Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
PLEKHN1	84069	genome.wustl.edu	37	1	905935	905935	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP104	9731	genome.wustl.edu	37	1	3740038	3740038	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF13	148479	genome.wustl.edu	37	1	6680349	6680349	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLSTN1	22883	genome.wustl.edu	37	1	9811715	9811715	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRDM2	7799	genome.wustl.edu	37	1	14105787	14105787	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTRC	11330	genome.wustl.edu	37	1	15771139	15771139	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGMAT	79814	genome.wustl.edu	37	1	15909853	15909853	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645317	645317	genome.wustl.edu	37	1	15931403	15931403	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEN	23013	genome.wustl.edu	37	1	16256920	16256920	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF19	128272	genome.wustl.edu	37	1	16534495	16534495	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESPNP	284729	genome.wustl.edu	37	1	17030572	17030572	+	RNA	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf201	90529	genome.wustl.edu	37	1	24706160	24706160	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNKSR1	10256	genome.wustl.edu	37	1	26514789	26514789	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPATCH3	63906	genome.wustl.edu	37	1	27219197	27219197	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A1	6548	genome.wustl.edu	37	1	27429791	27429791	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHACTR4	65979	genome.wustl.edu	37	1	28786746	28786746	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNHG3	8420	genome.wustl.edu	37	1	28835458	28835458	+	RNA	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRU	10076	genome.wustl.edu	37	1	29642617	29642617	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LCK	3932	genome.wustl.edu	37	1	32745764	32745764	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD2	114784	genome.wustl.edu	37	1	34128645	34128645	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SFPQ	6421	genome.wustl.edu	37	1	35654848	35654848	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TFAP2E	339488	genome.wustl.edu	37	1	36060128	36060128	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPS15	64960	genome.wustl.edu	37	1	36923545	36923545	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIK3	2899	genome.wustl.edu	37	1	37324832	37324832	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCMH1	22955	genome.wustl.edu	37	1	41512120	41512120	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SZT2	23334	genome.wustl.edu	37	1	43891763	43891763	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUTYH	4595	genome.wustl.edu	37	1	45799121	45799121	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL9	114883	genome.wustl.edu	37	1	52251549	52251549	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRD1	4898	genome.wustl.edu	37	1	52280280	52280280	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM159A	348378	genome.wustl.edu	37	1	53122589	53122589	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIO1	1733	genome.wustl.edu	37	1	54359887	54359887	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KANK4	163782	genome.wustl.edu	37	1	62734038	62734038	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL12RB2	3595	genome.wustl.edu	37	1	67838135	67838135	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRSF11	9295	genome.wustl.edu	37	1	70697950	70697950	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSX2IP	117178	genome.wustl.edu	37	1	85113137	85113137	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC8B	23507	genome.wustl.edu	37	1	90058350	90058350	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GEMIN8P4	492303	genome.wustl.edu	37	1	90459144	90459144	+	RNA	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100286918	100286918	genome.wustl.edu	37	1	97050290	97050290	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PALMD	54873	genome.wustl.edu	37	1	100152744	100152744	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1324	57535	genome.wustl.edu	37	1	109742532	109742532	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR2	1952	genome.wustl.edu	37	1	109814989	109814989	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSRC1	84722	genome.wustl.edu	37	1	109824253	109824253	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR61	83873	genome.wustl.edu	37	1	110086063	110086063	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSTM4	2948	genome.wustl.edu	37	1	110199040	110199040	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNA3	3738	genome.wustl.edu	37	1	111216076	111216076	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNA3	3738	genome.wustl.edu	37	1	111216708	111216708	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRIG2	9860	genome.wustl.edu	37	1	113636070	113636070	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SV2A	9900	genome.wustl.edu	37	1	149881044	149881044	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANP32E	81611	genome.wustl.edu	37	1	150204166	150204166	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTSL4	54507	genome.wustl.edu	37	1	150529441	150529441	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPTN	126638	genome.wustl.edu	37	1	152128002	152128002	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLG	2312	genome.wustl.edu	37	1	152276312	152276312	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRNN	49860	genome.wustl.edu	37	1	152383073	152383073	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RXFP4	339403	genome.wustl.edu	37	1	155911908	155911908	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCAN	63827	genome.wustl.edu	37	1	156628449	156628449	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DEDD	9191	genome.wustl.edu	37	1	161092286	161092286	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR161	23432	genome.wustl.edu	37	1	168066278	168066278	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIFAP3	22920	genome.wustl.edu	37	1	169930291	169930291	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC16B	89866	genome.wustl.edu	37	1	177930832	177930832	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNT2	343450	genome.wustl.edu	37	1	196342344	196342344	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF21B	23046	genome.wustl.edu	37	1	200956183	200956183	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF21B	23046	genome.wustl.edu	37	1	200977986	200977986	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM81	388730	genome.wustl.edu	37	1	205053387	205053387	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC45A3	85414	genome.wustl.edu	37	1	205632155	205632155	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAIM3	9214	genome.wustl.edu	37	1	207087160	207087160	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf65	164127	genome.wustl.edu	37	1	223568645	223568645	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100130093	100130093	genome.wustl.edu	37	1	227920568	227920568	+	RNA	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSCN	84033	genome.wustl.edu	37	1	228520620	228520620	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSCN	84033	genome.wustl.edu	37	1	228563735	228563735	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DISC1	27185	genome.wustl.edu	37	1	231837748	231837748	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1804	84451	genome.wustl.edu	37	1	233514835	233514835	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYST	1130	genome.wustl.edu	37	1	235926125	235926125	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTN2	88	genome.wustl.edu	37	1	236902683	236902683	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2M5	127059	genome.wustl.edu	37	1	248309055	248309055	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GREB1	9687	genome.wustl.edu	37	2	11758553	11758553	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GREB1	9687	genome.wustl.edu	37	2	11780546	11780546	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CIB4	130106	genome.wustl.edu	37	2	26818053	26818053	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALK	238	genome.wustl.edu	37	2	29606606	29606606	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BIRC6	57448	genome.wustl.edu	37	2	32640284	32640284	