Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
C1orf87	127795	genome.wustl.edu	37	1	60456364	60456364	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SV2A	9900	genome.wustl.edu	37	1	149879346	149879346	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6N1	128372	genome.wustl.edu	37	1	158735840	158735840	+	Silent	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR2	6262	genome.wustl.edu	37	1	237890494	237890494	+	Silent	SNP	G	G	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR2	6262	genome.wustl.edu	37	1	237895389	237895389	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOCK10	55619	genome.wustl.edu	37	2	225721665	225721665	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C3orf75	54859	genome.wustl.edu	37	3	47539822	47539822	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPB1	1360	genome.wustl.edu	37	3	148545842	148545842	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC2A2	6514	genome.wustl.edu	37	3	170716904	170716904	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A05J-01	TCGA-AP-A05J-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPL47	57129	genome.wustl.edu	37	3	179311677	179311677	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MB21D2	151963	genome.wustl.edu	37	3	192516732	192516732	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAP3	51056	genome.wustl.edu	37	4	17585168	17585168	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UCHL1	7345	genome.wustl.edu	37	4	41270034	41270034	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC31A	22872	genome.wustl.edu	37	4	83750193	83750193	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXW7	55294	genome.wustl.edu	37	4	153247289	153247289	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCTP1	79772	genome.wustl.edu	37	5	94046537	94046537	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05J-01	TCGA-AP-A05J-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA4	56144	genome.wustl.edu	37	5	140188969	140188969	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNOT8	9337	genome.wustl.edu	37	5	154244884	154244884	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTNL2	56244	genome.wustl.edu	37	6	32362627	32362627	+	Silent	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPS10	6204	genome.wustl.edu	37	6	34392973	34392973	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05J-01	TCGA-AP-A05J-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POU3F2	5454	genome.wustl.edu	37	6	99283794	99283794	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRDM1	639	genome.wustl.edu	37	6	106555117	106555117	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C7orf16	10842	genome.wustl.edu	37	7	31736617	31736617	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC3A	4584	genome.wustl.edu	37	7	100551076	100551076	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENTPD4	9583	genome.wustl.edu	37	8	23299143	23299143	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKDC	5591	genome.wustl.edu	37	8	48686735	48686735	+	Nonstop_Mutation	SNP	C	C	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNGB3	54714	genome.wustl.edu	37	8	87738841	87738841	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC442421	442421	genome.wustl.edu	37	9	66500592	66500592	+	RNA	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDH18A1	5832	genome.wustl.edu	37	10	97402778	97402778	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCHS1	8642	genome.wustl.edu	37	11	6645139	6645139	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UEVLD	55293	genome.wustl.edu	37	11	18568531	18568531	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5M3	219482	genome.wustl.edu	37	11	56237488	56237488	+	Silent	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPAS4	266743	genome.wustl.edu	37	11	66190406	66190406	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNS	2799	genome.wustl.edu	37	12	65122806	65122806	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC15A4	121260	genome.wustl.edu	37	12	129299500	129299500	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SACS	26278	genome.wustl.edu	37	13	23909977	23909977	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1704	55425	genome.wustl.edu	37	13	45602090	45602090	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABHD13	84945	genome.wustl.edu	37	13	108881664	108881664	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPL10L	140801	genome.wustl.edu	37	14	47120570	47120570	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIX6	4990	genome.wustl.edu	37	14	60976476	60976476	+	Silent	SNP	G	G	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOX3	27324	genome.wustl.edu	37	16	52473330	52473330	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
E2F4	1874	genome.wustl.edu	37	16	67229820	67229820	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLEC18C	283971	genome.wustl.edu	37	16	70211337	70211337	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7577121	7577121	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP35	2909	genome.wustl.edu	37	19	47422114	47422114	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIR3DL3	115653	genome.wustl.edu	37	19	55247528	55247528	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A05J-01	TCGA-AP-A05J-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP27-1	643812	genome.wustl.edu	37	21	31709534	31709534	+	Silent	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC37A1	54020	genome.wustl.edu	37	21	43994957	43994957	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198763	0	genome.wustl.edu	37	MT	5296	5296	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCOR	54880	genome.wustl.edu	37	X	39932475	39932475	+	Silent	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMPD3	84443	genome.wustl.edu	37	X	106808260	106808260	+	Silent	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGAG1	57529	genome.wustl.edu	37	X	109697237	109697237	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ1	10178	genome.wustl.edu	37	X	123779056	123779056	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSCN	84033	genome.wustl.edu	37	1	228558889	228558889	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288406	100288406	genome.wustl.edu	37	12	92437	92437	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC1	6614	genome.wustl.edu	37	20	3677789	3677789	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A05J-01	TCGA-AP-A05J-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBR4	23352	genome.wustl.edu	37	1	19408294	19408295	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AP-A05J-01	TCGA-AP-A05J-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP35	2909	genome.wustl.edu	37	19	47422527	47422530	+	Frame_Shift_Del	DEL	CTGA	CTGA	-			TCGA-AP-A05J-01	TCGA-AP-A05J-01	CTGA	CTGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
