Clinical Features	Time to Death		YEARS_TO_BIRTH		PATHOLOGIC_STAGE		PATHOLOGY_T_STAGE		PATHOLOGY_N_STAGE		PATHOLOGY_M_STAGE		GENDER		RADIATION_THERAPY		HISTOLOGICAL_TYPE		RESIDUAL_TUMOR		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_1q21.3	271 (73%)	99	0.04058	0.43	0.94323	1	0.57462	0.876	0.82255	1	0.16289	0.663	0.57516	0.876	0.61441	0.885	0.69917	0.93	0.01143	0.231	0.43016	0.822	0.2169	0.67	1	1
amp_1q42.2	268 (72%)	102	0.47985	0.847	0.97977	1	0.19042	0.67	0.59596	0.877	1	1	0.57516	0.876	0.61773	0.885	0.70579	0.936	0.51003	0.849	0.85745	1	0.31141	0.749	0.77655	0.968
amp_2p24.1	65 (18%)	305	0.048452	0.476	0.091459	0.555	0.21955	0.67	0.15126	0.651	0.076799	0.533	0.13064	0.617	0.0018749	0.0988	1	1	0.64063	0.885	0.51301	0.849	0.15637	0.659	1	1
amp_2q33.1	64 (17%)	306	0.16163	0.661	0.69483	0.926	0.054129	0.49	0.071709	0.528	0.47895	0.847	0.16834	0.669	0.00010885	0.0193	0.36585	0.778	0.63357	0.885	0.62631	0.885	0.27631	0.742	0.49498	0.848
amp_3q26.31	77 (21%)	293	0.35587	0.778	0.41028	0.814	0.834	1	0.73747	0.952	0.47133	0.844	0.58695	0.876	0.78361	0.973	1	1	0.82227	1	0.58548	0.876	0.20428	0.67	0.345	0.778
amp_4p14	54 (15%)	316	0.21367	0.67	0.043142	0.445	0.55951	0.875	0.25731	0.714	1	1	1	1	0.26886	0.729	1	1	1	1	0.54757	0.875	0.86808	1	0.71841	0.946
amp_5p15.33	163 (44%)	207	0.068733	0.528	0.55821	0.875	0.16913	0.669	0.04423	0.447	0.25948	0.717	0.63154	0.885	0.73618	0.952	0.19299	0.67	0.44313	0.828	0.90928	1	0.21911	0.67	0.79759	0.981
amp_5q35.3	135 (36%)	235	0.38565	0.796	0.11341	0.606	0.4692	0.843	0.69272	0.925	0.55483	0.875	0.63142	0.885	0.24937	0.702	0.29874	0.749	0.10501	0.601	0.12311	0.611	0.48696	0.847	1	1
amp_6p25.2	159 (43%)	211	0.13303	0.624	0.98287	1	0.11726	0.606	0.083559	0.538	1	1	0.31737	0.749	0.36788	0.78	0.31066	0.749	0.44259	0.828	0.72351	0.946	0.91433	1	0.12329	0.611
amp_6p21.1	158 (43%)	212	0.36491	0.778	0.092814	0.557	0.40227	0.812	0.40965	0.814	0.26623	0.728	0.31547	0.749	0.091779	0.555	0.085026	0.538	0.30062	0.749	0.72138	0.946	0.88043	1	0.29951	0.749
amp_6q12	109 (29%)	261	0.40658	0.814	0.6372	0.885	0.01775	0.286	0.055889	0.49	0.19518	0.67	0.58296	0.876	0.32829	0.762	0.066656	0.524	0.14229	0.644	0.33704	0.777	0.45528	0.832	0.25547	0.712
amp_6q12	83 (22%)	287	0.28103	0.745	0.31251	0.749	0.39941	0.81	0.14793	0.65	1	1	0.2029	0.67	0.35196	0.778	0.21359	0.67	0.29432	0.749	0.39246	0.8	0.30202	0.749	0.056036	0.49
amp_7q31.2	120 (32%)	250	0.98875	1	0.081938	0.538	0.37028	0.78	0.542	0.875	0.23445	0.692	1	1	0.47577	0.847	0.48021	0.847	0.41234	0.814	0.76221	0.962	0.14285	0.644	0.41406	0.814