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHCGR	3973	genome.wustl.edu	37	2	48925908	48925908	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR75	10936	genome.wustl.edu	37	2	54081089	54081089	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC88A	55704	genome.wustl.edu	37	2	55561787	55561787	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAT8	9027	genome.wustl.edu	37	2	73868263	73868263	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCGF1	84759	genome.wustl.edu	37	2	74733345	74733345	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLR1A	25885	genome.wustl.edu	37	2	86305239	86305239	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYG1	129530	genome.wustl.edu	37	2	99912133	99912133	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST10	9486	genome.wustl.edu	37	2	101009817	101009817	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL1RL2	8808	genome.wustl.edu	37	2	102842362	102842362	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCK2	8440	genome.wustl.edu	37	2	106471637	106471637	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLR1B	84172	genome.wustl.edu	37	2	113315619	113315619	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLR1B	84172	genome.wustl.edu	37	2	113330184	113330184	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN4	5775	genome.wustl.edu	37	2	120677746	120677746	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO7B	4648	genome.wustl.edu	37	2	128327424	128327424	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC653269	653269	genome.wustl.edu	37	2	131220767	131220767	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCM6	4175	genome.wustl.edu	37	2	136624275	136624275	+	Silent	SNP	A	A	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THSD7B	80731	genome.wustl.edu	37	2	138425349	138425349	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD5	55777	genome.wustl.edu	37	2	149247126	149247126	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NR4A2	4929	genome.wustl.edu	37	2	157186121	157186121	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TANC1	85461	genome.wustl.edu	37	2	160053278	160053278	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN9A	6335	genome.wustl.edu	37	2	167108386	167108386	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SP3	6670	genome.wustl.edu	37	2	174774770	174774770	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL3A1	1281	genome.wustl.edu	37	2	189867044	189867044	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASNSD1	54529	genome.wustl.edu	37	2	190530860	190530860	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR12	55759	genome.wustl.edu	37	2	203760861	203760861	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNS1	7145	genome.wustl.edu	37	2	218677119	218677119	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF142	7701	genome.wustl.edu	37	2	219508394	219508394	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP27A1	1593	genome.wustl.edu	37	2	219677340	219677340	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCB6	10058	genome.wustl.edu	37	2	220078657	220078657	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEG	10290	genome.wustl.edu	37	2	220353316	220353316	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSL1	23363	genome.wustl.edu	37	2	220428170	220428170	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCG2	7857	genome.wustl.edu	37	2	224463569	224463569	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRS1	3667	genome.wustl.edu	37	2	227660691	227660691	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC16A14	151473	genome.wustl.edu	37	2	230914620	230914620	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAB39	51719	genome.wustl.edu	37	2	231624754	231624754	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHRND	1144	genome.wustl.edu	37	2	233399886	233399886	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKD	8527	genome.wustl.edu	37	2	234344527	234344527	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC13	6396	genome.wustl.edu	37	3	10346791	10346791	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HRH1	3269	genome.wustl.edu	37	3	11300961	11300961	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IQSEC1	9922	genome.wustl.edu	37	3	12950010	12950010	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGD5	152273	genome.wustl.edu	37	3	14940265	14940265	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGD5	152273	genome.wustl.edu	37	3	14974177	14974177	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF860	344787	genome.wustl.edu	37	3	32031756	32031756	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCBP2	1238	genome.wustl.edu	37	3	42906895	42906895	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF445	353274	genome.wustl.edu	37	3	44489342	44489342	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FYCO1	79443	genome.wustl.edu	37	3	45996853	45996853	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SETD2	29072	genome.wustl.edu	37	3	47164123	47164123	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNB1	5364	genome.wustl.edu	37	3	48462318	48462318	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNB1	5364	genome.wustl.edu	37	3	48462729	48462729	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMB2	3913	genome.wustl.edu	37	3	49162782	49162782	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IP6K1	9807	genome.wustl.edu	37	3	49764848	49764848	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MON1A	84315	genome.wustl.edu	37	3	49948257	49948257	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM115	11070	genome.wustl.edu	37	3	50392824	50392824	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNL3	26354	genome.wustl.edu	37	3	52727456	52727456	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITIH4	3700	genome.wustl.edu	37	3	52854721	52854721	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRG	5793	genome.wustl.edu	37	3	62216903	62216903	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CADPS	8618	genome.wustl.edu	37	3	62631414	62631414	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5H15	403274	genome.wustl.edu	37	3	97887622	97887622	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZPLD1	131368	genome.wustl.edu	37	3	102153987	102153987	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBLB	868	genome.wustl.edu	37	3	105422965	105422965	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GUCA1C	9626	genome.wustl.edu	37	3	108626930	108626930	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XRN1	54464	genome.wustl.edu	37	3	142031595	142031595	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGTR1	185	genome.wustl.edu	37	3	148459561	148459561	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNIK	23043	genome.wustl.edu	37	3	170884920	170884920	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTL6A	86	genome.wustl.edu	37	3	179294018	179294018	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DVL3	1857	genome.wustl.edu	37	3	183882616	183882616	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GP5	2814	genome.wustl.edu	37	3	194118305	194118305	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WHSC2	7469	genome.wustl.edu	37	4	1985323	1985323	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC84740	84740	genome.wustl.edu	37	4	7780459	7780459	+	RNA	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DRD5	1816	genome.wustl.edu	37	4	9784937	9784937	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BEND4	389206	genome.wustl.edu	37	4	42119672	42119672	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNPDA2	132789	genome.wustl.edu	37	4	44713031	44713031	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC66	339977	genome.wustl.edu	37	4	52862253	52862253	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC1	55763	genome.wustl.edu	37	4	56768654	56768654	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHA5	2044	genome.wustl.edu	37	4	66361207	66361207	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000245879	0	genome.wustl.edu	37	4	74964407	74964407	+	RNA	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRAS1	80144	genome.wustl.edu	37	4	79458198	79458198	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY3	23001	genome.wustl.edu	37	4	85594131	85594131	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARSJ	79642	genome.wustl.edu	37	4	114824027	114824027	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD50	57182	