GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM 31 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM 0.73632 1.566 0.03726 0.54212 0.955 0.484 0.0973 0.438 0.29182 0.164 KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 34 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 0.52774 1.5948 0.02686 0.57176 0.929 0.294 0.142 0.253 0.29005 0.173 KEGG_LYSINE_DEGRADATION 44 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSINE_DEGRADATION 0.51269 1.7192 0.04277 1 0.732 0.432 0.268 0.317 0.60417 0.345 KEGG_PYRUVATE_METABOLISM 39 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRUVATE_METABOLISM 0.51461 1.6158 0.03137 0.77356 0.914 0.41 0.186 0.335 0.37505 0.236 KEGG_DNA_REPLICATION 36 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DNA_REPLICATION 0.65893 1.5648 0.064 0.49186 0.956 0.667 0.236 0.51 0.26443 0.145 KEGG_BASE_EXCISION_REPAIR 33 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASE_EXCISION_REPAIR 0.49641 1.597 0.06667 0.60782 0.928 0.394 0.238 0.301 0.30356 0.185 KEGG_NUCLEOTIDE_EXCISION_REPAIR 44 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NUCLEOTIDE_EXCISION_REPAIR 0.46054 1.7122 0.04 1 0.742 0.455 0.317 0.311 0.42259 0.267 KEGG_OOCYTE_MEIOSIS 107 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OOCYTE_MEIOSIS 0.4677 1.604 0.03366 0.75424 0.921 0.234 0.0773 0.217 0.3701 0.222 PID_FANCONI_PATHWAY 46 http://www.broadinstitute.org/gsea/msigdb/cards/PID_FANCONI_PATHWAY 0.68687 1.6677 0.02008 0.7855 0.836 0.5 0.148 0.427 0.31989 0.222 PID_E2F_PATHWAY 70 http://www.broadinstitute.org/gsea/msigdb/cards/PID_E2F_PATHWAY 0.55793 1.5838 0.06024 0.53936 0.938 0.386 0.152 0.328 0.28462 0.166 REACTOME_GLUCONEOGENESIS 30 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GLUCONEOGENESIS 0.57281 1.6827 0.02395 0.84925 0.812 0.267 0.0987 0.241 0.33301 0.224 REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER 44 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER 0.44269 1.5989 0.08247 0.70981 0.927 0.295 0.236 0.226 0.35513 0.216 REACTOME_M_G1_TRANSITION 72 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_M_G1_TRANSITION 0.58993 1.5976 0.05522 0.65633 0.928 0.319 0.195 0.258 0.32699 0.192 REACTOME_NUCLEOTIDE_EXCISION_REPAIR 49 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_NUCLEOTIDE_EXCISION_REPAIR 0.43379 1.6532 0.06996 0.75142 0.867 0.367 0.293 0.261 0.32335 0.209 REACTOME_SYNTHESIS_OF_DNA 84 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SYNTHESIS_OF_DNA 0.57788 1.6348 0.05274 0.75645 0.904 0.381 0.2 0.306 0.33885 0.225 REACTOME_MITOTIC_M_M_G1_PHASES 161 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MITOTIC_M_M_G1_PHASES 0.62133 1.5832 0.05743 0.51014 0.94 0.416 0.195 0.338 0.26943 0.151 REACTOME_DNA_REPAIR 105 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_DNA_REPAIR 0.50715 1.783 0.02806 1 0.558 0.362 0.25 0.273 0.50163 0.354 REACTOME_GLOBAL_GENOMIC_NER_GG_NER 33 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GLOBAL_GENOMIC_NER_GG_NER 0.52063 1.7054 0.05317 0.89152 0.76 0.515 0.293 0.365 0.33222 0.222 REACTOME_DNA_REPLICATION 181 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_DNA_REPLICATION 0.61937 1.5931 0.05906 0.53997 0.93 0.436 0.195 0.355 0.27735 0.164 REACTOME_GLUCOSE_METABOLISM 63 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GLUCOSE_METABOLISM 0.42347 1.5659 0.0297 0.51378 0.955 0.27 0.135 0.234 0.27647 0.149