taskACCBLCABRCACESCCHOLCOADCOADREADDLBCESCAFPPPGBMGBMLGGHNSCKICHKIPANKIRCKIRPLAMLLGGLIHCLUADLUSCMESOOVPAADPCPGPRADREADSARCSKCMSTADSTESTGCTTHCATHYMUCECUCSUVM
Aggregate_AnalysisFeatures
Aggregate_Gene_Status
Aggregate_Molecular_Subtype_Clusters
Append_CustomClinical
CoMut2.0
CoMut2CV
CoMutCV
CopyNumber_Clustering_CNMF
CopyNumber_Clustering_CNMF_thresholded
CopyNumber_Gistic2
CopyNumber_Gistic2_Postprocess_Focal
CopyNumberLowPass_Gistic2
Correlate_Clinical_vs_CopyNumber_Arm
Correlate_Clinical_vs_CopyNumber_Focal
Correlate_Clinical_vs_Methylation
Correlate_Clinical_vs_miR
Correlate_Clinical_vs_miRseq
Correlate_Clinical_vs_Molecular_Subtypes
Correlate_Clinical_vs_mRNA
Correlate_Clinical_vs_mRNAseq
Correlate_Clinical_vs_Mutation
Correlate_Clinical_vs_Mutation_APOBEC_Categorical
Correlate_Clinical_vs_Mutation_APOBEC_Continuous
Correlate_Clinical_vs_MutationRate
Correlate_Clinical_vs_RPPA
Correlate_CopyNumber_vs_miR
Correlate_CopyNumber_vs_mRNA
Correlate_CopyNumber_vs_mRNAseq
Correlate_Methylation_vs_mRNA
Correlate_molecularSubtype_vs_CopyNumber_Arm
Correlate_molecularSubtype_vs_CopyNumber_Focal
Correlate_molecularSubtype_vs_Mutation
Correlate_mRNAseq_vs_Mutation_APOBEC
GenerateStickFigures2.0
GenerateStickFigures2CV
GenerateStickFiguresCV
iClusterPlus
LegoPlotter2.0
LegoPlotter2CV
LegoPlotterCV
Methylation_Clustering_CNMF
miR_Clustering_CNMF
miR_Clustering_Consensus_Plus
miR_FindDirectTargets
miRseq_Clustering_CNMF
miRseq_Clustering_Consensus_Plus
miRseq_FindDirectTargets
miRseq_Mature_Clustering_CNMF
miRseq_Mature_Clustering_Consensus_Plus
mRNA_Clustering_CNMF
mRNA_Clustering_Consensus_Plus
mRNAseq_Clustering_CNMF
mRNAseq_Clustering_Consensus_Plus
Mutation_APOBEC
Mutation_Assessor
Mutation_CHASM
Mutation_CoOccurrence
Mutation_CoOccurrence_Custom
MutSigNozzleReport2.0
MutSigNozzleReport2CV
MutSigNozzleReportCV
MutSigPreprocess2.0
MutSigRun2.0
MutSigRun2CV
MutSigRunCV
Paradigm_mRNA
Paradigm_mRNA_And_CopyNumber
Paradigm_Prepare_mRNA
Paradigm_Prepare_mRNA_And_Copy_Number
Paradigm_Prepare_RNASeq
Paradigm_Prepare_RNASeq_And_Copy_Number
ParadigmPreprocess_mRNA
Paradigm_Preprocess_mRNA
Paradigm_Preprocess_mRNA_And_Copy_Number
ParadigmPreprocess_RNASeq
Paradigm_Preprocess_RNASeq
Paradigm_Preprocess_RNASeq_And_Copy_Number
Paradigm_Report_Preprocess_mRNA
Paradigm_Report_Preprocess_mRNA_And_CopyNumber
Paradigm_Report_Preprocess_RNASeq
Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
Paradigm_RNASeq
Paradigm_RNASeq_And_Copy_Number
Pathway_FindEnrichedGenes
Pathway_GSEA_mRNAseq
Pathway_Hotnet
Pathway_Overlaps_MSigDB_MutSig2CV
Pathway_Paradigm_mRNA
Pathway_Paradigm_mRNA_And_Copy_Number
Pathway_Paradigm_RNASeq
Pathway_Paradigm_RNASeq_And_Copy_Number
ProcessCoverageForMutSig2.0
RPPA_Clustering_CNMF
RPPA_Clustering_Consensus_Plus
