Lung Adenocarcinoma: Correlation between mRNA expression and clinical features
Maintained by TCGA GDAC Team
(Broad Institute/Dana-Farber Cancer Institute/Harvard Medical School)
Overview
Introduction
Summary
Testing the association between 17814 genes and 11 clinical features across 23 samples, statistically thresholded by Q value < 0.05, no clinical feature related to at least one genes.
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No genes correlated to 'Time to Death', 'AGE', 'GENDER', 'PATHOLOGY.T', 'PATHOLOGY.N', 'TUMOR.STAGE', 'NEOADJUVANT.THERAPY', 'NUMBERPACKYEARSSMOKED', 'STOPPEDSMOKINGYEAR', 'TOBACCOSMOKINGHISTORYINDICATOR', and 'YEAROFTOBACCOSMOKINGONSET'.
Results
Overview of the results
Complete statistical result table is provided in Supplement Table 1
Table 1. Get Full Table This table shows the clinical features, statistical methods used, and the number of genes that are significantly associated with each clinical feature at Q value < 0.05.
| Clinical feature | Statistical test | Significant genes | Associated with | Associated with | ||
|---|---|---|---|---|---|---|
| Time to Death | Cox regression test | N=0 | ||||
| AGE | Spearman correlation test | N=0 | ||||
| GENDER | t test | N=0 | ||||
| PATHOLOGY T | t test | N=0 | ||||
| PATHOLOGY N | Spearman correlation test | N=0 | ||||
| TUMOR STAGE | Spearman correlation test | N=0 | ||||
| NEOADJUVANT THERAPY | t test | N=0 | ||||
| NUMBERPACKYEARSSMOKED | Spearman correlation test | N=0 | ||||
| STOPPEDSMOKINGYEAR | Spearman correlation test | N=0 | ||||
| TOBACCOSMOKINGHISTORYINDICATOR | ANOVA test | N=0 | ||||
| YEAROFTOBACCOSMOKINGONSET | Spearman correlation test | N=0 |
Methods & Data
Copyright © 2012
Broad Institute TCGA GDAC as part of the TCGA Research Network.
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