Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
MKI67	4288	broad.mit.edu	37	10	129903918	129903918	+	Nonsense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FAM23A	653567	broad.mit.edu	37	10	17813344	17813344	+	Silent	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72520559	72520559	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ADK	132	broad.mit.edu	37	10	76285071	76285071	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105774631	105774631	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GALNTL4	374378	broad.mit.edu	37	11	11394086	11394086	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
OR8H1	219469	broad.mit.edu	37	11	56058521	56058521	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CCDC88B	283234	broad.mit.edu	37	11	64123092	64123092	+	Missense_Mutation	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SIPA1	6494	broad.mit.edu	37	11	65417472	65417472	+	Nonsense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TSKU	25987	broad.mit.edu	37	11	76506922	76506922	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TXNRD1	7296	broad.mit.edu	37	12	104682767	104682767	+	Silent	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
APPL2	55198	broad.mit.edu	37	12	105601773	105601773	+	Silent	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TCP11L2	255394	broad.mit.edu	37	12	106712243	106712243	+	Splice_Site	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GPN3	51184	broad.mit.edu	37	12	110906002	110906002	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122825944	122825944	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
HIP1R	9026	broad.mit.edu	37	12	123342728	123342728	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SPATS2	65244	broad.mit.edu	37	12	49888683	49888683	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SPATS2	65244	broad.mit.edu	37	12	49888713	49888713	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
OR6C70	390327	broad.mit.edu	37	12	55863607	55863607	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57596297	57596297	+	Missense_Mutation	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20041439	20041439	+	Silent	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23929791	23929791	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32914782	32914782	+	Missense_Mutation	SNP	C	T	T	rs80358866		TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
THSD1	55901	broad.mit.edu	37	13	52971455	52971455	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
OLFM4	10562	broad.mit.edu	37	13	53624617	53624617	+	Missense_Mutation	SNP	T	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94197591	94197591	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RNF113B	140432	broad.mit.edu	37	13	98828998	98828998	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528885	20528885	+	Missense_Mutation	SNP	A	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GZMB	3002	broad.mit.edu	37	14	25101305	25101305	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ACTR10	55860	broad.mit.edu	37	14	58698862	58698862	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64514796	64514796	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64519446	64519446	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65253698	65253698	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70490103	70490103	+	Silent	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
C14orf43	91748	broad.mit.edu	37	14	74194193	74194193	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102211921	102211921	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
OTUD7A	161725	broad.mit.edu	37	15	31795993	31795993	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34105682	34105682	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54306223	54306223	+	Nonsense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54306931	54306931	+	Nonsense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SNX22	79856	broad.mit.edu	37	15	64446670	64446670	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
LBXCOR1	390598	broad.mit.edu	37	15	68121571	68121571	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72338071	72338071	+	Silent	SNP	T	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MAN2A2	4122	broad.mit.edu	37	15	91448546	91448546	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PTX4	390667	broad.mit.edu	37	16	1535988	1535988	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CDR2	1039	broad.mit.edu	37	16	22385609	22385609	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
LAT	27040	broad.mit.edu	37	16	28997204	28997204	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72984605	72984605	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10369690	10369690	+	Missense_Mutation	SNP	G	A	A	rs112133139		TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10411687	10411687	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11622799	11622799	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FBXW10	10517	broad.mit.edu	37	17	18659367	18659367	+	Missense_Mutation	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PIGW	284098	broad.mit.edu	37	17	34893433	34893433	+	Silent	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CNTNAP1	8506	broad.mit.edu	37	17	40837383	40837383	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
NBR1	4077	broad.mit.edu	37	17	41342744	41342744	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RNFT1	51136	broad.mit.edu	37	17	58040312	58040312	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ARSG	22901	broad.mit.edu	37	17	66366656	66366656	+	Missense_Mutation	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RPRD1A	55197	broad.mit.edu	37	18	33606928	33606928	+	Silent	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
KIAA1468	57614	broad.mit.edu	37	18	59949606	59949606	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
LDLR	3949	broad.mit.edu	37	19	11224428	11224428	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
DNAJB1	3337	broad.mit.edu	37	19	14626877	14626877	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PLAUR	5329	broad.mit.edu	37	19	44169567	44169567	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PLAUR	5329	broad.mit.edu	37	19	44169588	44169588	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44471003	44471003	+	Missense_Mutation	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CACNG8	59283	broad.mit.edu	37	19	54483190	54483190	+	Missense_Mutation	SNP	T	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PTPN22	26191	broad.mit.edu	37	1	114372254	114372254	+	Missense_Mutation	SNP	T	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145534100	145534100	+	Silent	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