TR-Aggregate_AnalysisFeatures
TR-Aggregate_Gene_Status
TR-Aggregate_Molecular_Subtype_Clusters
TR-Append_CustomClinical
TR-CoMut2.0
TR-CoMut2CV
TR-CoMutCV
TR-CopyNumber_Clustering_CNMF
TR-CopyNumber_Clustering_CNMF_thresholded
TR-CopyNumber_Gistic2
TR-CopyNumber_Gistic2_Postprocess_Focal
TR-CopyNumberLowPass_Gistic2
TR-Correlate_Clinical_vs_CopyNumber_Arm
TR-Correlate_Clinical_vs_CopyNumber_Focal
TR-Correlate_Clinical_vs_Methylation
TR-Correlate_Clinical_vs_miR
TR-Correlate_Clinical_vs_miRseq
TR-Correlate_Clinical_vs_Molecular_Subtypes
TR-Correlate_Clinical_vs_mRNA
TR-Correlate_Clinical_vs_mRNAseq
TR-Correlate_Clinical_vs_Mutation
TR-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
TR-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
TR-Correlate_Clinical_vs_MutationRate
TR-Correlate_Clinical_vs_RPPA
TR-Correlate_CopyNumber_vs_miR
TR-Correlate_CopyNumber_vs_mRNA
TR-Correlate_CopyNumber_vs_mRNAseq
TR-Correlate_Methylation_vs_mRNA
TR-Correlate_molecularSubtype_vs_CopyNumber_Arm
TR-Correlate_molecularSubtype_vs_CopyNumber_Focal
TR-Correlate_molecularSubtype_vs_Mutation
TR-Correlate_mRNAseq_vs_Mutation_APOBEC
TR-GenerateStickFigures2.0
TR-GenerateStickFigures2CV
TR-GenerateStickFiguresCV
TR-iClusterPlus
TR-LegoPlotter2.0
TR-LegoPlotter2CV
TR-LegoPlotterCV
TR-Methylation_Clustering_CNMF
TR-miR_Clustering_CNMF
TR-miR_Clustering_Consensus_Plus
TR-miR_FindDirectTargets
TR-miRseq_Clustering_CNMF
TR-miRseq_Clustering_Consensus_Plus
TR-miRseq_FindDirectTargets
TR-miRseq_Mature_Clustering_CNMF
TR-miRseq_Mature_Clustering_Consensus_Plus
TR-mRNA_Clustering_CNMF
TR-mRNA_Clustering_Consensus_Plus
TR-mRNAseq_Clustering_CNMF
TR-mRNAseq_Clustering_Consensus_Plus
TR-Mutation_APOBEC
TR-Mutation_Assessor
TR-Mutation_CHASM
TR-Mutation_CoOccurrence
TR-Mutation_CoOccurrence_Custom
TR-MutSigNozzleReport2.0
TR-MutSigNozzleReport2CV
TR-MutSigNozzleReportCV
TR-MutSigPreprocess2.0
TR-MutSigRun2.0
TR-MutSigRun2CV
TR-MutSigRunCV
TR-Paradigm_mRNA
TR-Paradigm_mRNA_And_CopyNumber
TR-Paradigm_Prepare_mRNA
TR-Paradigm_Prepare_mRNA_And_Copy_Number
TR-Paradigm_Prepare_RNASeq
TR-Paradigm_Prepare_RNASeq_And_Copy_Number
TR-Paradigm_Preprocess_mRNA
TR-ParadigmPreprocess_mRNA
TR-Paradigm_Preprocess_mRNA_And_Copy_Number
TR-ParadigmPreprocess_RNASeq
TR-Paradigm_Preprocess_RNASeq
TR-Paradigm_Preprocess_RNASeq_And_Copy_Number
TR-Paradigm_Report_Preprocess_mRNA
TR-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
TR-Paradigm_Report_Preprocess_RNASeq
TR-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
TR-Paradigm_RNASeq
TR-Paradigm_RNASeq_And_Copy_Number
TR-Pathway_FindEnrichedGenes
TR-Pathway_GSEA_mRNAseq
TR-Pathway_Hotnet
TR-Pathway_Overlaps_MSigDB_MutSig2CV
TR-Pathway_Paradigm_mRNA
TR-Pathway_Paradigm_mRNA_And_Copy_Number
TR-Pathway_Paradigm_RNASeq
