task(click here to sort by failures)ACCBLCABLCA-FFPEBRCABRCA-FFPECESCCHOLCOADCOAD-FFPECOADREADCOADREAD-FFPEDLBCESCAFPPPFPPP-FFPEGBMGBMLGGHNSCKICHKIPANKIPAN-FFPEKIRCKIRC-FFPEKIRPLAMLLGGLIHCLNNHLUADLUAD-FFPELUSCMESOOVPAADPANCAN12PANCAN12-FFPEPANCANCERPCPGPRADPRAD-FFPEREADSARCSARC-FFPESKCMSTADSTESTCGA-ACCTCGA-BLCATCGA-BRCATCGA-CESCTCGA-CHOLTCGA-COADTCGA-COADREADTCGA-DLBCTCGA-ESCATCGA-GBMTCGA-GBMLGGTCGA-HNSCTCGA-KICHTCGA-KIPANTCGA-KIRCTCGA-KIRPTCGA-LAMLTCGA-LGGTCGA-LIHCTCGA-LUADTCGA-LUSCTCGA-MESOTCGA-OVTCGA-PAADTCGA-PANGITCGA-PCPGTCGA-PRADTCGA-READTCGA-SARCTCGA-SKCMTCGA-STADTCGA-STESTCGA-TGCTTCGA-THCATCGA-THYMTCGA-UCECTCGA-UCSTCGA-UVMTGCTTHCATHYMUCECUCEC-FFPEUCSUVM
Aggregate_AnalysisFeatures
Aggregate_Gene_Status
Aggregate_Molecular_Subtype_Clusters
Append_CustomClinical
CoMut2.0
CoMut2CV
CoMutCV
CopyNumber_Clustering_CNMF
CopyNumber_Clustering_CNMF_thresholded
CopyNumber_Gistic2
CopyNumber_Gistic2_Postprocess_Focal
CopyNumberLowPass_Gistic2
Correlate_Clinical_vs_CopyNumber_Arm
Correlate_Clinical_vs_CopyNumber_Focal
Correlate_Clinical_vs_Methylation
Correlate_Clinical_vs_miR
Correlate_Clinical_vs_miRseq
Correlate_Clinical_vs_Molecular_Subtypes
Correlate_Clinical_vs_mRNA
Correlate_Clinical_vs_mRNAseq
Correlate_Clinical_vs_Mutation
Correlate_Clinical_vs_Mutation_APOBEC_Categorical
Correlate_Clinical_vs_Mutation_APOBEC_Continuous
Correlate_Clinical_vs_MutationRate
Correlate_Clinical_vs_RPPA
Correlate_CopyNumber_vs_miR
Correlate_CopyNumber_vs_mRNA
Correlate_CopyNumber_vs_mRNAseq
Correlate_Methylation_vs_mRNA
Correlate_molecularSubtype_vs_CopyNumber_Arm
Correlate_molecularSubtype_vs_CopyNumber_Focal
Correlate_molecularSubtype_vs_Mutation
Correlate_mRNAseq_vs_Mutation_APOBEC
GenerateStickFigures2.0
GenerateStickFigures2CV
GenerateStickFiguresCV
iClusterPlus
LegoPlotter2.0
LegoPlotter2CV
LegoPlotterCV
Methylation_Clustering_CNMF
Methylation_Preprocess
miR_Clustering_CNMF
miR_Clustering_Consensus_Plus
miR_FindDirectTargets
miR_Mature_Clustering_CNMF
miR_Mature_Clustering_Consensus_Plus
miR_Mature_Preprocess
miRseq_Clustering_CNMF
miRseq_Clustering_Consensus_Plus
miRseq_FindDirectTargets
miRseq_Mature_Clustering_CNMF
miRseq_Mature_Clustering_Consensus_Plus
mRNA_Clustering_CNMF
mRNA_Clustering_Consensus_Plus
mRNA_lincRNA_Clustering_Consensus_Plus
mRNA_lincRNA_CNMF
mRNA_Preprocess
mRNA_protein_coding_Clustering_CNMF
mRNA_protein_coding_Clustering_Consensus_Plus
mRNAseq_Clustering_CNMF
mRNAseq_Clustering_Consensus_Plus
Mutation_APOBEC
Mutation_Assessor
Mutation_CHASM
Mutation_CoOccurrence
Mutation_CoOccurrence_Custom
Mutation_Signature
MutSigNozzleReport2.0
MutSigNozzleReport2CV
MutSigNozzleReportCV
MutSigPreprocess2.0
MutSigRun2.0
MutSigRun2CV
MutSigRunCV
NT-Aggregate_AnalysisFeatures
NT-Aggregate_Gene_Status
NT-Aggregate_Molecular_Subtype_Clusters
NT-Append_CustomClinical
NT-CoMut2.0
NT-CoMut2CV
NT-CoMutCV
NT-CopyNumber_Clustering_CNMF
NT-CopyNumber_Clustering_CNMF_thresholded
NT-CopyNumber_Gistic2