S100A8	6279	broad.mit.edu	37	1	153362976	153362976	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SCAMP3	10067	broad.mit.edu	37	1	155226117	155226117	+	Missense_Mutation	SNP	C	T	T	rs2990233		TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CCT3	7203	broad.mit.edu	37	1	156281973	156281973	+	Silent	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156647053	156647053	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PVRL4	81607	broad.mit.edu	37	1	161047356	161047356	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171154946	171154946	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
C1orf9	51430	broad.mit.edu	37	1	172558229	172558229	+	Missense_Mutation	SNP	A	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183209495	183209495	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
KIAA0090	23065	broad.mit.edu	37	1	19549914	19549914	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
NVL	4931	broad.mit.edu	37	1	224492852	224492852	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SDCCAG8	10806	broad.mit.edu	37	1	243471361	243471361	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551039	248551039	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
COL9A2	1298	broad.mit.edu	37	1	40766912	40766912	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44474107	44474107	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
HSPB11	51668	broad.mit.edu	37	1	54395807	54395807	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GZF1	64412	broad.mit.edu	37	20	23351021	23351021	+	Silent	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33577935	33577935	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SRC	6714	broad.mit.edu	37	20	36012573	36012573	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
LPIN3	64900	broad.mit.edu	37	20	39986944	39986944	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ZNF335	63925	broad.mit.edu	37	20	44579219	44579219	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
LRRN4	164312	broad.mit.edu	37	20	6031458	6031458	+	Missense_Mutation	SNP	T	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TCFL5	10732	broad.mit.edu	37	20	61490866	61490866	+	Missense_Mutation	SNP	A	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
OPRL1	4987	broad.mit.edu	37	20	62724217	62724217	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
KRTAP21-1	337977	broad.mit.edu	37	21	32127524	32127524	+	Missense_Mutation	SNP	T	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
KRTAP12-3	386683	broad.mit.edu	37	21	46078007	46078007	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FBXO7	25793	broad.mit.edu	37	22	32889255	32889255	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TRIOBP	11078	broad.mit.edu	37	22	38119996	38119996	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128345985	128345985	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160033027	160033027	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1652125	1652125	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182359492	182359492	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182359515	182359515	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PMS1	5378	broad.mit.edu	37	2	190719590	190719590	+	Missense_Mutation	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198265453	198265453	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200137185	200137185	+	Nonsense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219290520	219290520	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SLC23A3	151295	broad.mit.edu	37	2	220034109	220034109	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
OBSL1	23363	broad.mit.edu	37	2	220422740	220422740	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CAPN10	11132	broad.mit.edu	37	2	241536312	241536312	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
C2orf44	80304	broad.mit.edu	37	2	24253912	24253912	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61415533	61415533	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61607465	61607465	+	Nonsense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MOGS	7841	broad.mit.edu	37	2	74690357	74690357	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
HEG1	57493	broad.mit.edu	37	3	124748215	124748215	+	Missense_Mutation	SNP	T	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1363500	1363500	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PLSCR4	57088	broad.mit.edu	37	3	145917695	145917695	+	Missense_Mutation	SNP	G	A	A	rs34036393		TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ECE2	9718	broad.mit.edu	37	3	184009213	184009213	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195477929	195477929	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
EFHB	151651	broad.mit.edu	37	3	19938244	19938244	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RAB5A	5868	broad.mit.edu	37	3	20019815	20019815	+	Missense_Mutation	SNP	A	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
QARS	5859	broad.mit.edu	37	3	49135633	49135633	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MST1	4485	broad.mit.edu	37	3	49721756	49721756	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49736242	49736242	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
AMIGO3	386724	broad.mit.edu	37	3	49756064	49756064	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GNAT1	2779	broad.mit.edu	37	3	50231195	50231195	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CACNA2D2	9254	broad.mit.edu	37	3	50402325	50402325	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114251495	114251495	+	Silent	SNP	T	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155160322	155160322	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GUCY1A3	2982	broad.mit.edu	37	4	156634276	156634276	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164534483	164534483	+	Silent	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FBXO8	26269	broad.mit.edu	37	4	175158643	175158643	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
HELT	391723	broad.mit.edu	37	4	185941788	185941788	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
POLN	353497	broad.mit.edu	37	4	2130948	2130948	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SEL1L3	23231	broad.mit.edu	37	4	25806347	25806347	+	Nonsense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
HGFAC	3083	broad.mit.edu	37	4	3451002	3451002	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CNGA1	1259	broad.mit.edu	37	4	47939675	47939675	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66201800	66201800	+	Missense_Mutation	SNP	A	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
USO1	8615	broad.mit.edu	37	4	76692248	76692248	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