TR-Pathway_Paradigm_RNASeq_And_Copy_Number
TR-ProcessCoverageForMutSig2.0
TR-RPPA_Clustering_CNMF
TR-RPPA_Clustering_Consensus_Plus
TP-Aggregate_AnalysisFeatures
TP-Aggregate_Gene_Status
TP-Aggregate_Molecular_Subtype_Clusters
TP-Append_CustomClinical
TP-CoMut2.0
TP-CoMut2CV
TP-CoMutCV
TP-CopyNumber_Clustering_CNMF
TP-CopyNumber_Clustering_CNMF_thresholded
TP-CopyNumber_Gistic2
TP-CopyNumber_Gistic2_Postprocess_Focal
TP-CopyNumberLowPass_Gistic2
TP-Correlate_Clinical_vs_CopyNumber_Arm
TP-Correlate_Clinical_vs_CopyNumber_Focal
TP-Correlate_Clinical_vs_Methylation
TP-Correlate_Clinical_vs_miR
TP-Correlate_Clinical_vs_miRseq
TP-Correlate_Clinical_vs_Molecular_Subtypes
TP-Correlate_Clinical_vs_mRNA
TP-Correlate_Clinical_vs_mRNAseq
TP-Correlate_Clinical_vs_Mutation
TP-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
TP-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
TP-Correlate_Clinical_vs_MutationRate
TP-Correlate_Clinical_vs_RPPA
TP-Correlate_CopyNumber_vs_miR
TP-Correlate_CopyNumber_vs_mRNA
TP-Correlate_CopyNumber_vs_mRNAseq
TP-Correlate_Methylation_vs_mRNA
TP-Correlate_molecularSubtype_vs_CopyNumber_Arm
TP-Correlate_molecularSubtype_vs_CopyNumber_Focal
TP-Correlate_molecularSubtype_vs_Mutation
TP-Correlate_mRNAseq_vs_Mutation_APOBEC
TP-GenerateStickFigures2.0
TP-GenerateStickFigures2CV
TP-GenerateStickFiguresCV
TP-iClusterPlus
TP-LegoPlotter2.0
TP-LegoPlotter2CV
TP-LegoPlotterCV
TP-Methylation_Clustering_CNMF
TP-miR_Clustering_CNMF
TP-miR_Clustering_Consensus_Plus
TP-miR_FindDirectTargets
TP-miRseq_Clustering_CNMF
TP-miRseq_Clustering_Consensus_Plus
TP-miRseq_FindDirectTargets
TP-miRseq_Mature_Clustering_CNMF
TP-miRseq_Mature_Clustering_Consensus_Plus
TP-mRNA_Clustering_CNMF
TP-mRNA_Clustering_Consensus_Plus
TP-mRNAseq_Clustering_CNMF
TP-mRNAseq_Clustering_Consensus_Plus
TP-Mutation_APOBEC
TP-Mutation_Assessor
TP-Mutation_CHASM
TP-Mutation_CoOccurrence
TP-Mutation_CoOccurrence_Custom
TP-MutSigNozzleReport2.0
TP-MutSigNozzleReport2CV
TP-MutSigNozzleReportCV
TP-MutSigPreprocess2.0
TP-MutSigRun2.0
TP-MutSigRun2CV
TP-MutSigRunCV
TP-Paradigm_mRNA
TP-Paradigm_mRNA_And_CopyNumber
TP-Paradigm_Prepare_mRNA
TP-Paradigm_Prepare_mRNA_And_Copy_Number
TP-Paradigm_Prepare_RNASeq
TP-Paradigm_Prepare_RNASeq_And_Copy_Number
TP-Paradigm_Preprocess_mRNA
TP-ParadigmPreprocess_mRNA
TP-Paradigm_Preprocess_mRNA_And_Copy_Number
TP-Paradigm_Preprocess_RNASeq
TP-ParadigmPreprocess_RNASeq
TP-Paradigm_Preprocess_RNASeq_And_Copy_Number
TP-Paradigm_Report_Preprocess_mRNA
TP-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
TP-Paradigm_Report_Preprocess_RNASeq
TP-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
TP-Paradigm_RNASeq
TP-Paradigm_RNASeq_And_Copy_Number
TP-Pathway_FindEnrichedGenes
TP-Pathway_GSEA_mRNAseq
TP-Pathway_Hotnet
TP-Pathway_Overlaps_MSigDB_MutSig2CV