NT-CopyNumber_Gistic2_Postprocess_Focal
NT-CopyNumberLowPass_Gistic2
NT-Correlate_Clinical_vs_CopyNumber_Arm
NT-Correlate_Clinical_vs_CopyNumber_Focal
NT-Correlate_Clinical_vs_Methylation
NT-Correlate_Clinical_vs_miR
NT-Correlate_Clinical_vs_miRseq
NT-Correlate_Clinical_vs_Molecular_Subtypes
NT-Correlate_Clinical_vs_mRNA
NT-Correlate_Clinical_vs_mRNAseq
NT-Correlate_Clinical_vs_Mutation
NT-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
NT-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
NT-Correlate_Clinical_vs_MutationRate
NT-Correlate_Clinical_vs_RPPA
NT-Correlate_CopyNumber_vs_miR
NT-Correlate_CopyNumber_vs_mRNA
NT-Correlate_CopyNumber_vs_mRNAseq
NT-Correlate_Methylation_vs_mRNA
NT-Correlate_molecularSubtype_vs_CopyNumber_Arm
NT-Correlate_molecularSubtype_vs_CopyNumber_Focal
NT-Correlate_molecularSubtype_vs_Mutation
NT-Correlate_mRNAseq_vs_Mutation_APOBEC
NT-GenerateStickFigures2.0
NT-GenerateStickFigures2CV
NT-GenerateStickFiguresCV
NT-iClusterPlus
NT-LegoPlotter2.0
NT-LegoPlotter2CV
NT-LegoPlotterCV
NT-Methylation_Clustering_CNMF
NT-Methylation_Preprocess
NT-miR_Clustering_CNMF
NT-miR_Clustering_Consensus_Plus
NT-miR_FindDirectTargets
NT-miR_Mature_Clustering_CNMF
NT-miR_Mature_Clustering_Consensus_Plus
NT-miR_Mature_Preprocess
NT-miRseq_Clustering_CNMF
NT-miRseq_Clustering_Consensus_Plus
NT-miRseq_FindDirectTargets
NT-miRseq_Mature_Clustering_CNMF
NT-miRseq_Mature_Clustering_Consensus_Plus
NT-mRNA_Clustering_CNMF
NT-mRNA_Clustering_Consensus_Plus
NT-mRNA_lincRNA_Clustering_Consensus_Plus
NT-mRNA_lincRNA_CNMF
NT-mRNA_Preprocess
NT-mRNA_protein_coding_Clustering_CNMF
NT-mRNA_protein_coding_Clustering_Consensus_Plus
NT-mRNAseq_Clustering_CNMF
NT-mRNAseq_Clustering_Consensus_Plus
NT-Mutation_APOBEC
NT-Mutation_Assessor
NT-Mutation_CHASM
NT-Mutation_CoOccurrence
NT-Mutation_CoOccurrence_Custom
NT-Mutation_Signature
NT-MutSigNozzleReport2.0
NT-MutSigNozzleReport2CV
NT-MutSigNozzleReportCV
NT-MutSigPreprocess2.0
NT-MutSigRun2.0
NT-MutSigRun2CV
NT-MutSigRunCV
NT-Paradigm_mRNA
NT-Paradigm_mRNA_And_CopyNumber
NT-Paradigm_Prepare_mRNA
NT-Paradigm_Prepare_mRNA_And_Copy_Number
NT-Paradigm_Prepare_RNASeq
NT-Paradigm_Prepare_RNASeq_And_Copy_Number
NT-Paradigm_Preprocess_mRNA
NT-ParadigmPreprocess_mRNA
NT-Paradigm_Preprocess_mRNA_And_Copy_Number
NT-Paradigm_Preprocess_RNASeq
NT-ParadigmPreprocess_RNASeq
NT-Paradigm_Preprocess_RNASeq_And_Copy_Number
NT-Paradigm_Report_Preprocess_mRNA
NT-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
NT-Paradigm_Report_Preprocess_RNASeq
NT-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
NT-Paradigm_RNASeq
NT-Paradigm_RNASeq_And_Copy_Number
NT-Pathway_FindEnrichedGenes
NT-Pathway_GSEA_mRNA
NT-Pathway_GSEA_mRNAseq
NT-Pathway_Hotnet
NT-Pathway_Overlaps_MSigDB_MutSig2CV
NT-Pathway_Paradigm_mRNA
NT-Pathway_Paradigm_mRNA_And_Copy_Number
NT-Pathway_Paradigm_RNASeq
NT-Pathway_Paradigm_RNASeq_And_Copy_Number
NT-ProcessCoverageForMutSig2.0