BMP2K	55589	broad.mit.edu	37	4	79763561	79763561	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SNCAIP	9627	broad.mit.edu	37	5	121786336	121786336	+	Silent	SNP	T	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PDLIM4	8572	broad.mit.edu	37	5	131607548	131607548	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SEC24A	10802	broad.mit.edu	37	5	134041037	134041037	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SEC24A	10802	broad.mit.edu	37	5	134041067	134041067	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13865842	13865842	+	Silent	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PCDHB1	29930	broad.mit.edu	37	5	140432966	140432966	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140712541	140712541	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PCDHGB2	56103	broad.mit.edu	37	5	140741617	140741617	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GPR151	134391	broad.mit.edu	37	5	145895383	145895383	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167689593	167689593	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176522356	176522356	+	Silent	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32090257	32090257	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66462291	66462291	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MCM9	254394	broad.mit.edu	37	6	119232920	119232920	+	Silent	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PTPRK	5796	broad.mit.edu	37	6	128411080	128411080	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146350852	146350852	+	Missense_Mutation	SNP	T	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
NUP153	9972	broad.mit.edu	37	6	17675597	17675597	+	Missense_Mutation	SNP	T	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
HIST1H3F	8968	broad.mit.edu	37	6	26250692	26250692	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TRIM26	7726	broad.mit.edu	37	6	30154266	30154266	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RIPK1	8737	broad.mit.edu	37	6	3104493	3104493	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32169171	32169171	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FAM50B	26240	broad.mit.edu	37	6	3850910	3850910	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TRERF1	55809	broad.mit.edu	37	6	42236137	42236137	+	Nonsense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ABCC10	89845	broad.mit.edu	37	6	43412531	43412531	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
XPO5	57510	broad.mit.edu	37	6	43538336	43538336	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100682744	100682744	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120740100	120740100	+	Silent	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131910975	131910975	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
DENND2A	27147	broad.mit.edu	37	7	140301874	140301874	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
C7orf27	221927	broad.mit.edu	37	7	2586960	2586960	+	Nonsense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	3681698	3681698	+	Missense_Mutation	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RADIL	55698	broad.mit.edu	37	7	4845343	4845343	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	69583197	69583197	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94047865	94047865	+	Splice_Site	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77776627	77776627	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ESRP1	54845	broad.mit.edu	37	8	95674784	95674784	+	Splice_Site	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101258739	101258739	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
IKBKAP	8518	broad.mit.edu	37	9	111679867	111679867	+	Missense_Mutation	SNP	T	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ZNF883	169834	broad.mit.edu	37	9	115759604	115759604	+	Missense_Mutation	SNP	C	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116931561	116931561	+	Missense_Mutation	SNP	A	G	G			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117849019	117849019	+	Missense_Mutation	SNP	A	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	121930487	121930487	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CIZ1	25792	broad.mit.edu	37	9	130928556	130928556	+	Nonsense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
CRAT	1384	broad.mit.edu	37	9	131860642	131860642	+	Missense_Mutation	SNP	T	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MED22	6837	broad.mit.edu	37	9	136211045	136211045	+	Silent	SNP	G	C	C			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
KIAA1984	84960	broad.mit.edu	37	9	139702037	139702037	+	Silent	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
NDOR1	27158	broad.mit.edu	37	9	140109624	140109624	+	Silent	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SLC34A3	142680	broad.mit.edu	37	9	140127042	140127042	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140707963	140707963	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32544237	32544237	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32544239	32544239	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ANKRD20A3	441425	broad.mit.edu	37	9	67938633	67938633	+	Missense_Mutation	SNP	G	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
PSAT1	29968	broad.mit.edu	37	9	80921289	80921289	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
IPPK	64768	broad.mit.edu	37	9	95397569	95397569	+	Missense_Mutation	SNP	G	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
DCAF12L1	139170	broad.mit.edu	37	X	125686549	125686549	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
RBMX	27316	broad.mit.edu	37	X	135957326	135957326	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27999131	27999131	+	Missense_Mutation	SNP	C	T	T			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FGD1	2245	broad.mit.edu	37	X	54496454	54496454	+	Missense_Mutation	SNP	C	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
SATL1	340562	broad.mit.edu	37	X	84363234	84363234	+	Silent	SNP	G	A	A	rs111730253		TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
MICALCL	84953	broad.mit.edu	37	11	12316387	12316389	+	In_Frame_Del	DEL	CTA	-	-	rs3812754	byFrequency;by1000genomes	TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
B3GNT9	84752	broad.mit.edu	37	16	67184256	67184256	+	Frame_Shift_Del	DEL	C	-	-			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
LRFN3	79414	broad.mit.edu	37	19	36431511	36431517	+	Frame_Shift_Del	DEL	CCAGCTG	-	-			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27099309	27099309	+	Frame_Shift_Del	DEL	C	-	-			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
FIGN	55137	broad.mit.edu	37	2	164467360	164467361	+	Frame_Shift_Ins	INS	-	A	A			TCGA-BL-A0C8-01	TCGA-BL-A0C8-01									Somatic	Phase_I	Capture				Illumina GAIIx