genome.wustl.edu	37	4	125590323	125590323	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGA	2243	genome.wustl.edu	37	4	155505774	155505774	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIA2	2891	genome.wustl.edu	37	4	158142953	158142953	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR3	7098	genome.wustl.edu	37	4	186997960	186997960	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT1	2195	genome.wustl.edu	37	4	187524699	187524699	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT1	2195	genome.wustl.edu	37	4	187527266	187527266	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT1	2195	genome.wustl.edu	37	4	187539448	187539448	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIML1	339976	genome.wustl.edu	37	4	189060900	189060900	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC3	11336	genome.wustl.edu	37	5	457022	457022	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NSUN2	54888	genome.wustl.edu	37	5	6600070	6600070	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKH	56172	genome.wustl.edu	37	5	14769183	14769183	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXL7	23194	genome.wustl.edu	37	5	15928198	15928198	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF622	90441	genome.wustl.edu	37	5	16465474	16465474	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDZD2	23037	genome.wustl.edu	37	5	32089450	32089450	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNX18	112574	genome.wustl.edu	37	5	53814853	53814853	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDE4D	5144	genome.wustl.edu	37	5	58882193	58882193	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF366	167465	genome.wustl.edu	37	5	71739932	71739932	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100129566	100129566	genome.wustl.edu	37	5	75672870	75672870	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBPF22P	285622	genome.wustl.edu	37	5	85592242	85592242	+	RNA	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POU5F2	134187	genome.wustl.edu	37	5	93076428	93076428	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCTP1	79772	genome.wustl.edu	37	5	94248613	94248613	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPIP5K2	23262	genome.wustl.edu	37	5	102484895	102484895	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXL17	64839	genome.wustl.edu	37	5	107521920	107521920	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAPGEF6	51735	genome.wustl.edu	37	5	130883836	130883836	+	Silent	SNP	A	A	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNIP1	96459	genome.wustl.edu	37	5	131007632	131007632	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HARS	3035	genome.wustl.edu	37	5	140057274	140057274	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA3	56145	genome.wustl.edu	37	5	140182516	140182516	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA8	56140	genome.wustl.edu	37	5	140221198	140221198	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB5	26167	genome.wustl.edu	37	5	140517169	140517169	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB6	56130	genome.wustl.edu	37	5	140531614	140531614	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB16	57717	genome.wustl.edu	37	5	140563515	140563515	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB9	56127	genome.wustl.edu	37	5	140567490	140567490	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA3	56112	genome.wustl.edu	37	5	140724459	140724459	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGB6	56100	genome.wustl.edu	37	5	140789380	140789380	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPINK5	11005	genome.wustl.edu	37	5	147498547	147498547	+	Splice_Site	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP10B	23120	genome.wustl.edu	37	5	160115033	160115033	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXW11	23291	genome.wustl.edu	37	5	171337690	171337690	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STC2	8614	genome.wustl.edu	37	5	172750287	172750287	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
N4BP3	23138	genome.wustl.edu	37	5	177547388	177547388	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D9B	23061	genome.wustl.edu	37	5	179318540	179318540	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729707	729707	genome.wustl.edu	37	5	180541019	180541019	+	RNA	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GCNT2	2651	genome.wustl.edu	37	6	10557032	10557032	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEDD9	4739	genome.wustl.edu	37	6	11191425	11191425	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GFOD1	54438	genome.wustl.edu	37	6	13365349	13365349	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAP2	10486	genome.wustl.edu	37	6	17421798	17421798	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRSN1	140767	genome.wustl.edu	37	6	24145982	24145982	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H2BD	3017	genome.wustl.edu	37	6	26158501	26158501	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H2BE	8344	genome.wustl.edu	37	6	26184286	26184286	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTN2A2	10385	genome.wustl.edu	37	6	26392629	26392629	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF391	346157	genome.wustl.edu	37	6	27369058	27369058	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2B2	81697	genome.wustl.edu	37	6	27879356	27879356	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGBD1	84547	genome.wustl.edu	37	6	28268674	28268674	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF39	80352	genome.wustl.edu	37	6	30043429	30043429	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf47	57827	genome.wustl.edu	37	6	31626843	31626843	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VARS	7407	genome.wustl.edu	37	6	31753448	31753448	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPT2	9374	genome.wustl.edu	37	6	32130627	32130627	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL11A2	1302	genome.wustl.edu	37	6	33147515	33147515	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNRPC	6631	genome.wustl.edu	37	6	34735775	34735775	+	Splice_Site	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGC	5225	genome.wustl.edu	37	6	41715044	41715044	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUL7	9820	genome.wustl.edu	37	6	43008685	43008685	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPL2	51069	genome.wustl.edu	37	6	43023660	43023660	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCTE1	202500	genome.wustl.edu	37	6	44247986	44247986	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKHD1	5314	genome.wustl.edu	37	6	51524037	51524037	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAM2	9697	genome.wustl.edu	37	6	52370482	52370482	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DST	667	genome.wustl.edu	37	6	56329501	56329501	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL12A1	1303	genome.wustl.edu	37	6	75828890	75828890	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDN1	23195	genome.wustl.edu	37	6	90468058	90468058	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MICAL1	64780	genome.wustl.edu	37	6	109773563	109773563	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf174	387104	genome.wustl.edu	37	6	127796470	127796470	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K5	4217	genome.wustl.edu	37	6	136913359	136913359	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UTRN	7402	genome.wustl.edu	37	6	145161876	145161876	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHG1	57480	genome.wustl.edu	37	6	151121977	151121977	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYTL3	94120	genome.wustl.edu	37	6	159084396	159084396	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGF2R	3482	genome.wustl.edu	37	6	160494395	160494395	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A3	6581	genome.wustl.edu	37	6	160831809	160831809	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K4	4216	genome.wustl.edu	37	6	161470229	161470229	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR146	115330	genome.wustl.edu	37	7	1097715	1097715	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDK1	221935	genome.wustl.edu	37	7	4167089	4167089	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPOLB	56903	genome.wustl.edu	37	7	4900522	4900522	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RSPH10B	222967	genome.wustl.edu	37	7	6005297	