name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-2H-A9GF-01A-11D-A37C-09	427	417	10	320	2.341920e-02	coding only	1	28836904	...	93	294	421	3.225034e-06	1.019527e-05	1.459935e-05	-4.835667e+00	...	24	28780707	...	8.338920e-07
TCGA-2H-A9GG-01A-11D-A37C-09	234	227	7	174	2.991453e-02	coding only	1	28836904	...	50	159	226	1.733889e-06	5.513768e-06	7.837180e-06	-5.105840e+00	...	10	28780707	...	3.474550e-07
TCGA-2H-A9GH-01A-11D-A37C-09	269	264	5	203	1.858736e-02	coding only	1	28836904	...	59	190	264	2.045989e-06	6.588779e-06	9.154936e-06	-5.038345e+00	...	11	28780707	...	3.822005e-07
TCGA-2H-A9GI-01A-11D-A37C-09	357	351	6	273	1.680672e-02	coding only	1	28836904	...	77	250	353	2.670190e-06	8.669447e-06	1.224126e-05	-4.912174e+00	...	20	28780707	...	6.949100e-07
TCGA-2H-A9GJ-01A-11D-A37C-09	212	207	5	168	2.358491e-02	coding only	1	28836904	...	38	159	209	1.317756e-06	5.513768e-06	7.247657e-06	-5.139802e+00	...	7	28780707	...	2.432185e-07
TCGA-2H-A9GK-01A-11D-A37C-09	402	398	4	305	9.950249e-03	coding only	1	28836904	...	91	288	391	3.155679e-06	9.987203e-06	1.355901e-05	-4.867772e+00	...	8	28780707	...	2.779640e-07
TCGA-2H-A9GL-01A-12D-A37C-09	319	314	5	247	1.567398e-02	coding only	1	28836904	...	65	230	308	2.254056e-06	7.975891e-06	1.068076e-05	-4.971398e+00	...	10	28780707	...	3.474550e-07
TCGA-2H-A9GM-01A-11D-A37C-09	235	230	5	176	2.127660e-02	coding only	1	28836904	...	54	164	232	1.872600e-06	5.687157e-06	8.045246e-06	-5.094461e+00	...	9	28780707	...	3.127095e-07
TCGA-2H-A9GN-01A-11D-A37C-09	219	216	3	174	1.369863e-02	coding only	1	28836904	...	42	164	217	1.456467e-06	5.687157e-06	7.525080e-06	-5.123489e+00	...	8	28780707	...	2.779640e-07
TCGA-2H-A9GO-01A-11D-A37C-09	252	242	10	178	3.968254e-02	exome+100bp flanks	2	35888610	...	64	164	247	1.783296e-06	4.569695e-06	6.882406e-06	-5.162260e+00	...	9	32165001	...	2.798072e-07
TCGA-2H-A9GQ-01A-11D-A37C-09	240	236	4	170	1.666667e-02	coding only	1	28836904	...	66	151	235	2.288734e-06	5.236346e-06	8.149280e-06	-5.088881e+00	...	14	28780707	...	4.864370e-07
TCGA-2H-A9GR-01A-12D-A37C-09	450	442	8	359	1.777778e-02	coding only	1	28836904	...	83	338	443	2.878256e-06	1.172109e-05	1.536226e-05	-4.813545e+00	...	14	28780707	...	4.864370e-07
TCGA-B7-5816-01A-21D-1600-08	1583	1567	16	1265	1.010739e-02	coding only	1	28836904	...	302	994	1583	1.047269e-05	3.446972e-05	5.489494e-05	-4.260468e+00	...	271	28780707	...	9.416030e-06
TCGA-B7-5818-01A-11D-1600-08	421	413	8	325	1.900238e-02	coding only	1	28836904	...	88	313	421	3.051645e-06	1.085415e-05	1.459935e-05	-4.835667e+00	...	12	28780707	...	4.169460e-07
TCGA-B7-A5TI-01A-11D-A31L-08	725	714	11	556	1.517241e-02	coding only	1	28836904	...	158	443	725	5.479090e-06	1.536226e-05	2.514140e-05	-4.599611e+00	...	113	28780707	...	3.926241e-06
TCGA-B7-A5TJ-01A-11D-A31L-08	295	291	4	214	1.355932e-02	coding only	1	28836904	...	77	189	295	2.670190e-06	6.554102e-06	1.022995e-05	-4.990127e+00	...	24	28780707	...	8.338920e-07
TCGA-B7-A5TK-01A-12D-A31L-08	66	65	1	46	1.515152e-02	coding only	1	28836904	...	19	43	66	6.588779e-07	1.491145e-06	2.288734e-06	-5.640405e+00	...	3	28780707	...	1.042365e-07
TCGA-B7-A5TN-01A-21D-A31L-08	104	102	2	78	1.923077e-02	coding only	1	28836904	...	24	68	104	8.322669e-07	2.358089e-06	3.606490e-06	-5.442915e+00	...	10	28780707	...	3.474550e-07
TCGA-BR-4183-01A-02D-1126-08	52	52	0	36	0	coding only	1	28836904	...	16	35	52	5.548446e-07	1.213723e-06	1.803245e-06	-5.743945e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-4184-01A-01D-1126-08	4610	4559	51	3424	1.106291e-02	coding only	1	28836904	...	1133	3014	4604	3.928993e-05	1.045188e-04	1.596565e-04	-3.796813e+00	...	406	28780707	...	1.410667e-05
TCGA-BR-4187-01A-01D-1126-08	33	33	0	25	0	coding only	1	28836904	...	8	24	33	2.774223e-07	8.322669e-07	1.144367e-06	-5.941435e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-4188-01A-01D-1126-08	84	82	2	64	2.380952e-02	coding only	1	28836904	...	18	62	84	6.242002e-07	2.150023e-06	2.912934e-06	-5.535669e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-4191-01A-02D-1126-08	225	219	6	175	2.666667e-02	coding only	1	28836904	...	44	161	224	1.525823e-06	5.583124e-06	7.767824e-06	-5.109701e+00	...	13	28780707	...	4.516915e-07
TCGA-BR-4201-01A-01D-1126-08	1765	1734	31	1363	1.756374e-02	coding only	1	28836904	...	371	995	1764	1.286546e-05	3.450440e-05	6.117162e-05	-4.213450e+00	...	367	28780707	...	1.275160e-05
TCGA-BR-4253-01A-01D-1126-08	104	104	0	77	0	coding only	1	28836904	...	26	72	103	9.016224e-07	2.496801e-06	3.571812e-06	-5.447111e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-4255-01A-01D-1126-08	70	66	4	46	5.714286e-02	coding only	1	28836904	...	20	44	70	6.935557e-07	1.525823e-06	2.427445e-06	-5.614851e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-4256-01A-01D-1126-08	1241	1229	12	943	9.669621e-03	coding only	1	28836904	...	284	751	1239	9.848491e-06	2.604302e-05	4.296578e-05	-4.366877e+00	...	191	28780707	...	6.636390e-06
TCGA-BR-4257-01A-01D-1126-08	1334	1312	22	962	1.649175e-02	coding only	1	28836904	...	348	771	1332	1.206787e-05	2.673657e-05	4.619081e-05	-4.335444e+00	...	191	28780707	...	6.636390e-06
TCGA-BR-4267-01A-01D-1126-08	109	108	1	81	9.174312e-03	coding only	1	28836904	...	27	77	108	9.363002e-07	2.670190e-06	3.745201e-06	-5.426525e+00	...	3	28780707	...	1.042365e-07
TCGA-BR-4279-01A-01D-1126-08	63	62	1	38	1.587302e-02	coding only	1	28836904	...	24	33	63	8.322669e-07	1.144367e-06	2.184701e-06	-5.660608e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-4280-01A-01D-1126-08	821	808	13	644	1.583435e-02	coding only	1	28836904	...	163	492	819	5.652479e-06	1.706147e-05	2.840111e-05	-4.546665e+00	...	151	28780707	...	5.246570e-06
TCGA-BR-4292-01A-01D-1126-08	1623	1595	28	1217	1.725200e-02	coding only	1	28836904	...	377	910	1618	1.307353e-05	3.155679e-05	5.610866e-05	-4.250970e+00	...	304	28780707	...	1.056263e-05
TCGA-BR-4294-01A-01D-1126-08	35	34	1	27	2.857143e-02	coding only	1	28836904	...	7	26	35	2.427445e-07	9.016224e-07	1.213723e-06	-5.915881e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-4357-01A-01D-1158-08	249	245	4	193	1.606426e-02	coding only	1	28836904	...	52	185	249	1.803245e-06	6.415391e-06	8.634769e-06	-5.063749e+00	...	8	28780707	...	2.779640e-07
TCGA-BR-4361-01A-01D-1158-08	3043	2986	57	2285	1.873151e-02	coding only	1	28836904	...	700	1890	3042	2.427445e-05	6.554102e-05	1.054898e-04	-3.976789e+00	...	395	28780707	...	1.372447e-05
TCGA-BR-4362-01A-01D-1158-08	1829	1790	39	1405	2.132313e-02	coding only	1	28836904	...	385	1050	1829	1.335095e-05	3.641168e-05	6.342567e-05	-4.197735e+00	...	355	28780707	...	1.233465e-05
TCGA-BR-4363-01A-01D-1158-08	676	666	10	530	1.479290e-02	coding only	1	28836904	...	136	364	676	4.716179e-06	1.262271e-05	2.344218e-05	-4.630002e+00	...	166	28780707	...	5.767753e-06
TCGA-BR-4366-01A-01D-1158-08	151	149	2	113	1.324503e-02	coding only	1	28836904	...	36	111	151	1.248400e-06	3.849234e-06	5.236346e-06	-5.280972e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-4368-01A-01D-1158-08	1558	1536	22	1175	1.412067e-02	coding only	1	28836904	...	361	908	1558	1.251868e-05	3.148743e-05	5.402799e-05	-4.267381e+00	...	267	28780707	...	9.277048e-06
TCGA-BR-4369-01A-01D-1158-08	191	189	2	144	1.047120e-02	coding only	1	28836904	...	45	142	191	1.560500e-06	4.924246e-06	6.623457e-06	-5.178915e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-4370-01A-01D-1158-08	1315	1295	20	1004	1.520913e-02	coding only	1	28836904	...	291	763	1315	1.009124e-05	2.645915e-05	4.560129e-05	-4.341023e+00	...	241	28780707	...	8.373665e-06
TCGA-BR-4371-01A-01D-1158-08	174	173	1	127	5.747126e-03	coding only	1	28836904	...	46	127	174	1.595178e-06	4.404079e-06	6.033935e-06	-5.219399e+00	...	0	28780707	...	0
TCGA-BR-6452-01A-12D-1800-08	8303	8174	129	6330	1.553655e-02	coding only	1	28836904	...	1844	5542	8302	6.394584e-05	1.921843e-04	2.878950e-04	-3.540766e+00	...	787	28780707	...	2.734471e-05
TCGA-BR-6453-01A-11D-1800-08	211	209	2	160	9.478673e-03	coding only	1	28836904	...	49	158	210	1.699212e-06	5.479090e-06	7.282335e-06	-5.137729e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-6454-01A-11D-1800-08	161	159	2	121	1.242236e-02	coding only	1	28836904	...	38	116	161	1.317756e-06	4.022623e-06	5.583124e-06	-5.253123e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-6455-01A-11D-1800-08	110	106	4	74	3.636364e-02	coding only	1	28836904	...	32	72	110	1.109689e-06	2.496801e-06	3.814557e-06	-5.418556e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-6456-01A-11D-1800-08	48	47	1	33	2.083333e-02	coding only	1	28836904	...	14	30	48	4.854890e-07	1.040334e-06	1.664534e-06	-5.778707e+00	...	3	28780707	...	1.042365e-07
TCGA-BR-6457-01A-21D-1800-08	130	128	2	94	1.538462e-02	coding only	1	28836904	...	34	92	130	1.179045e-06	3.190356e-06	4.508112e-06	-5.346005e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-6458-01A-11D-1800-08	327	322	5	251	1.529052e-02	coding only	1	28836904	...	71	245	327	2.462123e-06	8.496058e-06	1.133964e-05	-4.945401e+00	...	6	28780707	...	2.084730e-07
TCGA-BR-6563-01A-13D-2053-08	89	89	0	69	0	coding only	1	28836904	...	20	68	89	6.935557e-07	2.358089e-06	3.086323e-06	-5.510559e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-6564-01A-12D-1882-08	38	35	3	27	7.894737e-02	coding only	1	28836904	...	8	22	38	2.774223e-07	7.629113e-07	1.317756e-06	-5.880165e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-6565-01A-11D-1800-08	162	159	3	129	1.851852e-02	coding only	1	28836904	...	30	127	162	1.040334e-06	4.404079e-06	5.617801e-06	-5.250434e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-6566-01A-11D-1800-08	1092	1069	23	822	2.106227e-02	coding only	1	28836904	...	247	645	1091	8.565413e-06	2.236717e-05	3.783347e-05	-4.422124e+00	...	176	28780707	...	6.115208e-06
TCGA-BR-6705-01A-12D-1882-08	114	112	2	87	1.754386e-02	coding only	1	28836904	...	25	85	114	8.669447e-07	2.947612e-06	3.953268e-06	-5.403044e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-6706-01A-11D-1882-08	226	224	2	181	8.849558e-03	coding only	1	28836904	...	43	176	226	1.491145e-06	6.103290e-06	7.837180e-06	-5.105840e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-6707-01A-11D-1882-08	75	74	1	59	1.333333e-02	coding only	1	28836904	...	15	57	75	5.201668e-07	1.976634e-06	2.600834e-06	-5.584887e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-6709-01A-11D-1882-08	44	43	1	35	2.272727e-02	coding only	1	28836904	...	8	34	44	2.774223e-07	1.179045e-06	1.525823e-06	-5.816496e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-6710-01A-11D-1882-08	5	5	0	4	0	coding only	1	28836904	...	1	3	5	3.467779e-08	1.040334e-07	1.733889e-07	-6.760979e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-6801-01A-11D-1882-08	55	55	0	40	0	coding only	1	28836904	...	15	38	55	5.201668e-07	1.317756e-06	1.907278e-06	-5.719586e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-6802-01A-11D-1882-08	577	570	7	427	1.213172e-02	coding only	1	28836904	...	143	338	577	4.958923e-06	1.172109e-05	2.000908e-05	-4.698773e+00	...	89	28780707	...	3.092349e-06
TCGA-BR-6803-01A-11D-1882-08	21	21	0	15	0	coding only	1	28836904	...	6	13	21	2.080667e-07	4.508112e-07	7.282335e-07	-6.137729e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-6852-01A-11D-1882-08	1319	1305	14	1025	1.061410e-02	coding only	1	28836904	...	280	784	1319	9.709780e-06	2.718738e-05	4.574000e-05	-4.339704e+00	...	241	28780707	...	8.373665e-06
TCGA-BR-7196-01A-11D-2053-08	83	80	3	62	3.614458e-02	coding only	1	28836904	...	18	59	83	6.242002e-07	2.045989e-06	2.878256e-06	-5.540871e+00	...	3	28780707	...	1.042365e-07
TCGA-BR-7197-01A-11D-2201-08	225	221	4	172	1.777778e-02	coding only	1	28836904	...	49	167	225	1.699212e-06	5.791190e-06	7.802502e-06	-5.107766e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-7703-01A-11D-2053-08	849	839	10	653	1.177856e-02	coding only	1	28836904	...	186	518	849	6.450068e-06	1.796309e-05	2.944144e-05	-4.531041e+00	...	135	28780707	...	4.690642e-06
TCGA-BR-7704-01A-11D-2053-08	399	390	9	308	2.255639e-02	coding only	1	28836904	...	82	296	399	2.843578e-06	1.026462e-05	1.383644e-05	-4.858976e+00	...	12	28780707	...	4.169460e-07
TCGA-BR-7707-01A-11D-2053-08	1743	1724	19	1326	1.090075e-02	coding only	1	28836904	...	398	1053	1743	1.380176e-05	3.651571e-05	6.044338e-05	-4.218651e+00	...	273	28780707	...	9.485521e-06
TCGA-BR-7715-01A-11D-2053-08	158	155	3	122	1.898734e-02	coding only	1	28836904	...	33	115	158	1.144367e-06	3.987945e-06	5.479090e-06	-5.261292e+00	...	6	28780707	...	2.084730e-07
TCGA-BR-7716-01A-21D-2053-08	198	197	1	156	5.050505e-03	coding only	1	28836904	...	41	153	198	1.421789e-06	5.305701e-06	6.866202e-06	-5.163283e+00	...	3	28780707	...	1.042365e-07
TCGA-BR-7717-01A-11D-2053-08	166	164	2	115	1.204819e-02	coding only	1	28836904	...	49	111	166	1.699212e-06	3.849234e-06	5.756513e-06	-5.239841e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-7722-01A-31D-2201-08	55	53	2	40	3.636364e-02	coding only	1	28836904	...	13	38	55	4.508112e-07	1.317756e-06	1.907278e-06	-5.719586e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-7723-01A-11D-2053-08	192	184	8	135	4.166667e-02	exome+100bp flanks	2	35888610	...	49	129	191	1.365336e-06	3.594455e-06	5.322023e-06	-5.273923e+00	...	5	32165001	...	1.554485e-07
