Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
UBR4	23352	genome.wustl.edu	37	1	19482148	19482148	+	Silent	SNP	A	A	G			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSPG2	3339	genome.wustl.edu	37	1	22174370	22174370	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPTN	126638	genome.wustl.edu	37	1	152127255	152127255	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASH1L	55870	genome.wustl.edu	37	1	155491095	155491095	+	Silent	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOS1	6654	genome.wustl.edu	37	2	39281778	39281778	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR7E91P	79315	genome.wustl.edu	37	2	71256292	71256292	+	RNA	SNP	T	T	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXD4L1	200350	genome.wustl.edu	37	2	114257810	114257810	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1B	53353	genome.wustl.edu	37	2	141143522	141143522	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP2	4036	genome.wustl.edu	37	2	170062145	170062145	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179469886	179469886	+	Silent	SNP	T	T	C			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY1	57590	genome.wustl.edu	37	2	224763755	224763755	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARL4C	10123	genome.wustl.edu	37	2	235404686	235404686	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMP	820	genome.wustl.edu	37	3	48265949	48265949	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHAC2	56134	genome.wustl.edu	37	5	140347689	140347689	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA1	56114	genome.wustl.edu	37	5	140711672	140711672	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf4	10826	genome.wustl.edu	37	5	154210416	154210416	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TINAG	27283	genome.wustl.edu	37	6	54214660	54214660	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POU3F2	5454	genome.wustl.edu	37	6	99283812	99283812	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A2	6582	genome.wustl.edu	37	6	160662520	160662520	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGAM	8972	genome.wustl.edu	37	7	141778630	141778630	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PARD3	56288	genome.wustl.edu	37	10	34805912	34805912	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692922	89692922	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTAF1	9044	genome.wustl.edu	37	10	93778569	93778569	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC6	54536	genome.wustl.edu	37	10	94757350	94757350	+	Silent	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf42	160298	genome.wustl.edu	37	11	6231683	6231683	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COPB1	1315	genome.wustl.edu	37	11	14487925	14487925	+	Silent	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESAM	90952	genome.wustl.edu	37	11	124623724	124623724	+	Silent	SNP	A	A	G			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D15	64786	genome.wustl.edu	37	12	72288565	72288565	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOS1	4842	genome.wustl.edu	37	12	117710315	117710315	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLXIP	22877	genome.wustl.edu	37	12	122618238	122618238	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHNAK2	113146	genome.wustl.edu	37	14	105407004	105407004	+	Silent	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC3	342125	genome.wustl.edu	37	15	81625494	81625494	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNK1	8711	genome.wustl.edu	37	17	7286288	7286288	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXW10	10517	genome.wustl.edu	37	17	18681918	18681918	+	Silent	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT13	3860	genome.wustl.edu	37	17	39659672	39659672	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
B3GNTL1	146712	genome.wustl.edu	37	17	80992968	80992968	+	Silent	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCC	1630	genome.wustl.edu	37	18	49867227	49867227	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBP	4155	genome.wustl.edu	37	18	74729151	74729151	+	Silent	SNP	C	C	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIF3A	64344	genome.wustl.edu	37	19	46834437	46834437	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF701	55762	genome.wustl.edu	37	19	53086548	53086548	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC4	147798	genome.wustl.edu	37	19	54668298	54668298	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSTR4	6754	genome.wustl.edu	37	20	23016655	23016655	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EP300	2033	genome.wustl.edu	37	22	41562637	41562637	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMC1B	27127	genome.wustl.edu	37	22	45809375	45809375	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMX	660	genome.wustl.edu	37	X	15560257	15560257	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPRASP1	9737	genome.wustl.edu	37	X	101910265	101910265	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GABRA3	2556	genome.wustl.edu	37	X	151514086	151514086	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB13	56123	genome.wustl.edu	37	5	140594040	140594040	+	Silent	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAPVD1	26130	genome.wustl.edu	37	9	128113134	128113134	+	Silent	SNP	G	G	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMC4	55130	genome.wustl.edu	37	10	28272825	28272825	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDH18A1	5832	genome.wustl.edu	37	10	97388190	97388190	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD3	1107	genome.wustl.edu	37	17	7813839	7813839	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYCBPAP	84073	genome.wustl.edu	37	17	48600414	48600414	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM122C	159091	genome.wustl.edu	37	X	133948871	133948871	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178916938	178916940	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	GAA	GAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89653836	89653837	+	Frame_Shift_Ins	INS	-	-	ATAC			TCGA-AP-A0LQ-01	TCGA-AP-A0LQ-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
