Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CHD5	26038	genome.wustl.edu	37	1	6211198	6211198	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RERE	473	genome.wustl.edu	37	1	8425908	8425908	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TARDBP	23435	genome.wustl.edu	37	1	11080531	11080531	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHC2	1912	genome.wustl.edu	37	1	33840972	33840972	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD2	114784	genome.wustl.edu	37	1	34006795	34006795	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMYM6	9204	genome.wustl.edu	37	1	35474490	35474490	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIK3	2899	genome.wustl.edu	37	1	37307343	37307343	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RLF	6018	genome.wustl.edu	37	1	40705784	40705784	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SZT2	23334	genome.wustl.edu	37	1	43896737	43896737	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMAP1	55929	genome.wustl.edu	37	1	44685127	44685127	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ORC1	4998	genome.wustl.edu	37	1	52850321	52850321	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZCCHC11	23318	genome.wustl.edu	37	1	52981598	52981598	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM48	55706	genome.wustl.edu	37	1	54273375	54273375	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP24	23358	genome.wustl.edu	37	1	55560963	55560963	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP24	23358	genome.wustl.edu	37	1	55563339	55563339	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOOK1	51361	genome.wustl.edu	37	1	60294499	60294499	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INADL	10207	genome.wustl.edu	37	1	62582249	62582249	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INADL	10207	genome.wustl.edu	37	1	62594568	62594568	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FUBP1	8880	genome.wustl.edu	37	1	78432410	78432410	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF644	84146	genome.wustl.edu	37	1	91383650	91383650	+	Silent	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA4	24	genome.wustl.edu	37	1	94564497	94564497	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VAV3	10451	genome.wustl.edu	37	1	108313328	108313328	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PI4KB	5298	genome.wustl.edu	37	1	151266606	151266606	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
S100A8	6279	genome.wustl.edu	37	1	153362953	153362953	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IQGAP3	128239	genome.wustl.edu	37	1	156518182	156518182	+	Silent	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ISG20L2	81875	genome.wustl.edu	37	1	156697181	156697181	+	Silent	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR10T2	128360	genome.wustl.edu	37	1	158368475	158368475	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRC2C	23215	genome.wustl.edu	37	1	171544168	171544168	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RABGAP1L	9910	genome.wustl.edu	37	1	174200461	174200461	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NMNAT2	23057	genome.wustl.edu	37	1	183262858	183262858	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPR	7175	genome.wustl.edu	37	1	186302265	186302265	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HADHB	3032	genome.wustl.edu	37	2	26486333	26486333	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX57	90957	genome.wustl.edu	37	2	39088340	39088340	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MOGS	7841	genome.wustl.edu	37	2	74688908	74688908	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPP4A	3631	genome.wustl.edu	37	2	99181122	99181122	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF5B	9669	genome.wustl.edu	37	2	99976805	99976805	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEB	4703	genome.wustl.edu	37	2	152510504	152510504	+	Splice_Site	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GALNT5	11227	genome.wustl.edu	37	2	158115956	158115956	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179408965	179408965	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179474467	179474467	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEG	10290	genome.wustl.edu	37	2	220353340	220353340	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPATA3	130560	genome.wustl.edu	37	2	231861028	231861028	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKD	8527	genome.wustl.edu	37	2	234346920	234346920	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG4B	23192	genome.wustl.edu	37	2	242611841	242611841	+	Splice_Site	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIP2	80852	genome.wustl.edu	37	3	14549147	14549147	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD28	23243	genome.wustl.edu	37	3	15727522	15727522	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF501	115560	genome.wustl.edu	37	3	44776365	44776365	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAIP	10293	genome.wustl.edu	37	3	49885601	49885601	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPRBP	9730	genome.wustl.edu	37	3	51459868	51459868	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAP1	8314	genome.wustl.edu	37	3	52436395	52436395	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HLTF	