TCGA-BR-7851-01A-11D-2201-08	1787	1763	24	1339	1.343033e-02	coding only	1	28836904	...	423	1028	1785	1.466870e-05	3.564876e-05	6.189985e-05	-4.208310e+00	...	311	28780707	...	1.080585e-05
TCGA-BR-7901-01A-11D-2201-08	215	210	5	150	2.325581e-02	coding only	1	28836904	...	60	146	215	2.080667e-06	5.062957e-06	7.455724e-06	-5.127510e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-7957-01A-11D-2201-08	63	62	1	52	1.587302e-02	coding only	1	28836904	...	10	49	63	3.467779e-07	1.699212e-06	2.184701e-06	-5.660608e+00	...	3	28780707	...	1.042365e-07
TCGA-BR-7958-01A-21D-2340-08	193	187	6	151	3.108808e-02	exome+100bp flanks	2	35888610	...	36	147	193	1.003104e-06	4.096007e-06	5.377751e-06	-5.269399e+00	...	4	32165001	...	1.243588e-07
TCGA-BR-7959-01A-11D-2340-08	114	112	2	92	1.754386e-02	coding only	1	28836904	...	20	91	114	6.935557e-07	3.155679e-06	3.953268e-06	-5.403044e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-8058-01A-31D-2340-08	66	64	2	52	3.030303e-02	coding only	1	28836904	...	12	52	66	4.161334e-07	1.803245e-06	2.288734e-06	-5.640405e+00	...	0	28780707	...	0
TCGA-BR-8059-01A-11D-2340-08	887	878	9	691	1.014656e-02	coding only	1	28836904	...	187	585	887	6.484746e-06	2.028651e-05	3.075920e-05	-4.512025e+00	...	106	28780707	...	3.683023e-06
TCGA-BR-8060-01A-11D-2340-08	238	237	1	173	4.201681e-03	coding only	1	28836904	...	64	168	238	2.219378e-06	5.825868e-06	8.253313e-06	-5.083372e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-8077-01A-11D-2340-08	152	151	1	116	6.578947e-03	coding only	1	28836904	...	35	112	152	1.213723e-06	3.883912e-06	5.271024e-06	-5.278105e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-8078-01A-11D-2340-08	1952	1916	36	1534	1.844262e-02	coding only	1	28836904	...	382	1052	1951	1.324691e-05	3.648103e-05	6.765636e-05	-4.169691e+00	...	482	28780707	...	1.674733e-05
TCGA-BR-8080-01A-11D-2340-08	208	205	3	162	1.442308e-02	coding only	1	28836904	...	43	160	208	1.491145e-06	5.548446e-06	7.212980e-06	-5.141885e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-8081-01A-11D-2340-08	1178	1161	17	879	1.443124e-02	coding only	1	28836904	...	282	683	1178	9.779136e-06	2.368493e-05	4.085043e-05	-4.388803e+00	...	194	28780707	...	6.740627e-06
TCGA-BR-8284-01A-11D-2340-08	446	440	6	339	1.345291e-02	coding only	1	28836904	...	101	299	446	3.502456e-06	1.036866e-05	1.546629e-05	-4.810614e+00	...	40	28780707	...	1.389820e-06
TCGA-BR-8285-01A-11D-2340-08	107	105	2	82	1.869159e-02	coding only	1	28836904	...	23	79	107	7.975891e-07	2.739545e-06	3.710523e-06	-5.430565e+00	...	3	28780707	...	1.042365e-07
TCGA-BR-8286-01A-12D-2340-08	167	165	2	114	1.197605e-02	coding only	1	28836904	...	51	106	166	1.768567e-06	3.675845e-06	5.756513e-06	-5.239841e+00	...	8	28780707	...	2.779640e-07
TCGA-BR-8289-01A-11D-2340-08	241	238	3	193	1.244813e-02	coding only	1	28836904	...	45	185	241	1.560500e-06	6.415391e-06	8.357347e-06	-5.077932e+00	...	8	28780707	...	2.779640e-07
TCGA-BR-8291-01A-11D-2340-08	40	38	2	33	5.000000e-02	coding only	1	28836904	...	5	31	40	1.733889e-07	1.075011e-06	1.387111e-06	-5.857889e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-8295-01A-11D-2340-08	82	77	5	57	6.097561e-02	coding only	1	28836904	...	20	51	82	6.935557e-07	1.768567e-06	2.843578e-06	-5.546135e+00	...	6	28780707	...	2.084730e-07
TCGA-BR-8297-01A-12D-2340-08	269	265	4	207	1.486989e-02	coding only	1	28836904	...	58	196	269	2.011312e-06	6.796846e-06	9.328325e-06	-5.030196e+00	...	11	28780707	...	3.822005e-07
TCGA-BR-8360-01A-11D-2340-08	1154	1139	15	867	1.299827e-02	coding only	1	28836904	...	272	660	1154	9.432358e-06	2.288734e-05	4.001817e-05	-4.397743e+00	...	206	28780707	...	7.157573e-06
TCGA-BR-8361-01A-11D-2340-08	1849	1819	30	1402	1.622499e-02	coding only	1	28836904	...	417	1094	1847	1.446064e-05	3.793750e-05	6.404987e-05	-4.193482e+00	...	306	28780707	...	1.063212e-05
TCGA-BR-8363-01A-11D-2340-08	1521	1488	33	1180	2.169625e-02	coding only	1	28836904	...	308	878	1521	1.068076e-05	3.044710e-05	5.274491e-05	-4.277819e+00	...	302	28780707	...	1.049314e-05
TCGA-BR-8364-01A-11D-2340-08	27	26	1	23	3.703704e-02	coding only	1	28836904	...	3	21	27	1.040334e-07	7.282335e-07	9.363002e-07	-6.028585e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-8365-01A-21D-2340-08	43	43	0	34	0	coding only	1	28836904	...	9	32	43	3.121001e-07	1.109689e-06	1.491145e-06	-5.826480e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-8366-01A-11D-2340-08	222	218	4	178	1.801802e-02	coding only	1	28836904	...	40	177	222	1.387111e-06	6.137968e-06	7.698469e-06	-5.113596e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-8367-01A-11D-2340-08	87	86	1	67	1.149425e-02	coding only	1	28836904	...	19	63	87	6.588779e-07	2.184701e-06	3.016967e-06	-5.520429e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-8368-01A-11D-2340-08	1268	1245	23	941	1.813880e-02	coding only	1	28836904	...	304	684	1267	1.054205e-05	2.371961e-05	4.393676e-05	-4.357172e+00	...	255	28780707	...	8.860102e-06
TCGA-BR-8369-01A-11D-2340-08	236	233	3	186	1.271186e-02	coding only	1	28836904	...	47	177	236	1.629856e-06	6.137968e-06	8.183958e-06	-5.087037e+00	...	9	28780707	...	3.127095e-07
TCGA-BR-8370-01A-11D-2340-08	148	148	0	106	0	coding only	1	28836904	...	42	99	148	1.456467e-06	3.433101e-06	5.132312e-06	-5.289687e+00	...	7	28780707	...	2.432185e-07
TCGA-BR-8371-01A-11D-2340-08	46	46	0	33	0	coding only	1	28836904	...	13	33	46	4.508112e-07	1.144367e-06	1.595178e-06	-5.797191e+00	...	0	28780707	...	0
TCGA-BR-8372-01A-11D-2340-08	1608	1586	22	1227	1.368159e-02	coding only	1	28836904	...	358	940	1606	1.241465e-05	3.259712e-05	5.569253e-05	-4.254203e+00	...	285	28780707	...	9.902467e-06
TCGA-BR-8373-01A-11D-2340-08	112	111	1	76	8.928571e-03	coding only	1	28836904	...	35	68	112	1.213723e-06	2.358089e-06	3.883912e-06	-5.410731e+00	...	8	28780707	...	2.779640e-07
TCGA-BR-8380-01A-11D-2340-08	97	96	1	78	1.030928e-02	coding only	1	28836904	...	18	74	97	6.242002e-07	2.566156e-06	3.363745e-06	-5.473177e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-8381-01A-11D-2394-08	145	144	1	102	6.896552e-03	coding only	1	28836904	...	42	101	145	1.456467e-06	3.502456e-06	5.028279e-06	-5.298581e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-8382-01A-11D-2394-08	1157	1138	19	881	1.642178e-02	coding only	1	28836904	...	257	677	1157	8.912191e-06	2.347686e-05	4.012220e-05	-4.396615e+00	...	204	28780707	...	7.088082e-06
TCGA-BR-8384-01A-21D-2394-08	58	57	1	46	1.724138e-02	coding only	1	28836904	...	11	44	57	3.814557e-07	1.525823e-06	1.976634e-06	-5.704074e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-8483-01A-31D-2394-08	143	143	0	111	0	coding only	1	28836904	...	32	101	143	1.109689e-06	3.502456e-06	4.958923e-06	-5.304613e+00	...	10	28780707	...	3.474550e-07
TCGA-BR-8484-01A-11D-2394-08	108	107	1	67	9.259259e-03	coding only	1	28836904	...	40	65	108	1.387111e-06	2.254056e-06	3.745201e-06	-5.426525e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-8485-01A-11D-2394-08	360	358	2	280	5.555556e-03	coding only	1	28836904	...	78	273	360	2.704867e-06	9.467036e-06	1.248400e-05	-4.903646e+00	...	7	28780707	...	2.432185e-07
TCGA-BR-8486-01A-31D-2394-08	70	70	0	57	0	coding only	1	28836904	...	13	54	70	4.508112e-07	1.872600e-06	2.427445e-06	-5.614851e+00	...	3	28780707	...	1.042365e-07
TCGA-BR-8487-01A-11D-2394-08	3628	3565	63	2807	1.736494e-02	coding only	1	28836904	...	758	2183	3628	2.628576e-05	7.570161e-05	1.258110e-04	-3.900281e+00	...	623	28780707	...	2.164645e-05
TCGA-BR-8588-01A-11D-2394-08	141	139	2	105	1.418440e-02	coding only	1	28836904	...	34	101	141	1.179045e-06	3.502456e-06	4.889568e-06	-5.310730e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-8589-01A-11D-2394-08	1233	1216	17	994	1.378751e-02	coding only	1	28836904	...	222	983	1232	7.698469e-06	3.408826e-05	4.272303e-05	-4.369338e+00	...	10	28780707	...	3.474550e-07
TCGA-BR-8590-01A-11D-2394-08	148	145	3	113	2.027027e-02	coding only	1	28836904	...	32	108	148	1.109689e-06	3.745201e-06	5.132312e-06	-5.289687e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-8591-01A-11D-2394-08	1800	1762	38	1377	2.111111e-02	coding only	1	28836904	...	385	1016	1798	1.335095e-05	3.523263e-05	6.235066e-05	-4.205159e+00	...	359	28780707	...	1.247363e-05
TCGA-BR-8592-01A-11D-2394-08	49	46	3	36	6.122449e-02	coding only	1	28836904	...	10	35	49	3.467779e-07	1.213723e-06	1.699212e-06	-5.769753e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-8676-01A-11D-2394-08	112	109	3	81	2.678571e-02	coding only	1	28836904	...	28	76	112	9.709780e-07	2.635512e-06	3.883912e-06	-5.410731e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-8677-01A-11D-2394-08	89	89	0	62	0	coding only	1	28836904	...	27	58	89	9.363002e-07	2.011312e-06	3.086323e-06	-5.510559e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-8678-01A-11D-2394-08	134	133	1	104	7.462687e-03	coding only	1	28836904	...	29	97	134	1.005656e-06	3.363745e-06	4.646823e-06	-5.332844e+00	...	7	28780707	...	2.432185e-07
TCGA-BR-8679-01A-11D-2394-08	183	182	1	141	5.464481e-03	coding only	1	28836904	...	41	134	183	1.421789e-06	4.646823e-06	6.346035e-06	-5.197498e+00	...	7	28780707	...	2.432185e-07
TCGA-BR-8680-01A-11D-2394-08	6762	6655	107	5309	1.582372e-02	coding only	1	28836904	...	1345	5281	6756	4.664162e-05	1.831334e-04	2.342831e-04	-3.630259e+00	...	23	28780707	...	7.991465e-07
TCGA-BR-8682-01A-11D-2394-08	92	92	0	63	0	coding only	1	28836904	...	28	58	91	9.709780e-07	2.011312e-06	3.155679e-06	-5.500907e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-8683-01A-11D-2394-08	175	168	7	130	4.000000e-02	exome+100bp flanks	2	35888610	...	38	125	174	1.058832e-06	3.482999e-06	4.848335e-06	-5.314407e+00	...	4	32165001	...	1.243588e-07
TCGA-BR-8686-01A-11D-2394-08	144	142	2	101	1.388889e-02	coding only	1	28836904	...	41	97	144	1.421789e-06	3.363745e-06	4.993601e-06	-5.301586e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-8687-01A-11D-2394-08	218	213	5	162	2.293578e-02	coding only	1	28836904	...	51	161	218	1.768567e-06	5.583124e-06	7.559757e-06	-5.121492e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-8690-01A-11D-2394-08	178	173	5	129	2.808989e-02	coding only	1	28836904	...	44	125	178	1.525823e-06	4.334723e-06	6.172646e-06	-5.209529e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-A44T-01A-32D-A24D-08	25	25	0	17	0	coding only	1	28836904	...	8	14	24	2.774223e-07	4.854890e-07	8.322669e-07	-6.079737e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-A44U-01A-11D-A24D-08	125	120	5	88	4.000000e-02	exome+100bp flanks	2	35888610	...	32	86	125	8.916478e-07	2.396303e-06	3.482999e-06	-5.458047e+00	...	2	32165001	...	6.217939e-08
TCGA-BR-A452-01A-91D-A25D-08	128	127	1	92	7.812500e-03	coding only	1	28836904	...	35	83	127	1.213723e-06	2.878256e-06	4.404079e-06	-5.356145e+00	...	8	28780707	...	2.779640e-07
TCGA-BR-A453-01A-11D-A24D-08	86	85	1	64	1.162791e-02	coding only	1	28836904	...	21	62	86	7.282335e-07	2.150023e-06	2.982290e-06	-5.525450e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-A4CQ-01A-12D-A25D-08	200	198	2	158	1.000000e-02	coding only	1	28836904	...	40	153	200	1.387111e-06	5.305701e-06	6.935557e-06	-5.158919e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-A4CR-01A-11D-A24D-08	85	85	0	58	0	coding only	1	28836904	...	27	52	85	9.363002e-07	1.803245e-06	2.947612e-06	-5.530530e+00	...	6	28780707	...	2.084730e-07
TCGA-BR-A4CS-01A-11D-A24D-08	183	181	2	135	1.092896e-02	coding only	1	28836904	...	46	123	183	1.595178e-06	4.265368e-06	6.346035e-06	-5.197498e+00	...	12	28780707	...	4.169460e-07
TCGA-BR-A4IU-01A-22D-A25D-08	44	43	1	36	2.272727e-02	coding only	1	28836904	...	7	33	44	2.427445e-07	1.144367e-06	1.525823e-06	-5.816496e+00	...	3	28780707	...	1.042365e-07
TCGA-BR-A4IV-01A-31D-A25D-08	35	34	1	27	2.857143e-02	coding only	1	28836904	...	7	25	35	2.427445e-07	8.669447e-07	1.213723e-06	-5.915881e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-A4IY-01A-11D-A25D-08	163	158	5	122	3.067485e-02	exome+100bp flanks	2	35888610	...	36	117	163	1.003104e-06	3.260087e-06	4.541831e-06	-5.342769e+00	...	5	32165001	...	1.554485e-07
TCGA-BR-A4IZ-01A-32D-A25D-08	22	21	1	18	4.545455e-02	coding only	1	28836904	...	3	17	22	1.040334e-07	5.895224e-07	7.629113e-07	-6.117526e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-A4J1-01A-11D-A25D-08	83	81	2	61	2.409639e-02	coding only	1	28836904	...	20	57	83	6.935557e-07	1.976634e-06	2.878256e-06	-5.540871e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-A4J2-01A-21D-A25D-08	80	79	1	60	1.250000e-02	coding only	1	28836904	...	19	55	80	6.588779e-07	1.907278e-06	2.774223e-06	-5.556859e+00	...	5	28780707	...	1.737275e-07
TCGA-BR-A4J4-01A-12D-A25D-08	95	94	1	76	1.052632e-02	coding only	1	28836904	...	18	76	95	6.242002e-07	2.635512e-06	3.294390e-06	-5.482225e+00	...	0	28780707	...	0
