Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
EXOSC10	5394	genome.wustl.edu	37	1	11158135	11158135	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PUM1	9698	genome.wustl.edu	37	1	31465245	31465245	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL16A1	1307	genome.wustl.edu	37	1	32157635	32157635	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP33	23032	genome.wustl.edu	37	1	78207369	78207369	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPYD	1806	genome.wustl.edu	37	1	98058899	98058899	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STXBP3	6814	genome.wustl.edu	37	1	109340814	109340814	+	Silent	SNP	T	T	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCL2L15	440603	genome.wustl.edu	37	1	114429241	114429241	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP350	9857	genome.wustl.edu	37	1	180000560	180000560	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPR	7175	genome.wustl.edu	37	1	186331435	186331435	+	Silent	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERTAD4	56256	genome.wustl.edu	37	1	210415592	210415592	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644006	644006	genome.wustl.edu	37	1	231157656	231157656	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APOB	338	genome.wustl.edu	37	2	21235038	21235038	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATAD2B	54454	genome.wustl.edu	37	2	24033196	24033196	+	Nonsense_Mutation	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OTOF	9381	genome.wustl.edu	37	2	26725223	26725223	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BIRC6	57448	genome.wustl.edu	37	2	32733118	32733118	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP19	10869	genome.wustl.edu	37	3	49154344	49154344	+	Silent	SNP	C	C	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLMAP	7871	genome.wustl.edu	37	3	57857375	57857375	+	Nonsense_Mutation	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATXN7	6314	genome.wustl.edu	37	3	63973759	63973759	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLQ	10721	genome.wustl.edu	37	3	121200581	121200581	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPHP3	27031	genome.wustl.edu	37	3	132413683	132413683	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PEX5L	51555	genome.wustl.edu	37	3	179576911	179576911	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXW7	55294	genome.wustl.edu	37	4	153249384	153249384	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STOX2	56977	genome.wustl.edu	37	4	184938282	184938282	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LPCAT1	79888	genome.wustl.edu	37	5	1463855	1463855	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAI14	26064	genome.wustl.edu	37	5	34824014	34824014	+	Silent	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VCAN	1462	genome.wustl.edu	37	5	82815532	82815532	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB16	57717	genome.wustl.edu	37	5	140562499	140562499	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR12D3	81797	genome.wustl.edu	37	6	29236369	29236369	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOTCH4	4855	genome.wustl.edu	37	6	32163293	32163293	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RING1	6015	genome.wustl.edu	37	6	33178980	33178980	+	Silent	SNP	A	A	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIK2	2898	genome.wustl.edu	37	6	102503408	102503408	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL10A1	1300	genome.wustl.edu	37	6	116442361	116442361	+	Silent	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K5	4217	genome.wustl.edu	37	6	136972140	136972140	+	Silent	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UTRN	7402	genome.wustl.edu	37	6	144835132	144835132	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYTL3	94120	genome.wustl.edu	37	6	159084345	159084345	+	Silent	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNDC1	84624	genome.wustl.edu	37	6	159650865	159650865	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCIN	85477	genome.wustl.edu	37	7	12689092	12689092	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSPO	23145	genome.wustl.edu	37	7	149492657	149492657	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABP1	26	genome.wustl.edu	37	7	150554356	150554356	+	Silent	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD3	114788	genome.wustl.edu	37	8	113293531	113293531	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD3	114788	genome.wustl.edu	37	8	114111160	114111160	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UGCG	7357	genome.wustl.edu	37	9	114695230	114695230	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645954	645954	genome.wustl.edu	37	10	31001498	31001498	+	RNA	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC20	55222	genome.wustl.edu	37	10	72061120	72061120	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLCE1	51196	genome.wustl.edu	37	10	95790936	95790936	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOLC1	9221	genome.wustl.edu	37	10	103917208	103917208	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM160B1	57700	genome.wustl.edu	37	10	116606408	116606408	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRJ	5795	genome.wustl.edu	37	11	48146705	48146705	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf9	745	genome.wustl.edu	37	11	61539128	61539128	+	Silent	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A25	387601	genome.wustl.edu	37	11	62995935	62995935	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYVN1	84447	genome.wustl.edu	37	11	64900985	64900985	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF214	257160	genome.wustl.edu	37	11	117152119	117152119	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD4	1108	genome.wustl.edu	37	12	6701600	6701600	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCRS1	10445	genome.wustl.edu	37	12	49953511	49953511	+	Splice_Site	SNP	C	C	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACVR1B	91	genome.wustl.edu	37	12	52379078	52379078	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCT2	10576	genome.wustl.edu	37	12	69990984	69990984	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKAB1	5564	genome.wustl.edu	37	12	120110179	120110179	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC43	254050	genome.wustl.edu	37	12	122670797	122670797	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC15	29103	genome.wustl.edu	37	13	43643082	43643082	+	Silent	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNORD114-25	767605	genome.wustl.edu	37	14	101452443	101452443	+	RNA	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC653073	653073	genome.wustl.edu	37	15	30384246	30384246	+	Silent	SNP	A	A	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIPC	3990	genome.wustl.edu	37	15	58840773	58840773	+	Splice_Site	SNP	T	T	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIN2A	2903	genome.wustl.edu	37	16	10274194	10274194	+	Silent	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH11	4629	genome.wustl.edu	37	16	15813109	15813109	+	Silent	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTF3C1	2975	genome.wustl.edu	37	16	27503657	27503657	+	Splice_Site	SNP	A	A	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HYDIN	54768	genome.wustl.edu	37	16	71098642	71098642	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFHX3	463	genome.wustl.edu	37	16	72821683	72821683	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7578235	7578235	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACSF2	80221	genome.wustl.edu	37	17	48539624	48539624	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX14	56155	genome.wustl.edu	37	17	56676936	56676936	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF431	170959	genome.wustl.edu	37	19	21365601	21365601	+	Silent	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF99	7652	genome.wustl.edu	37	19	22940411	22940411	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LTBP4	8425	genome.wustl.edu	37	19	41118087	41118087	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP35	2909	genome.wustl.edu	37	19	47423229	47423229	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK2	5126	genome.wustl.edu	37	20	17434477	17434477	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000211459	0	genome.wustl.edu	37	MT	1199	1199	+	RNA	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210140	0	genome.wustl.edu	37	MT	5791	5791	+	RNA	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210151	0	genome.wustl.edu	37	MT	7453	7453	+	RNA	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198840	0	genome.wustl.edu	37	MT	10098	10098	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198786	0	genome.wustl.edu	37	MT	13281	13281	+	Silent	SNP	T	T	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HEPH	9843	genome.wustl.edu	37	X	65409629	65409629	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AWAT2	158835	genome.wustl.edu	37	X	69263462	69263462	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX11	56159	genome.wustl.edu	37	X	69945133	69945133	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM45B	55855	genome.wustl.edu	37	X	129630392	129630392	+	RNA	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FATE1	89885	genome.wustl.edu	37	X	150885858	150885858	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSCN	84033	genome.wustl.edu	37	1	228461239	228461239	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC20	200958	genome.wustl.edu	37	3	195460044	195460044	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A05A-01	TCGA-AP-A05A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251402	0	genome.wustl.edu	37	8	12273070	12273070	+	RNA	SNP	G	G	C			TCGA-AP-A05A-01	TCGA-AP-A05A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXA2	3170	genome.wustl.edu	37	20	22562814	22562824	+	Frame_Shift_Del	DEL	GCAGGTGGGCC	GCAGGTGGGCC	-			TCGA-AP-A05A-01	TCGA-AP-A05A-01	GCAGGTGGGCC	GCAGGTGGGCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100293526	100293526	genome.wustl.edu	37	X	2631357	2631358	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-AP-A05A-01	TCGA-AP-A05A-01	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGT1	84061	genome.wustl.edu	37	X	77112976	77112980	+	Frame_Shift_Del	DEL	GAGCT	GAGCT	-			TCGA-AP-A05A-01	TCGA-AP-A05A-01	GAGCT	GAGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