amp_8q24.21	231 (62%)	139	0.65108	0.888	0.12849	0.615	0.02815	0.344	0.59241	0.876	0.03286	0.375	0.60052	0.878	0.00021067	0.0249	0.49199	0.848	0.75005	0.955	0.56282	0.875	2e-05	0.00708	0.11694	0.606
amp_9q34.2	47 (13%)	323	0.61942	0.885	0.39332	0.8	0.1802	0.67	0.03766	0.423	1	1	0.43778	0.827	0.73961	0.952	1	1	1	1	0.15809	0.66	0.63551	0.885	0.44291	0.828
amp_11q13.3	57 (15%)	313	0.74844	0.955	0.41406	0.814	0.20807	0.67	0.10076	0.585	1	1	0.51126	0.849	0.64322	0.885	0.36572	0.778	0.7622	0.962	0.057529	0.491	0.89505	1	0.48326	0.847
amp_12q14.1	56 (15%)	314	0.50802	0.849	0.36058	0.778	0.19216	0.67	0.076049	0.533	0.36533	0.778	1	1	0.35193	0.778	0.36501	0.778	0.00253	0.112	0.84118	1	0.20962	0.67	1	1
amp_13q32.3	67 (18%)	303	0.11543	0.606	0.34523	0.778	0.56739	0.875	0.50993	0.849	0.44801	0.828	0.57729	0.876	0.030406	0.365	0.2051	0.67	0.19172	0.67	0.40973	0.814	0.7764	0.968	1	1
amp_13q34	68 (18%)	302	0.16569	0.667	0.38891	0.798	0.90203	1	0.96278	1	0.44801	0.828	0.56942	0.876	0.14962	0.65	0.21962	0.67	0.19762	0.67	0.75777	0.96	0.27241	0.736	1	1
amp_15q26.3	54 (15%)	316	0.94604	1	0.048206	0.476	0.48267	0.847	0.2318	0.69	1	1	0.4936	0.848	0.42988	0.822	1	1	0.54908	0.875	0.70451	0.936	0.84301	1	0.061312	0.505
amp_17p11.2	46 (12%)	324	0.6021	0.879	0.36111	0.778	0.01237	0.237	0.00486	0.15	1	1	0.44739	0.828	0.8675	1	0.60627	0.88	1	1	0.01939	0.291	0.64656	0.887	0.42092	0.816
amp_17q25.3	145 (39%)	225	0.23646	0.694	0.73854	0.952	0.0088199	0.203	0.0033	0.124	1	1	1	1	0.11011	0.606	0.49119	0.848	0.45181	0.832	0.051569	0.48	0.23011	0.69	0.29918	0.749
amp_19p13.12	69 (19%)	301	0.37243	0.78	0.62781	0.885	0.20715	0.67	0.85605	1	1	1	0.020976	0.291	0.0062111	0.176	1	1	0.20254	0.67	0.21839	0.67	0.33513	0.775	0.51453	0.849
amp_19q13.11	91 (25%)	279	0.66895	0.905	0.29173	0.749	0.075489	0.533	0.37686	0.787	1	1	0.040711	0.43	0.19843	0.67	1	1	0.46099	0.833	0.088939	0.548	0.20631	0.67	0.55676	0.875
amp_20q13.13	124 (34%)	246	0.050842	0.48	0.03104	0.366	0.11077	0.606	0.082189	0.538	0.26012	0.717	0.61483	0.885	0.15601	0.659	0.72337	0.946	1	1	0.21681	0.67	0.53682	0.874	0.7867	0.975
amp_xq28	87 (24%)	283	0.34986	0.778	0.19081	0.67	0.97982	1	0.93087	1	1	1	0.57752	0.876	0.00061985	0.0549	1	1	1	1	1	1	0.56485	0.875	0.37853	0.788
del_1p36.31	162 (44%)	208	0.52881	0.869	0.47804	0.847	0.91086	1	0.72834	0.946	1	1	0.34201	0.778	0.17746	0.67	0.083428	0.538	0.13768	0.633	0.17125	0.67	0.070769	0.528	0.31426	0.749
del_1p36.11	142 (38%)	228	0.9491	1	0.90984	1	0.54467	0.875	0.52791	0.869	0.56603	0.875	0.31367	0.749	0.7313	0.948	1	1	0.2776	0.742	0.15302	0.653	0.11418	0.606	0.29826	0.749
del_2q22.1	52 (14%)	318	0.13737	0.633	0.14803	0.65	0.6499	0.888	1	1	0.35664	0.778	1	1	1	1	0.36033	0.778	0.53419	0.873	0.30246	0.749	0.53524	0.873	1	1