TCGA-BR-A4J5-01A-21D-A25D-08	100	100	0	76	0	coding only	1	28836904	...	24	75	100	8.322669e-07	2.600834e-06	3.467779e-06	-5.459949e+00	...	1	28780707	...	3.474550e-08
TCGA-BR-A4J6-01A-11D-A25D-08	39	38	1	29	2.564103e-02	coding only	1	28836904	...	9	27	39	3.121001e-07	9.363002e-07	1.352434e-06	-5.868884e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-A4J7-01A-31D-A25D-08	71	68	3	51	4.225352e-02	coding only	1	28836904	...	17	51	71	5.895224e-07	1.768567e-06	2.462123e-06	-5.608690e+00	...	0	28780707	...	0
TCGA-BR-A4J8-01A-11D-A25D-08	111	111	0	74	0	coding only	1	28836904	...	37	72	111	1.283078e-06	2.496801e-06	3.849234e-06	-5.414626e+00	...	2	28780707	...	6.949100e-08
TCGA-BR-A4PD-01A-11D-A25D-08	171	168	3	134	1.754386e-02	coding only	1	28836904	...	34	127	170	1.179045e-06	4.404079e-06	5.895224e-06	-5.229500e+00	...	6	28780707	...	2.084730e-07
TCGA-BR-A4PE-01A-31D-A25D-08	263	255	8	197	3.041825e-02	exome+100bp flanks	2	35888610	...	58	184	262	1.616112e-06	5.126975e-06	7.300366e-06	-5.136655e+00	...	12	32165001	...	3.730763e-07
TCGA-BR-A4PF-01A-11D-A25D-08	126	126	0	104	0	coding only	1	28836904	...	22	97	125	7.629113e-07	3.363745e-06	4.334723e-06	-5.363039e+00	...	6	28780707	...	2.084730e-07
TCGA-BR-A4QI-01A-12D-A25D-08	147	145	2	108	1.360544e-02	coding only	1	28836904	...	37	104	147	1.283078e-06	3.606490e-06	5.097635e-06	-5.292631e+00	...	4	28780707	...	1.389820e-07
TCGA-BR-A4QL-01A-31D-A25D-08	2162	2134	28	1650	1.295097e-02	coding only	1	28836904	...	484	1216	2160	1.678405e-05	4.216819e-05	7.490402e-05	-4.125495e+00	...	431	28780707	...	1.497531e-05
TCGA-BR-A4QM-01A-12D-A25D-08	130	128	2	88	1.538462e-02	coding only	1	28836904	...	40	84	130	1.387111e-06	2.912934e-06	4.508112e-06	-5.346005e+00	...	4	28780707	...	1.389820e-07
TCGA-CD-5798-01A-11D-1600-08	108	106	2	80	1.851852e-02	coding only	1	28836904	...	26	77	108	9.016224e-07	2.670190e-06	3.745201e-06	-5.426525e+00	...	3	28780707	...	1.042365e-07
TCGA-CD-5799-01A-11D-1600-08	45	43	2	31	4.444444e-02	coding only	1	28836904	...	12	30	45	4.161334e-07	1.040334e-06	1.560500e-06	-5.806736e+00	...	1	28780707	...	3.474550e-08
TCGA-CD-5800-01A-11D-1600-08	197	193	4	148	2.030457e-02	coding only	1	28836904	...	45	140	196	1.560500e-06	4.854890e-06	6.796846e-06	-5.167693e+00	...	6	28780707	...	2.084730e-07
TCGA-CD-5801-01A-11D-1600-08	421	413	8	325	1.900238e-02	coding only	1	28836904	...	88	320	421	3.051645e-06	1.109689e-05	1.459935e-05	-4.835667e+00	...	5	28780707	...	1.737275e-07
TCGA-CD-5802-01A-11D-1600-08	60	60	0	47	0	coding only	1	28836904	...	13	40	60	4.508112e-07	1.387111e-06	2.080667e-06	-5.681797e+00	...	7	28780707	...	2.432185e-07
TCGA-CD-5803-01A-11D-1600-08	41	41	0	32	0	coding only	1	28836904	...	9	31	41	3.121001e-07	1.075011e-06	1.421789e-06	-5.847165e+00	...	1	28780707	...	3.474550e-08
TCGA-CD-5804-01A-12D-2053-08	90	88	2	72	2.222222e-02	coding only	1	28836904	...	16	66	90	5.548446e-07	2.288734e-06	3.121001e-06	-5.505706e+00	...	6	28780707	...	2.084730e-07
TCGA-CD-5813-01A-11D-1600-08	179	176	3	141	1.675978e-02	coding only	1	28836904	...	35	134	179	1.213723e-06	4.646823e-06	6.207324e-06	-5.207096e+00	...	7	28780707	...	2.432185e-07
TCGA-CD-8524-01A-11D-2340-08	210	210	0	163	0	coding only	1	28836904	...	47	158	210	1.629856e-06	5.479090e-06	7.282335e-06	-5.137729e+00	...	5	28780707	...	1.737275e-07
TCGA-CD-8525-01A-11D-2340-08	127	122	5	92	3.937008e-02	exome+100bp flanks	2	35888610	...	30	85	127	8.359198e-07	2.368439e-06	3.538727e-06	-5.451153e+00	...	7	32165001	...	2.176278e-07
TCGA-CD-8526-01A-11D-2340-08	78	77	1	65	1.282051e-02	coding only	1	28836904	...	12	58	78	4.161334e-07	2.011312e-06	2.704867e-06	-5.567854e+00	...	7	28780707	...	2.432185e-07
TCGA-CD-8527-01A-11D-2340-08	303	296	7	223	2.310231e-02	coding only	1	28836904	...	73	203	302	2.531478e-06	7.039591e-06	1.047269e-05	-4.979942e+00	...	19	28780707	...	6.601645e-07
TCGA-CD-8528-01A-11D-2340-08	153	151	2	117	1.307190e-02	coding only	1	28836904	...	34	115	153	1.179045e-06	3.987945e-06	5.305701e-06	-5.275257e+00	...	2	28780707	...	6.949100e-08
TCGA-CD-8529-01A-11D-2340-08	514	506	8	396	1.556420e-02	coding only	1	28836904	...	110	379	514	3.814557e-06	1.314288e-05	1.782438e-05	-4.748986e+00	...	16	28780707	...	5.559280e-07
TCGA-CD-8530-01A-11D-2340-08	130	129	1	94	7.692308e-03	coding only	1	28836904	...	35	93	130	1.213723e-06	3.225034e-06	4.508112e-06	-5.346005e+00	...	1	28780707	...	3.474550e-08
TCGA-CD-8531-01A-11D-2340-08	302	297	5	226	1.655629e-02	coding only	1	28836904	...	71	214	302	2.462123e-06	7.421046e-06	1.047269e-05	-4.979942e+00	...	12	28780707	...	4.169460e-07
TCGA-CD-8532-01A-11D-2340-08	68	66	2	49	2.941176e-02	coding only	1	28836904	...	17	45	68	5.895224e-07	1.560500e-06	2.358089e-06	-5.627440e+00	...	4	28780707	...	1.389820e-07
TCGA-CD-8533-01A-11D-2340-08	133	132	1	92	7.518797e-03	coding only	1	28836904	...	40	85	133	1.387111e-06	2.947612e-06	4.612146e-06	-5.336097e+00	...	7	28780707	...	2.432185e-07
TCGA-CD-8534-01A-11D-2340-08	90	89	1	69	1.111111e-02	coding only	1	28836904	...	20	66	90	6.935557e-07	2.288734e-06	3.121001e-06	-5.505706e+00	...	3	28780707	...	1.042365e-07
TCGA-CD-8535-01A-11D-2340-08	331	324	7	236	2.114804e-02	coding only	1	28836904	...	88	225	331	3.051645e-06	7.802502e-06	1.147835e-05	-4.940121e+00	...	11	28780707	...	3.822005e-07
TCGA-CD-8536-01A-11D-2340-08	1071	1059	12	846	1.120448e-02	coding only	1	28836904	...	213	634	1071	7.386369e-06	2.198572e-05	3.713991e-05	-4.430159e+00	...	212	28780707	...	7.366046e-06
TCGA-CD-A486-01A-11D-A24D-08	119	118	1	95	8.403361e-03	coding only	1	28836904	...	23	88	119	7.975891e-07	3.051645e-06	4.126657e-06	-5.384402e+00	...	7	28780707	...	2.432185e-07
TCGA-CD-A487-01A-21D-A24D-08	222	220	2	175	9.009009e-03	coding only	1	28836904	...	45	167	222	1.560500e-06	5.791190e-06	7.698469e-06	-5.113596e+00	...	8	28780707	...	2.779640e-07
TCGA-CD-A489-01A-11D-A24D-08	92	88	4	68	4.347826e-02	coding only	1	28836904	...	20	65	92	6.935557e-07	2.254056e-06	3.190356e-06	-5.496161e+00	...	3	28780707	...	1.042365e-07
TCGA-CD-A48A-01A-12D-A24D-08	273	269	4	214	1.465201e-02	coding only	1	28836904	...	55	209	273	1.907278e-06	7.247657e-06	9.467036e-06	-5.023786e+00	...	5	28780707	...	1.737275e-07
TCGA-CD-A48C-01A-11D-A24D-08	246	241	5	181	2.032520e-02	coding only	1	28836904	...	60	177	245	2.080667e-06	6.137968e-06	8.496058e-06	-5.070783e+00	...	3	28780707	...	1.042365e-07
TCGA-CD-A4MG-01A-11D-A25D-08	3286	3231	55	2525	1.673767e-02	coding only	1	28836904	...	705	1990	3283	2.444784e-05	6.900880e-05	1.138472e-04	-3.943678e+00	...	533	28780707	...	1.851935e-05
TCGA-CD-A4MH-01A-11D-A25D-08	106	105	1	72	9.433962e-03	coding only	1	28836904	...	33	66	106	1.144367e-06	2.288734e-06	3.675845e-06	-5.434643e+00	...	6	28780707	...	2.084730e-07
TCGA-CD-A4MI-01A-21D-A25D-08	1276	1256	20	977	1.567398e-02	coding only	1	28836904	...	279	756	1276	9.675102e-06	2.621641e-05	4.424886e-05	-4.354098e+00	...	221	28780707	...	7.678755e-06
TCGA-CD-A4MJ-01A-11D-A25D-08	808	800	8	641	9.900990e-03	coding only	1	28836904	...	159	459	807	5.513768e-06	1.591710e-05	2.798497e-05	-4.553075e+00	...	181	28780707	...	6.288935e-06
TCGA-CG-4300-01A-01D-1158-08	131	128	3	99	2.290076e-02	coding only	1	28836904	...	29	94	131	1.005656e-06	3.259712e-06	4.542790e-06	-5.342677e+00	...	5	28780707	...	1.737275e-07
TCGA-CG-4301-01A-01D-1158-08	63	62	1	46	1.587302e-02	coding only	1	28836904	...	16	45	63	5.548446e-07	1.560500e-06	2.184701e-06	-5.660608e+00	...	1	28780707	...	3.474550e-08
TCGA-CG-4304-01A-01D-1158-08	94	93	1	67	1.063830e-02	coding only	1	28836904	...	26	59	94	9.016224e-07	2.045989e-06	3.259712e-06	-5.486821e+00	...	8	28780707	...	2.779640e-07
TCGA-CG-4305-01A-01D-1158-08	1472	1444	28	1105	1.902174e-02	coding only	1	28836904	...	339	835	1472	1.175577e-05	2.895595e-05	5.104570e-05	-4.292041e+00	...	270	28780707	...	9.381284e-06
TCGA-CG-4306-01A-01D-1158-08	1337	1314	23	1030	1.720269e-02	coding only	1	28836904	...	284	752	1336	9.848491e-06	2.607770e-05	4.632952e-05	-4.334142e+00	...	277	28780707	...	9.624503e-06
TCGA-CG-4436-01A-01D-1158-08	207	206	1	159	4.830918e-03	coding only	1	28836904	...	47	155	207	1.629856e-06	5.375057e-06	7.178302e-06	-5.143978e+00	...	4	28780707	...	1.389820e-07
TCGA-CG-4437-01A-01D-1800-08	571	560	11	449	1.926445e-02	coding only	1	28836904	...	111	427	571	3.849234e-06	1.480741e-05	1.980102e-05	-4.703313e+00	...	22	28780707	...	7.644010e-07
TCGA-CG-4438-01A-01D-1158-08	151	149	2	119	1.324503e-02	coding only	1	28836904	...	30	115	151	1.040334e-06	3.987945e-06	5.236346e-06	-5.280972e+00	...	4	28780707	...	1.389820e-07
TCGA-CG-4440-01A-01D-1158-08	143	142	1	119	6.993007e-03	coding only	1	28836904	...	23	113	143	7.975891e-07	3.918590e-06	4.958923e-06	-5.304613e+00	...	6	28780707	...	2.084730e-07
TCGA-CG-4441-01A-01D-1800-08	123	122	1	91	8.130081e-03	coding only	1	28836904	...	31	86	123	1.075011e-06	2.982290e-06	4.265368e-06	-5.370044e+00	...	5	28780707	...	1.737275e-07
TCGA-CG-4442-01A-01D-1158-08	1640	1613	27	1254	1.646341e-02	coding only	1	28836904	...	357	924	1638	1.237997e-05	3.204227e-05	5.680221e-05	-4.245635e+00	...	330	28780707	...	1.146601e-05
TCGA-CG-4443-01A-01D-1158-08	108	107	1	78	9.259259e-03	coding only	1	28836904	...	29	72	108	1.005656e-06	2.496801e-06	3.745201e-06	-5.426525e+00	...	6	28780707	...	2.084730e-07
TCGA-CG-4444-01A-01D-1158-08	190	189	1	138	5.263158e-03	coding only	1	28836904	...	51	136	190	1.768567e-06	4.716179e-06	6.588779e-06	-5.181195e+00	...	2	28780707	...	6.949100e-08
TCGA-CG-4449-01A-01D-1158-08	114	111	3	91	2.631579e-02	coding only	1	28836904	...	20	81	114	6.935557e-07	2.808901e-06	3.953268e-06	-5.403044e+00	...	10	28780707	...	3.474550e-07
TCGA-CG-4455-01A-01D-1158-08	47	46	1	31	2.127660e-02	coding only	1	28836904	...	15	28	47	5.201668e-07	9.709780e-07	1.629856e-06	-5.787851e+00	...	3	28780707	...	1.042365e-07
TCGA-CG-4460-01A-01D-1158-08	2171	2146	25	1631	1.151543e-02	coding only	1	28836904	...	513	1371	2168	1.778970e-05	4.754325e-05	7.518144e-05	-4.123889e+00	...	259	28780707	...	8.999084e-06
TCGA-CG-4462-01A-01D-1158-08	82	82	0	57	0	coding only	1	28836904	...	25	54	82	8.669447e-07	1.872600e-06	2.843578e-06	-5.546135e+00	...	3	28780707	...	1.042365e-07
TCGA-CG-4465-01A-01D-1158-08	724	709	15	555	2.071823e-02	coding only	1	28836904	...	154	422	724	5.340379e-06	1.463403e-05	2.510672e-05	-4.600210e+00	...	133	28780707	...	4.621151e-06
TCGA-CG-4466-01A-01D-1158-08	231	221	10	167	4.329004e-02	exome+100bp flanks	2	35888610	...	54	158	231	1.504656e-06	4.402511e-06	6.436583e-06	-5.191345e+00	...	9	32165001	...	2.798072e-07
TCGA-CG-4469-01A-01D-1158-08	339	335	4	266	1.179941e-02	coding only	1	28836904	...	69	257	339	2.392767e-06	8.912191e-06	1.175577e-05	-4.929749e+00	...	9	28780707	...	3.127095e-07
TCGA-CG-4474-01A-02D-1158-08	104	101	3	75	2.884615e-02	coding only	1	28836904	...	26	67	104	9.016224e-07	2.323412e-06	3.606490e-06	-5.442915e+00	...	8	28780707	...	2.779640e-07
TCGA-CG-4475-01A-01D-1158-08	63	63	0	50	0	coding only	1	28836904	...	13	45	63	4.508112e-07	1.560500e-06	2.184701e-06	-5.660608e+00	...	5	28780707	...	1.737275e-07
TCGA-CG-4476-01A-01D-1158-08	136	134	2	113	1.470588e-02	coding only	1	28836904	...	21	109	136	7.282335e-07	3.779879e-06	4.716179e-06	-5.326410e+00	...	4	28780707	...	1.389820e-07
TCGA-CG-4477-01A-01D-1158-08	132	130	2	115	1.515152e-02	coding only	1	28836904	...	15	40	132	5.201668e-07	1.387111e-06	4.577468e-06	-5.339375e+00	...	75	28780707	...	2.605912e-06
TCGA-CG-5716-01A-21D-1800-08	15	15	0	13	0	coding only	1	28836904	...	2	13	15	6.935557e-08	4.508112e-07	5.201668e-07	-6.283857e+00	...	0	28780707	...	0
TCGA-CG-5717-01A-11D-1600-08	108	106	2	80	1.851852e-02	coding only	1	28836904	...	26	75	108	9.016224e-07	2.600834e-06	3.745201e-06	-5.426525e+00	...	5	28780707	...	1.737275e-07
TCGA-CG-5718-01A-11D-1600-08	103	100	3	81	2.912621e-02	coding only	1	28836904	...	19	78	103	6.588779e-07	2.704867e-06	3.571812e-06	-5.447111e+00	...	3	28780707	...	1.042365e-07
TCGA-CG-5719-01A-11D-1600-08	76	75	1	56	1.315789e-02	coding only	1	28836904	...	19	54	76	6.588779e-07	1.872600e-06	2.635512e-06	-5.579135e+00	...	2	28780707	...	6.949100e-08
TCGA-CG-5720-01A-11D-1600-08	84	84	0	61	0	coding only	1	28836904	...	23	59	84	7.975891e-07	2.045989e-06	2.912934e-06	-5.535669e+00	...	2	28780707	...	6.949100e-08
TCGA-CG-5721-01A-11D-1600-08	4841	4773	68	3678	1.404668e-02	coding only	1	28836904	...	1095	3156	4840	3.797218e-05	1.094431e-04	1.678405e-04	-3.775103e+00	...	521	28780707	...	1.810240e-05
TCGA-CG-5722-01A-21D-1600-08	99	98	1	73	1.010101e-02	coding only	1	28836904	...	25	67	98	8.669447e-07	2.323412e-06	3.398423e-06	-5.468723e+00	...	5	28780707	...	1.737275e-07
TCGA-CG-5723-01A-11D-1600-08	2027	1983	44	1558	2.170696e-02	coding only	1	28836904	...	425	1165	2027	1.473806e-05	4.039962e-05	7.029187e-05	-4.153095e+00	...	393	28780707	...	1.365498e-05
