| Pipeline | NotRun | InProcess | Successful | Unsuccessful |
|---|
| 1 | Aggregate_Analysis_Features | 0 | 0 | 1 | 0
|
| 2 | Aggregate_Molecular_Subtype_Clusters | 0 | 0 | 1 | 0
|
| 3 | Clinical_Pick_Tier1 | 0 | 0 | 1 | 0
|
| 4 | CopyNumber_Clustering_CNMF | 1 | 0 | 0 | 0
|
| 5 | CopyNumber_Clustering_CNMF_thresholded | 1 | 0 | 0 | 0
|
| 6 | CopyNumber_Gistic2_Postprocess_Focal | 1 | 0 | 0 | 0
|
| 7 | CopyNumber_Gistic2_wxs | 0 | 0 | 0 | 1
|
| 8 | Correlate_Clinical_vs_CopyNumber_Arm | 1 | 0 | 0 | 0
|
| 9 | Correlate_Clinical_vs_CopyNumber_Focal | 1 | 0 | 0 | 0
|
| 10 | Correlate_Clinical_vs_Molecular_Subtypes | 0 | 0 | 1 | 0
|
| 11 | Correlate_Clinical_vs_mRNA | 0 | 0 | 0 | 1
|
| 12 | Correlate_Clinical_vs_Mutation | 1 | 0 | 0 | 0
|
| 13 | Correlate_Clinical_vs_Mutation_APOBEC_Categorical | 1 | 0 | 0 | 0
|
| 14 | Correlate_Clinical_vs_Mutation_APOBEC_Continuous | 1 | 0 | 0 | 0
|
| 15 | Correlate_Clinical_vs_MutationRate | 1 | 0 | 0 | 0
|
| 16 | Correlate_molecularSubtype_vs_CopyNumber_Arm | 1 | 0 | 0 | 0
|
| 17 | Correlate_molecularSubtype_vs_CopyNumber_Focal | 0 | 0 | 0 | 1
|
| 18 | Correlate_molecularSubtype_vs_Mutation | 1 | 0 | 0 | 0
|
| 19 | Merge_clinical | 0 | 0 | 1 | 0
|
| 20 | Merge_CNV__wxs | 0 | 0 | 0 | 1
|
| 21 | Merge_methylation__EPIC | 0 | 0 | 1 | 0
|
| 22 | Merge_mRNA__geneExp__FPKM | 0 | 0 | 0 | 1
|
| 23 | Merge_SNV__varscan | 0 | 0 | 0 | 1
|
| 24 | Methylation__EPIC_Clustering_CNMF | 0 | 0 | 1 | 0
|
| 25 | Methylation__EPIC_Clustering_Consensus_Plus | 0 | 0 | 1 | 0
|
| 26 | Methylation__EPIC_Preprocess | 0 | 0 | 1 | 0
|
| 27 | mRNA_Preprocess_FPKM | 1 | 0 | 0 | 0
|
| 28 | mRNA_protein_coding_Clustering_CNMF | 0 | 0 | 0 | 1
|
| 29 | mRNA_protein_coding_Clustering_Consensus_Plus | 0 | 0 | 0 | 1
|
| 30 | Mutation_APOBEC | 1 | 0 | 0 | 0
|
| 31 | Mutation_Assessor | 1 | 0 | 0 | 0
|
| 32 | Mutation_MutSig2CV_hg19 | 0 | 0 | 0 | 1
|
| 33 | Mutation_Signature_Analyzer | 1 | 0 | 0 | 0
|
| Total | 15 | 0 | 9 | 9 |