name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-D3-A1Q4-06A-11D-A196-08	332	322	10	213	3.012048e-02	1	exome+100bp flanks	34834024	108	211	3.100417e-06	6.057296e-06
TCGA-D3-A1Q5-06A-11D-A196-08	450	440	10	299	2.222222e-02	0	coding only	34834024	137	293	3.932936e-06	8.411316e-06
TCGA-D3-A1Q6-06A-11D-A196-08	1069	1050	19	671	1.777362e-02	0	coding only	34834024	373	662	1.070792e-05	1.900441e-05
TCGA-D3-A1Q7-06A-11D-A19A-08	131	129	2	81	1.526718e-02	0	coding only	34834024	48	78	1.377963e-06	2.239190e-06
TCGA-D3-A1Q9-06A-11D-A19A-08	48	45	3	36	6.250000e-02	0	coding only	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-D3-A1QA-06A-11D-A196-08	603	588	15	390	2.487562e-02	0	coding only	34834024	196	383	5.626683e-06	1.099500e-05
TCGA-D3-A2J7-06A-11D-A196-08	428	414	14	293	3.271028e-02	1	exome+100bp flanks	34834024	119	286	3.416200e-06	8.210364e-06
TCGA-D3-A2J9-06A-11D-A196-08	106	106	0	64	0	0	coding only	34834024	42	61	1.205718e-06	1.751161e-06
TCGA-D3-A2JA-06A-11D-A196-08	448	436	12	299	2.678571e-02	0	coding only	34834024	134	292	3.846814e-06	8.382609e-06
TCGA-D3-A2JD-06A-11D-A19A-08	512	504	8	338	1.562500e-02	0	coding only	34834024	166	331	4.765456e-06	9.502204e-06
TCGA-D3-A2JG-06A-11D-A196-08	146	143	3	96	2.054795e-02	0	coding only	34834024	45	95	1.291840e-06	2.727219e-06
TCGA-D3-A2JK-06A-11D-A196-08	378	372	6	254	1.587302e-02	0	coding only	34834024	118	250	3.387493e-06	7.176891e-06
TCGA-D3-A2JN-06A-11D-A196-08	438	430	8	303	1.826484e-02	0	coding only	34834024	126	296	3.617153e-06	8.497439e-06
TCGA-D3-A2JP-06A-11D-A19A-08	348	342	6	249	1.724138e-02	0	coding only	34834024	91	242	2.612388e-06	6.947231e-06
TCGA-D3-A3C1-06A-12D-A196-08	187	183	4	130	2.139037e-02	0	coding only	34834024	53	129	1.521501e-06	3.703276e-06
TCGA-D3-A3C3-06A-12D-A19A-08	319	311	8	217	2.507837e-02	0	coding only	34834024	93	217	2.669804e-06	6.229542e-06
TCGA-D3-A3C6-06A-12D-A196-08	156	154	2	103	1.282051e-02	0	coding only	34834024	48	102	1.377963e-06	2.928172e-06
TCGA-D3-A3C7-06A-11D-A196-08	1162	1142	20	793	1.721170e-02	0	coding only	34834024	346	786	9.932817e-06	2.256415e-05
TCGA-D3-A3CB-06A-11D-A196-08	335	328	7	217	2.089552e-02	0	coding only	34834024	111	214	3.186540e-06	6.143419e-06
TCGA-D3-A3CE-06A-11D-A19A-08	91	89	2	75	2.197802e-02	0	coding only	34834024	13	73	3.731983e-07	2.095652e-06
TCGA-D3-A3MO-06A-11D-A21A-08	89	86	3	63	3.370787e-02	0	coding only	34834024	23	62	6.602740e-07	1.779869e-06
TCGA-D3-A3MR-06A-11D-A21A-08	1083	1060	23	714	2.123730e-02	0	coding only	34834024	342	707	9.817987e-06	2.029625e-05
TCGA-D3-A3MU-06A-11D-A21A-08	597	585	12	404	2.010050e-02	0	coding only	34834024	178	395	5.109947e-06	1.133949e-05
TCGA-D9-A148-06A-11D-A19A-08	368	356	12	242	3.260870e-02	1	exome+100bp flanks	34834024	110	237	3.157832e-06	6.803693e-06