TCGA-CG-5724-01A-11D-1600-08	118	116	2	90	1.694915e-02	coding only	1	28836904	...	26	85	118	9.016224e-07	2.947612e-06	4.091979e-06	-5.388067e+00	...	5	28780707	...	1.737275e-07
TCGA-CG-5725-01A-11D-1600-08	104	103	1	96	9.615385e-03	coding only	1	28836904	...	7	33	104	2.427445e-07	1.144367e-06	3.606490e-06	-5.442915e+00	...	63	28780707	...	2.188966e-06
TCGA-CG-5726-01A-11D-1600-08	1469	1435	34	1114	2.314500e-02	coding only	1	28836904	...	321	811	1469	1.113157e-05	2.812368e-05	5.094167e-05	-4.292927e+00	...	302	28780707	...	1.049314e-05
TCGA-CG-5727-01A-11D-1600-08	176	175	1	125	5.681818e-03	coding only	1	28836904	...	50	123	176	1.733889e-06	4.265368e-06	6.103290e-06	-5.214436e+00	...	2	28780707	...	6.949100e-08
TCGA-CG-5728-01A-11D-1600-08	1719	1694	25	1310	1.454334e-02	coding only	1	28836904	...	384	941	1718	1.331627e-05	3.263180e-05	5.957644e-05	-4.224925e+00	...	368	28780707	...	1.278634e-05
TCGA-CG-5730-01A-11D-1600-08	179	177	2	123	1.117318e-02	coding only	1	28836904	...	54	116	179	1.872600e-06	4.022623e-06	6.207324e-06	-5.207096e+00	...	7	28780707	...	2.432185e-07
TCGA-CG-5732-01A-11D-1600-08	66	65	1	46	1.515152e-02	coding only	1	28836904	...	19	43	66	6.588779e-07	1.491145e-06	2.288734e-06	-5.640405e+00	...	3	28780707	...	1.042365e-07
TCGA-CG-5733-01A-11D-1600-08	1254	1231	23	941	1.834131e-02	coding only	1	28836904	...	290	707	1253	1.005656e-05	2.451720e-05	4.345127e-05	-4.361998e+00	...	234	28780707	...	8.130447e-06
TCGA-CG-5734-01A-11D-1600-08	95	92	3	73	3.157895e-02	coding only	1	28836904	...	19	71	95	6.588779e-07	2.462123e-06	3.294390e-06	-5.482225e+00	...	2	28780707	...	6.949100e-08
TCGA-D7-5577-01A-01D-1600-08	135	132	3	107	2.222222e-02	coding only	1	28836904	...	25	102	135	8.669447e-07	3.537134e-06	4.681501e-06	-5.329615e+00	...	5	28780707	...	1.737275e-07
TCGA-D7-5578-01A-01D-1600-08	249	247	2	177	8.032129e-03	coding only	1	28836904	...	70	174	249	2.427445e-06	6.033935e-06	8.634769e-06	-5.063749e+00	...	3	28780707	...	1.042365e-07
TCGA-D7-5579-01A-01D-1600-08	171	169	2	137	1.169591e-02	coding only	1	28836904	...	32	133	171	1.109689e-06	4.612146e-06	5.929901e-06	-5.226953e+00	...	4	28780707	...	1.389820e-07
TCGA-D7-6518-01A-11D-1800-08	94	94	0	67	0	coding only	1	28836904	...	27	62	94	9.363002e-07	2.150023e-06	3.259712e-06	-5.486821e+00	...	5	28780707	...	1.737275e-07
TCGA-D7-6519-01A-11D-1800-08	64	63	1	50	1.562500e-02	coding only	1	28836904	...	13	46	64	4.508112e-07	1.595178e-06	2.219378e-06	-5.653769e+00	...	4	28780707	...	1.389820e-07
TCGA-D7-6520-01A-11D-1800-08	73	73	0	54	0	coding only	1	28836904	...	19	52	73	6.588779e-07	1.803245e-06	2.531478e-06	-5.596626e+00	...	2	28780707	...	6.949100e-08
TCGA-D7-6521-01A-11D-1800-08	87	86	1	74	1.149425e-02	coding only	1	28836904	...	12	72	87	4.161334e-07	2.496801e-06	3.016967e-06	-5.520429e+00	...	2	28780707	...	6.949100e-08
TCGA-D7-6522-01A-11D-1800-08	46	46	0	35	0	coding only	1	28836904	...	11	35	46	3.814557e-07	1.213723e-06	1.595178e-06	-5.797191e+00	...	0	28780707	...	0
TCGA-D7-6524-01A-11D-1800-08	125	119	6	89	4.800000e-02	exome+100bp flanks	2	35888610	...	30	87	125	8.359198e-07	2.424167e-06	3.482999e-06	-5.458047e+00	...	2	32165001	...	6.217939e-08
TCGA-D7-6525-01A-11D-1800-08	190	187	3	134	1.578947e-02	coding only	1	28836904	...	53	129	190	1.837923e-06	4.473434e-06	6.588779e-06	-5.181195e+00	...	5	28780707	...	1.737275e-07
TCGA-D7-6526-01A-11D-1800-08	244	240	4	183	1.639344e-02	coding only	1	28836904	...	57	172	244	1.976634e-06	5.964579e-06	8.461380e-06	-5.072559e+00	...	10	28780707	...	3.474550e-07
TCGA-D7-6527-01A-11D-1800-08	240	233	7	185	2.916667e-02	coding only	1	28836904	...	48	178	240	1.664534e-06	6.172646e-06	8.322669e-06	-5.079737e+00	...	7	28780707	...	2.432185e-07
TCGA-D7-6528-01A-11D-1800-08	362	357	5	282	1.381215e-02	coding only	1	28836904	...	75	269	362	2.600834e-06	9.328325e-06	1.255336e-05	-4.901240e+00	...	13	28780707	...	4.516915e-07
TCGA-D7-6815-01A-11D-1882-08	162	156	6	118	3.703704e-02	exome+100bp flanks	2	35888610	...	38	105	162	1.058832e-06	2.925719e-06	4.513967e-06	-5.345442e+00	...	13	32165001	...	4.041660e-07
TCGA-D7-6817-01A-11D-1882-08	93	91	2	70	2.150538e-02	coding only	1	28836904	...	21	69	93	7.282335e-07	2.392767e-06	3.225034e-06	-5.491466e+00	...	1	28780707	...	3.474550e-08
TCGA-D7-6818-01A-11D-1882-08	174	173	1	143	5.747126e-03	coding only	1	28836904	...	30	138	173	1.040334e-06	4.785535e-06	5.999257e-06	-5.221903e+00	...	4	28780707	...	1.389820e-07
TCGA-D7-6820-01A-11D-1882-08	104	102	2	73	1.923077e-02	coding only	1	28836904	...	29	71	104	1.005656e-06	2.462123e-06	3.606490e-06	-5.442915e+00	...	2	28780707	...	6.949100e-08
TCGA-D7-6822-01A-11D-1882-08	264	261	3	217	1.136364e-02	coding only	1	28836904	...	44	209	264	1.525823e-06	7.247657e-06	9.154936e-06	-5.038345e+00	...	8	28780707	...	2.779640e-07
TCGA-D7-8570-01A-11D-2340-08	143	142	1	104	6.993007e-03	coding only	1	28836904	...	38	100	143	1.317756e-06	3.467779e-06	4.958923e-06	-5.304613e+00	...	4	28780707	...	1.389820e-07
TCGA-D7-8572-01A-11D-2340-08	231	228	3	176	1.298701e-02	coding only	1	28836904	...	52	171	231	1.803245e-06	5.929901e-06	8.010569e-06	-5.096337e+00	...	5	28780707	...	1.737275e-07
TCGA-D7-8573-01A-11D-2340-08	119	118	1	89	8.403361e-03	coding only	1	28836904	...	29	85	119	1.005656e-06	2.947612e-06	4.126657e-06	-5.384402e+00	...	4	28780707	...	1.389820e-07
TCGA-D7-8574-01A-13D-2340-08	65	63	2	50	3.076923e-02	coding only	1	28836904	...	13	49	65	4.508112e-07	1.699212e-06	2.254056e-06	-5.647035e+00	...	1	28780707	...	3.474550e-08
TCGA-D7-8575-01A-11D-2340-08	66	66	0	52	0	coding only	1	28836904	...	14	44	66	4.854890e-07	1.525823e-06	2.288734e-06	-5.640405e+00	...	8	28780707	...	2.779640e-07
TCGA-D7-8576-01A-11D-2340-08	87	85	2	67	2.298851e-02	coding only	1	28836904	...	18	63	87	6.242002e-07	2.184701e-06	3.016967e-06	-5.520429e+00	...	4	28780707	...	1.389820e-07
TCGA-D7-8578-01A-21D-2340-08	66	66	0	52	0	coding only	1	28836904	...	14	48	66	4.854890e-07	1.664534e-06	2.288734e-06	-5.640405e+00	...	4	28780707	...	1.389820e-07
TCGA-D7-8579-01A-11D-2340-08	140	136	4	102	2.857143e-02	coding only	1	28836904	...	34	102	140	1.179045e-06	3.537134e-06	4.854890e-06	-5.313821e+00	...	0	28780707	...	0
TCGA-D7-A4YT-01A-11D-A25D-08	331	328	3	243	9.063444e-03	coding only	1	28836904	...	84	224	329	2.912934e-06	7.767824e-06	1.140899e-05	-4.942753e+00	...	18	28780707	...	6.254190e-07
TCGA-D7-A4YU-01A-21D-A25D-08	221	218	3	180	1.357466e-02	coding only	1	28836904	...	38	173	221	1.317756e-06	5.999257e-06	7.663791e-06	-5.115556e+00	...	7	28780707	...	2.432185e-07
TCGA-D7-A4YV-01A-11D-A25D-08	1101	1086	15	841	1.362398e-02	coding only	1	28836904	...	245	641	1098	8.496058e-06	2.222846e-05	3.807621e-05	-4.419346e+00	...	197	28780707	...	6.844863e-06
TCGA-D7-A4YX-01A-11D-A25D-08	93	91	2	69	2.150538e-02	coding only	1	28836904	...	22	66	93	7.629113e-07	2.288734e-06	3.225034e-06	-5.491466e+00	...	3	28780707	...	1.042365e-07
TCGA-D7-A4YY-01A-11D-A25D-08	566	560	6	409	1.060071e-02	coding only	1	28836904	...	151	309	566	5.236346e-06	1.071544e-05	1.962763e-05	-4.707132e+00	...	100	28780707	...	3.474550e-06
TCGA-D7-A4Z0-01A-22D-A25D-08	336	330	6	271	1.785714e-02	coding only	1	28836904	...	59	265	336	2.045989e-06	9.189613e-06	1.165174e-05	-4.933609e+00	...	6	28780707	...	2.084730e-07
TCGA-D7-A6ET-01A-32D-A32N-08	42	41	1	29	2.380952e-02	coding only	1	28836904	...	12	24	42	4.161334e-07	8.322669e-07	1.456467e-06	-5.836699e+00	...	5	28780707	...	1.737275e-07
TCGA-D7-A6EV-01A-11D-A31L-08	211	204	7	157	3.317536e-02	exome+100bp flanks	2	35888610	...	47	147	211	1.309608e-06	4.096007e-06	5.879303e-06	-5.230674e+00	...	10	32165001	...	3.108969e-07
TCGA-D7-A6EX-01A-11D-A31L-08	145	143	2	112	1.379310e-02	coding only	1	28836904	...	31	107	145	1.075011e-06	3.710523e-06	5.028279e-06	-5.298581e+00	...	5	28780707	...	1.737275e-07
TCGA-D7-A6EY-01A-21D-A31L-08	1755	1717	38	1355	2.165242e-02	coding only	1	28836904	...	362	1059	1755	1.255336e-05	3.672378e-05	6.085952e-05	-4.215672e+00	...	296	28780707	...	1.028467e-05
TCGA-D7-A6EZ-01A-11D-A31L-08	303	299	4	248	1.320132e-02	coding only	1	28836904	...	51	228	302	1.768567e-06	7.906535e-06	1.047269e-05	-4.979942e+00	...	19	28780707	...	6.601645e-07
TCGA-D7-A6F0-01A-11D-A31L-08	158	154	4	112	2.531646e-02	coding only	1	28836904	...	42	102	157	1.456467e-06	3.537134e-06	5.444412e-06	-5.264049e+00	...	9	28780707	...	3.127095e-07
TCGA-D7-A6F2-01A-12D-A31L-08	86	86	0	71	0	coding only	1	28836904	...	15	69	86	5.201668e-07	2.392767e-06	2.982290e-06	-5.525450e+00	...	2	28780707	...	6.949100e-08
TCGA-D7-A747-01A-22D-A33T-08	118	115	3	97	2.542373e-02	coding only	1	28836904	...	18	94	118	6.242002e-07	3.259712e-06	4.091979e-06	-5.388067e+00	...	3	28780707	...	1.042365e-07
TCGA-D7-A748-01A-12D-A32N-08	54	53	1	40	1.851852e-02	coding only	1	28836904	...	13	36	54	4.508112e-07	1.248400e-06	1.872600e-06	-5.727555e+00	...	4	28780707	...	1.389820e-07
TCGA-D7-A74A-01A-11D-A32N-08	170	165	5	126	2.941176e-02	coding only	1	28836904	...	39	117	170	1.352434e-06	4.057301e-06	5.895224e-06	-5.229500e+00	...	9	28780707	...	3.127095e-07
TCGA-D7-A74B-01A-12D-A33T-08	40	40	0	28	0	coding only	1	28836904	...	12	26	40	4.161334e-07	9.016224e-07	1.387111e-06	-5.857889e+00	...	2	28780707	...	6.949100e-08
TCGA-EQ-5647-01A-01D-1600-08	96	93	3	69	3.125000e-02	coding only	1	28836904	...	24	69	96	8.322669e-07	2.392767e-06	3.329068e-06	-5.477677e+00	...	0	28780707	...	0
TCGA-EQ-8122-01A-11D-2340-08	218	210	8	158	3.669725e-02	exome+100bp flanks	2	35888610	...	52	151	218	1.448928e-06	4.207463e-06	6.074351e-06	-5.216500e+00	...	7	32165001	...	2.176278e-07
TCGA-EQ-A4SO-01A-11D-A25D-08	209	208	1	170	4.784689e-03	coding only	1	28836904	...	38	146	209	1.317756e-06	5.062957e-06	7.247657e-06	-5.139802e+00	...	24	28780707	...	8.338920e-07
TCGA-F1-6177-01A-11D-1800-08	1592	1566	26	1202	1.633166e-02	coding only	1	28836904	...	363	903	1591	1.258804e-05	3.131404e-05	5.517236e-05	-4.258278e+00	...	299	28780707	...	1.038890e-05
TCGA-F1-6874-01A-11D-1882-08	1088	1070	18	832	1.654412e-02	coding only	1	28836904	...	238	614	1087	8.253313e-06	2.129216e-05	3.769475e-05	-4.423719e+00	...	217	28780707	...	7.539773e-06
TCGA-F1-6875-01A-11D-2053-08	99	97	2	78	2.020202e-02	coding only	1	28836904	...	19	77	99	6.588779e-07	2.670190e-06	3.433101e-06	-5.464313e+00	...	1	28780707	...	3.474550e-08
TCGA-F1-A448-01A-11D-A24D-08	780	765	15	580	1.923077e-02	coding only	1	28836904	...	185	460	780	6.415391e-06	1.595178e-05	2.704867e-05	-4.567854e+00	...	120	28780707	...	4.169460e-06
TCGA-F1-A72C-01A-21D-A33T-08	67	67	0	51	0	coding only	1	28836904	...	16	45	67	5.548446e-07	1.560500e-06	2.323412e-06	-5.633874e+00	...	6	28780707	...	2.084730e-07
TCGA-FP-7735-01A-11D-2053-08	78	78	0	58	0	coding only	1	28836904	...	20	55	78	6.935557e-07	1.907278e-06	2.704867e-06	-5.567854e+00	...	3	28780707	...	1.042365e-07
TCGA-FP-7829-01A-11D-2053-08	287	283	4	213	1.393728e-02	coding only	1	28836904	...	70	202	287	2.427445e-06	7.004913e-06	9.952525e-06	-5.002067e+00	...	10	28780707	...	3.474550e-07
TCGA-FP-7916-01A-11D-2201-08	126	126	0	94	0	coding only	1	28836904	...	32	90	126	1.109689e-06	3.121001e-06	4.369401e-06	-5.359578e+00	...	4	28780707	...	1.389820e-07
TCGA-FP-7998-01A-11D-2201-08	78	75	3	56	3.846154e-02	coding only	1	28836904	...	19	54	77	6.588779e-07	1.872600e-06	2.670190e-06	-5.573458e+00	...	1	28780707	...	3.474550e-08
TCGA-FP-8099-01A-11D-2340-08	178	178	0	128	0	coding only	1	28836904	...	50	124	178	1.733889e-06	4.300046e-06	6.172646e-06	-5.209529e+00	...	4	28780707	...	1.389820e-07
TCGA-FP-8209-01A-11D-2340-08	20	20	0	17	0	coding only	1	28836904	...	3	17	20	1.040334e-07	5.895224e-07	6.935557e-07	-6.158919e+00	...	0	28780707	...	0
TCGA-FP-8210-01A-11D-2340-08	10	10	0	8	0	coding only	1	28836904	...	2	8	10	6.935557e-08	2.774223e-07	3.467779e-07	-6.459949e+00	...	0	28780707	...	0
TCGA-FP-8211-01A-11D-2340-08	148	144	4	122	2.702703e-02	coding only	1	28836904	...	22	111	148	7.629113e-07	3.849234e-06	5.132312e-06	-5.289687e+00	...	11	28780707	...	3.822005e-07
TCGA-FP-8631-01A-11D-2394-08	123	121	2	92	1.626016e-02	coding only	1	28836904	...	29	83	123	1.005656e-06	2.878256e-06	4.265368e-06	-5.370044e+00	...	9	28780707	...	3.127095e-07
TCGA-FP-A4BE-01A-12D-A24D-08	1825	1791	34	1386	1.863014e-02	coding only	1	28836904	...	405	1092	1822	1.404450e-05	3.786814e-05	6.318293e-05	-4.199400e+00	...	291	28780707	...	1.011094e-05
TCGA-FP-A4BF-01A-12D-A24D-08	130	129	1	100	7.692308e-03	coding only	1	28836904	...	29	93	130	1.005656e-06	3.225034e-06	4.508112e-06	-5.346005e+00	...	7	28780707	...	2.432185e-07
TCGA-FP-A8CX-01A-11D-A364-08	89	88	1	69	1.123596e-02	coding only	1	28836904	...	19	63	89	6.588779e-07	2.184701e-06	3.086323e-06	-5.510559e+00	...	6	28780707	...	2.084730e-07
TCGA-FP-A9TM-01A-11D-A397-08	172	169	3	131	1.744186e-02	coding only	1	28836904	...	38	123	172	1.317756e-06	4.265368e-06	5.964579e-06	-5.224420e+00	...	8	28780707	...	2.779640e-07
TCGA-HF-7131-01A-11D-2053-08	104	102	2	76	1.923077e-02	coding only	1	28836904	...	26	75	104	9.016224e-07	2.600834e-06	3.606490e-06	-5.442915e+00	...	1	28780707	...	3.474550e-08