6596	genome.wustl.edu	37	3	148789143	148789143	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178916891	178916891	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPON2	10417	genome.wustl.edu	37	4	1164359	1164359	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTT	3064	genome.wustl.edu	37	4	3127339	3127339	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPFFR2	10886	genome.wustl.edu	37	4	73013008	73013008	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN13	5783	genome.wustl.edu	37	4	87683990	87683990	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAP1GDS1	5910	genome.wustl.edu	37	4	99358094	99358094	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTTP	4547	genome.wustl.edu	37	4	100540225	100540225	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MANBA	4126	genome.wustl.edu	37	4	103635609	103635609	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EGF	1950	genome.wustl.edu	37	4	110909858	110909858	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C4orf21	55345	genome.wustl.edu	37	4	113462392	113462392	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PET112	5188	genome.wustl.edu	37	4	152594036	152594036	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPY2R	4887	genome.wustl.edu	37	4	156135236	156135236	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RXFP1	59350	genome.wustl.edu	37	4	159529174	159529174	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAPGEF2	9693	genome.wustl.edu	37	4	160273951	160273951	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K1	4214	genome.wustl.edu	37	5	56161195	56161195	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645181	645181	genome.wustl.edu	37	5	84845301	84845301	+	RNA	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNN2	3781	genome.wustl.edu	37	5	113740267	113740267	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMXL1	1657	genome.wustl.edu	37	5	118485645	118485645	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA9	9752	genome.wustl.edu	37	5	140229035	140229035	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA9	9752	genome.wustl.edu	37	5	140230488	140230488	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGB6	56100	genome.wustl.edu	37	5	140787977	140787977	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR151	134391	genome.wustl.edu	37	5	145895279	145895279	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTR4	3360	genome.wustl.edu	37	5	147900486	147900486	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251133	0	genome.wustl.edu	37	5	175716453	175716453	+	RNA	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JARID2	3720	genome.wustl.edu	37	6	15520402	15520402	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP153	9972	genome.wustl.edu	37	6	17688850	17688850	+	Splice_Site	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF144B	255488	genome.wustl.edu	37	6	18457581	18457581	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF184	7738	genome.wustl.edu	37	6	27420247	27420247	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF192	7745	genome.wustl.edu	37	6	28121102	28121102	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf136	221545	genome.wustl.edu	37	6	30617510	30617510	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LEMD2	221496	genome.wustl.edu	37	6	33747922	33747922	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGD2	221472	genome.wustl.edu	37	6	36982668	36982668	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf130	221443	genome.wustl.edu	37	6	41035088	41035088	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC29A1	2030	genome.wustl.edu	37	6	44198193	44198193	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FILIP1	27145	genome.wustl.edu	37	6	76072525	76072525	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMC2	84071	genome.wustl.edu	37	6	109190136	109190136	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM54A	113115	genome.wustl.edu	37	6	136560837	136560837	+	Silent	SNP	T	T	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP7	9053	genome.wustl.edu	37	6	136683831	136683831	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDK1	221935	genome.wustl.edu	37	7	4008911	4008911	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC4	55146	genome.wustl.edu	37	7	6620230	6620230	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IKZF1	10320	genome.wustl.edu	37	7	50455151	50455151	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM3	2913	genome.wustl.edu	37	7	86469106	86469106	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLDN12	9069	genome.wustl.edu	37	7	90042675	90042675	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHRM2	1129	genome.wustl.edu	37	7	136700369	136700369	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR7E8P	346708	genome.wustl.edu	37	8	12542232	12542232	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDGFRL	5157	genome.wustl.edu	37	8	17486234	17486234	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC25	55246	genome.wustl.edu	37	8	27614246	27614246	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMBOX1	79618	genome.wustl.edu	37	8	28908593	28908593	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASH2L	9070	genome.wustl.edu	37	8	37967910	37967910	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP7B1	