6005297	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPP6	51678	genome.wustl.edu	37	7	24720081	24720081	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOXA7	3204	genome.wustl.edu	37	7	27194634	27194634	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMPER	168667	genome.wustl.edu	37	7	34118685	34118685	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ELMO1	9844	genome.wustl.edu	37	7	37250990	37250990	+	Splice_Site	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLI3	2737	genome.wustl.edu	37	7	42065865	42065865	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HECW1	23072	genome.wustl.edu	37	7	43519303	43519303	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLM	27434	genome.wustl.edu	37	7	44113231	44113231	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKD1L1	168507	genome.wustl.edu	37	7	47898467	47898467	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COBL	23242	genome.wustl.edu	37	7	51111097	51111097	+	Nonstop_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VSTM2A	222008	genome.wustl.edu	37	7	54617692	54617692	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LANCL2	55915	genome.wustl.edu	37	7	55467774	55467774	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS4L1	285905	genome.wustl.edu	37	7	64646880	64646880	+	RNA	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000249319	0	genome.wustl.edu	37	7	65553846	65553846	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHTF2	57157	genome.wustl.edu	37	7	77539710	77539710	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PON1	5444	genome.wustl.edu	37	7	94931624	94931624	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TECPR1	25851	genome.wustl.edu	37	7	97853019	97853019	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AZGP1	563	genome.wustl.edu	37	7	99569369	99569369	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCM7	4176	genome.wustl.edu	37	7	99693413	99693413	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAG3	10734	genome.wustl.edu	37	7	99794894	99794894	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAG3	10734	genome.wustl.edu	37	7	99802988	99802988	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZAN	7455	genome.wustl.edu	37	7	100382434	100382434	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJB9	4189	genome.wustl.edu	37	7	108213373	108213373	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R3A	5506	genome.wustl.edu	37	7	113558547	113558547	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR37	2861	genome.wustl.edu	37	7	124386654	124386654	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OPN1SW	611	genome.wustl.edu	37	7	128415620	128415620	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLNC	2318	genome.wustl.edu	37	7	128481545	128481545	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRF5	3663	genome.wustl.edu	37	7	128582196	128582196	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM40B	57464	genome.wustl.edu	37	7	129098142	129098142	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNOT4	4850	genome.wustl.edu	37	7	135106940	135106940	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1549	57670	genome.wustl.edu	37	7	138603602	138603602	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRBV7-4	28594	genome.wustl.edu	37	7	142176751	142176751	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRSS1	5644	genome.wustl.edu	37	7	142460750	142460750	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF862	643641	genome.wustl.edu	37	7	149559061	149559061	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GIMAP1	170575	genome.wustl.edu	37	7	150417776	150417776	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GALNT11	63917	genome.wustl.edu	37	7	151810418	151810418	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL3	58508	genome.wustl.edu	37	7	151874769	151874769	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESYT2	57488	genome.wustl.edu	37	7	158560398	158560398	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TUSC3	7991	genome.wustl.edu	37	8	15517024	15517024	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFHA2	286097	genome.wustl.edu	37	8	16921706	16921706	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STC1	6781	genome.wustl.edu	37	8	23702305	23702305	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEFM	4741	genome.wustl.edu	37	8	24774948	24774948	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTK2B	2185	genome.wustl.edu	37	8	27309038	27309038	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAM9	8754	genome.wustl.edu	37	8	38934903	38934903	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKDC	5591	genome.wustl.edu	37	8	48761804	48761804	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS20	8601	genome.wustl.edu	37	8	54791979	54791979	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD7	55636	genome.wustl.edu	37	8	61768742	61768742	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD7	55636	genome.wustl.edu	37	8	61778287	61778287	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL7	3574	genome.wustl.edu	37	8	79650847	79650847	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FABP5	2171	genome.wustl.edu	37	8	82196201	82196201	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBR5	51366	genome.wustl.edu	37	8	103297490	103297490	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP12	29967	genome.wustl.edu	37	8	105509713	105509713	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TG	7038	genome.wustl.edu	37	8	133906046	133906046	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFAT	57623	genome.wustl.edu	37	8	135622826	135622826	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL22A1	169044	genome.wustl.edu	37	8	139890148	139890148	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COMMD5	28991	genome.wustl.edu	37	8	146076199	146076199	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1432	57589	genome.wustl.edu	37	9	5763200	5763200	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UHRF2	115426	genome.wustl.edu	37	9	6413516	6413516	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL9	55958	genome.wustl.edu	37	9	21333395	21333395	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOPORS	10210	genome.wustl.edu	37	9	32543128	32543128	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF24	347240	genome.wustl.edu	37	9	34297019	34297019	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRHPR	9380	genome.wustl.edu	37	9	37432012	37432012	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCART1	92014	genome.wustl.edu	37	9	37888304	37888304	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM75A3	727830	genome.wustl.edu	37	9	40704045	40704045	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM74A3	728495	genome.wustl.edu	37	9	40716026	40716026	+	RNA	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DAPK1	1612	genome.wustl.edu	37	9	90296405	90296405	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf79	286234	genome.wustl.edu	37	9	90502203	90502203	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100128771	100128771	genome.wustl.edu	37	9	98910150	98910150	+	RNA	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA1	19	genome.wustl.edu	37	9	107566905	107566905	+	Splice_Site	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNAL1	8727	genome.wustl.edu	37	9	111714732	111714732	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUSD1	64420	genome.wustl.edu	37	9	114905868	114905868	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROD1	9991	genome.wustl.edu	37	9	115060116	115060116	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5	727	genome.wustl.edu	37	9	123760010	123760010	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR1B1	347169	genome.wustl.edu	37	9	125391204	125391204	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAPVD1	26130	genome.wustl.edu	37	9	128061313	128061313	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FPGS	2356	genome.wustl.edu	37	9	130569337	130569337	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODF2	4957	genome.wustl.edu	37	9	131262462	131262462	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC8A	56262	genome.wustl.edu	37	9	131670714	131670714	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASB6	140459	genome.wustl.edu	37	9	132400170	132400170	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOR1B	27348	genome.wustl.edu	37	9	132571717	132571717	