TP-Pathway_Paradigm_mRNA
TP-Pathway_Paradigm_mRNA_And_Copy_Number
TP-Pathway_Paradigm_RNASeq
TP-Pathway_Paradigm_RNASeq_And_Copy_Number
TP-ProcessCoverageForMutSig2.0
TP-RPPA_Clustering_CNMF
TP-RPPA_Clustering_Consensus_Plus
TM-Aggregate_AnalysisFeatures
TM-Aggregate_Gene_Status
TM-Aggregate_Molecular_Subtype_Clusters
TM-Append_CustomClinical
TM-CoMut2.0
TM-CoMut2CV
TM-CoMutCV
TM-CopyNumber_Clustering_CNMF
TM-CopyNumber_Clustering_CNMF_thresholded
TM-CopyNumber_Gistic2
TM-CopyNumber_Gistic2_Postprocess_Focal
TM-CopyNumberLowPass_Gistic2
TM-Correlate_Clinical_vs_CopyNumber_Arm
TM-Correlate_Clinical_vs_CopyNumber_Focal
TM-Correlate_Clinical_vs_Methylation
TM-Correlate_Clinical_vs_miR
TM-Correlate_Clinical_vs_miRseq
TM-Correlate_Clinical_vs_Molecular_Subtypes
TM-Correlate_Clinical_vs_mRNA
TM-Correlate_Clinical_vs_mRNAseq
TM-Correlate_Clinical_vs_Mutation
TM-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
TM-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
TM-Correlate_Clinical_vs_MutationRate
TM-Correlate_Clinical_vs_RPPA
TM-Correlate_CopyNumber_vs_miR
TM-Correlate_CopyNumber_vs_mRNA
TM-Correlate_CopyNumber_vs_mRNAseq
TM-Correlate_Methylation_vs_mRNA
TM-Correlate_molecularSubtype_vs_CopyNumber_Arm
TM-Correlate_molecularSubtype_vs_CopyNumber_Focal
TM-Correlate_molecularSubtype_vs_Mutation
TM-Correlate_mRNAseq_vs_Mutation_APOBEC
TM-GenerateStickFigures2.0
TM-GenerateStickFigures2CV
TM-GenerateStickFiguresCV
TM-iClusterPlus
TM-LegoPlotter2.0
TM-LegoPlotter2CV
TM-LegoPlotterCV
TM-Methylation_Clustering_CNMF
TM-miR_Clustering_CNMF
TM-miR_Clustering_Consensus_Plus
TM-miR_FindDirectTargets
TM-miRseq_Clustering_CNMF
TM-miRseq_Clustering_Consensus_Plus
TM-miRseq_FindDirectTargets
TM-miRseq_Mature_Clustering_CNMF
TM-miRseq_Mature_Clustering_Consensus_Plus
TM-mRNA_Clustering_CNMF
TM-mRNA_Clustering_Consensus_Plus
TM-mRNAseq_Clustering_CNMF
TM-mRNAseq_Clustering_Consensus_Plus
TM-Mutation_APOBEC
TM-Mutation_Assessor
TM-Mutation_CHASM
TM-Mutation_CoOccurrence
TM-Mutation_CoOccurrence_Custom
TM-MutSigNozzleReport2.0
TM-MutSigNozzleReport2CV
TM-MutSigNozzleReportCV
TM-MutSigPreprocess2.0
TM-MutSigRun2.0
TM-MutSigRun2CV
TM-MutSigRunCV
TM-Paradigm_mRNA
TM-Paradigm_mRNA_And_CopyNumber
TM-Paradigm_Prepare_mRNA
TM-Paradigm_Prepare_mRNA_And_Copy_Number
TM-Paradigm_Prepare_RNASeq
TM-Paradigm_Prepare_RNASeq_And_Copy_Number
TM-Paradigm_Preprocess_mRNA
TM-ParadigmPreprocess_mRNA
TM-Paradigm_Preprocess_mRNA_And_Copy_Number
TM-ParadigmPreprocess_RNASeq
TM-Paradigm_Preprocess_RNASeq
TM-Paradigm_Preprocess_RNASeq_And_Copy_Number
TM-Paradigm_Report_Preprocess_mRNA
TM-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
TM-Paradigm_Report_Preprocess_RNASeq
TM-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
TM-Paradigm_RNASeq