del_2q37.3	62 (17%)	308	0.54778	0.875	0.066428	0.524	0.41595	0.814	0.43433	0.827	0.064066	0.515	1	1	0.76557	0.964	1	1	0.088689	0.548	0.45772	0.833	0.19424	0.67	0.72132	0.946
del_3p13	73 (20%)	297	0.59127	0.876	0.13724	0.633	0.00125	0.0805	0.00332	0.124	0.097696	0.576	0.17396	0.67	0.017294	0.285	0.21673	0.67	0.00299	0.124	1	1	0.60683	0.88	0.74658	0.954
del_4p16.3	85 (23%)	285	0.20413	0.67	0.43565	0.827	0.34571	0.778	0.59025	0.876	0.54431	0.875	0.24533	0.698	0.0078415	0.192	1	1	0.84888	1	0.1936	0.67	0.03209	0.372	0.2193	0.67
del_4q21.3	171 (46%)	199	0.30115	0.749	0.00018719	0.0249	0.783	0.973	0.64215	0.885	1	1	0.62236	0.885	0.31674	0.749	1	1	0.39306	0.8	0.40279	0.812	0.00232	0.11	0.075061	0.533
del_4q24	173 (47%)	197	0.10739	0.603	0.001953	0.0988	0.67776	0.914	0.54733	0.875	1	1	0.62324	0.885	0.37256	0.78	1	1	0.34718	0.778	0.33831	0.777	0.01014	0.218	0.12159	0.611
del_4q35.1	172 (46%)	198	0.0060574	0.176	0.00058328	0.0549	0.48823	0.847	0.24148	0.698	1	1	0.62257	0.885	0.057191	0.491	0.51421	0.849	0.3486	0.778	0.21701	0.67	5e-05	0.0118	1	1
del_6q27	136 (37%)	234	0.92624	1	0.0012428	0.0805	0.44781	0.828	0.97257	1	0.55693	0.875	0.30515	0.749	0.2993	0.749	0.49624	0.848	0.38675	0.796	0.24334	0.698	0.50638	0.849	0.18414	0.67
del_8p23.2	247 (67%)	123	0.81451	0.999	0.05406	0.49	0.12937	0.615	0.41237	0.814	1	1	0.30375	0.749	0.4077	0.814	1	1	0.16084	0.661	0.90517	1	0.65256	0.888	1	1
del_8p12	242 (65%)	128	0.66965	0.905	0.20962	0.67	0.32499	0.762	0.6436	0.885	1	1	0.3009	0.749	0.63984	0.885	0.50417	0.849	0.43095	0.822	0.77622	0.968	0.61699	0.885	0.59203	0.876
del_9p21.3	150 (41%)	220	0.10014	0.585	0.079622	0.538	0.59844	0.878	0.55853	0.875	0.56751	0.875	1	1	0.42699	0.822	0.32677	0.762	1	1	0.20236	0.67	0.23358	0.692	0.071259	0.528
del_9q31.3	119 (32%)	251	0.22557	0.683	0.90279	1	0.068109	0.528	0.18158	0.67	0.026161	0.329	0.084963	0.538	0.90503	1	0.7253	0.946	1	1	0.17413	0.67	0.97567	1	0.28106	0.745
del_10q23.31	97 (26%)	273	0.24076	0.698	0.41819	0.815	0.24253	0.698	0.01831	0.288	1	1	0.57696	0.876	1	1	0.45389	0.832	0.085919	0.538	0.54927	0.875	0.0071699	0.188	1	1
del_10q26.13	105 (28%)	265	0.1125	0.606	0.79449	0.981	0.41905	0.815	0.03948	0.43	1	1	0.58055	0.876	0.71206	0.942	0.45575	0.832	0.20875	0.67	0.36383	0.778	0.02091	0.291	1	1
del_11q14.1	77 (21%)	293	0.48148	0.847	0.20463	0.67	0.12591	0.615	0.085509	0.538	0.12868	0.615	1	1	0.6827	0.918	1	1	0.04049	0.43	0.49845	0.848	0.49957	0.848	0.02523	0.325
del_11q25	94 (25%)	276	0.68878	0.924	0.38554	0.796	0.48926	0.847	0.65887	0.894	0.17647	0.67	1	1	1	1	0.45943	0.833	0.10696	0.603	0.72857	0.946	0.30071	0.749	0.24525	0.698