TCGA-HF-7132-01A-11D-2053-08	1571	1545	26	1196	1.654997e-02	coding only	1	28836904	...	349	909	1571	1.210255e-05	3.152211e-05	5.447880e-05	-4.263772e+00	...	287	28780707	...	9.971958e-06
TCGA-HF-7133-01A-11D-2053-08	101	101	0	79	0	coding only	1	28836904	...	22	73	101	7.629113e-07	2.531478e-06	3.502456e-06	-5.455627e+00	...	6	28780707	...	2.084730e-07
TCGA-HF-7134-01A-11D-2053-08	309	305	4	237	1.294498e-02	coding only	1	28836904	...	68	233	308	2.358089e-06	8.079924e-06	1.068076e-05	-4.971398e+00	...	3	28780707	...	1.042365e-07
TCGA-HF-7136-01A-11D-2053-08	113	112	1	89	8.849558e-03	coding only	1	28836904	...	23	80	113	7.975891e-07	2.774223e-06	3.918590e-06	-5.406870e+00	...	9	28780707	...	3.127095e-07
TCGA-HF-A5NB-01A-11D-A31L-08	1695	1662	33	1302	1.946903e-02	coding only	1	28836904	...	360	953	1695	1.248400e-05	3.304793e-05	5.877885e-05	-4.230779e+00	...	348	28780707	...	1.209143e-05
TCGA-HJ-7597-01A-21D-2201-08	986	972	14	722	1.419878e-02	coding only	1	28836904	...	250	564	985	8.669447e-06	1.955827e-05	3.415762e-05	-4.466512e+00	...	157	28780707	...	5.455043e-06
TCGA-HU-8238-01A-11D-2340-08	181	179	2	141	1.104972e-02	coding only	1	28836904	...	38	135	181	1.317756e-06	4.681501e-06	6.276679e-06	-5.202270e+00	...	6	28780707	...	2.084730e-07
TCGA-HU-8243-01A-11D-2340-08	177	175	2	129	1.129944e-02	coding only	1	28836904	...	46	119	177	1.595178e-06	4.126657e-06	6.137968e-06	-5.211975e+00	...	10	28780707	...	3.474550e-07
TCGA-HU-8244-01A-11D-2340-08	138	137	1	95	7.246377e-03	coding only	1	28836904	...	42	93	138	1.456467e-06	3.225034e-06	4.785535e-06	-5.320070e+00	...	2	28780707	...	6.949100e-08
TCGA-HU-8249-01A-11D-2340-08	171	169	2	129	1.169591e-02	coding only	1	28836904	...	40	124	171	1.387111e-06	4.300046e-06	5.929901e-06	-5.226953e+00	...	5	28780707	...	1.737275e-07
TCGA-HU-8602-01A-11D-2394-08	2020	1996	24	1540	1.188119e-02	coding only	1	28836904	...	455	1136	2018	1.577839e-05	3.939397e-05	6.997977e-05	-4.155027e+00	...	403	28780707	...	1.400244e-05
TCGA-HU-8604-01A-11D-2394-08	257	254	3	188	1.167315e-02	coding only	1	28836904	...	66	180	257	2.288734e-06	6.242002e-06	8.912191e-06	-5.050016e+00	...	8	28780707	...	2.779640e-07
TCGA-HU-8608-01A-11D-2394-08	107	107	0	86	0	coding only	1	28836904	...	21	79	107	7.282335e-07	2.739545e-06	3.710523e-06	-5.430565e+00	...	7	28780707	...	2.432185e-07
TCGA-HU-8610-01A-22D-2394-08	95	94	1	71	1.052632e-02	coding only	1	28836904	...	23	70	95	7.975891e-07	2.427445e-06	3.294390e-06	-5.482225e+00	...	1	28780707	...	3.474550e-08
TCGA-HU-A4G2-01A-11D-A25D-08	75	75	0	51	0	coding only	1	28836904	...	24	47	75	8.322669e-07	1.629856e-06	2.600834e-06	-5.584887e+00	...	4	28780707	...	1.389820e-07
TCGA-HU-A4G3-01A-11D-A24D-08	133	132	1	96	7.518797e-03	coding only	1	28836904	...	36	88	133	1.248400e-06	3.051645e-06	4.612146e-06	-5.336097e+00	...	8	28780707	...	2.779640e-07
TCGA-HU-A4G6-01A-11D-A24D-08	105	100	5	77	4.761905e-02	exome+100bp flanks	2	35888610	...	23	71	105	6.408719e-07	1.978344e-06	2.925719e-06	-5.533767e+00	...	6	32165001	...	1.865382e-07
TCGA-HU-A4G8-01A-11D-A25D-08	1866	1848	18	1425	9.646302e-03	coding only	1	28836904	...	423	1063	1865	1.466870e-05	3.686249e-05	6.467407e-05	-4.189270e+00	...	360	28780707	...	1.250838e-05
TCGA-HU-A4G9-01A-11D-A24D-08	959	941	18	719	1.876955e-02	coding only	1	28836904	...	222	529	959	7.698469e-06	1.834455e-05	3.325600e-05	-4.478130e+00	...	190	28780707	...	6.601645e-06
TCGA-HU-A4GC-01A-12D-A25D-08	175	172	3	125	1.714286e-02	coding only	1	28836904	...	47	120	175	1.629856e-06	4.161334e-06	6.068613e-06	-5.216911e+00	...	5	28780707	...	1.737275e-07
TCGA-HU-A4GD-01A-11D-A25D-08	114	112	2	82	1.754386e-02	coding only	1	28836904	...	29	78	113	1.005656e-06	2.704867e-06	3.918590e-06	-5.406870e+00	...	4	28780707	...	1.389820e-07
TCGA-HU-A4GF-01A-11D-A24D-08	180	178	2	136	1.111111e-02	coding only	1	28836904	...	42	124	180	1.456467e-06	4.300046e-06	6.242002e-06	-5.204676e+00	...	12	28780707	...	4.169460e-07
TCGA-HU-A4GH-01A-11D-A24D-08	849	834	15	695	1.766784e-02	coding only	1	28836904	...	139	684	849	4.820212e-06	2.371961e-05	2.944144e-05	-4.531041e+00	...	10	28780707	...	3.474550e-07
TCGA-HU-A4GJ-01A-11D-A25D-08	4	4	0	3	0	coding only	1	28836904	...	1	2	4	3.467779e-08	6.935557e-08	1.387111e-07	-6.857889e+00	...	1	28780707	...	3.474550e-08
TCGA-HU-A4GN-01A-11D-A25D-08	1505	1477	28	1141	1.860465e-02	coding only	1	28836904	...	336	876	1505	1.165174e-05	3.037774e-05	5.219007e-05	-4.282412e+00	...	265	28780707	...	9.207557e-06
TCGA-HU-A4GP-01A-11D-A25D-08	265	262	3	195	1.132075e-02	coding only	1	28836904	...	67	184	265	2.323412e-06	6.380713e-06	9.189613e-06	-5.036703e+00	...	11	28780707	...	3.822005e-07
TCGA-HU-A4GQ-01A-11D-A25D-08	2205	2154	51	1656	2.312925e-02	coding only	1	28836904	...	498	1282	2201	1.726954e-05	4.445692e-05	7.632581e-05	-4.117329e+00	...	370	28780707	...	1.285583e-05
TCGA-HU-A4GT-01A-21D-A25D-08	1918	1887	31	1449	1.616267e-02	coding only	1	28836904	...	437	1097	1916	1.515419e-05	3.804153e-05	6.644264e-05	-4.177553e+00	...	351	28780707	...	1.219567e-05
TCGA-HU-A4GU-01A-11D-A25D-08	1822	1785	37	1331	2.030735e-02	coding only	1	28836904	...	454	1100	1822	1.574372e-05	3.814557e-05	6.318293e-05	-4.199400e+00	...	230	28780707	...	7.991465e-06
TCGA-HU-A4GX-01A-12D-A25D-08	1557	1533	24	1188	1.541426e-02	coding only	1	28836904	...	345	881	1557	1.196384e-05	3.055113e-05	5.399331e-05	-4.267660e+00	...	306	28780707	...	1.063212e-05
TCGA-HU-A4GY-01A-21D-A24D-08	93	91	2	72	2.150538e-02	coding only	1	28836904	...	19	71	93	6.588779e-07	2.462123e-06	3.225034e-06	-5.491466e+00	...	1	28780707	...	3.474550e-08
TCGA-HU-A4H0-01A-11D-A25D-08	202	198	4	155	1.980198e-02	coding only	1	28836904	...	43	150	202	1.491145e-06	5.201668e-06	7.004913e-06	-5.154597e+00	...	5	28780707	...	1.737275e-07
TCGA-HU-A4H2-01A-11D-A25D-08	200	192	8	152	4.000000e-02	exome+100bp flanks	2	35888610	...	40	149	200	1.114560e-06	4.151735e-06	5.572799e-06	-5.253927e+00	...	3	32165001	...	9.326908e-08
TCGA-HU-A4H3-01A-21D-A25D-08	1085	1058	27	825	2.488479e-02	coding only	1	28836904	...	233	600	1085	8.079924e-06	2.080667e-05	3.762540e-05	-4.424519e+00	...	225	28780707	...	7.817737e-06
TCGA-HU-A4H4-01A-21D-A25D-08	809	794	15	611	1.854141e-02	coding only	1	28836904	...	183	526	809	6.346035e-06	1.824052e-05	2.805433e-05	-4.552000e+00	...	85	28780707	...	2.953367e-06
TCGA-HU-A4H5-01A-21D-A25D-08	309	306	3	244	9.708738e-03	coding only	1	28836904	...	62	229	309	2.150023e-06	7.941213e-06	1.071544e-05	-4.969990e+00	...	15	28780707	...	5.211825e-07
TCGA-HU-A4H6-01A-11D-A25D-08	145	144	1	104	6.896552e-03	coding only	1	28836904	...	40	103	145	1.387111e-06	3.571812e-06	5.028279e-06	-5.298581e+00	...	1	28780707	...	3.474550e-08
TCGA-HU-A4H8-01A-11D-A25D-08	1467	1442	25	1107	1.704158e-02	coding only	1	28836904	...	335	847	1465	1.161706e-05	2.937209e-05	5.080296e-05	-4.294111e+00	...	258	28780707	...	8.964339e-06
TCGA-HU-A4HB-01A-12D-A25D-08	16	15	1	13	6.250000e-02	coding only	1	28836904	...	2	13	16	6.935557e-08	4.508112e-07	5.548446e-07	-6.255829e+00	...	0	28780707	...	0
TCGA-HU-A4HD-01A-11D-A25D-08	222	216	6	164	2.702703e-02	coding only	1	28836904	...	52	158	222	1.803245e-06	5.479090e-06	7.698469e-06	-5.113596e+00	...	6	28780707	...	2.084730e-07
TCGA-IC-A6RE-01A-11D-A33E-09	705	689	16	558	2.269504e-02	coding only	1	28836904	...	126	531	686	4.369401e-06	1.841390e-05	2.378896e-05	-4.623625e+00	...	14	28780707	...	4.864370e-07
TCGA-IC-A6RF-01A-13D-A33E-09	270	266	4	198	1.481481e-02	coding only	1	28836904	...	67	187	264	2.323412e-06	6.484746e-06	9.154936e-06	-5.038345e+00	...	6	28780707	...	2.084730e-07
TCGA-IG-A3I8-01A-11D-A247-09	158	157	1	114	6.329114e-03	coding only	1	28836904	...	43	105	154	1.491145e-06	3.641168e-06	5.340379e-06	-5.272428e+00	...	5	28780707	...	1.737275e-07
TCGA-IG-A3QL-01A-11D-A247-09	138	137	1	101	7.246377e-03	coding only	1	28836904	...	36	93	136	1.248400e-06	3.225034e-06	4.716179e-06	-5.326410e+00	...	6	28780707	...	2.084730e-07
TCGA-IG-A3Y9-01A-12D-A247-09	287	279	8	207	2.787456e-02	coding only	1	28836904	...	71	200	280	2.462123e-06	6.935557e-06	9.709780e-06	-5.012791e+00	...	2	28780707	...	6.949100e-08
TCGA-IG-A3YA-01A-11D-A247-09	114	112	2	94	1.754386e-02	coding only	1	28836904	...	17	92	112	5.895224e-07	3.190356e-06	3.883912e-06	-5.410731e+00	...	1	28780707	...	3.474550e-08
TCGA-IG-A3YB-01A-11D-A247-09	107	102	5	86	4.672897e-02	exome+100bp flanks	2	35888610	...	16	76	106	4.458239e-07	2.117664e-06	2.953583e-06	-5.529651e+00	...	9	32165001	...	2.798072e-07
TCGA-IG-A3YC-01A-11D-A247-09	103	99	4	77	3.883495e-02	coding only	1	28836904	...	22	73	103	7.629113e-07	2.531478e-06	3.571812e-06	-5.447111e+00	...	4	28780707	...	1.389820e-07
TCGA-IG-A4P3-01A-11D-A27G-09	464	457	7	372	1.508621e-02	coding only	1	28836904	...	83	363	459	2.878256e-06	1.258804e-05	1.591710e-05	-4.798136e+00	...	6	28780707	...	2.084730e-07
TCGA-IG-A4QS-01A-11D-A27G-09	289	283	6	233	2.076125e-02	coding only	1	28836904	...	50	214	286	1.733889e-06	7.421046e-06	9.917847e-06	-5.003583e+00	...	17	28780707	...	5.906735e-07
TCGA-IG-A4QT-01A-21D-A27G-09	34	34	0	25	0	coding only	1	28836904	...	9	17	33	3.121001e-07	5.895224e-07	1.144367e-06	-5.941435e+00	...	7	28780707	...	2.432185e-07
TCGA-IG-A50L-01A-11D-A27G-09	180	178	2	148	1.111111e-02	coding only	1	28836904	...	30	131	175	1.040334e-06	4.542790e-06	6.068613e-06	-5.216911e+00	...	12	28780707	...	4.169460e-07
TCGA-IG-A51D-01A-11D-A27G-09	214	209	5	155	2.336449e-02	coding only	1	28836904	...	53	149	212	1.837923e-06	5.166990e-06	7.351691e-06	-5.133613e+00	...	5	28780707	...	1.737275e-07
TCGA-IG-A5B8-01A-11D-A28B-09	342	337	5	238	1.461988e-02	coding only	1	28836904	...	97	230	338	3.363745e-06	7.975891e-06	1.172109e-05	-4.931032e+00	...	5	28780707	...	1.737275e-07
TCGA-IG-A5S3-01A-11D-A28B-09	89	84	5	65	5.617978e-02	coding only	1	28836904	...	19	61	87	6.588779e-07	2.115345e-06	3.016967e-06	-5.520429e+00	...	2	28780707	...	6.949100e-08
TCGA-IG-A625-01A-11D-A31U-09	124	121	3	96	2.419355e-02	coding only	1	28836904	...	25	77	123	8.669447e-07	2.670190e-06	4.265368e-06	-5.370044e+00	...	18	28780707	...	6.254190e-07
TCGA-IG-A6QS-01A-12D-A33E-09	171	167	4	129	2.339181e-02	coding only	1	28836904	...	38	121	170	1.317756e-06	4.196012e-06	5.895224e-06	-5.229500e+00	...	7	28780707	...	2.432185e-07
TCGA-IG-A7DP-01A-31D-A33E-09	86	85	1	68	1.162791e-02	coding only	1	28836904	...	17	60	85	5.895224e-07	2.080667e-06	2.947612e-06	-5.530530e+00	...	7	28780707	...	2.432185e-07
TCGA-IG-A8O2-01A-11D-A36J-09	224	215	9	170	4.017857e-02	exome+100bp flanks	2	35888610	...	45	163	224	1.253880e-06	4.541831e-06	6.241535e-06	-5.204709e+00	...	7	32165001	...	2.176278e-07
TCGA-IG-A97H-01A-11D-A387-09	224	220	4	180	1.785714e-02	coding only	1	28836904	...	39	160	221	1.352434e-06	5.548446e-06	7.663791e-06	-5.115556e+00	...	18	28780707	...	6.254190e-07
TCGA-IG-A97I-01A-11D-A387-09	177	177	0	131	0	coding only	1	28836904	...	46	120	173	1.595178e-06	4.161334e-06	5.999257e-06	-5.221903e+00	...	7	28780707	...	2.432185e-07
TCGA-IN-7806-01A-11D-2053-08	89	88	1	69	1.123596e-02	coding only	1	28836904	...	19	65	89	6.588779e-07	2.254056e-06	3.086323e-06	-5.510559e+00	...	4	28780707	...	1.389820e-07
TCGA-IN-7808-01A-11D-2201-08	135	131	4	103	2.962963e-02	coding only	1	28836904	...	28	96	135	9.709780e-07	3.329068e-06	4.681501e-06	-5.329615e+00	...	7	28780707	...	2.432185e-07
TCGA-IN-8462-01A-11D-2340-08	160	157	3	122	1.875000e-02	coding only	1	28836904	...	35	111	160	1.213723e-06	3.849234e-06	5.548446e-06	-5.255829e+00	...	11	28780707	...	3.822005e-07
TCGA-IN-8663-01A-11D-2394-08	199	198	1	148	5.025126e-03	coding only	1	28836904	...	50	140	198	1.733889e-06	4.854890e-06	6.866202e-06	-5.163283e+00	...	7	28780707	...	2.432185e-07
TCGA-IN-A6RI-01A-11D-A32N-08	113	111	2	83	1.769912e-02	coding only	1	28836904	...	28	82	113	9.709780e-07	2.843578e-06	3.918590e-06	-5.406870e+00	...	1	28780707	...	3.474550e-08
TCGA-IN-A6RJ-01A-21D-A33T-08	162	162	0	118	0	coding only	1	28836904	...	44	109	162	1.525823e-06	3.779879e-06	5.617801e-06	-5.250434e+00	...	9	28780707	...	3.127095e-07
TCGA-IN-A6RL-01A-11D-A32N-08	528	520	8	405	1.515152e-02	coding only	1	28836904	...	115	390	528	3.987945e-06	1.352434e-05	1.830987e-05	-4.737315e+00	...	15	28780707	...	5.211825e-07
TCGA-IN-A6RN-01A-12D-A33T-08	133	132	1	96	7.518797e-03	coding only	1	28836904	...	36	94	133	1.248400e-06	3.259712e-06	4.612146e-06	-5.336097e+00	...	2	28780707	...	6.949100e-08
TCGA-IN-A6RO-01A-12D-A33T-08	330	326	4	259	1.212121e-02	coding only	1	28836904	...	67	244	330	2.323412e-06	8.461380e-06	1.144367e-05	-4.941435e+00	...	15	28780707	...	5.211825e-07
TCGA-IN-A6RP-01A-21D-A33T-08	204	200	4	160	1.960784e-02	coding only	1	28836904	...	40	143	204	1.387111e-06	4.958923e-06	7.074268e-06	-5.150318e+00	...	17	28780707	...	5.906735e-07
TCGA-IN-A6RR-01A-12D-A32N-08	189	186	3	137	1.587302e-02	coding only	1	28836904	...	49	128	189	1.699212e-06	4.438757e-06	6.554102e-06	-5.183487e+00	...	9	28780707	...	3.127095e-07