TCGA-D9-A1JX-06A-11D-A19A-08	233	226	7	160	3.004292e-02	1	exome+100bp flanks	34834024	65	159	1.865992e-06	4.564503e-06
TCGA-DA-A1HW-06A-11D-A19A-08	411	404	7	260	1.703163e-02	0	coding only	34834024	141	257	4.047767e-06	7.377844e-06
TCGA-DA-A1HY-06A-11D-A19A-08	904	886	18	600	1.991150e-02	0	coding only	34834024	280	590	8.038118e-06	1.693746e-05
TCGA-DA-A1I0-06A-11D-A20D-08	636	618	18	417	2.830189e-02	0	coding only	34834024	199	408	5.712805e-06	1.171269e-05
TCGA-DA-A1I2-06A-21D-A19A-08	167	162	5	110	2.994012e-02	0	coding only	34834024	50	109	1.435378e-06	3.129125e-06
TCGA-DA-A1I4-06A-11D-A196-08	313	307	6	219	1.916933e-02	0	coding only	34834024	88	216	2.526266e-06	6.200834e-06
TCGA-DA-A1I5-06A-11D-A197-08	552	548	4	371	7.246377e-03	0	coding only	34834024	174	369	4.995116e-06	1.059309e-05
TCGA-DA-A1I7-06A-22D-A197-08	574	564	10	372	1.742160e-02	0	coding only	34834024	189	365	5.425730e-06	1.047826e-05
TCGA-DA-A1I8-06A-11D-A197-08	237	231	6	140	2.531646e-02	0	coding only	34834024	91	135	2.612388e-06	3.875521e-06
TCGA-DA-A3F5-06A-11D-A20D-08	422	412	10	283	2.369668e-02	0	coding only	34834024	128	281	3.674568e-06	8.066826e-06
TCGA-DA-A3F8-06A-11D-A20D-08	1481	1462	19	962	1.282917e-02	0	coding only	34834024	492	945	1.412412e-05	2.712865e-05
TCGA-EE-A17Y-06A-11D-A196-08	215	213	2	143	9.302326e-03	0	coding only	34834024	69	137	1.980822e-06	3.932936e-06
TCGA-EE-A183-06A-11D-A196-08	968	951	17	664	1.756198e-02	0	coding only	34834024	280	653	8.038118e-06	1.874604e-05
TCGA-EE-A20B-06A-11D-A196-08	230	225	5	157	2.173913e-02	0	coding only	34834024	66	154	1.894699e-06	4.420965e-06
TCGA-EE-A20F-06A-21D-A196-08	644	627	17	418	2.639752e-02	0	coding only	34834024	206	416	5.913758e-06	1.194235e-05
TCGA-EE-A20H-06A-11D-A197-08	747	724	23	509	3.078983e-02	1	exome+100bp flanks	34834024	214	492	6.143419e-06	1.412412e-05
TCGA-EE-A29A-06A-12D-A196-08	315	309	6	212	1.904762e-02	0	coding only	34834024	95	209	2.727219e-06	5.999881e-06
TCGA-EE-A29C-06A-21D-A197-08	503	498	5	335	9.940358e-03	0	coding only	34834024	162	332	4.650625e-06	9.530912e-06
TCGA-EE-A29E-06A-11D-A197-08	4405	4315	90	2824	2.043133e-02	0	coding only	34834024	1475	2776	4.234366e-05	7.969220e-05
TCGA-EE-A29H-06A-12D-A197-08	396	383	13	257	3.282828e-02	1	exome+100bp flanks	34834024	125	253	3.588446e-06	7.263014e-06
TCGA-EE-A29M-06A-11D-A196-08	2893	2838	55	1913	1.901141e-02	0	coding only	34834024	911	1876	2.615259e-05	5.385539e-05
TCGA-EE-A29P-06A-11D-A197-08	387	383	4	255	1.033592e-02	0	coding only	34834024	126	247	3.617153e-06	7.090768e-06
TCGA-EE-A29W-06A-11D-A196-08	98	97	1	69	1.020408e-02	0	coding only	34834024	28	69	8.038118e-07	1.980822e-06
TCGA-EE-A2A6-06A-11D-A197-08	376	370	6	242	1.595745e-02	0	coding only	34834024	125	240	3.588446e-06	6.889816e-06