9420	genome.wustl.edu	37	8	65537090	65537090	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF24	347240	genome.wustl.edu	37	9	34256198	34256198	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf71	169693	genome.wustl.edu	37	9	71152302	71152302	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APBA1	320	genome.wustl.edu	37	9	72130951	72130951	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZCCHC6	79670	genome.wustl.edu	37	9	88938314	88938314	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAAT	570	genome.wustl.edu	37	9	104130497	104130497	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SVEP1	79987	genome.wustl.edu	37	9	113209210	113209210	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTRL	11064	genome.wustl.edu	37	9	123912589	123912589	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB6	10773	genome.wustl.edu	37	9	125673282	125673282	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAIF1	203245	genome.wustl.edu	37	9	130825822	130825822	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED22	6837	genome.wustl.edu	37	9	136213509	136213509	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD3	8019	genome.wustl.edu	37	9	136910513	136910513	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNT1	57582	genome.wustl.edu	37	9	138669247	138669247	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C10orf18	54906	genome.wustl.edu	37	10	5803347	5803347	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMC4	55130	genome.wustl.edu	37	10	28149666	28149666	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGB1	3688	genome.wustl.edu	37	10	33212526	33212526	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC340888	340888	genome.wustl.edu	37	10	69510046	69510046	+	RNA	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZCCHC24	219654	genome.wustl.edu	37	10	81154182	81154182	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PYROXD2	84795	genome.wustl.edu	37	10	100159901	100159901	+	Silent	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACSL5	51703	genome.wustl.edu	37	10	114177682	114177682	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDHR5	53841	genome.wustl.edu	37	11	619357	619357	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR51B6	390058	genome.wustl.edu	37	11	5373165	5373165	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANO3	63982	genome.wustl.edu	37	11	26463464	26463464	+	Splice_Site	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCDC5	100506627	genome.wustl.edu	37	11	30944140	30944140	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSTF3	1479	genome.wustl.edu	37	11	33124658	33124658	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGA3	643834	genome.wustl.edu	37	11	60978845	60978845	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB3	79842	genome.wustl.edu	37	11	62520788	62520788	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNK7	10089	genome.wustl.edu	37	11	65361004	65361004	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTBN2	6712	genome.wustl.edu	37	11	66478492	66478492	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS4	92105	genome.wustl.edu	37	11	77594924	77594924	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000214391	0	genome.wustl.edu	37	11	90016631	90016631	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1731	85459	genome.wustl.edu	37	11	93417145	93417145	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIWIL4	143689	genome.wustl.edu	37	11	94301960	94301960	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGR	5241	genome.wustl.edu	37	11	100920786	100920786	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXCR5	643	genome.wustl.edu	37	11	118764338	118764338	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRDM10	56980	genome.wustl.edu	37	11	129793189	129793189	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF9B	22997	genome.wustl.edu	37	11	133807732	133807732	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288406	100288406	genome.wustl.edu	37	12	92498	92498	+	Silent	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXL14	144699	genome.wustl.edu	37	12	1702201	1702201	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAPDH	2597	genome.wustl.edu	37	12	6646115	6646115	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHDC5	57542	genome.wustl.edu	37	12	27934137	27934137	+	Splice_Site	SNP	T	T	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF21A	55605	genome.wustl.edu	37	12	39716651	39716651	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM106C	79022	genome.wustl.edu	37	12	48359109	48359109	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCRS1	10445	genome.wustl.edu	37	12	49952730	49952730	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCKAP5L	57701	genome.wustl.edu	37	12	50187163	50187163	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB39	9880	genome.wustl.edu	37	12	57398045	57398045	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMCC3	57458	genome.wustl.edu	37	12	94975882	94975882	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC53	51019	genome.wustl.edu	37	12	102455066	102455066	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC63	160762	genome.wustl.edu	37	12	111311755	111311755	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OAS2	4939	genome.wustl.edu	