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMC3	10319	genome.wustl.edu	37	9	133914614	133914614	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBGT1	26301	genome.wustl.edu	37	9	136029008	136029008	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD3	8019	genome.wustl.edu	37	9	136901326	136901326	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBAC1	10422	genome.wustl.edu	37	9	138836987	138836987	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOTCH1	4851	genome.wustl.edu	37	9	139395086	139395086	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIP2C	22982	genome.wustl.edu	37	10	436261	436261	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C10orf18	54906	genome.wustl.edu	37	10	5791578	5791578	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM171A1	221061	genome.wustl.edu	37	10	15255162	15255162	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXDC2	84898	genome.wustl.edu	37	10	20466006	20466006	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC387646	387646	genome.wustl.edu	37	10	27537061	27537061	+	RNA	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000099251	0	genome.wustl.edu	37	10	38647276	38647276	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPRIN2	9721	genome.wustl.edu	37	10	46999914	46999914	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMPD2	143162	genome.wustl.edu	37	10	49446049	49446049	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63661940	63661940	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63852312	63852312	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HK1	3098	genome.wustl.edu	37	10	71136805	71136805	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH23	64072	genome.wustl.edu	37	10	73563053	73563053	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP3CB	5532	genome.wustl.edu	37	10	75231318	75231318	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAMD8	142891	genome.wustl.edu	37	10	76924436	76924436	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLR3A	11128	genome.wustl.edu	37	10	79769401	79769401	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLUD1	2746	genome.wustl.edu	37	10	88836378	88836378	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89720741	89720741	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFIT5	24138	genome.wustl.edu	37	10	91177167	91177167	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCGF5	84333	genome.wustl.edu	37	10	93008435	93008435	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLCE1	51196	genome.wustl.edu	37	10	95994018	95994018	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLIT1	6585	genome.wustl.edu	37	10	98761034	98761034	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC2	1244	genome.wustl.edu	37	10	101560266	101560266	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBF1	8729	genome.wustl.edu	37	10	104123022	104123022	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUFU	51684	genome.wustl.edu	37	10	104309851	104309851	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC147	159686	genome.wustl.edu	37	10	106125669	106125669	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORCS1	114815	genome.wustl.edu	37	10	108427525	108427525	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPL13AP6	644511	genome.wustl.edu	37	10	112696704	112696704	+	RNA	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRAP	4892	genome.wustl.edu	37	10	115391645	115391645	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPAPDC1A	196051	genome.wustl.edu	37	10	122278345	122278345	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIC8A	60626	genome.wustl.edu	37	11	212920	212920	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC5B	727897	genome.wustl.edu	37	11	1264230	1264230	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP5-1	387264	genome.wustl.edu	37	11	1605933	1605933	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCHS1	8642	genome.wustl.edu	37	11	6646599	6646599	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF4G2	1982	genome.wustl.edu	37	11	10823260	10823260	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MICALCL	84953	genome.wustl.edu	37	11	12313763	12313763	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LDHC	3948	genome.wustl.edu	37	11	18434390	18434390	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LDHC	3948	genome.wustl.edu	37	11	18436758	18436758	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3M	10480	genome.wustl.edu	37	11	32615480	32615480	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST1	8534	genome.wustl.edu	37	11	45672090	45672090	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4C2P	119750	genome.wustl.edu	37	11	48441911	48441911	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR8K3	219473	genome.wustl.edu	37	11	56086683	56086683	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5M10	390167	genome.wustl.edu	37	11	56345167	56345167	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APLNR	187	genome.wustl.edu	37	11	57003463	57003463	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC5	25921	genome.wustl.edu	37	11	57466083	57466083	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MS4A13	503497	genome.wustl.edu	37	11	60292794	60292794	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGA3	643834	genome.wustl.edu	37	11	60971063	60971063	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A9	114571	genome.wustl.edu	37	11	63177326	63177326	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STIP1	10963	genome.wustl.edu	37	11	63962067	63962067	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAALADL1	10004	genome.wustl.edu	37	11	64812878	64812878	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CORO1B	57175	genome.wustl.edu	37	11	67208702	67208702	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRGPRD	116512	genome.wustl.edu	37	11	68748083	68748083	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINH1	871	genome.wustl.edu	37	11	75277662	75277662	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINH1	871	genome.wustl.edu	37	11	75282833	75282833	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLG2	1740	genome.wustl.edu	37	11	84027875	84027875	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT3	120114	genome.wustl.edu	37	11	92599975	92599975	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM4D	55693	genome.wustl.edu	37	11	94730840	94730840	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMP27	64066	genome.wustl.edu	37	11	102562587	102562587	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATM	472	genome.wustl.edu	37	11	108186827	108186827	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATM	472	genome.wustl.edu	37	11	108216609	108216609	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZC3H12C	85463	genome.wustl.edu	37	11	110035624	110035624	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCPS	28960	genome.wustl.edu	37	11	126174027	126174027	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCP1B	196513	genome.wustl.edu	37	12	2062350	2062350	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD9	928	genome.wustl.edu	37	12	6344728	6344728	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EMG1	10436	genome.wustl.edu	37	12	7080234	7080234	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDKN1B	1027	genome.wustl.edu	37	12	12870837	12870837	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IPO8	10526	genome.wustl.edu	37	12	30843490	30843490	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX11	1663	genome.wustl.edu	37	12	31244705	31244705	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PFKM	5213	genome.wustl.edu	37	12	48535728	48535728	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACCN2	41	genome.wustl.edu	37	12	50452691	50452691	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT1	3848	genome.wustl.edu	37	12	53070923	53070923	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATF7	11016	genome.wustl.edu	37	12	53917071	53917071	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDE1B	5153	genome.wustl.edu	37	12	54964070	54964070	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WIBG	84305	genome.wustl.edu	37	12	56297213	56297213	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IKZF4	64375	genome.wustl.edu	37	12	56428877	56428877	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESYT1	23344	genome.wustl.edu	37	12	56532241	56532241	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MON2	23041	genome.wustl.edu	37	12	62959121	62959121	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LEMD3	23592	genome.wustl.edu	37	12	65634798	65634798	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL26	55801	genome.wustl.edu	37	12	68619273	68619273	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAV3	89795	genome.wustl.edu	37	12	78571410	78571410	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPFIA2	8499	genome.wustl.edu	37	12	81839382	81839382	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000227825	0	genome.wustl.edu	37	12	98849257	98849257	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WSCD2	9671	genome.wustl.edu	37	12	108620780	108620780	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSH1	54434	genome.wustl.edu	37	12	109186539	109186539	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM116	89894	genome.wustl.edu	37	12	112369575	112369575	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CIT	11113	genome.wustl.edu	37	12	120150421	120150421	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM2B	84678	genome.wustl.edu	37	12	121987468	121987468	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