TCGA-EE-A2GB-06A-11D-A197-08	812	798	14	547	1.724138e-02	0	coding only	34834024	245	539	7.033353e-06	1.547338e-05
TCGA-EE-A2GE-06A-11D-A196-08	308	303	5	206	1.623377e-02	0	coding only	34834024	96	202	2.755926e-06	5.798928e-06
TCGA-EE-A2GH-06A-11D-A196-08	420	413	7	291	1.666667e-02	0	coding only	34834024	121	285	3.473615e-06	8.181656e-06
TCGA-EE-A2GS-06A-12D-A197-08	422	405	17	280	4.028436e-02	1	exome+100bp flanks	34834024	124	275	3.559738e-06	7.894580e-06
TCGA-EE-A2GT-06A-12D-A197-08	452	443	9	309	1.991150e-02	0	coding only	34834024	134	304	3.846814e-06	8.727100e-06
TCGA-EE-A2M5-06A-12D-A197-08	2430	2386	44	1606	1.810700e-02	0	coding only	34834024	772	1587	2.216224e-05	4.555891e-05
TCGA-EE-A2M6-06A-12D-A197-08	678	665	13	459	1.917404e-02	0	coding only	34834024	205	451	5.885051e-06	1.294711e-05
TCGA-EE-A2M7-06A-11D-A197-08	106	102	4	67	3.773585e-02	0	coding only	34834024	35	66	1.004765e-06	1.894699e-06
TCGA-EE-A2M8-06A-12D-A196-08	153	150	3	100	1.960784e-02	0	coding only	34834024	49	97	1.406671e-06	2.784634e-06
TCGA-EE-A2ME-06A-11D-A197-08	107	105	2	76	1.869159e-02	0	coding only	34834024	28	76	8.038118e-07	2.181775e-06
TCGA-EE-A2MG-06A-11D-A197-08	281	274	7	186	2.491103e-02	0	coding only	34834024	85	184	2.440143e-06	5.282192e-06
TCGA-EE-A2MH-06A-11D-A197-08	202	194	8	116	3.960396e-02	1	exome+100bp flanks	34834024	77	112	2.210482e-06	3.215247e-06
TCGA-EE-A2MK-06A-11D-A196-08	381	372	9	246	2.362205e-02	0	coding only	34834024	124	238	3.559738e-06	6.832400e-06
TCGA-EE-A2MP-06A-11D-A197-08	347	338	9	248	2.593660e-02	0	coding only	34834024	89	247	2.554973e-06	7.090768e-06
TCGA-EE-A3AB-06A-11D-A196-08	828	817	11	581	1.328502e-02	0	coding only	34834024	234	573	6.717570e-06	1.644943e-05
TCGA-EE-A3AD-06A-11D-A196-08	578	568	10	366	1.730104e-02	0	coding only	34834024	198	362	5.684098e-06	1.039214e-05
TCGA-EE-A3AF-06A-11D-A196-08	1165	1145	20	811	1.716738e-02	0	coding only	34834024	327	797	9.387374e-06	2.287993e-05
TCGA-EE-A3AG-06A-31D-A196-08	2128	2088	40	1366	1.879699e-02	0	coding only	34834024	717	1347	2.058332e-05	3.866909e-05
TCGA-EE-A3AH-06A-11D-A196-08	476	469	7	328	1.470588e-02	0	coding only	34834024	138	324	3.961644e-06	9.301251e-06
TCGA-EE-A3J3-06A-11D-A20D-08	231	223	8	141	3.463203e-02	1	exome+100bp flanks	34834024	78	137	2.239190e-06	3.932936e-06
TCGA-EE-A3J4-06A-11D-A20D-08	403	389	14	284	3.473945e-02	1	exome+100bp flanks	34834024	104	277	2.985587e-06	7.951995e-06
TCGA-EE-A3JB-06A-11D-A21A-08	775	759	16	510	2.064516e-02	0	coding only	34834024	244	504	7.004646e-06	1.446861e-05
TCGA-EE-A3JE-06A-11D-A20D-08	340	335	5	244	1.470588e-02	0	coding only	34834024	88	242	2.526266e-06	6.947231e-06
TCGA-ER-A193-06A-12D-A197-08	2382	2343	39	1621	1.637280e-02	0	coding only	34834024	707	1602	2.029625e-05	4.598952e-05