NT-RPPA_Clustering_CNMF
NT-RPPA_Clustering_Consensus_Plus
Paradigm_mRNA
Paradigm_mRNA_And_CopyNumber
Paradigm_Prepare_mRNA
Paradigm_Prepare_mRNA_And_Copy_Number
Paradigm_Prepare_RNASeq
Paradigm_Prepare_RNASeq_And_Copy_Number
Paradigm_Preprocess_mRNA
ParadigmPreprocess_mRNA
Paradigm_Preprocess_mRNA_And_Copy_Number
Paradigm_Preprocess_RNASeq
ParadigmPreprocess_RNASeq
Paradigm_Preprocess_RNASeq_And_Copy_Number
Paradigm_Report_Preprocess_mRNA
Paradigm_Report_Preprocess_mRNA_And_CopyNumber
Paradigm_Report_Preprocess_RNASeq
Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
Paradigm_RNASeq
Paradigm_RNASeq_And_Copy_Number
Pathway_FindEnrichedGenes
Pathway_GSEA_mRNA
Pathway_GSEA_mRNAseq
Pathway_Hotnet
Pathway_Overlaps_MSigDB_MutSig2CV
Pathway_Paradigm_mRNA
Pathway_Paradigm_mRNA_And_Copy_Number
Pathway_Paradigm_RNASeq
Pathway_Paradigm_RNASeq_And_Copy_Number
ProcessCoverageForMutSig2.0
RPPA_Clustering_CNMF
RPPA_Clustering_Consensus_Plus
TB-Aggregate_AnalysisFeatures
TB-Aggregate_Gene_Status
TB-Aggregate_Molecular_Subtype_Clusters
TB-Append_CustomClinical
TB-CoMut2.0
TB-CoMut2CV
TB-CoMutCV
TB-CopyNumber_Clustering_CNMF
TB-CopyNumber_Clustering_CNMF_thresholded
TB-CopyNumber_Gistic2
TB-CopyNumber_Gistic2_Postprocess_Focal
TB-CopyNumberLowPass_Gistic2
TB-Correlate_Clinical_vs_CopyNumber_Arm
TB-Correlate_Clinical_vs_CopyNumber_Focal
TB-Correlate_Clinical_vs_Methylation
TB-Correlate_Clinical_vs_miR
TB-Correlate_Clinical_vs_miRseq
TB-Correlate_Clinical_vs_Molecular_Subtypes
TB-Correlate_Clinical_vs_mRNA
TB-Correlate_Clinical_vs_mRNAseq
TB-Correlate_Clinical_vs_Mutation
TB-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
TB-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
TB-Correlate_Clinical_vs_MutationRate
TB-Correlate_Clinical_vs_RPPA
TB-Correlate_CopyNumber_vs_miR
TB-Correlate_CopyNumber_vs_mRNA
TB-Correlate_CopyNumber_vs_mRNAseq
TB-Correlate_Methylation_vs_mRNA
TB-Correlate_molecularSubtype_vs_CopyNumber_Arm
TB-Correlate_molecularSubtype_vs_CopyNumber_Focal
TB-Correlate_molecularSubtype_vs_Mutation
TB-Correlate_mRNAseq_vs_Mutation_APOBEC
TB-GenerateStickFigures2.0
TB-GenerateStickFigures2CV
TB-GenerateStickFiguresCV
TB-iClusterPlus
TB-LegoPlotter2.0
TB-LegoPlotter2CV
TB-LegoPlotterCV
TB-Methylation_Clustering_CNMF
TB-Methylation_Preprocess
TB-miR_Clustering_CNMF
TB-miR_Clustering_Consensus_Plus
TB-miR_FindDirectTargets
TB-miR_Mature_Clustering_CNMF
TB-miR_Mature_Clustering_Consensus_Plus
TB-miR_Mature_Preprocess
TB-miRseq_Clustering_CNMF
TB-miRseq_Clustering_Consensus_Plus
TB-miRseq_FindDirectTargets
TB-miRseq_Mature_Clustering_CNMF
TB-miRseq_Mature_Clustering_Consensus_Plus
TB-mRNA_Clustering_CNMF
TB-mRNA_Clustering_Consensus_Plus
TB-mRNA_lincRNA_Clustering_Consensus_Plus
TB-mRNA_lincRNA_CNMF
TB-mRNA_Preprocess
TB-mRNA_protein_coding_Clustering_CNMF
TB-mRNA_protein_coding_Clustering_Consensus_Plus
TB-mRNAseq_Clustering_CNMF
TB-mRNAseq_Clustering_Consensus_Plus
TB-Mutation_APOBEC