TM-Paradigm_RNASeq_And_Copy_Number
TM-Pathway_FindEnrichedGenes
TM-Pathway_GSEA_mRNAseq
TM-Pathway_Hotnet
TM-Pathway_Overlaps_MSigDB_MutSig2CV
TM-Pathway_Paradigm_mRNA
TM-Pathway_Paradigm_mRNA_And_Copy_Number
TM-Pathway_Paradigm_RNASeq
TM-Pathway_Paradigm_RNASeq_And_Copy_Number
TM-ProcessCoverageForMutSig2.0
TM-RPPA_Clustering_CNMF
TM-RPPA_Clustering_Consensus_Plus
NT-Aggregate_AnalysisFeatures
NT-Aggregate_Gene_Status
NT-Aggregate_Molecular_Subtype_Clusters
NT-Append_CustomClinical
NT-CoMut2.0
NT-CoMut2CV
NT-CoMutCV
NT-CopyNumber_Clustering_CNMF
NT-CopyNumber_Clustering_CNMF_thresholded
NT-CopyNumber_Gistic2
NT-CopyNumber_Gistic2_Postprocess_Focal
NT-CopyNumberLowPass_Gistic2
NT-Correlate_Clinical_vs_CopyNumber_Arm
NT-Correlate_Clinical_vs_CopyNumber_Focal
NT-Correlate_Clinical_vs_Methylation
NT-Correlate_Clinical_vs_miR
NT-Correlate_Clinical_vs_miRseq
NT-Correlate_Clinical_vs_Molecular_Subtypes
NT-Correlate_Clinical_vs_mRNA
NT-Correlate_Clinical_vs_mRNAseq
NT-Correlate_Clinical_vs_Mutation
NT-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
NT-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
NT-Correlate_Clinical_vs_MutationRate
NT-Correlate_Clinical_vs_RPPA
NT-Correlate_CopyNumber_vs_miR
NT-Correlate_CopyNumber_vs_mRNA
NT-Correlate_CopyNumber_vs_mRNAseq
NT-Correlate_Methylation_vs_mRNA
NT-Correlate_molecularSubtype_vs_CopyNumber_Arm
NT-Correlate_molecularSubtype_vs_CopyNumber_Focal
NT-Correlate_molecularSubtype_vs_Mutation
NT-Correlate_mRNAseq_vs_Mutation_APOBEC
NT-GenerateStickFigures2.0
NT-GenerateStickFigures2CV
NT-GenerateStickFiguresCV
NT-iClusterPlus
NT-LegoPlotter2.0
NT-LegoPlotter2CV
NT-LegoPlotterCV
NT-Methylation_Clustering_CNMF
NT-miR_Clustering_CNMF
NT-miR_Clustering_Consensus_Plus
NT-miR_FindDirectTargets
NT-miRseq_Clustering_CNMF
NT-miRseq_Clustering_Consensus_Plus
NT-miRseq_FindDirectTargets
NT-miRseq_Mature_Clustering_CNMF
NT-miRseq_Mature_Clustering_Consensus_Plus
NT-mRNA_Clustering_CNMF
NT-mRNA_Clustering_Consensus_Plus
NT-mRNAseq_Clustering_CNMF
NT-mRNAseq_Clustering_Consensus_Plus
NT-Mutation_APOBEC
NT-Mutation_Assessor
NT-Mutation_CHASM
NT-Mutation_CoOccurrence
NT-Mutation_CoOccurrence_Custom
NT-MutSigNozzleReport2.0
NT-MutSigNozzleReport2CV
NT-MutSigNozzleReportCV
NT-MutSigPreprocess2.0
NT-MutSigRun2.0
NT-MutSigRun2CV
NT-MutSigRunCV
NT-Paradigm_mRNA
NT-Paradigm_mRNA_And_CopyNumber
NT-Paradigm_Prepare_mRNA
NT-Paradigm_Prepare_mRNA_And_Copy_Number
NT-Paradigm_Prepare_RNASeq
NT-Paradigm_Prepare_RNASeq_And_Copy_Number
NT-ParadigmPreprocess_mRNA
NT-Paradigm_Preprocess_mRNA
NT-Paradigm_Preprocess_mRNA_And_Copy_Number
NT-ParadigmPreprocess_RNASeq
NT-Paradigm_Preprocess_RNASeq
NT-Paradigm_Preprocess_RNASeq_And_Copy_Number
NT-Paradigm_Report_Preprocess_mRNA
NT-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