37	12	113440758	113440758	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED13L	23389	genome.wustl.edu	37	12	116408546	116408546	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PUS1	80324	genome.wustl.edu	37	12	132426095	132426095	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SACS	26278	genome.wustl.edu	37	13	23929962	23929962	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTUS2	23281	genome.wustl.edu	37	13	30062109	30062109	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLITRK6	84189	genome.wustl.edu	37	13	86368978	86368978	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC643677	643677	genome.wustl.edu	37	13	103398758	103398758	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO16	23026	genome.wustl.edu	37	13	109496759	109496759	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUL4A	8451	genome.wustl.edu	37	13	113891192	113891192	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC5	91875	genome.wustl.edu	37	14	20768861	20768861	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOVA1	4857	genome.wustl.edu	37	14	27064736	27064736	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRMT5	57570	genome.wustl.edu	37	14	61445998	61445998	+	Silent	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMC1	5700	genome.wustl.edu	37	14	90734747	90734747	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINA1	5265	genome.wustl.edu	37	14	94849388	94849388	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR409	574413	genome.wustl.edu	37	14	101531680	101531680	+	RNA	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTC1	70	genome.wustl.edu	37	15	35085610	35085610	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHF	90525	genome.wustl.edu	37	15	45490991	45490991	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMXL2	23312	genome.wustl.edu	37	15	51792189	51792189	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGDCC3	9543	genome.wustl.edu	37	15	65622724	65622724	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D21	161514	genome.wustl.edu	37	15	74177418	74177418	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLK3	1198	genome.wustl.edu	37	15	74922131	74922131	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNUPN	10073	genome.wustl.edu	37	15	75909889	75909889	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH2D7	646892	genome.wustl.edu	37	15	78393428	78393428	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLCO3A1	28232	genome.wustl.edu	37	15	92638148	92638148	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CREBBP	1387	genome.wustl.edu	37	16	3777856	3777856	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC6	368	genome.wustl.edu	37	16	16308268	16308268	+	Nonsense_Mutation	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC6P1	653190	genome.wustl.edu	37	16	18591553	18591553	+	RNA	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACSM3	6296	genome.wustl.edu	37	16	20797562	20797562	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF6	10261	genome.wustl.edu	37	16	21658498	21658498	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSG1L	146395	genome.wustl.edu	37	16	27974490	27974490	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTCF	10664	genome.wustl.edu	37	16	67654643	67654643	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHODH	1723	genome.wustl.edu	37	16	72057419	72057419	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMD7	5713	genome.wustl.edu	37	16	74334017	74334017	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTNAP4	85445	genome.wustl.edu	37	16	76486506	76486506	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VAT1L	57687	genome.wustl.edu	37	16	78011494	78011494	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FANCA	2175	genome.wustl.edu	37	16	89809342	89809342	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0664	23277	genome.wustl.edu	37	17	2598369	2598369	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRBA2	124751	genome.wustl.edu	37	17	8274834	8274834	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP43	124739	genome.wustl.edu	37	17	9603566	9603566	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287863	100287863	genome.wustl.edu	37	17	37331704	37331704	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAST	2520	genome.wustl.edu	37	17	39871803	39871803	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNK4	65266	genome.wustl.edu	37	17	40936018	40936018	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACSF2	80221	genome.wustl.edu	37	17	48551331	48551331	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNGR2	9144	genome.wustl.edu	37	17	76166923	76166923	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXK2	3607	genome.wustl.edu	37	17	80526021	80526021	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD12	23253	genome.wustl.edu	37	18	9256590	9256590	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN2	5771	genome.wustl.edu	37	18	12830961	12830961	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM59A	64762	genome.wustl.edu	37	18	29890219	29890219	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAFB	6294	genome.wustl.edu	37	19	5654396	5654396	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHERP	10523	genome.wustl.edu	37	19	16631278	16631278	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLVAP	83483	genome.wustl.edu	37	19	17476280	17476280	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP1S	55201	genome.wustl.edu	37	19	17836983	17836983	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSHZ3	57616	genome.wustl.edu	37	19	31768350	31768350	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMKN	93099	genome.wustl.edu	37	19	35990910	35990910	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIRREL2	84063	genome.wustl.edu	37	19	36349434	36349434	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR87	83889	genome.wustl.edu	37	19	38376398	38376398	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC9	26093	genome.wustl.edu	37	19	47761875	47761875	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HRC	3270	genome.wustl.edu	37	19	49657958	49657958	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VSIG10L	147645	genome.wustl.edu	37	19	51840497	51840497	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF525	170958	genome.wustl.edu	37	19	53886339	53886339	+	RNA	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIR3DL1	3811	genome.wustl.edu	37	19	55329012	55329012	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP8	126205	genome.wustl.edu	37	19	56466271	56466271	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF460	10794	genome.wustl.edu	37	19	57802927	57802927	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASSF2	9770	genome.wustl.edu	37	20	4771179	4771179	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROKR2	128674	genome.wustl.edu	37	20	5282794	5282794	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNX5	27131	genome.wustl.edu	37	20	17933345	17933345	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF341	84905	genome.wustl.edu	37	20	32376706	32376706	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOP1	7150	genome.wustl.edu	37	20	39744081	39744081	+	Splice_Site	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRT	11122	genome.wustl.edu	37	20	40730844	40730844	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARFGEF2	10564	genome.wustl.edu	37	20	47607655	47607655	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBE2V1	7335	genome.wustl.edu	37	20	48700776	48700776	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LSM14B	149986	genome.wustl.edu	37	20	60705594	60705594	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC3	7267	genome.wustl.edu	37	21	38539917	38539917	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF295-AS1	150142	genome.wustl.edu	37	21	43444598	43444598	+	RNA	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCBP3	54039	genome.wustl.edu	37	21	47330911	47330911	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRMT2A	27037	genome.wustl.edu	37	22	20100339	20100339	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF74	7625	genome.wustl.edu	37	22	20748844	20748844	+	RNA	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC28	23331	genome.wustl.edu	37	22	28501515	28501515	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIMK2	3985	genome.wustl.edu	37	22	31661961	31661961	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPARA	5465	genome.wustl.edu	37	22	46614297	46614297	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
P2RY8	286530	genome.wustl.edu	37	X	1585023	1585023	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF8L2	347442	genome.wustl.edu	37	X	27765641	27765641	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OTUD5	55593	genome.wustl.edu	37	X	48780481	48780481	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB41	347517	genome.wustl.edu	37	X	69503807	69503807	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GDPD2	54857	genome.wustl.edu	37	X	69646793	69646793	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMCX2	9823	genome.wustl.edu	37	X	100911753	100911753	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM31	203562	genome.wustl.edu	37	X	102968606	102968606	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG4A	115201	genome.wustl.edu	37	X	107377297	107377297	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRS4	8471	genome.wustl.edu	37	X	107976184	107976184	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LONRF3	79836	genome.wustl.edu	37	X	118151556	118151556	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP14	158798	genome.wustl.edu	37	X	119048729	119048729	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPANXN3	139067	genome.wustl.edu	37	X	142596893	142596893	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP2B3	492	genome.wustl.edu	37	X	152835148	152835148	+	Splice_Site	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLIC2	1193	genome.wustl.edu	37	X	154507295	154507295	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBP7	388646	genome.wustl.edu	37	1	89613329	89613329	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THADA	63892	genome.wustl.edu	37	2	43768345	43768345	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC730268	730268	genome.wustl.edu	37	2	88019352	88019352	+	Silent	SNP	T	T	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179638970	179638970	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL4A3	1285	genome.wustl.edu	37	2	228102722	228102722	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDUFA10	4705	genome.wustl.edu	37	2	240957252	