TCGA-IN-A6RS-01A-12D-A34U-08	114	113	1	82	8.771930e-03	coding only	1	28836904	...	31	77	114	1.075011e-06	2.670190e-06	3.953268e-06	-5.403044e+00	...	5	28780707	...	1.737275e-07
TCGA-IN-A7NR-01A-11D-A34U-08	89	88	1	66	1.123596e-02	coding only	1	28836904	...	22	64	89	7.629113e-07	2.219378e-06	3.086323e-06	-5.510559e+00	...	2	28780707	...	6.949100e-08
TCGA-IN-A7NT-01A-21D-A34U-08	128	126	2	90	1.562500e-02	coding only	1	28836904	...	36	80	128	1.248400e-06	2.774223e-06	4.438757e-06	-5.352739e+00	...	10	28780707	...	3.474550e-07
TCGA-IN-A7NU-01A-22D-A34U-08	99	97	2	73	2.020202e-02	coding only	1	28836904	...	24	68	99	8.322669e-07	2.358089e-06	3.433101e-06	-5.464313e+00	...	5	28780707	...	1.737275e-07
TCGA-IN-AB1V-01A-21D-A410-08	67	65	2	42	2.985075e-02	coding only	1	28836904	...	23	38	67	7.975891e-07	1.317756e-06	2.323412e-06	-5.633874e+00	...	4	28780707	...	1.389820e-07
TCGA-IN-AB1X-01A-11D-A397-08	126	124	2	104	1.587302e-02	coding only	1	28836904	...	20	98	126	6.935557e-07	3.398423e-06	4.369401e-06	-5.359578e+00	...	6	28780707	...	2.084730e-07
TCGA-IP-7968-01A-11D-2201-08	121	118	3	96	2.479339e-02	coding only	1	28836904	...	22	92	121	7.629113e-07	3.190356e-06	4.196012e-06	-5.377163e+00	...	4	28780707	...	1.389820e-07
TCGA-JY-A6F8-01A-11D-A33E-09	392	378	14	303	3.571429e-02	exome+100bp flanks	2	35888610	...	73	289	386	2.034072e-06	8.052694e-06	1.075550e-05	-4.968369e+00	...	10	32165001	...	3.108969e-07
TCGA-JY-A6FA-01A-11D-A33E-09	223	219	4	178	1.793722e-02	coding only	1	28836904	...	41	163	219	1.421789e-06	5.652479e-06	7.594435e-06	-5.119505e+00	...	11	28780707	...	3.822005e-07
TCGA-JY-A6FB-01A-11D-A33E-09	269	264	5	191	1.858736e-02	coding only	1	28836904	...	73	182	268	2.531478e-06	6.311357e-06	9.293647e-06	-5.031814e+00	...	8	28780707	...	2.779640e-07
TCGA-JY-A6FD-01A-11D-A33E-09	302	296	6	230	1.986755e-02	coding only	1	28836904	...	64	210	297	2.219378e-06	7.282335e-06	1.029930e-05	-4.987192e+00	...	17	28780707	...	5.906735e-07
TCGA-JY-A6FE-01A-11D-A33E-09	173	167	6	139	3.468208e-02	exome+100bp flanks	2	35888610	...	28	132	171	7.801918e-07	3.678047e-06	4.764743e-06	-5.321961e+00	...	5	32165001	...	1.554485e-07
TCGA-JY-A6FG-01A-11D-A33E-09	349	342	7	264	2.005731e-02	coding only	1	28836904	...	76	241	343	2.635512e-06	8.357347e-06	1.189448e-05	-4.924655e+00	...	19	28780707	...	6.601645e-07
TCGA-JY-A6FH-01A-11D-A33E-09	291	289	2	224	6.872852e-03	coding only	1	28836904	...	65	214	287	2.254056e-06	7.421046e-06	9.952525e-06	-5.002067e+00	...	6	28780707	...	2.084730e-07
TCGA-JY-A938-01A-11D-A37C-09	228	226	2	175	8.771930e-03	coding only	1	28836904	...	50	159	224	1.733889e-06	5.513768e-06	7.767824e-06	-5.109701e+00	...	13	28780707	...	4.516915e-07
TCGA-JY-A939-01A-12D-A37C-09	201	197	4	157	1.990050e-02	coding only	1	28836904	...	40	146	195	1.387111e-06	5.062957e-06	6.762168e-06	-5.169914e+00	...	6	28780707	...	2.084730e-07
TCGA-JY-A93C-01A-11D-A387-09	189	186	3	139	1.587302e-02	coding only	1	28836904	...	46	125	186	1.595178e-06	4.334723e-06	6.450068e-06	-5.190436e+00	...	12	28780707	...	4.169460e-07
TCGA-JY-A93D-01A-11D-A387-09	294	291	3	224	1.020408e-02	coding only	1	28836904	...	67	208	289	2.323412e-06	7.212980e-06	1.002188e-05	-4.999051e+00	...	11	28780707	...	3.822005e-07
TCGA-JY-A93E-01A-11D-A37C-09	287	279	8	212	2.787456e-02	coding only	1	28836904	...	65	205	283	2.254056e-06	7.108946e-06	9.813814e-06	-5.008162e+00	...	5	28780707	...	1.737275e-07
TCGA-JY-A93F-01A-21D-A37C-09	210	206	4	164	1.904762e-02	coding only	1	28836904	...	40	150	204	1.387111e-06	5.201668e-06	7.074268e-06	-5.150318e+00	...	9	28780707	...	3.127095e-07
TCGA-KB-A6F5-01A-12D-A33T-08	76	75	1	55	1.315789e-02	coding only	1	28836904	...	20	49	76	6.935557e-07	1.699212e-06	2.635512e-06	-5.579135e+00	...	6	28780707	...	2.084730e-07
TCGA-KB-A6F7-01A-12D-A32N-08	125	123	2	97	1.600000e-02	coding only	1	28836904	...	26	87	125	9.016224e-07	3.016967e-06	4.334723e-06	-5.363039e+00	...	10	28780707	...	3.474550e-07
TCGA-KB-A93G-01A-11D-A397-08	91	88	3	67	3.296703e-02	coding only	1	28836904	...	21	65	91	7.282335e-07	2.254056e-06	3.155679e-06	-5.500907e+00	...	2	28780707	...	6.949100e-08
TCGA-KB-A93J-01A-11D-A397-08	161	158	3	147	1.863354e-02	coding only	1	28836904	...	11	38	161	3.814557e-07	1.317756e-06	5.583124e-06	-5.253123e+00	...	109	28780707	...	3.787259e-06
TCGA-KH-A6WC-01A-11D-A33E-09	224	221	3	182	1.339286e-02	coding only	1	28836904	...	38	177	219	1.317756e-06	6.137968e-06	7.594435e-06	-5.119505e+00	...	1	28780707	...	3.474550e-08
TCGA-L5-A43C-01A-11D-A247-09	182	179	3	145	1.648352e-02	coding only	1	28836904	...	34	137	181	1.179045e-06	4.750857e-06	6.276679e-06	-5.202270e+00	...	7	28780707	...	2.432185e-07
TCGA-L5-A43E-01A-11D-A247-09	230	226	4	175	1.739130e-02	coding only	1	28836904	...	48	162	221	1.664534e-06	5.617801e-06	7.663791e-06	-5.115556e+00	...	7	28780707	...	2.432185e-07
TCGA-L5-A43H-01A-11D-A247-09	135	132	3	107	2.222222e-02	coding only	1	28836904	...	25	102	135	8.669447e-07	3.537134e-06	4.681501e-06	-5.329615e+00	...	5	28780707	...	1.737275e-07
TCGA-L5-A43I-01A-11D-A247-09	261	258	3	196	1.149425e-02	coding only	1	28836904	...	62	185	259	2.150023e-06	6.415391e-06	8.981547e-06	-5.046649e+00	...	9	28780707	...	3.127095e-07
TCGA-L5-A43J-01A-12D-A247-09	885	870	15	692	1.694915e-02	coding only	1	28836904	...	177	516	879	6.137968e-06	1.789374e-05	3.048177e-05	-4.515960e+00	...	171	28780707	...	5.941480e-06
TCGA-L5-A43M-01A-11D-A247-09	76	76	0	55	0	coding only	1	28836904	...	20	51	75	6.935557e-07	1.768567e-06	2.600834e-06	-5.584887e+00	...	4	28780707	...	1.389820e-07
TCGA-L5-A4OE-01A-11D-A27G-09	388	382	6	293	1.546392e-02	coding only	1	28836904	...	89	281	382	3.086323e-06	9.744458e-06	1.324691e-05	-4.877885e+00	...	7	28780707	...	2.432185e-07
TCGA-L5-A4OF-01A-11D-A27G-09	113	111	2	93	1.769912e-02	coding only	1	28836904	...	18	78	109	6.242002e-07	2.704867e-06	3.779879e-06	-5.422522e+00	...	11	28780707	...	3.822005e-07
TCGA-L5-A4OG-01A-11D-A27G-09	214	211	3	170	1.401869e-02	coding only	1	28836904	...	41	162	213	1.421789e-06	5.617801e-06	7.386369e-06	-5.131569e+00	...	6	28780707	...	2.084730e-07
TCGA-L5-A4OH-01A-11D-A27G-09	393	386	7	313	1.781170e-02	coding only	1	28836904	...	71	296	385	2.462123e-06	1.026462e-05	1.335095e-05	-4.874488e+00	...	11	28780707	...	3.822005e-07
TCGA-L5-A4OI-01A-11D-A27G-09	2365	2320	45	1827	1.902748e-02	coding only	1	28836904	...	487	1384	2325	1.688808e-05	4.799406e-05	8.062585e-05	-4.093526e+00	...	409	28780707	...	1.421091e-05
TCGA-L5-A4OJ-01A-11D-A27G-09	493	490	3	385	6.085193e-03	coding only	1	28836904	...	103	366	485	3.571812e-06	1.269207e-05	1.681873e-05	-4.774207e+00	...	13	28780707	...	4.516915e-07
TCGA-L5-A4OM-01A-11D-A27G-09	88	88	0	73	0	coding only	1	28836904	...	14	67	86	4.854890e-07	2.323412e-06	2.982290e-06	-5.525450e+00	...	5	28780707	...	1.737275e-07
TCGA-L5-A4ON-01A-11D-A27G-09	192	186	6	144	3.125000e-02	exome+100bp flanks	2	35888610	...	41	140	189	1.142424e-06	3.900959e-06	5.266295e-06	-5.278495e+00	...	3	32165001	...	9.326908e-08
TCGA-L5-A4OO-01A-11D-A27G-09	136	135	1	104	7.352941e-03	coding only	1	28836904	...	31	97	134	1.075011e-06	3.363745e-06	4.646823e-06	-5.332844e+00	...	5	28780707	...	1.737275e-07
TCGA-L5-A4OP-01A-11D-A27G-09	142	141	1	114	7.042254e-03	coding only	1	28836904	...	27	107	139	9.363002e-07	3.710523e-06	4.820212e-06	-5.316934e+00	...	4	28780707	...	1.389820e-07
TCGA-L5-A4OQ-01A-11D-A27G-09	90	88	2	69	2.222222e-02	coding only	1	28836904	...	18	67	88	6.242002e-07	2.323412e-06	3.051645e-06	-5.515466e+00	...	1	28780707	...	3.474550e-08
TCGA-L5-A4OR-01A-11D-A27G-09	215	214	1	158	4.651163e-03	coding only	1	28836904	...	54	150	212	1.872600e-06	5.201668e-06	7.351691e-06	-5.133613e+00	...	7	28780707	...	2.432185e-07
TCGA-L5-A4OS-01A-11D-A28B-09	135	134	1	107	7.407407e-03	coding only	1	28836904	...	26	104	134	9.016224e-07	3.606490e-06	4.646823e-06	-5.332844e+00	...	3	28780707	...	1.042365e-07
TCGA-L5-A4OT-01A-11D-A28B-09	287	286	1	229	3.484321e-03	coding only	1	28836904	...	55	217	279	1.907278e-06	7.525080e-06	9.675102e-06	-5.014344e+00	...	6	28780707	...	2.084730e-07
TCGA-L5-A4OU-01A-11D-A28B-09	226	224	2	161	8.849558e-03	coding only	1	28836904	...	62	152	222	2.150023e-06	5.271024e-06	7.698469e-06	-5.113596e+00	...	7	28780707	...	2.432185e-07
TCGA-L5-A4OW-01A-11D-A28B-09	300	298	2	236	6.666667e-03	coding only	1	28836904	...	58	224	290	2.011312e-06	7.767824e-06	1.005656e-05	-4.997551e+00	...	6	28780707	...	2.084730e-07
TCGA-L5-A4OX-01A-21D-A28B-09	170	164	6	123	3.529412e-02	exome+100bp flanks	2	35888610	...	40	111	165	1.114560e-06	3.092903e-06	4.597559e-06	-5.337473e+00	...	8	32165001	...	2.487175e-07
TCGA-L5-A88S-01A-11D-A36J-09	183	179	4	142	2.185792e-02	coding only	1	28836904	...	36	137	180	1.248400e-06	4.750857e-06	6.242002e-06	-5.204676e+00	...	4	28780707	...	1.389820e-07
TCGA-L5-A88T-01A-11D-A351-09	130	129	1	107	7.692308e-03	coding only	1	28836904	...	21	101	128	7.282335e-07	3.502456e-06	4.438757e-06	-5.352739e+00	...	5	28780707	...	1.737275e-07
TCGA-L5-A88V-01A-11D-A351-09	216	211	5	164	2.314815e-02	coding only	1	28836904	...	45	156	211	1.560500e-06	5.409735e-06	7.317013e-06	-5.135666e+00	...	5	28780707	...	1.737275e-07
TCGA-L5-A88W-01A-11D-A351-09	199	192	7	155	3.517588e-02	exome+100bp flanks	2	35888610	...	37	144	197	1.030968e-06	4.012415e-06	5.489207e-06	-5.260490e+00	...	9	32165001	...	2.798072e-07
TCGA-L5-A88Y-01A-11D-A351-09	3	2	1	2	3.333333e-01	coding only	1	28836904	...	0	2	3	0	6.935557e-08	1.040334e-07	-6.982827e+00	...	0	28780707	...	0
TCGA-L5-A88Z-01A-11D-A36J-09	222	222	0	171	0	coding only	1	28836904	...	50	155	217	1.733889e-06	5.375057e-06	7.525080e-06	-5.123489e+00	...	12	28780707	...	4.169460e-07
TCGA-L5-A891-01A-11D-A36J-09	305	301	4	240	1.311475e-02	coding only	1	28836904	...	60	221	301	2.080667e-06	7.663791e-06	1.043801e-05	-4.981382e+00	...	16	28780707	...	5.559280e-07
TCGA-L5-A893-01A-11D-A36J-09	288	283	5	223	1.736111e-02	coding only	1	28836904	...	60	217	288	2.080667e-06	7.525080e-06	9.987203e-06	-5.000556e+00	...	6	28780707	...	2.084730e-07
TCGA-L5-A8NE-01A-11D-A37C-09	354	348	6	283	1.694915e-02	coding only	1	28836904	...	64	261	345	2.219378e-06	9.050902e-06	1.196384e-05	-4.922130e+00	...	15	28780707	...	5.211825e-07
TCGA-L5-A8NF-01A-11D-A37C-09	270	266	4	205	1.481481e-02	coding only	1	28836904	...	60	190	266	2.080667e-06	6.588779e-06	9.224291e-06	-5.035067e+00	...	12	28780707	...	4.169460e-07
TCGA-L5-A8NG-01A-11D-A37C-09	309	304	5	239	1.618123e-02	coding only	1	28836904	...	64	221	304	2.219378e-06	7.663791e-06	1.054205e-05	-4.977075e+00	...	14	28780707	...	4.864370e-07
TCGA-L5-A8NH-01A-11D-A37C-09	315	312	3	262	9.523810e-03	coding only	1	28836904	...	50	245	312	1.733889e-06	8.496058e-06	1.081947e-05	-4.965794e+00	...	14	28780707	...	4.864370e-07
TCGA-L5-A8NI-01A-11D-A37C-09	322	315	7	250	2.173913e-02	coding only	1	28836904	...	61	235	312	2.115345e-06	8.149280e-06	1.081947e-05	-4.965794e+00	...	10	28780707	...	3.474550e-07
TCGA-L5-A8NJ-01A-11D-A36J-09	361	357	4	279	1.108033e-02	coding only	1	28836904	...	76	267	355	2.635512e-06	9.258969e-06	1.231061e-05	-4.909720e+00	...	8	28780707	...	2.779640e-07
TCGA-L5-A8NK-01A-21D-A37C-09	331	325	6	256	1.812689e-02	coding only	1	28836904	...	68	241	326	2.358089e-06	8.357347e-06	1.130496e-05	-4.946731e+00	...	11	28780707	...	3.822005e-07
TCGA-L5-A8NL-01A-12D-A37C-09	254	253	1	200	3.937008e-03	coding only	1	28836904	...	51	187	248	1.768567e-06	6.484746e-06	8.600091e-06	-5.065497e+00	...	9	28780707	...	3.127095e-07
TCGA-L5-A8NM-01A-11D-A37C-09	2057	2016	41	1577	1.993194e-02	coding only	1	28836904	...	434	1176	2025	1.505016e-05	4.078108e-05	7.022252e-05	-4.153524e+00	...	375	28780707	...	1.302956e-05
TCGA-L5-A8NN-01A-11D-A37C-09	226	222	4	170	1.769912e-02	coding only	1	28836904	...	50	154	217	1.733889e-06	5.340379e-06	7.525080e-06	-5.123489e+00	...	9	28780707	...	3.127095e-07
TCGA-L5-A8NQ-01A-11D-A36J-09	378	369	9	285	2.380952e-02	coding only	1	28836904	...	81	274	369	2.808901e-06	9.501713e-06	1.279610e-05	-4.892922e+00	...	5	28780707	...	1.737275e-07
TCGA-L5-A8NR-01A-11D-A37C-09	343	337	6	251	1.749271e-02	coding only	1	28836904	...	83	231	338	2.878256e-06	8.010569e-06	1.172109e-05	-4.931032e+00	...	18	28780707	...	6.254190e-07
TCGA-L5-A8NS-01A-12D-A37C-09	511	498	13	413	2.544031e-02	coding only	1	28836904	...	84	378	502	2.912934e-06	1.310820e-05	1.740825e-05	-4.759245e+00	...	28	28780707	...	9.728739e-07
TCGA-L5-A8NT-01A-11D-A37C-09	221	220	1	170	4.524887e-03	coding only	1	28836904	...	50	153	215	1.733889e-06	5.305701e-06	7.455724e-06	-5.127510e+00	...	11	28780707	...	3.822005e-07
TCGA-L5-A8NU-01A-11D-A36J-09	130	129	1	99	7.692308e-03	coding only	1	28836904	...	30	86	125	1.040334e-06	2.982290e-06	4.334723e-06	-5.363039e+00	...	9	28780707	...	3.127095e-07
TCGA-L5-A8NV-01A-11D-A37C-09	268	263	5	214	1.865672e-02	coding only	1	28836904	...	48	204	264	1.664534e-06	7.074268e-06	9.154936e-06	-5.038345e+00	...	7	28780707	...	2.432185e-07
