Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
MTOR	2475	genome.wustl.edu	37	1	11168338	11168338	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27105586	27105586	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTGER3	5733	genome.wustl.edu	37	1	71478027	71478027	+	Silent	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR2	1952	genome.wustl.edu	37	1	109795808	109795808	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMG5	23381	genome.wustl.edu	37	1	156220438	156220438	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC71	149499	genome.wustl.edu	37	1	156899090	156899090	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP1A2	477	genome.wustl.edu	37	1	160105033	160105033	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL12	59349	genome.wustl.edu	37	1	202887421	202887421	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH3BP5L	80851	genome.wustl.edu	37	1	249110822	249110822	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMC6	79677	genome.wustl.edu	37	2	17860182	17860182	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY1	57590	genome.wustl.edu	37	2	224760304	224760304	+	Silent	SNP	G	G	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASB18	401036	genome.wustl.edu	37	2	237150058	237150058	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSRNP1	64651	genome.wustl.edu	37	3	39185717	39185717	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266103	41266103	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF148	7707	genome.wustl.edu	37	3	124998005	124998005	+	Silent	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC730129	730129	genome.wustl.edu	37	3	163719802	163719802	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FXR1	8087	genome.wustl.edu	37	3	180652940	180652940	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFYVE28	57732	genome.wustl.edu	37	4	2321970	2321970	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC158	339965	genome.wustl.edu	37	4	77234349	77234349	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HPSE	10855	genome.wustl.edu	37	4	84231997	84231997	+	Silent	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXO8	26269	genome.wustl.edu	37	4	175158646	175158646	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBN2	2201	genome.wustl.edu	37	5	127685143	127685143	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR31	2853	genome.wustl.edu	37	6	167570740	167570740	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WBSCR17	64409	genome.wustl.edu	37	7	70853279	70853279	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TECPR1	25851	genome.wustl.edu	37	7	97847352	97847352	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTUS1	57509	genome.wustl.edu	37	8	17507462	17507462	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS9	55756	genome.wustl.edu	37	8	28716966	28716966	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PXDNL	137902	genome.wustl.edu	37	8	52321076	52321076	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSTF3	1479	genome.wustl.edu	37	11	33123811	33123811	+	Silent	SNP	A	A	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLG2	1740	genome.wustl.edu	37	11	84865696	84865696	+	Splice_Site	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6C1	390321	genome.wustl.edu	37	12	55715014	55715014	+	Silent	SNP	T	T	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBMS2	5939	genome.wustl.edu	37	12	56982115	56982115	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED13L	23389	genome.wustl.edu	37	12	116424926	116424926	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0564	23078	genome.wustl.edu	37	13	42273317	42273317	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IPO5	3843	genome.wustl.edu	37	13	98669039	98669039	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4K14	122740	genome.wustl.edu	37	14	20482811	20482811	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG14	22863	genome.wustl.edu	37	14	55844731	55844731	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SKOR1	390598	genome.wustl.edu	37	15	68118468	68118468	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNP2	7142	genome.wustl.edu	37	16	11362819	11362819	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFATC3	4775	genome.wustl.edu	37	16	68156199	68156199	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NETO1	81832	genome.wustl.edu	37	18	70461478	70461478	+	Silent	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLK7	5650	genome.wustl.edu	37	19	51483588	51483588	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC14	100049587	genome.wustl.edu	37	19	52149062	52149062	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XRN2	22803	genome.wustl.edu	37	20	21324732	21324732	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO18B	84700	genome.wustl.edu	37	22	26164432	26164432	+	Silent	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210082	0	genome.wustl.edu	37	MT	2408	2408	+	RNA	SNP	T	T	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GK	2710	genome.wustl.edu	37	X	30739106	30739106	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCOR	54880	genome.wustl.edu	37	X	39921444	39921444	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP2B3	492	genome.wustl.edu	37	X	152845458	152845458	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000248460	0	genome.wustl.edu	37	7	65188439	65188439	+	RNA	SNP	G	G	A			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAPPC9	83696	genome.wustl.edu	37	8	141460985	141460985	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198886	0	genome.wustl.edu	37	MT	11897	11897	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKT1	207	genome.wustl.edu	37	14	105246551	105246551	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMG1	23049	genome.wustl.edu	37	16	18841330	18841346	+	Frame_Shift_Del	DEL	TAGCACCTGCCGGTGAT	TAGCACCTGCCGGTGAT	-			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	TAGCACCTGCCGGTGAT	TAGCACCTGCCGGTGAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTCF	10664	genome.wustl.edu	37	16	67670599	67670600	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LL-01	TCGA-AP-A0LL-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