240957252	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGI1	9223	genome.wustl.edu	37	3	65346923	65346923	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COPB2	9276	genome.wustl.edu	37	3	139079976	139079976	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA7	56141	genome.wustl.edu	37	5	140214923	140214923	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000248940	0	genome.wustl.edu	37	6	6696723	6696723	+	RNA	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH11	8701	genome.wustl.edu	37	7	21847595	21847595	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC12	10071	genome.wustl.edu	37	7	100636231	100636231	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHB6	2051	genome.wustl.edu	37	7	142561896	142561896	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM91A1	157769	genome.wustl.edu	37	8	124781001	124781001	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CALHM3	119395	genome.wustl.edu	37	10	105233278	105233278	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC5B	727897	genome.wustl.edu	37	11	1270448	1270448	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC5A12	159963	genome.wustl.edu	37	11	26708078	26708078	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD6	114785	genome.wustl.edu	37	12	57920771	57920771	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAV3	89795	genome.wustl.edu	37	12	78579429	78579429	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP44	84101	genome.wustl.edu	37	12	95927260	95927260	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM109A	144717	genome.wustl.edu	37	12	111801061	111801061	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POTEG	404785	genome.wustl.edu	37	14	19553610	19553610	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POTEG	404785	genome.wustl.edu	37	14	19571395	19571395	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POTEM	641455	genome.wustl.edu	37	14	20020027	20020027	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITFG3	83986	genome.wustl.edu	37	16	313266	313266	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC342346	342346	genome.wustl.edu	37	16	4643237	4643237	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTMR4	9110	genome.wustl.edu	37	17	56572372	56572372	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DENND1C	79958	genome.wustl.edu	37	19	6475306	6475306	+	Silent	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NANOS3	342977	genome.wustl.edu	37	19	13988362	13988362	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAX1	5075	genome.wustl.edu	37	20	21687685	21687685	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FER1L4	80307	genome.wustl.edu	37	20	34147355	34147355	+	RNA	SNP	G	G	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALG12	79087	genome.wustl.edu	37	22	50303562	50303562	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FANCB	2187	genome.wustl.edu	37	X	14877328	14877328	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM45B	55855	genome.wustl.edu	37	X	129629139	129629139	+	RNA	SNP	G	G	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IDS	3423	genome.wustl.edu	37	X	148571916	148571916	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGFR2	2263	genome.wustl.edu	37	10	123279677	123279677	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKCB	5579	genome.wustl.edu	37	16	23999887	23999887	+	Silent	SNP	C	C	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERRFI1	54206	genome.wustl.edu	37	1	8074254	8074255	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A1	6548	genome.wustl.edu	37	1	27440668	27440668	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBMXL1	494115	genome.wustl.edu	37	1	89449217	89449217	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBP2	2634	genome.wustl.edu	37	1	89587571	89587572	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHTF1	10745	genome.wustl.edu	37	1	114242393	114242393	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRC2C	23215	genome.wustl.edu	37	1	171560900	171560900	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRN2	10446	genome.wustl.edu	37	1	204587829	204587829	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPP4A	3631	genome.wustl.edu	37	2	99154393	99154394	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC4A10	57282	genome.wustl.edu	37	2	162807300	162807300	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC80	285175	genome.wustl.edu	37	2	210696221	210696221	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEG	10290	genome.wustl.edu	37	2	220348876	220348876	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GIGYF2	26058	genome.wustl.edu	37	2	233704620	233704620	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP40	55230	genome.wustl.edu	37	2	234474223	234474223	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFRD2	7866	genome.wustl.edu	37	3	50327898	50327898	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCTD6	200845	genome.wustl.edu	37	3	58486772	58486772	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2A	83939	genome.wustl.edu	37	3	150289745	150289746	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C4orf10	317648	genome.wustl.edu	37	4	2952780	2952780	+	RNA	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCLT1	132320	genome.wustl.edu	37	4	129964624	129964625	+	Splice_Site	INS	