B3GNT4	79369	genome.wustl.edu	37	12	122691003	122691003	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SFSWAP	6433	genome.wustl.edu	37	12	132211525	132211525	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF2P1	266695	genome.wustl.edu	37	13	19622171	19622171	+	RNA	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMYM2	7750	genome.wustl.edu	37	13	20632822	20632822	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GJB2	2706	genome.wustl.edu	37	13	20763690	20763690	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PABPC3	5042	genome.wustl.edu	37	13	25671837	25671837	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRY	10129	genome.wustl.edu	37	13	32783153	32783153	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSNK1A1L	122011	genome.wustl.edu	37	13	37679199	37679199	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHFP	10186	genome.wustl.edu	37	13	39952645	39952645	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A15	10166	genome.wustl.edu	37	13	41373280	41373280	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIAPH3	81624	genome.wustl.edu	37	13	60453407	60453407	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM26	64062	genome.wustl.edu	37	13	79940321	79940321	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TM9SF2	9375	genome.wustl.edu	37	13	100153989	100153989	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NALCN	259232	genome.wustl.edu	37	13	101944628	101944628	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIG4	3981	genome.wustl.edu	37	13	108862191	108862191	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO16	23026	genome.wustl.edu	37	13	109779690	109779690	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IPO4	79711	genome.wustl.edu	37	14	24652526	24652526	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NYNRIN	57523	genome.wustl.edu	37	14	24880575	24880575	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000250370	0	genome.wustl.edu	37	14	31354988	31354988	+	RNA	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPAS3	64067	genome.wustl.edu	37	14	34243680	34243680	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CFL2	1073	genome.wustl.edu	37	14	35182459	35182459	+	Splice_Site	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNN	5411	genome.wustl.edu	37	14	39649880	39649880	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPF39	55015	genome.wustl.edu	37	14	45564489	45564489	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIN	51199	genome.wustl.edu	37	14	51238089	51238089	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GMFB	2764	genome.wustl.edu	37	14	54950424	54950424	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB25	7597	genome.wustl.edu	37	14	64954442	64954442	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTB	6710	genome.wustl.edu	37	14	65253879	65253879	+	Splice_Site	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF5	8816	genome.wustl.edu	37	14	69558513	69558513	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIPA1L1	26037	genome.wustl.edu	37	14	72056005	72056005	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEK9	91754	genome.wustl.edu	37	14	75562102	75562102	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf118	55668	genome.wustl.edu	37	14	76621125	76621125	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VIPAR	63894	genome.wustl.edu	37	14	77919683	77919683	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPSF2	53981	genome.wustl.edu	37	14	92627523	92627523	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIN3	79890	genome.wustl.edu	37	14	93107605	93107605	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOLGA5	9950	genome.wustl.edu	37	14	93263849	93263849	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPK1	3705	genome.wustl.edu	37	14	93460301	93460301	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG2B	55102	genome.wustl.edu	37	14	96784189	96784189	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP46A1	10858	genome.wustl.edu	37	14	100188308	100188308	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1H1	1778	genome.wustl.edu	37	14	102495903	102495903	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R13B	23368	genome.wustl.edu	37	14	104206784	104206784	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR132	29933	genome.wustl.edu	37	14	105521734	105521734	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRF1	2972	genome.wustl.edu	37	14	105685575	105685575	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHG1	3500	genome.wustl.edu	37	14	106206433	106206433	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHV3-43	28426	genome.wustl.edu	37	14	106926401	106926401	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDN	4692	genome.wustl.edu	37	15	23931941	23931941	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP10A	57194	genome.wustl.edu	37	15	25959252	25959252	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OCA2	4948	genome.wustl.edu	37	15	28228541	28228541	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP11B	89839	genome.wustl.edu	37	15	30927692	30927692	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTBN5	51332	genome.wustl.edu	37	15	42171576	42171576	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORD	6652	genome.wustl.edu	37	15	45353270	45353270	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP152	22995	genome.wustl.edu	37	15	49048120	49048120	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIGB	9488	genome.wustl.edu	37	15	55612548	55612548	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR422A	494334	genome.wustl.edu	37	15	64163132	64163132	+	RNA	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR1272	100302184	genome.wustl.edu	37	15	65054696	65054696	+	RNA	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IQCH	64799	genome.wustl.edu	37	15	67692501	67692501	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP11A1	1583	genome.wustl.edu	37	15	74635450	74635450	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPI	4351	genome.wustl.edu	37	15	75182953	75182953	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FANCI	55215	genome.wustl.edu	37	15	89843577	89843577	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLCO3A1	28232	genome.wustl.edu	37	15	92459361	92459361	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRK1	79705	genome.wustl.edu	37	15	101605686	101605686	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AXIN1	8312	genome.wustl.edu	37	16	396589	396589	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMOX2	3163	genome.wustl.edu	37	16	4557995	4557995	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEKT5	146279	genome.wustl.edu	37	16	10721610	10721610	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CIITA	4261	genome.wustl.edu	37	16	11001471	11001471	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLEC16A	23274	genome.wustl.edu	37	16	11272483	11272483	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPPED1	55313	genome.wustl.edu	37	16	12758860	12758860	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYT17	51760	genome.wustl.edu	37	16	19195208	19195208	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC5	79838	genome.wustl.edu	