NT-Paradigm_Report_Preprocess_RNASeq
NT-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
NT-Paradigm_RNASeq
NT-Paradigm_RNASeq_And_Copy_Number
NT-Pathway_FindEnrichedGenes
NT-Pathway_GSEA_mRNAseq
NT-Pathway_Hotnet
NT-Pathway_Overlaps_MSigDB_MutSig2CV
NT-Pathway_Paradigm_mRNA
NT-Pathway_Paradigm_mRNA_And_Copy_Number
NT-Pathway_Paradigm_RNASeq
NT-Pathway_Paradigm_RNASeq_And_Copy_Number
NT-ProcessCoverageForMutSig2.0
NT-RPPA_Clustering_CNMF
NT-RPPA_Clustering_Consensus_Plus
NB-Aggregate_AnalysisFeatures
NB-Aggregate_Gene_Status
NB-Aggregate_Molecular_Subtype_Clusters
NB-Append_CustomClinical
NB-CoMut2.0
NB-CoMut2CV
NB-CoMutCV
NB-CopyNumber_Clustering_CNMF
NB-CopyNumber_Clustering_CNMF_thresholded
NB-CopyNumber_Gistic2
NB-CopyNumber_Gistic2_Postprocess_Focal
NB-CopyNumberLowPass_Gistic2
NB-Correlate_Clinical_vs_CopyNumber_Arm
NB-Correlate_Clinical_vs_CopyNumber_Focal
NB-Correlate_Clinical_vs_Methylation
NB-Correlate_Clinical_vs_miR
NB-Correlate_Clinical_vs_miRseq
NB-Correlate_Clinical_vs_Molecular_Subtypes
NB-Correlate_Clinical_vs_mRNA
NB-Correlate_Clinical_vs_mRNAseq
NB-Correlate_Clinical_vs_Mutation
NB-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
NB-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
NB-Correlate_Clinical_vs_MutationRate
NB-Correlate_Clinical_vs_RPPA
NB-Correlate_CopyNumber_vs_miR
NB-Correlate_CopyNumber_vs_mRNA
NB-Correlate_CopyNumber_vs_mRNAseq
NB-Correlate_Methylation_vs_mRNA
NB-Correlate_molecularSubtype_vs_CopyNumber_Arm
NB-Correlate_molecularSubtype_vs_CopyNumber_Focal
NB-Correlate_molecularSubtype_vs_Mutation
NB-Correlate_mRNAseq_vs_Mutation_APOBEC
NB-GenerateStickFigures2.0
NB-GenerateStickFigures2CV
NB-GenerateStickFiguresCV
NB-iClusterPlus
NB-LegoPlotter2.0
NB-LegoPlotter2CV
NB-LegoPlotterCV
NB-Methylation_Clustering_CNMF
NB-miR_Clustering_CNMF
NB-miR_Clustering_Consensus_Plus
NB-miR_FindDirectTargets
NB-miRseq_Clustering_CNMF
NB-miRseq_Clustering_Consensus_Plus
NB-miRseq_FindDirectTargets
NB-miRseq_Mature_Clustering_CNMF
NB-miRseq_Mature_Clustering_Consensus_Plus
NB-mRNA_Clustering_CNMF
NB-mRNA_Clustering_Consensus_Plus
NB-mRNAseq_Clustering_CNMF
NB-mRNAseq_Clustering_Consensus_Plus
NB-Mutation_APOBEC
NB-Mutation_Assessor
NB-Mutation_CHASM
NB-Mutation_CoOccurrence
NB-Mutation_CoOccurrence_Custom
NB-MutSigNozzleReport2.0
NB-MutSigNozzleReport2CV
NB-MutSigNozzleReportCV
NB-MutSigPreprocess2.0
NB-MutSigRun2.0
NB-MutSigRun2CV
NB-MutSigRunCV
NB-Paradigm_mRNA
NB-Paradigm_mRNA_And_CopyNumber
NB-Paradigm_Prepare_mRNA
NB-Paradigm_Prepare_mRNA_And_Copy_Number
NB-Paradigm_Prepare_RNASeq
NB-Paradigm_Prepare_RNASeq_And_Copy_Number
NB-Paradigm_Preprocess_mRNA
NB-ParadigmPreprocess_mRNA
NB-Paradigm_Preprocess_mRNA_And_Copy_Number
NB-Paradigm_Preprocess_RNASeq
NB-ParadigmPreprocess_RNASeq
