Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
C1orf168	199920	genome.wustl.edu	37	1	57209923	57209923	+	Silent	SNP	A	A	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLCA3P	9629	genome.wustl.edu	37	1	87100062	87100062	+	RNA	SNP	A	A	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF281	23528	genome.wustl.edu	37	1	200378328	200378328	+	Missense_Mutation	SNP	C	C	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644604	644604	genome.wustl.edu	37	2	107314512	107314512	+	RNA	SNP	T	T	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCL2L11	10018	genome.wustl.edu	37	2	111921737	111921737	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL4A4	1286	genome.wustl.edu	37	2	227876939	227876939	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266101	41266101	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDAD1	55153	genome.wustl.edu	37	4	76877148	76877148	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASP6	839	genome.wustl.edu	37	4	110617581	110617581	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR3	7098	genome.wustl.edu	37	4	187004556	187004556	+	Silent	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIML1	339976	genome.wustl.edu	37	4	189063618	189063618	+	Silent	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK1	5122	genome.wustl.edu	37	5	95728961	95728961	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAMPT	10135	genome.wustl.edu	37	7	105909635	105909635	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCND2	3751	genome.wustl.edu	37	7	119914984	119914984	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPA6	57094	genome.wustl.edu	37	8	68346315	68346315	+	Silent	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNQ3	3786	genome.wustl.edu	37	8	133150135	133150135	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGFBPL1	347252	genome.wustl.edu	37	9	38414130	38414130	+	Missense_Mutation	SNP	T	T	G			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDUFA8	4702	genome.wustl.edu	37	9	124914687	124914687	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RUFY2	55680	genome.wustl.edu	37	10	70161411	70161411	+	Missense_Mutation	SNP	T	T	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89685303	89685303	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Missense_Mutation	SNP	C	C	G			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNBP4	23360	genome.wustl.edu	37	11	47746246	47746246	+	Nonsense_Mutation	SNP	G	G	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5M11	219487	genome.wustl.edu	37	11	56310354	56310354	+	Missense_Mutation	SNP	T	T	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM132D	121256	genome.wustl.edu	37	12	129566529	129566529	+	Silent	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED4	29079	genome.wustl.edu	37	13	48660552	48660552	+	Missense_Mutation	SNP	G	G	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COCH	1690	genome.wustl.edu	37	14	31355228	31355228	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIF1A	3091	genome.wustl.edu	37	14	62187113	62187113	+	Missense_Mutation	SNP	C	C	G			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNORD116-1	100033413	genome.wustl.edu	37	15	25296694	25296694	+	RNA	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACSM1	116285	genome.wustl.edu	37	16	20651860	20651860	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHBG	6462	genome.wustl.edu	37	17	7534600	7534600	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX2	55852	genome.wustl.edu	37	17	62290264	62290264	+	Silent	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf39	126074	genome.wustl.edu	37	19	11486286	11486286	+	Missense_Mutation	SNP	T	T	G			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF626	199777	genome.wustl.edu	37	19	20829139	20829139	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARFGEF2	10564	genome.wustl.edu	37	20	47641925	47641925	+	Missense_Mutation	SNP	C	C	G			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198886	0	genome.wustl.edu	37	MT	11875	11875	+	Silent	SNP	T	T	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198786	0	genome.wustl.edu	37	MT	13531	13531	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM48B2	170067	genome.wustl.edu	37	X	24330460	24330460	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSX1	6756	genome.wustl.edu	37	X	48123284	48123284	+	Missense_Mutation	SNP	A	A	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITIH5L	347365	genome.wustl.edu	37	X	54817288	54817288	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP7A	538	genome.wustl.edu	37	X	77276503	77276503	+	Missense_Mutation	SNP	T	T	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSPAN6	7105	genome.wustl.edu	37	X	99889014	99889014	+	Missense_Mutation	SNP	A	A	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LDOC1	23641	genome.wustl.edu	37	X	140271162	140271162	+	Silent	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179464474	179464474	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC642909	642909	genome.wustl.edu	37	5	97912107	97912107	+	RNA	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAMD9L	219285	genome.wustl.edu	37	7	92763041	92763041	+	Silent	SNP	G	G	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63852262	63852262	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF440	126070	genome.wustl.edu	37	19	11942913	11942913	+	Missense_Mutation	SNP	A	A	T			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP4F2	8529	genome.wustl.edu	37	19	16001182	16001182	+	Missense_Mutation	SNP	C	C	A			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591270	67591271	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASP1	834	genome.wustl.edu	37	11	104905837	104905837	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000201075	0	genome.wustl.edu	37	16	14369420	14369421	+	RNA	INS	-	-	C			TCGA-A5-A0GU-01	TCGA-A5-A0GU-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