TCGA-L5-A8NW-01A-11D-A37C-09	333	331	2	252	6.006006e-03	coding only	1	28836904	...	77	229	327	2.670190e-06	7.941213e-06	1.133964e-05	-4.945401e+00	...	19	28780707	...	6.601645e-07
TCGA-L7-A56G-01A-21D-A27G-09	106	102	4	82	3.773585e-02	coding only	1	28836904	...	20	79	106	6.935557e-07	2.739545e-06	3.675845e-06	-5.434643e+00	...	3	28780707	...	1.042365e-07
TCGA-L7-A6VZ-01A-12D-A33E-09	401	391	10	304	2.493766e-02	coding only	1	28836904	...	86	289	396	2.982290e-06	1.002188e-05	1.373240e-05	-4.862253e+00	...	11	28780707	...	3.822005e-07
TCGA-LN-A49K-01A-11D-A247-09	111	108	3	84	2.702703e-02	coding only	1	28836904	...	24	78	109	8.322669e-07	2.704867e-06	3.779879e-06	-5.422522e+00	...	4	28780707	...	1.389820e-07
TCGA-LN-A49L-01A-11D-A247-09	196	191	5	163	2.551020e-02	coding only	1	28836904	...	27	150	191	9.363002e-07	5.201668e-06	6.623457e-06	-5.178915e+00	...	9	28780707	...	3.127095e-07
TCGA-LN-A49M-01A-21D-A27G-09	286	278	8	208	2.797203e-02	coding only	1	28836904	...	68	198	278	2.358089e-06	6.866202e-06	9.640425e-06	-5.015904e+00	...	7	28780707	...	2.432185e-07
TCGA-LN-A49N-01A-11D-A247-09	87	87	0	66	0	coding only	1	28836904	...	20	58	85	6.935557e-07	2.011312e-06	2.947612e-06	-5.530530e+00	...	7	28780707	...	2.432185e-07
TCGA-LN-A49O-01A-11D-A247-09	103	99	4	81	3.883495e-02	coding only	1	28836904	...	18	74	103	6.242002e-07	2.566156e-06	3.571812e-06	-5.447111e+00	...	7	28780707	...	2.432185e-07
TCGA-LN-A49P-01A-11D-A247-09	95	95	0	79	0	coding only	1	28836904	...	15	73	92	5.201668e-07	2.531478e-06	3.190356e-06	-5.496161e+00	...	4	28780707	...	1.389820e-07
TCGA-LN-A49R-01A-11D-A247-09	156	154	2	131	1.282051e-02	coding only	1	28836904	...	23	121	154	7.975891e-07	4.196012e-06	5.340379e-06	-5.272428e+00	...	8	28780707	...	2.779640e-07
TCGA-LN-A49S-01A-11D-A247-09	204	198	6	145	2.941176e-02	coding only	1	28836904	...	52	141	203	1.803245e-06	4.889568e-06	7.039591e-06	-5.152453e+00	...	4	28780707	...	1.389820e-07
TCGA-LN-A49U-01A-31D-A27G-09	186	183	3	138	1.612903e-02	coding only	1	28836904	...	45	134	185	1.560500e-06	4.646823e-06	6.415391e-06	-5.192777e+00	...	3	28780707	...	1.042365e-07
TCGA-LN-A49V-01A-11D-A247-09	125	123	2	86	1.600000e-02	coding only	1	28836904	...	37	78	124	1.283078e-06	2.704867e-06	4.300046e-06	-5.366527e+00	...	7	28780707	...	2.432185e-07
TCGA-LN-A49W-01A-11D-A27G-09	140	136	4	105	2.857143e-02	coding only	1	28836904	...	29	93	137	1.005656e-06	3.225034e-06	4.750857e-06	-5.323228e+00	...	11	28780707	...	3.822005e-07
TCGA-LN-A49X-01A-31D-A27G-09	134	130	4	101	2.985075e-02	coding only	1	28836904	...	29	91	133	1.005656e-06	3.155679e-06	4.612146e-06	-5.336097e+00	...	9	28780707	...	3.127095e-07
TCGA-LN-A49Y-01A-11D-A27G-09	299	295	4	224	1.337793e-02	coding only	1	28836904	...	70	213	293	2.427445e-06	7.386369e-06	1.016059e-05	-4.993081e+00	...	6	28780707	...	2.084730e-07
TCGA-LN-A4A1-01A-21D-A27G-09	193	189	4	150	2.072539e-02	coding only	1	28836904	...	39	141	192	1.352434e-06	4.889568e-06	6.658135e-06	-5.176647e+00	...	8	28780707	...	2.779640e-07
TCGA-LN-A4A2-01A-31D-A27G-09	200	196	4	149	2.000000e-02	coding only	1	28836904	...	47	142	200	1.629856e-06	4.924246e-06	6.935557e-06	-5.158919e+00	...	7	28780707	...	2.432185e-07
TCGA-LN-A4A3-01A-11D-A27G-09	117	116	1	93	8.547009e-03	coding only	1	28836904	...	23	89	116	7.975891e-07	3.086323e-06	4.022623e-06	-5.395491e+00	...	3	28780707	...	1.042365e-07
TCGA-LN-A4A4-01A-11D-A27G-09	149	146	3	116	2.013423e-02	coding only	1	28836904	...	30	109	148	1.040334e-06	3.779879e-06	5.132312e-06	-5.289687e+00	...	6	28780707	...	2.084730e-07
TCGA-LN-A4A5-01A-21D-A27G-09	121	119	2	97	1.652893e-02	coding only	1	28836904	...	21	88	118	7.282335e-07	3.051645e-06	4.091979e-06	-5.388067e+00	...	8	28780707	...	2.779640e-07
TCGA-LN-A4A6-01A-11D-A27G-09	159	156	3	128	1.886792e-02	coding only	1	28836904	...	27	117	156	9.363002e-07	4.057301e-06	5.409735e-06	-5.266824e+00	...	9	28780707	...	3.127095e-07
TCGA-LN-A4A8-01A-32D-A27G-09	174	168	6	130	3.448276e-02	exome+100bp flanks	2	35888610	...	37	117	170	1.030968e-06	3.260087e-06	4.736879e-06	-5.324508e+00	...	10	32165001	...	3.108969e-07
TCGA-LN-A4A9-01A-11D-A28B-09	251	250	1	199	3.984064e-03	coding only	1	28836904	...	49	184	242	1.699212e-06	6.380713e-06	8.392024e-06	-5.076133e+00	...	8	28780707	...	2.779640e-07
TCGA-LN-A4MQ-01A-11D-A28B-09	95	93	2	72	2.105263e-02	coding only	1	28836904	...	20	67	93	6.935557e-07	2.323412e-06	3.225034e-06	-5.491466e+00	...	4	28780707	...	1.389820e-07
TCGA-LN-A4MR-01A-11D-A28B-09	198	196	2	157	1.010101e-02	coding only	1	28836904	...	39	147	195	1.352434e-06	5.097635e-06	6.762168e-06	-5.169914e+00	...	7	28780707	...	2.432185e-07
TCGA-LN-A5U5-01A-21D-A28B-09	75	74	1	54	1.333333e-02	coding only	1	28836904	...	20	50	75	6.935557e-07	1.733889e-06	2.600834e-06	-5.584887e+00	...	4	28780707	...	1.389820e-07
TCGA-LN-A5U6-01A-11D-A28B-09	123	121	2	101	1.626016e-02	coding only	1	28836904	...	20	86	120	6.935557e-07	2.982290e-06	4.161334e-06	-5.380767e+00	...	12	28780707	...	4.169460e-07
TCGA-LN-A5U7-01A-11D-A31U-09	208	207	1	157	4.807692e-03	coding only	1	28836904	...	49	148	203	1.699212e-06	5.132312e-06	7.039591e-06	-5.152453e+00	...	5	28780707	...	1.737275e-07
TCGA-LN-A7HV-01A-21D-A351-09	156	152	4	121	2.564103e-02	coding only	1	28836904	...	31	113	156	1.075011e-06	3.918590e-06	5.409735e-06	-5.266824e+00	...	8	28780707	...	2.779640e-07
TCGA-LN-A7HW-01A-22D-A351-09	140	138	2	109	1.428571e-02	coding only	1	28836904	...	29	104	138	1.005656e-06	3.606490e-06	4.785535e-06	-5.320070e+00	...	3	28780707	...	1.042365e-07
TCGA-LN-A7HX-01A-11D-A33E-09	307	299	8	240	2.605863e-02	coding only	1	28836904	...	58	231	303	2.011312e-06	8.010569e-06	1.050737e-05	-4.978506e+00	...	7	28780707	...	2.432185e-07
TCGA-LN-A7HY-01A-12D-A351-09	227	223	4	170	1.762115e-02	coding only	1	28836904	...	52	162	222	1.803245e-06	5.617801e-06	7.698469e-06	-5.113596e+00	...	4	28780707	...	1.389820e-07
TCGA-LN-A7HZ-01A-31D-A351-09	115	114	1	85	8.695652e-03	coding only	1	28836904	...	27	77	112	9.363002e-07	2.670190e-06	3.883912e-06	-5.410731e+00	...	6	28780707	...	2.084730e-07
TCGA-LN-A8HZ-01A-11D-A36J-09	229	226	3	176	1.310044e-02	coding only	1	28836904	...	50	154	226	1.733889e-06	5.340379e-06	7.837180e-06	-5.105840e+00	...	19	28780707	...	6.601645e-07
TCGA-LN-A8I0-01A-11D-A36J-09	235	229	6	179	2.553191e-02	coding only	1	28836904	...	49	159	232	1.699212e-06	5.513768e-06	8.045246e-06	-5.094461e+00	...	18	28780707	...	6.254190e-07
TCGA-LN-A8I1-01A-11D-A36J-09	223	219	4	176	1.793722e-02	coding only	1	28836904	...	42	159	219	1.456467e-06	5.513768e-06	7.594435e-06	-5.119505e+00	...	14	28780707	...	4.864370e-07
TCGA-LN-A9FO-01A-11D-A387-09	194	191	3	144	1.546392e-02	coding only	1	28836904	...	45	131	190	1.560500e-06	4.542790e-06	6.588779e-06	-5.181195e+00	...	11	28780707	...	3.822005e-07
TCGA-LN-A9FP-01A-31D-A387-09	543	530	13	409	2.394107e-02	coding only	1	28836904	...	119	394	530	4.126657e-06	1.366305e-05	1.837923e-05	-4.735673e+00	...	5	28780707	...	1.737275e-07
TCGA-LN-A9FQ-01A-31D-A387-09	196	194	2	150	1.020408e-02	coding only	1	28836904	...	43	140	195	1.491145e-06	4.854890e-06	6.762168e-06	-5.169914e+00	...	9	28780707	...	3.127095e-07
TCGA-LN-A9FR-01A-11D-A387-09	169	165	4	140	2.366864e-02	coding only	1	28836904	...	25	113	168	8.669447e-07	3.918590e-06	5.825868e-06	-5.234639e+00	...	26	28780707	...	9.033830e-07
TCGA-M9-A5M8-01A-11D-A28B-09	104	101	3	78	2.884615e-02	coding only	1	28836904	...	23	68	103	7.975891e-07	2.358089e-06	3.571812e-06	-5.447111e+00	...	9	28780707	...	3.127095e-07
TCGA-MX-A5UG-01A-21D-A31L-08	50	50	0	39	0	coding only	1	28836904	...	11	38	50	3.814557e-07	1.317756e-06	1.733889e-06	-5.760979e+00	...	1	28780707	...	3.474550e-08
TCGA-MX-A5UJ-01A-11D-A31L-08	1768	1737	31	1344	1.753394e-02	coding only	1	28836904	...	393	992	1768	1.362837e-05	3.440036e-05	6.131033e-05	-4.212466e+00	...	352	28780707	...	1.223042e-05
TCGA-MX-A663-01A-11D-A31L-08	95	94	1	79	1.052632e-02	coding only	1	28836904	...	15	76	95	5.201668e-07	2.635512e-06	3.294390e-06	-5.482225e+00	...	3	28780707	...	1.042365e-07
TCGA-MX-A666-01A-11D-A31L-08	132	131	1	102	7.575758e-03	coding only	1	28836904	...	29	92	132	1.005656e-06	3.190356e-06	4.577468e-06	-5.339375e+00	...	10	28780707	...	3.474550e-07
TCGA-Q9-A6FU-01A-11D-A31U-09	245	238	7	191	2.857143e-02	coding only	1	28836904	...	46	182	244	1.595178e-06	6.311357e-06	8.461380e-06	-5.072559e+00	...	9	28780707	...	3.127095e-07
TCGA-Q9-A6FW-01A-31D-A31U-09	285	283	2	224	7.017544e-03	coding only	1	28836904	...	58	204	280	2.011312e-06	7.074268e-06	9.709780e-06	-5.012791e+00	...	16	28780707	...	5.559280e-07
TCGA-R5-A7O7-01A-11D-A33T-08	154	148	6	113	3.896104e-02	exome+100bp flanks	2	35888610	...	35	105	154	9.752398e-07	2.925719e-06	4.291055e-06	-5.367436e+00	...	8	32165001	...	2.487175e-07
TCGA-R5-A7ZE-01B-11D-A34U-08	157	157	0	116	0	coding only	1	28836904	...	40	108	156	1.387111e-06	3.745201e-06	5.409735e-06	-5.266824e+00	...	8	28780707	...	2.779640e-07
TCGA-R5-A7ZF-01A-11D-A34U-08	60	60	0	46	0	coding only	1	28836904	...	14	42	60	4.854890e-07	1.456467e-06	2.080667e-06	-5.681797e+00	...	4	28780707	...	1.389820e-07
TCGA-R5-A7ZI-01A-11D-A34U-08	923	907	16	714	1.733478e-02	coding only	1	28836904	...	193	540	923	6.692813e-06	1.872600e-05	3.200760e-05	-4.494747e+00	...	173	28780707	...	6.010971e-06
TCGA-R5-A7ZR-01A-11D-A34U-08	80	80	0	61	0	coding only	1	28836904	...	19	55	80	6.588779e-07	1.907278e-06	2.774223e-06	-5.556859e+00	...	6	28780707	...	2.084730e-07
TCGA-R5-A804-01A-11D-A364-08	88	87	1	65	1.136364e-02	coding only	1	28836904	...	22	58	88	7.629113e-07	2.011312e-06	3.051645e-06	-5.515466e+00	...	7	28780707	...	2.432185e-07
TCGA-R5-A805-01A-11D-A364-08	135	132	3	105	2.222222e-02	coding only	1	28836904	...	27	103	135	9.363002e-07	3.571812e-06	4.681501e-06	-5.329615e+00	...	2	28780707	...	6.949100e-08
TCGA-R6-A6DN-01B-11D-A31U-09	180	178	2	143	1.111111e-02	coding only	1	28836904	...	34	123	176	1.179045e-06	4.265368e-06	6.103290e-06	-5.214436e+00	...	17	28780707	...	5.906735e-07
TCGA-R6-A6DQ-01B-11D-A31U-09	163	161	2	122	1.226994e-02	coding only	1	28836904	...	38	118	160	1.317756e-06	4.091979e-06	5.548446e-06	-5.255829e+00	...	2	28780707	...	6.949100e-08
TCGA-R6-A6KZ-01A-11D-A31U-09	232	228	4	178	1.724138e-02	coding only	1	28836904	...	49	177	230	1.699212e-06	6.137968e-06	7.975891e-06	-5.098221e+00	...	0	28780707	...	0
TCGA-R6-A6L4-01A-11D-A31U-09	170	167	3	134	1.764706e-02	coding only	1	28836904	...	33	130	168	1.144367e-06	4.508112e-06	5.825868e-06	-5.234639e+00	...	2	28780707	...	6.949100e-08
TCGA-R6-A6L6-01B-11D-A33E-09	231	228	3	188	1.298701e-02	coding only	1	28836904	...	40	177	227	1.387111e-06	6.137968e-06	7.871858e-06	-5.103923e+00	...	8	28780707	...	2.779640e-07
TCGA-R6-A6XG-01B-11D-A33E-09	392	386	6	308	1.530612e-02	coding only	1	28836904	...	78	286	382	2.704867e-06	9.917847e-06	1.324691e-05	-4.877885e+00	...	13	28780707	...	4.516915e-07
TCGA-R6-A6XQ-01B-11D-A33E-09	264	257	7	206	2.651515e-02	coding only	1	28836904	...	48	186	257	1.664534e-06	6.450068e-06	8.912191e-06	-5.050016e+00	...	16	28780707	...	5.559280e-07
TCGA-R6-A6Y0-01B-11D-A33E-09	324	314	10	255	3.086420e-02	exome+100bp flanks	2	35888610	...	57	238	313	1.588248e-06	6.631630e-06	8.721430e-06	-5.059412e+00	...	8	32165001	...	2.487175e-07
TCGA-R6-A6Y2-01B-11D-A33E-09	304	293	11	235	3.618421e-02	exome+100bp flanks	2	35888610	...	56	218	300	1.560384e-06	6.074351e-06	8.359198e-06	-5.077835e+00	...	15	32165001	...	4.663454e-07
TCGA-R6-A8W5-01B-11D-A37C-09	199	196	3	148	1.507538e-02	coding only	1	28836904	...	47	139	196	1.629856e-06	4.820212e-06	6.796846e-06	-5.167693e+00	...	7	28780707	...	2.432185e-07
TCGA-R6-A8W8-01B-11D-A37C-09	256	250	6	188	2.343750e-02	coding only	1	28836904	...	62	177	252	2.150023e-06	6.137968e-06	8.738802e-06	-5.058548e+00	...	8	28780707	...	2.779640e-07
TCGA-R6-A8WC-01A-11D-A37C-09	265	261	4	197	1.509434e-02	coding only	1	28836904	...	64	172	262	2.219378e-06	5.964579e-06	9.085580e-06	-5.041647e+00	...	22	28780707	...	7.644010e-07
TCGA-R6-A8WG-01A-11D-A37C-09	244	235	9	179	3.688525e-02	exome+100bp flanks	2	35888610	...	54	167	240	1.504656e-06	4.653287e-06	6.687358e-06	-5.174745e+00	...	10	32165001	...	3.108969e-07
TCGA-RD-A7BS-01A-11D-A32N-08	68	66	2	44	2.941176e-02	coding only	1	28836904	...	22	42	68	7.629113e-07	1.456467e-06	2.358089e-06	-5.627440e+00	...	2	28780707	...	6.949100e-08
TCGA-RD-A7BT-01A-11D-A33T-08	282	279	3	222	1.063830e-02	coding only	1	28836904	...	57	211	282	1.976634e-06	7.317013e-06	9.779136e-06	-5.009700e+00	...	11	28780707	...	3.822005e-07
TCGA-RD-A7BW-01A-11D-A32N-08	89	88	1	66	1.123596e-02	coding only	1	28836904	...	22	64	89	7.629113e-07	2.219378e-06	3.086323e-06	-5.510559e+00	...	2	28780707	...	6.949100e-08
TCGA-RD-A7C1-01A-11D-A32N-08	319	314	5	252	1.567398e-02	coding only	1	28836904	...	62	243	319	2.150023e-06	8.426702e-06	1.106221e-05	-4.956158e+00	...	9	28780707	...	3.127095e-07
TCGA-RD-A8MV-01A-11D-A364-08	77	77	0	69	0	coding only	1	28836904	...	8	60	77	2.774223e-07	2.080667e-06	2.670190e-06	-5.573458e+00	...	9	28780707	...	3.127095e-07