NB-Paradigm_Preprocess_RNASeq_And_Copy_Number
NB-Paradigm_Report_Preprocess_mRNA
NB-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
NB-Paradigm_Report_Preprocess_RNASeq
NB-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
NB-Paradigm_RNASeq
NB-Paradigm_RNASeq_And_Copy_Number
NB-Pathway_FindEnrichedGenes
NB-Pathway_GSEA_mRNAseq
NB-Pathway_Hotnet
NB-Pathway_Overlaps_MSigDB_MutSig2CV
NB-Pathway_Paradigm_mRNA
NB-Pathway_Paradigm_mRNA_And_Copy_Number
NB-Pathway_Paradigm_RNASeq
NB-Pathway_Paradigm_RNASeq_And_Copy_Number
NB-ProcessCoverageForMutSig2.0
NB-RPPA_Clustering_CNMF
NB-RPPA_Clustering_Consensus_Plus
FFPE-Aggregate_AnalysisFeatures
FFPE-Aggregate_Gene_Status
FFPE-Aggregate_Molecular_Subtype_Clusters
FFPE-Append_CustomClinical
FFPE-CoMut2.0
FFPE-CoMut2CV
FFPE-CoMutCV
FFPE-CopyNumber_Clustering_CNMF
FFPE-CopyNumber_Clustering_CNMF_thresholded
FFPE-CopyNumber_Gistic2
FFPE-CopyNumber_Gistic2_Postprocess_Focal
FFPE-CopyNumberLowPass_Gistic2
FFPE-Correlate_Clinical_vs_CopyNumber_Arm
FFPE-Correlate_Clinical_vs_CopyNumber_Focal
FFPE-Correlate_Clinical_vs_Methylation
FFPE-Correlate_Clinical_vs_miR
FFPE-Correlate_Clinical_vs_miRseq
FFPE-Correlate_Clinical_vs_Molecular_Subtypes
FFPE-Correlate_Clinical_vs_mRNA
FFPE-Correlate_Clinical_vs_mRNAseq
FFPE-Correlate_Clinical_vs_Mutation
FFPE-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
FFPE-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
FFPE-Correlate_Clinical_vs_MutationRate
FFPE-Correlate_Clinical_vs_RPPA
FFPE-Correlate_CopyNumber_vs_miR
FFPE-Correlate_CopyNumber_vs_mRNA
FFPE-Correlate_CopyNumber_vs_mRNAseq
FFPE-Correlate_Methylation_vs_mRNA
FFPE-Correlate_molecularSubtype_vs_CopyNumber_Arm
FFPE-Correlate_molecularSubtype_vs_CopyNumber_Focal
FFPE-Correlate_molecularSubtype_vs_Mutation
FFPE-Correlate_mRNAseq_vs_Mutation_APOBEC
FFPE-GenerateStickFigures2.0
FFPE-GenerateStickFigures2CV
FFPE-GenerateStickFiguresCV
FFPE-iClusterPlus
FFPE-LegoPlotter2.0
FFPE-LegoPlotter2CV
FFPE-LegoPlotterCV
FFPE-Methylation_Clustering_CNMF
FFPE-miR_Clustering_CNMF
FFPE-miR_Clustering_Consensus_Plus
FFPE-miR_FindDirectTargets
FFPE-miRseq_Clustering_CNMF
FFPE-miRseq_Clustering_Consensus_Plus
FFPE-miRseq_FindDirectTargets
FFPE-miRseq_Mature_Clustering_CNMF
FFPE-miRseq_Mature_Clustering_Consensus_Plus
FFPE-mRNA_Clustering_CNMF
FFPE-mRNA_Clustering_Consensus_Plus
FFPE-mRNAseq_Clustering_CNMF
FFPE-mRNAseq_Clustering_Consensus_Plus
FFPE-Mutation_APOBEC
FFPE-Mutation_Assessor
FFPE-Mutation_CHASM
FFPE-Mutation_CoOccurrence
FFPE-Mutation_CoOccurrence_Custom
FFPE-MutSigNozzleReport2.0
FFPE-MutSigNozzleReport2CV
FFPE-MutSigNozzleReportCV
FFPE-MutSigPreprocess2.0
FFPE-MutSigRun2.0
FFPE-MutSigRun2CV
FFPE-MutSigRunCV
FFPE-Paradigm_mRNA
FFPE-Paradigm_mRNA_And_CopyNumber
FFPE-Paradigm_Prepare_mRNA