Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
HAO2	51179	genome.wustl.edu	37	1	119925645	119925645	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2T1	26696	genome.wustl.edu	37	1	248569858	248569858	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC21B	79809	genome.wustl.edu	37	2	166781179	166781179	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645978	645978	genome.wustl.edu	37	2	207275628	207275628	+	RNA	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEG	10290	genome.wustl.edu	37	2	220338272	220338272	+	Silent	SNP	C	C	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACCN4	55515	genome.wustl.edu	37	2	220397136	220397136	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A20	54716	genome.wustl.edu	37	3	45812919	45812919	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBXN7	26043	genome.wustl.edu	37	3	196096311	196096311	+	Silent	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLR2B	5431	genome.wustl.edu	37	4	57876368	57876368	+	Splice_Site	SNP	T	T	G			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA11	56138	genome.wustl.edu	37	5	140248834	140248834	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VARS	7407	genome.wustl.edu	37	6	31750214	31750214	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FZD1	8321	genome.wustl.edu	37	7	90895880	90895880	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFIL3	4783	genome.wustl.edu	37	9	94171833	94171833	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GARNL3	84253	genome.wustl.edu	37	9	130075772	130075772	+	Silent	SNP	C	C	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC16A	9919	genome.wustl.edu	37	9	139357402	139357402	+	Silent	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692905	89692905	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89711891	89711891	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR51G2	81282	genome.wustl.edu	37	11	4936283	4936283	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC8	6833	genome.wustl.edu	37	11	17428295	17428295	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC494141	494141	genome.wustl.edu	37	11	18231765	18231765	+	RNA	SNP	T	T	G			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf9	745	genome.wustl.edu	37	11	61544842	61544842	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
METAP2	10988	genome.wustl.edu	37	12	95879657	95879657	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKS1B	56899	genome.wustl.edu	37	12	99166884	99166884	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM132B	114795	genome.wustl.edu	37	12	125834187	125834187	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF268	10795	genome.wustl.edu	37	12	133781031	133781031	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC3	342125	genome.wustl.edu	37	15	81636316	81636316	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARSG	22901	genome.wustl.edu	37	17	66391299	66391299	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC4	147798	genome.wustl.edu	37	19	54666489	54666489	+	Silent	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000233794	0	genome.wustl.edu	37	GL000225.1	79452	79452	+	Silent	SNP	A	A	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMPD4	9758	genome.wustl.edu	37	X	12627868	12627868	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNA3	55558	genome.wustl.edu	37	X	153699494	153699494	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf53	388722	genome.wustl.edu	37	1	197871863	197871863	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX16	8449	genome.wustl.edu	37	6	30622963	30622963	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FIG4	9896	genome.wustl.edu	37	6	110056484	110056484	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEFL	4747	genome.wustl.edu	37	8	24813310	24813310	+	Silent	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHG4	3503	genome.wustl.edu	37	14	106091238	106091238	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210077	0	genome.wustl.edu	37	MT	1669	1669	+	RNA	SNP	G	G	A			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210082	0	genome.wustl.edu	37	MT	2773	2773	+	RNA	SNP	A	A	G			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC646214	646214	genome.wustl.edu	37	15	21940430	21940431	+	RNA	INS	-	-	TTACTTTGTTTATCAGTAA			TCGA-AP-A0LO-01	TCGA-AP-A0LO-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
