11D-A410-08	84	84	0	71	0	coding only	1	28836835	...	13	58	84	4.508123e-07	2.011316e-06	2.912941e-06	-5.535668e+00	...	13	28780638	...	4.516926e-07
TCGA-ZA-A8F6-01A-23D-A364-08	46	46	0	39	0	coding only	1	28836835	...	7	34	46	2.427451e-07	1.179048e-06	1.595182e-06	-5.797190e+00	...	5	28780638	...	1.737279e-07