-	-	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM92A3	403315	genome.wustl.edu	37	4	183959379	183959379	+	RNA	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NME5	8382	genome.wustl.edu	37	5	137451425	137451425	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729707	729707	genome.wustl.edu	37	5	180541681	180541681	+	RNA	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC17A1	6568	genome.wustl.edu	37	6	25830752	25830753	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H4E	8367	genome.wustl.edu	37	6	26204929	26204941	+	Frame_Shift_Del	DEL	CCGTAAGGTCCTG	CCGTAAGGTCCTG	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	CCGTAAGGTCCTG	CCGTAAGGTCCTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGL2	5863	genome.wustl.edu	37	6	33260898	33260898	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF3	23469	genome.wustl.edu	37	6	64415953	64415953	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCP	375616	genome.wustl.edu	37	7	128533329	128533329	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XKR5	389610	genome.wustl.edu	37	8	6690372	6690373	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251263	0	genome.wustl.edu	37	8	22447648	22447649	+	RNA	DEL	TG	TG	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	TG	TG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHMP7	91782	genome.wustl.edu	37	8	23106785	23106785	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C8orf37	157657	genome.wustl.edu	37	8	96259967	96259968	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF20L1	51105	genome.wustl.edu	37	8	133836264	133836264	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000231938	0	genome.wustl.edu	37	8	144458875	144458876	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	GT	GT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000228381	0	genome.wustl.edu	37	8	144690019	144690020	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN3	5774	genome.wustl.edu	37	9	112145798	112145799	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD3	8019	genome.wustl.edu	37	9	136918529	136918529	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SVIL	6840	genome.wustl.edu	37	10	29760116	29760116	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALOX5	240	genome.wustl.edu	37	10	45941070	45941072	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	AAG	AAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP54	159195	genome.wustl.edu	37	10	75296150	75296151	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDZD8	118987	genome.wustl.edu	37	10	119042898	119042898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMPD1	6609	genome.wustl.edu	37	11	6414449	6414450	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ILK	3611	genome.wustl.edu	37	11	6629392	6629392	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
QSER1	79832	genome.wustl.edu	37	11	32997895	32997895	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM111A	63901	genome.wustl.edu	37	11	58920086	58920087	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf57	55216	genome.wustl.edu	37	11	111953289	111953289	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC401777	401777	genome.wustl.edu	37	14	58096879	58096879	+	RNA	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf50	145376	genome.wustl.edu	37	14	65035125	65035126	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3J	8669	genome.wustl.edu	37	15	44843099	44843099	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC13C	440279	genome.wustl.edu	37	15	54614218	54614218	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RORA	6095	genome.wustl.edu	37	15	60919561	60919561	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIN3A	25942	genome.wustl.edu	37	15	75699401	75699402	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC3	342125	genome.wustl.edu	37	15	81625184	81625184	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100129395	100129395	genome.wustl.edu	37	17	36885026	36885027	+	RNA	DEL	TG	TG	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	TG	TG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACSF2	80221	genome.wustl.edu	37	17	48551137	48551138	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF43	54894	genome.wustl.edu	37	17	56448298	56448298	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP32	84669	genome.wustl.edu	37	17	58282809	58282810	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC727896	727896	genome.wustl.edu	37	18	2946534	2946534	+	RNA	DEL	T	T	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROCK1	6093	genome.wustl.edu	37	18	18533679	18533679	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMAD2	4087	genome.wustl.edu	37	18	45391500	45391501	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF234	10780	genome.wustl.edu	37	19	44661109	44661109	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXA2	3170	genome.wustl.edu	37	20	22562838	22562839	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	GC	GC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NHSL2	340527	genome.wustl.edu	37	X	71360213	71360213	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCORL1	63035	genome.wustl.edu	37	X	129190011	129190011	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LP-01	TCGA-AP-A0LP-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