TCGA-ER-A198-06A-11D-A196-08	572	565	7	391	1.223776e-02	0	coding only	34834024	168	387	4.822871e-06	1.110983e-05
TCGA-ER-A19B-06A-11D-A196-08	179	179	0	138	0	0	coding only	34834024	40	136	1.148303e-06	3.904229e-06
TCGA-ER-A19C-06A-11D-A196-08	137	131	6	82	4.379562e-02	1	exome+100bp flanks	34834024	49	79	1.406671e-06	2.267898e-06
TCGA-ER-A19E-06A-11D-A197-08	559	550	9	379	1.610018e-02	0	coding only	34834024	168	375	4.822871e-06	1.076534e-05
TCGA-ER-A19G-06A-11D-A196-08	663	654	9	424	1.357466e-02	0	coding only	34834024	227	417	6.516617e-06	1.197105e-05
TCGA-ER-A19H-06A-12D-A196-08	342	335	7	224	2.046784e-02	0	coding only	34834024	111	219	3.186540e-06	6.286957e-06
TCGA-ER-A19J-06A-11D-A196-08	283	271	12	185	4.240283e-02	1	exome+100bp flanks	34834024	86	182	2.468851e-06	5.224777e-06
TCGA-ER-A19O-06A-11D-A197-08	220	214	6	148	2.727273e-02	0	coding only	34834024	66	143	1.894699e-06	4.105182e-06
TCGA-ER-A19P-06A-11D-A196-08	2751	2714	37	2008	1.344965e-02	0	coding only	34834024	699	1974	2.006659e-05	5.666873e-05
TCGA-ER-A19Q-06A-11D-A197-08	153	153	0	104	0	0	coding only	34834024	48	102	1.377963e-06	2.928172e-06
TCGA-ER-A19S-06A-11D-A196-08	277	271	6	190	2.166065e-02	0	coding only	34834024	80	188	2.296605e-06	5.397022e-06
TCGA-ER-A2NC-06A-11D-A197-08	485	473	12	316	2.474227e-02	0	coding only	34834024	155	310	4.449673e-06	8.899345e-06
TCGA-ER-A2ND-06A-11D-A196-08	139	133	6	100	4.316547e-02	1	exome+100bp flanks	34834024	33	95	9.473496e-07	2.727219e-06
TCGA-ER-A2NG-06A-11D-A196-08	314	309	5	216	1.592357e-02	0	coding only	34834024	93	210	2.669804e-06	6.028589e-06
TCGA-FS-A1YX-06A-11D-A197-08	31	30	1	25	3.225806e-02	0	coding only	34834024	5	24	1.435378e-07	6.889816e-07
TCGA-FS-A1YY-06A-11D-A197-08	261	255	6	162	2.298851e-02	0	coding only	34834024	92	162	2.641096e-06	4.650625e-06
TCGA-FS-A1ZC-06A-11D-A197-08	895	878	17	570	1.899441e-02	0	coding only	34834024	303	558	8.698392e-06	1.601882e-05
TCGA-FS-A1ZD-06A-11D-A197-08	319	314	5	223	1.567398e-02	0	coding only	34834024	89	220	2.554973e-06	6.315664e-06
TCGA-FS-A1ZF-06A-12D-A197-08	250	240	10	162	4.000000e-02	1	exome+100bp flanks	34834024	74	160	2.124360e-06	4.593210e-06
TCGA-FS-A1ZH-06A-11D-A197-08	50	50	0	37	0	0	coding only	34834024	13	34	3.731983e-07	9.760572e-07
TCGA-FS-A1ZM-06A-12D-A197-08	316	306	10	218	3.164557e-02	1	exome+100bp flanks	34834024	87	212	2.497558e-06	6.086004e-06
TCGA-FS-A1ZR-06A-21D-A197-08	189	186	3	130	1.587302e-02	0	coding only	34834024	54	130	1.550208e-06	3.731983e-06
TCGA-FS-A1ZS-06A-12D-A197-08	356	351	5	220	1.404494e-02	0	coding only	34834024	131	215	3.760691e-06	6.172126e-06
TCGA-GN-A262-06A-11D-A196-08	463	456	7	321	1.511879e-02	0	coding only	34834024	133	317	3.818106e-06	9.100298e-06
TCGA-GN-A265-06A-21D-A197-08	362	356	6	265	1.657459e-02	0	coding only	34834024	90	264	2.583681e-06	7.578797e-06