37	16	19475197	19475197	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNRC6A	27327	genome.wustl.edu	37	16	24835005	24835005	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATXN2L	11273	genome.wustl.edu	37	16	28838193	28838193	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRN3P2	653390	genome.wustl.edu	37	16	29110458	29110458	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF720	124411	genome.wustl.edu	37	16	31733952	31733952	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMP2	4313	genome.wustl.edu	37	16	55522489	55522489	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH1	999	genome.wustl.edu	37	16	68857362	68857362	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000205152	0	genome.wustl.edu	37	16	70265334	70265334	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC283922	283922	genome.wustl.edu	37	16	74371389	74371389	+	RNA	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST5	23563	genome.wustl.edu	37	16	75563170	75563170	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAT1	23536	genome.wustl.edu	37	16	75654164	75654164	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000232329	0	genome.wustl.edu	37	16	81142175	81142175	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNG4	93107	genome.wustl.edu	37	16	84256074	84256074	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCARF1	8578	genome.wustl.edu	37	17	1538710	1538710	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR1A2	26189	genome.wustl.edu	37	17	3101038	3101038	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR1E2	8388	genome.wustl.edu	37	17	3336748	3336748	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WSCD1	23302	genome.wustl.edu	37	17	6023654	6023654	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLEC10A	10462	genome.wustl.edu	37	17	6978707	6978707	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEURL4	84461	genome.wustl.edu	37	17	7224913	7224913	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYB5D1	124637	genome.wustl.edu	37	17	7762002	7762002	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF15	22899	genome.wustl.edu	37	17	8222125	8222125	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R5	23533	genome.wustl.edu	37	17	8791556	8791556	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH1	4619	genome.wustl.edu	37	17	10404777	10404777	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCOR1	9611	genome.wustl.edu	37	17	16001708	16001708	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIGL	9487	genome.wustl.edu	37	17	16229178	16229178	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHMT1	6470	genome.wustl.edu	37	17	18251702	18251702	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSH2	85464	genome.wustl.edu	37	17	27959571	27959571	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO19	80179	genome.wustl.edu	37	17	34862952	34862952	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT33B	3884	genome.wustl.edu	37	17	39521059	39521059	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT35	3886	genome.wustl.edu	37	17	39636983	39636983	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC4A1	6521	genome.wustl.edu	37	17	42331904	42331904	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLCD3	113026	genome.wustl.edu	37	17	43190566	43190566	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KAT7	11143	genome.wustl.edu	37	17	47904070	47904070	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYCBPAP	84073	genome.wustl.edu	37	17	48594768	48594768	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPX	8288	genome.wustl.edu	37	17	56280666	56280666	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF43	54894	genome.wustl.edu	37	17	56492875	56492875	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX14	56155	genome.wustl.edu	37	17	56665301	56665301	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNH6	81033	genome.wustl.edu	37	17	61622450	61622450	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FTSJ3	117246	genome.wustl.edu	37	17	61899116	61899116	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN4A	6329	genome.wustl.edu	37	17	62034671	62034671	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000214176	0	genome.wustl.edu	37	17	62820964	62820964	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNRC6C	57690	genome.wustl.edu	37	17	76060930	76060930	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENPP7	339221	genome.wustl.edu	37	17	77709122	77709122	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D16	125058	genome.wustl.edu	37	17	77921611	77921611	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC38A10	124565	genome.wustl.edu	37	17	79249914	79249914	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC57	284001	genome.wustl.edu	37	17	80153187	80153187	+	Silent	SNP	A	A	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TWSG1	57045	genome.wustl.edu	37	18	9399351	9399351	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729602	729602	genome.wustl.edu	37	18	11621122	11621122	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GATA6	2627	genome.wustl.edu	37	18	19780733	19780733	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMA3	3909	genome.wustl.edu	37	18	21437853	21437853	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC39C	125488	genome.wustl.edu	37	18	21703899	21703899	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC39A6	25800	genome.wustl.edu	37	18	33696636	33696636	+	Splice_Site	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB7C	201501	genome.wustl.edu	37	18	45567179	45567179	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCF4	6925	genome.wustl.edu	37	18	52896159	52896159	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCF4	6925	genome.wustl.edu	37	18	53018187	53018187	+	Silent	SNP	A	A	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR7	23335	genome.wustl.edu	37	18	54547241	54547241	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH7	1005	genome.wustl.edu	37	18	63477133	63477133	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLIN4	729359	genome.wustl.edu	37	19	4511071	4511071	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFAIP8L1	126282	genome.wustl.edu	37	19	4651884	4651884	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAFB	6294	genome.wustl.edu	37	19	5653199	5653199	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLLT1	4298	genome.wustl.edu	37	19	6270618	6270618	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A23	79085	genome.wustl.edu	37	19	6454634	6454634	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VAV1	7409	genome.wustl.edu	37	19	6848059	6848059	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF557	79230	genome.wustl.edu	37	19	7075116	7075116	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INSR	3643	genome.wustl.edu	37	19	7267491	7267491	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC16	94025	genome.wustl.edu	37	19	9090009	9090009	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ICAM3	3385	genome.wustl.edu	37	19	10445855	10445855	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TYK2	7297	genome.wustl.edu	37	19	10461823	10461823	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TYK2	7297	genome.wustl.edu	37	19	10475409	10475409	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCA4	6597	genome.wustl.edu	37	19	11123752	11123752	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNPO2	30000	genome.wustl.edu	37	19	12822220	12822220	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAST1	22983	genome.wustl.edu	37	19	12969367	12969367	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAST1	22983	genome.wustl.edu	37	19	12979907	12979907	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX39A	10212	genome.wustl.edu	37	19	14523391	14523391	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYDE1	85360	genome.wustl.edu	37	19	15224565	15224565	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UPF1	5976	genome.wustl.edu	37	19	18966854	18966854	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF93	81931	genome.wustl.edu	37	19	20044492	20044492	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF431	170959	genome.wustl.edu	37	19	21350428	21350428	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000213974	0	genome.wustl.edu	37	19	22785451	22785451	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC440518	440518	genome.wustl.edu	37	19	22785822	22785822	+	