TCGA-RD-A8MW-01A-11D-A364-08	88	88	0	68	0	coding only	1	28836904	...	20	58	88	6.935557e-07	2.011312e-06	3.051645e-06	-5.515466e+00	...	10	28780707	...	3.474550e-07
TCGA-RD-A8N0-01A-12D-A364-08	8	7	1	6	1.250000e-01	coding only	1	28836904	...	1	5	8	3.467779e-08	1.733889e-07	2.774223e-07	-6.556859e+00	...	1	28780707	...	3.474550e-08
TCGA-RD-A8N1-01A-12D-A364-08	111	109	2	91	1.801802e-02	coding only	1	28836904	...	18	85	111	6.242002e-07	2.947612e-06	3.849234e-06	-5.414626e+00	...	6	28780707	...	2.084730e-07
TCGA-RD-A8N2-01A-12D-A364-08	6	6	0	4	0	coding only	1	28836904	...	2	2	6	6.935557e-08	6.935557e-08	2.080667e-07	-6.681797e+00	...	2	28780707	...	6.949100e-08
TCGA-RD-A8N4-01A-21D-A364-08	5	5	0	4	0	coding only	1	28836904	...	1	2	5	3.467779e-08	6.935557e-08	1.733889e-07	-6.760979e+00	...	2	28780707	...	6.949100e-08
TCGA-RD-A8N5-01A-12D-A364-08	38	38	0	28	0	coding only	1	28836904	...	10	26	38	3.467779e-07	9.016224e-07	1.317756e-06	-5.880165e+00	...	2	28780707	...	6.949100e-08
TCGA-RD-A8N6-01A-11D-A364-08	164	164	0	124	0	coding only	1	28836904	...	40	113	164	1.387111e-06	3.918590e-06	5.687157e-06	-5.245105e+00	...	11	28780707	...	3.822005e-07
TCGA-RD-A8N9-01A-12D-A397-08	147	146	1	101	6.802721e-03	coding only	1	28836904	...	44	94	146	1.525823e-06	3.259712e-06	5.062957e-06	-5.295596e+00	...	7	28780707	...	2.432185e-07
TCGA-RE-A7BO-01A-11D-A33E-09	370	362	8	280	2.162162e-02	coding only	1	28836904	...	82	266	363	2.843578e-06	9.224291e-06	1.258804e-05	-4.900042e+00	...	7	28780707	...	2.432185e-07
TCGA-S8-A6BV-01A-21D-A31U-09	225	222	3	180	1.333333e-02	coding only	1	28836904	...	42	164	222	1.456467e-06	5.687157e-06	7.698469e-06	-5.113596e+00	...	13	28780707	...	4.516915e-07
TCGA-S8-A6BW-01A-11D-A31U-09	204	199	5	156	2.450980e-02	coding only	1	28836904	...	40	139	198	1.387111e-06	4.820212e-06	6.866202e-06	-5.163283e+00	...	14	28780707	...	4.864370e-07
TCGA-SW-A7EA-01A-12D-A34U-08	683	667	16	525	2.342606e-02	coding only	1	28836904	...	142	385	683	4.924246e-06	1.335095e-05	2.368493e-05	-4.625528e+00	...	140	28780707	...	4.864370e-06
TCGA-SW-A7EB-01A-11D-A34U-08	142	141	1	116	7.042254e-03	coding only	1	28836904	...	25	111	142	8.669447e-07	3.849234e-06	4.924246e-06	-5.307660e+00	...	5	28780707	...	1.737275e-07
TCGA-V5-A7RB-01A-11D-A351-09	276	271	5	227	1.811594e-02	coding only	1	28836904	...	43	215	271	1.491145e-06	7.455724e-06	9.397680e-06	-5.026979e+00	...	8	28780707	...	2.779640e-07
TCGA-V5-A7RC-01B-11D-A403-09	202	196	6	158	2.970297e-02	coding only	1	28836904	...	38	139	198	1.317756e-06	4.820212e-06	6.866202e-06	-5.163283e+00	...	15	28780707	...	5.211825e-07
TCGA-V5-A7RE-01A-11D-A351-09	226	215	11	160	4.867257e-02	exome+100bp flanks	2	35888610	...	50	140	215	1.393200e-06	3.900959e-06	5.990759e-06	-5.222518e+00	...	14	32165001	...	4.352557e-07
TCGA-V5-AASV-01A-11D-A387-09	210	208	2	165	9.523810e-03	coding only	1	28836904	...	43	123	205	1.491145e-06	4.265368e-06	7.108946e-06	-5.148195e+00	...	37	28780707	...	1.285583e-06
TCGA-V5-AASW-01A-11D-A403-09	225	222	3	163	1.333333e-02	coding only	1	28836904	...	58	147	219	2.011312e-06	5.097635e-06	7.594435e-06	-5.119505e+00	...	12	28780707	...	4.169460e-07
TCGA-V5-AASX-01A-11D-A387-09	428	422	6	315	1.401869e-02	coding only	1	28836904	...	106	299	421	3.675845e-06	1.036866e-05	1.459935e-05	-4.835667e+00	...	10	28780707	...	3.474550e-07
TCGA-VQ-A8DL-01A-11D-A364-08	157	155	2	140	1.273885e-02	coding only	1	28836904	...	15	42	157	5.201668e-07	1.456467e-06	5.444412e-06	-5.264049e+00	...	98	28780707	...	3.405059e-06
TCGA-VQ-A8DT-01A-11D-A364-08	188	185	3	155	1.595745e-02	coding only	1	28836904	...	30	142	187	1.040334e-06	4.924246e-06	6.484746e-06	-5.188107e+00	...	12	28780707	...	4.169460e-07
TCGA-VQ-A8DU-01A-11D-A364-08	159	157	2	128	1.257862e-02	coding only	1	28836904	...	29	120	159	1.005656e-06	4.161334e-06	5.513768e-06	-5.258552e+00	...	8	28780707	...	2.779640e-07
TCGA-VQ-A8DV-01A-12D-A364-08	76	76	0	61	0	coding only	1	28836904	...	15	52	76	5.201668e-07	1.803245e-06	2.635512e-06	-5.579135e+00	...	9	28780707	...	3.127095e-07
TCGA-VQ-A8DZ-01A-11D-A364-08	86	85	1	70	1.162791e-02	coding only	1	28836904	...	15	64	86	5.201668e-07	2.219378e-06	2.982290e-06	-5.525450e+00	...	6	28780707	...	2.084730e-07
TCGA-VQ-A8E2-01A-11D-A364-08	120	120	0	97	0	coding only	1	28836904	...	23	91	120	7.975891e-07	3.155679e-06	4.161334e-06	-5.380767e+00	...	6	28780707	...	2.084730e-07
TCGA-VQ-A8E7-01B-11D-A410-08	109	106	3	73	2.752294e-02	coding only	1	28836904	...	33	68	109	1.144367e-06	2.358089e-06	3.779879e-06	-5.422522e+00	...	5	28780707	...	1.737275e-07
TCGA-VQ-A8P2-01A-11D-A364-08	8139	8009	130	6065	1.597248e-02	coding only	1	28836904	...	1943	5641	8137	6.737894e-05	1.956174e-04	2.821731e-04	-3.549484e+00	...	423	28780707	...	1.469735e-05
TCGA-VQ-A8P3-01A-11D-A364-08	303	299	4	239	1.320132e-02	coding only	1	28836904	...	60	223	303	2.080667e-06	7.733146e-06	1.050737e-05	-4.978506e+00	...	16	28780707	...	5.559280e-07
TCGA-VQ-A8PE-01A-11D-A410-08	144	141	3	107	2.083333e-02	coding only	1	28836904	...	34	97	143	1.179045e-06	3.363745e-06	4.958923e-06	-5.304613e+00	...	9	28780707	...	3.127095e-07
TCGA-VQ-A8PK-01A-12D-A410-08	96	95	1	77	1.041667e-02	coding only	1	28836904	...	18	70	96	6.242002e-07	2.427445e-06	3.329068e-06	-5.477677e+00	...	7	28780707	...	2.432185e-07
TCGA-VQ-A8PM-01A-21D-A410-08	61	61	0	44	0	coding only	1	28836904	...	17	37	61	5.895224e-07	1.283078e-06	2.115345e-06	-5.674619e+00	...	7	28780707	...	2.432185e-07
TCGA-VQ-A8PQ-01A-11D-A410-08	22	21	1	16	4.545455e-02	coding only	1	28836904	...	5	13	22	1.733889e-07	4.508112e-07	7.629113e-07	-6.117526e+00	...	3	28780707	...	1.042365e-07
TCGA-VQ-A91Q-01A-12D-A410-08	112	110	2	86	1.785714e-02	coding only	1	28836904	...	24	79	112	8.322669e-07	2.739545e-06	3.883912e-06	-5.410731e+00	...	7	28780707	...	2.432185e-07
TCGA-VQ-A91U-01A-11D-A410-08	159	157	2	118	1.257862e-02	coding only	1	28836904	...	39	114	159	1.352434e-06	3.953268e-06	5.513768e-06	-5.258552e+00	...	4	28780707	...	1.389820e-07
TCGA-VQ-A91V-01A-11D-A410-08	259	258	1	209	3.861004e-03	coding only	1	28836904	...	49	196	259	1.699212e-06	6.796846e-06	8.981547e-06	-5.046649e+00	...	13	28780707	...	4.516915e-07
TCGA-VQ-A92D-01A-11D-A410-08	146	144	2	107	1.369863e-02	coding only	1	28836904	...	37	94	146	1.283078e-06	3.259712e-06	5.062957e-06	-5.295596e+00	...	13	28780707	...	4.516915e-07
TCGA-VQ-A94T-01A-11D-A410-08	88	88	0	64	0	coding only	1	28836904	...	24	58	88	8.322669e-07	2.011312e-06	3.051645e-06	-5.515466e+00	...	6	28780707	...	2.084730e-07
TCGA-VQ-AA64-01A-11D-A410-08	285	277	8	214	2.807018e-02	coding only	1	28836904	...	63	189	285	2.184701e-06	6.554102e-06	9.883169e-06	-5.005104e+00	...	25	28780707	...	8.686375e-07
TCGA-VQ-AA68-01A-11D-A410-08	178	175	3	143	1.685393e-02	coding only	1	28836904	...	32	132	178	1.109689e-06	4.577468e-06	6.172646e-06	-5.209529e+00	...	11	28780707	...	3.822005e-07
TCGA-VQ-AA69-01A-11D-A410-08	71	70	1	53	1.408451e-02	coding only	1	28836904	...	17	47	71	5.895224e-07	1.629856e-06	2.462123e-06	-5.608690e+00	...	6	28780707	...	2.084730e-07
TCGA-VQ-AA6A-01A-11D-A410-08	105	102	3	76	2.857143e-02	coding only	1	28836904	...	26	70	105	9.016224e-07	2.427445e-06	3.641168e-06	-5.438759e+00	...	6	28780707	...	2.084730e-07
TCGA-VQ-AA6B-01A-11D-A410-08	88	88	0	75	0	coding only	1	28836904	...	13	67	88	4.508112e-07	2.323412e-06	3.051645e-06	-5.515466e+00	...	8	28780707	...	2.779640e-07
TCGA-VQ-AA6F-01A-31D-A410-08	54	52	2	44	3.703704e-02	coding only	1	28836904	...	8	39	54	2.774223e-07	1.352434e-06	1.872600e-06	-5.727555e+00	...	5	28780707	...	1.737275e-07
TCGA-VQ-AA6G-01A-11D-A410-08	136	135	1	107	7.352941e-03	coding only	1	28836904	...	28	99	136	9.709780e-07	3.433101e-06	4.716179e-06	-5.326410e+00	...	8	28780707	...	2.779640e-07
TCGA-VQ-AA6I-01A-11D-A410-08	114	113	1	87	8.771930e-03	coding only	1	28836904	...	26	71	114	9.016224e-07	2.462123e-06	3.953268e-06	-5.403044e+00	...	16	28780707	...	5.559280e-07
TCGA-VQ-AA6J-01A-11D-A410-08	147	146	1	107	6.802721e-03	coding only	1	28836904	...	39	97	147	1.352434e-06	3.363745e-06	5.097635e-06	-5.292631e+00	...	10	28780707	...	3.474550e-07
TCGA-VQ-AA6K-01A-11D-A410-08	84	84	0	71	0	coding only	1	28836904	...	13	58	84	4.508112e-07	2.011312e-06	2.912934e-06	-5.535669e+00	...	13	28780707	...	4.516915e-07
TCGA-VR-A8EO-01A-11D-A36J-09	158	152	6	124	3.797468e-02	exome+100bp flanks	2	35888610	...	27	113	156	7.523278e-07	3.148631e-06	4.346783e-06	-5.361832e+00	...	10	32165001	...	3.108969e-07
TCGA-VR-A8EP-01A-31D-A403-09	132	130	2	109	1.515152e-02	coding only	1	28836904	...	21	101	131	7.282335e-07	3.502456e-06	4.542790e-06	-5.342677e+00	...	7	28780707	...	2.432185e-07
TCGA-VR-A8EQ-01A-11D-A36J-09	351	348	3	269	8.547009e-03	coding only	1	28836904	...	78	241	342	2.704867e-06	8.357347e-06	1.185980e-05	-4.925923e+00	...	20	28780707	...	6.949100e-07
TCGA-VR-A8ER-01A-11D-A36J-09	162	160	2	137	1.234568e-02	coding only	1	28836904	...	23	132	161	7.975891e-07	4.577468e-06	5.583124e-06	-5.253123e+00	...	4	28780707	...	1.389820e-07
TCGA-VR-A8ET-01A-11D-A403-09	62	60	2	49	3.225806e-02	coding only	1	28836904	...	11	40	60	3.814557e-07	1.387111e-06	2.080667e-06	-5.681797e+00	...	7	28780707	...	2.432185e-07
TCGA-VR-A8EU-01A-11D-A36J-09	240	235	5	181	2.083333e-02	coding only	1	28836904	...	53	163	238	1.837923e-06	5.652479e-06	8.253313e-06	-5.083372e+00	...	17	28780707	...	5.906735e-07
TCGA-VR-A8EW-01A-11D-A36J-09	185	182	3	141	1.621622e-02	coding only	1	28836904	...	40	137	182	1.387111e-06	4.750857e-06	6.311357e-06	-5.199877e+00	...	2	28780707	...	6.949100e-08
TCGA-VR-A8EX-01A-11D-A36J-09	293	289	4	231	1.365188e-02	coding only	1	28836904	...	58	223	290	2.011312e-06	7.733146e-06	1.005656e-05	-4.997551e+00	...	6	28780707	...	2.084730e-07
TCGA-VR-A8EY-01A-11D-A36J-09	194	189	5	155	2.577320e-02	coding only	1	28836904	...	33	143	193	1.144367e-06	4.958923e-06	6.692813e-06	-5.174391e+00	...	12	28780707	...	4.169460e-07
TCGA-VR-A8EZ-01A-11D-A36J-09	307	299	8	235	2.605863e-02	coding only	1	28836904	...	64	223	302	2.219378e-06	7.733146e-06	1.047269e-05	-4.979942e+00	...	7	28780707	...	2.432185e-07
TCGA-VR-A8Q7-01A-11D-A37C-09	180	176	4	141	2.222222e-02	coding only	1	28836904	...	33	122	171	1.144367e-06	4.230690e-06	5.929901e-06	-5.226953e+00	...	12	28780707	...	4.169460e-07
TCGA-VR-AA4D-01A-11D-A37C-09	194	189	5	152	2.577320e-02	coding only	1	28836904	...	37	136	190	1.283078e-06	4.716179e-06	6.588779e-06	-5.181195e+00	...	13	28780707	...	4.516915e-07
TCGA-VR-AA4G-01A-11D-A37C-09	191	188	3	148	1.570681e-02	coding only	1	28836904	...	39	140	190	1.352434e-06	4.854890e-06	6.588779e-06	-5.181195e+00	...	8	28780707	...	2.779640e-07
TCGA-VR-AA7B-01A-31D-A403-09	239	235	4	189	1.673640e-02	coding only	1	28836904	...	46	176	234	1.595178e-06	6.103290e-06	8.114602e-06	-5.090733e+00	...	8	28780707	...	2.779640e-07
TCGA-VR-AA7D-01A-11D-A403-09	146	145	1	109	6.849315e-03	coding only	1	28836904	...	36	103	146	1.248400e-06	3.571812e-06	5.062957e-06	-5.295596e+00	...	6	28780707	...	2.084730e-07
TCGA-VR-AA7I-01A-11D-A403-09	106	105	1	84	9.433962e-03	coding only	1	28836904	...	21	78	105	7.282335e-07	2.704867e-06	3.641168e-06	-5.438759e+00	...	5	28780707	...	1.737275e-07
TCGA-X8-AAAR-01A-11D-A403-09	199	196	3	147	1.507538e-02	coding only	1	28836904	...	48	134	194	1.664534e-06	4.646823e-06	6.727491e-06	-5.172147e+00	...	9	28780707	...	3.127095e-07
TCGA-XP-A8T6-01A-11D-A36J-09	235	228	7	167	2.978723e-02	coding only	1	28836904	...	59	158	232	2.045989e-06	5.479090e-06	8.045246e-06	-5.094461e+00	...	9	28780707	...	3.127095e-07
TCGA-XP-A8T7-01A-11D-A36J-09	229	226	3	181	1.310044e-02	coding only	1	28836904	...	44	164	224	1.525823e-06	5.687157e-06	7.767824e-06	-5.109701e+00	...	13	28780707	...	4.516915e-07
TCGA-XP-A8T8-01A-11D-A36J-09	242	240	2	195	8.264463e-03	coding only	1	28836904	...	45	179	241	1.560500e-06	6.207324e-06	8.357347e-06	-5.077932e+00	...	15	28780707	...	5.211825e-07
TCGA-Z6-A8JD-01A-11D-A36J-09	282	275	7	218	2.482270e-02	coding only	1	28836904	...	54	205	276	1.872600e-06	7.108946e-06	9.571069e-06	-5.019040e+00	...	10	28780707	...	3.474550e-07
TCGA-Z6-A8JE-01A-11D-A37C-09	289	287	2	239	6.920415e-03	coding only	1	28836904	...	48	230	286	1.664534e-06	7.975891e-06	9.917847e-06	-5.003583e+00	...	6	28780707	...	2.084730e-07
TCGA-Z6-A9VB-01A-21D-A37C-09	216	214	2	165	9.259259e-03	coding only	1	28836904	...	49	147	215	1.699212e-06	5.097635e-06	7.455724e-06	-5.127510e+00	...	17	28780707	...	5.906735e-07
TCGA-Z6-AAPN-01A-11D-A403-09	442	437	5	354	1.131222e-02	coding only	1	28836904	...	83	343	437	2.878256e-06	1.189448e-05	1.515419e-05	-4.819467e+00	...	6	28780707	...	2.084730e-07
TCGA-ZA-A8F6-01A-23D-A364-08	46	46	0	39	0	coding only	1	28836904	...	7	34	46	2.427445e-07	1.179045e-06	1.595178e-06	-5.797191e+00	...	5	28780707	...	1.737275e-07
TCGA-ZR-A9CJ-01B-11D-A387-09	218	214	4	169	1.834862e-02	coding only	1	28836904	...	44	154	212	1.525823e-06	5.340379e-06	7.351691e-06	-5.133613e+00	...	10	28780707	...	3.474550e-07