del_12p12.1	78 (21%)	292	0.33907	0.777	0.8727	1	0.01116	0.231	0.4718	0.844	0.0088707	0.203	0.21481	0.67	0.89151	1	0.21339	0.67	0.14659	0.65	0.070279	0.528	0.63599	0.885	1	1
del_12q24.33	59 (16%)	311	0.11408	0.606	0.29141	0.749	0.00385	0.13	0.23085	0.69	0.42401	0.82	0.1518	0.651	0.12829	0.615	1	1	0.5942	0.876	0.94634	1	0.383	0.795	0.72443	0.946
del_13q14.2	179 (48%)	191	0.02077	0.291	0.23731	0.694	0.28559	0.749	0.02283	0.305	0.62206	0.885	1	1	0.09396	0.559	0.74399	0.954	0.68317	0.918	0.4291	0.822	0.16014	0.661	0.61372	0.885
del_14q23.3	131 (35%)	239	0.24999	0.702	0.18584	0.67	0.46136	0.833	0.43774	0.827	0.55976	0.875	0.64044	0.885	0.4152	0.814	1	1	0.17463	0.67	0.79384	0.981	0.01952	0.291	0.59325	0.876
del_14q32.33	133 (36%)	237	0.75574	0.959	0.050685	0.48	0.17854	0.67	0.072339	0.528	0.55693	0.875	0.63438	0.885	1	1	0.49753	0.848	0.063319	0.515	0.86911	1	0.074949	0.533	0.79523	0.981
del_15q26.3	79 (21%)	291	0.021362	0.291	0.93795	1	0.085689	0.538	0.01975	0.291	0.12062	0.611	0.57507	0.876	0.89183	1	1	1	0.26756	0.729	0.76771	0.965	0.22385	0.68	1	1
del_16q23.1	162 (44%)	208	0.21834	0.67	0.0014808	0.0874	0.30909	0.749	0.14892	0.65	1	1	1	1	0.26116	0.717	0.30835	0.749	0.44144	0.828	0.85064	1	2e-05	0.00708	0.79815	0.981
del_17p13.1	226 (61%)	144	0.0078721	0.192	0.54246	0.875	0.061389	0.505	0.01491	0.257	0.28675	0.749	0.30015	0.749	0.64864	0.888	0.74334	0.954	0.87349	1	0.31545	0.749	0.25319	0.709	0.60684	0.88
del_17p11.2	195 (53%)	175	0.0041248	0.133	0.72562	0.946	0.0161	0.271	0.01358	0.249	0.249	0.702	0.62486	0.885	0.91117	1	1	1	0.58841	0.876	0.13883	0.634	0.95237	1	0.45276	0.832
del_18q21.2	94 (25%)	276	0.82067	1	0.82363	1	0.3277	0.762	0.93805	1	0.15845	0.66	0.27672	0.742	0.12637	0.615	0.22824	0.688	0.02428	0.318	0.50513	0.849	0.96446	1	0.56009	0.875
del_19p13.3	93 (25%)	277	0.12346	0.611	0.23966	0.698	0.35796	0.778	0.18459	0.67	1	1	1	1	0.3707	0.78	0.69235	0.925	0.59874	0.878	0.62703	0.885	0.02647	0.329	0.77049	0.967
del_20p12.1	29 (8%)	341	0.50065	0.848	0.3142	0.749	0.18315	0.67	0.65806	0.894	1	1	0.32358	0.761	0.53415	0.873	0.14954	0.65	0.17976	0.67	0.58613	0.876	0.16925	0.669	0.35301	0.778
del_22q12.1	79 (21%)	291	0.75408	0.959	0.16562	0.667	0.051529	0.48	0.01374	0.249	0.4865	0.847	1	1	0.34089	0.778	1	1	0.01175	0.231	0.077839	0.535	0.0068099	0.185	0.10523	0.601
del_22q13.32	83 (22%)	287	0.56509	0.875	0.2871	0.749	0.0096399	0.213	0.00381	0.13	0.12062	0.611	1	1	0.35196	0.778	1	1	0.01491	0.257	0.04334	0.445	0.00080999	0.0637	0.11239	0.606
del_xq26.2	67 (18%)	303	0.11595	0.606	0.06027	0.505	0.50725	0.849	0.31304	0.749	0.46363	0.835	0.58695	0.876	0.77275	0.968	0.21962	0.67	0.19194	0.67	0.4865	0.847	0.055959	0.49	0.74661	0.954