| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LUAD/856399/0.GDAC_clinicalDataMerger.Finished/LUAD.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/clinical/2012_02_14/stage3_params_clin_luad.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | LUAD |
| Execution Times: | |
| Submitted: | 07:03:31 21-02-12 |
| Completed: | |
| Elapsed: | 00 hrs 00 mins 44 secs |
step 1. GDAC_clinicalDataPicker [id: 55850] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LUAD/856399/0.GDAC_clinicalDataMerger.Finished/LUAD.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/clinical/2012_02_14/stage3_params_clin_luad.tsv |
| nodeColumn | 1 |
| outPrefix | LUAD |
| Output Files: | |
| LUAD.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 07:03:31 21-02-12 |
| Completed: | 07:03:59 21-02-12 |
| Elapsed: | 00 hrs 00 mins 27 secs |
step 2. GDAC_clinicalDataPickerReport [id: 55851] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:43
| picked | LUAD.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 07:03:31 21-02-12 |
| Completed: | 07:04:14 21-02-12 |
| Elapsed: | 00 hrs 00 mins 42 secs |