RNA	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF675	171392	genome.wustl.edu	37	19	23836179	23836179	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD27	84079	genome.wustl.edu	37	19	33130328	33130328	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPATCH1	55094	genome.wustl.edu	37	19	33586690	33586690	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD22	933	genome.wustl.edu	37	19	35829328	35829328	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf55	148137	genome.wustl.edu	37	19	36252950	36252950	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP33	115703	genome.wustl.edu	37	19	36276147	36276147	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX7A1	1346	genome.wustl.edu	37	19	36642409	36642409	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF461	92283	genome.wustl.edu	37	19	37130376	37130376	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF585B	92285	genome.wustl.edu	37	19	37677370	37677370	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GGN	199720	genome.wustl.edu	37	19	38876172	38876172	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHG2	64857	genome.wustl.edu	37	19	39914682	39914682	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2F1	1572	genome.wustl.edu	37	19	41622225	41622225	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HNRNPUL1	11100	genome.wustl.edu	37	19	41798387	41798387	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEGF8	1954	genome.wustl.edu	37	19	42839244	42839244	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF283	284349	genome.wustl.edu	37	19	44351863	44351863	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIG1	3978	genome.wustl.edu	37	19	48619155	48619155	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC5	8778	genome.wustl.edu	37	19	52131127	52131127	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HAS1	3036	genome.wustl.edu	37	19	52217292	52217292	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF841	284371	genome.wustl.edu	37	19	52570447	52570447	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DEFB126	81623	genome.wustl.edu	37	20	126191	126191	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC2	117532	genome.wustl.edu	37	20	2591104	2591104	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPXM1	56265	genome.wustl.edu	37	20	2776337	2776337	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTBD3	22903	genome.wustl.edu	37	20	11903546	11903546	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTBD3	22903	genome.wustl.edu	37	20	11903891	11903891	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf7	79133	genome.wustl.edu	37	20	13789531	13789531	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLK1S1	55857	genome.wustl.edu	37	20	21142725	21142725	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
E2F1	1869	genome.wustl.edu	37	20	32265093	32265093	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSS	2937	genome.wustl.edu	37	20	33533805	33533805	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH7B	57644	genome.wustl.edu	37	20	33584523	33584523	+	Silent	SNP	T	T	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R16B	26051	genome.wustl.edu	37	20	37546827	37546827	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZSWIM3	140831	genome.wustl.edu	37	20	44506264	44506264	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF335	63925	genome.wustl.edu	37	20	44580951	44580951	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARFGEF2	10564	genome.wustl.edu	37	20	47626792	47626792	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX27	55661	genome.wustl.edu	37	20	47845263	47845263	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM65C	140876	genome.wustl.edu	37	20	49221198	49221198	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNAS	2778	genome.wustl.edu	37	20	57415727	57415727	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH26	60437	genome.wustl.edu	37	20	58560066	58560066	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPL39	54148	genome.wustl.edu	37	21	26978959	26978959	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TIAM1	7074	genome.wustl.edu	37	21	32638961	32638961	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNJ1	8867	genome.wustl.edu	37	21	34015756	34015756	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DONSON	29980	genome.wustl.edu	37	21	34953768	34953768	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSCR3	10311	genome.wustl.edu	37	21	38600086	38600086	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL18A1	80781	genome.wustl.edu	37	21	46888523	46888523	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC45	8318	genome.wustl.edu	37	22	19495353	19495353	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED15	51586	genome.wustl.edu	37	22	20939198	20939198	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCN2	6948	genome.wustl.edu	37	22	31011718	31011718	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIMK2	3985	genome.wustl.edu	37	22	31661933	31661933	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC5A4	6527	genome.wustl.edu	37	22	32616924	32616924	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APOBEC3B	9582	genome.wustl.edu	37	22	39388407	39388407	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000215642	0	genome.wustl.edu	37	GL000192.1	123046	123046	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000211459	0	genome.wustl.edu	37	MT	727	727	+	RNA	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STS	412	genome.wustl.edu	37	X	7268151	7268151	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHROOM2	357	genome.wustl.edu	37	X	9912913	9912913	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLCN4	1183	genome.wustl.edu	37	X	10188720	10188720	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH3KBP1	30011	genome.wustl.edu	37	X	19606544	19606544	+	Silent	SNP	C	C	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX53	168400	genome.wustl.edu	37	X	23019918	23019918	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL1RAPL1	11141	genome.wustl.edu	37	X	29973827	29973827	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXorf27	25763	genome.wustl.edu	37	X	37850192	37850192	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCOR	54880	genome.wustl.edu	37	X	39922961	39922961	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDK16	5127	genome.wustl.edu	37	X	47085410	47085410	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSX3	10214	genome.wustl.edu	37	X	48206940	48206940	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM3	5935	genome.wustl.edu	37	X	48435516	48435516	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLCN5	1184	genome.wustl.edu	37	X	49851169	49851169	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKK	139189	genome.wustl.edu	37	X	50119832	50119832	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMC1A	8243	genome.wustl.edu	37	X	53439001	53439001	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM104B	90736	genome.wustl.edu	37	X	55172586	55172586	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZXDA	7789	genome.wustl.edu	37	X	57935316	57935316	+	Silent	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX11	56159	genome.wustl.edu	37	X	69773239	69773239	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL2RG	3561	genome.wustl.edu	37	X	70327598	70327598	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMYM3	9203	genome.wustl.edu	37	X	70464252	70464252	+	Silent	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF1	6872	genome.wustl.edu	37	X	70613215	70613215	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATRX	546	genome.wustl.edu	37	X	76907772	76907772	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POU3F4	5456	genome.wustl.edu	37	X	82764246	82764246	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BEX2	84707	genome.wustl.edu	37	X	102564786	102564786	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC643873	643873	genome.wustl.edu	37	X	110864262	110864262	+	RNA	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC642357	642357	genome.wustl.edu	37	X	114937592	114937592	+	RNA	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1210	57481	genome.wustl.edu	37	X	118223601	118223601	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOXF2	84528	genome.wustl.edu	37	X	119293294	119293294	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THOC2	57187	genome.wustl.edu	37	X	122765552	122765552	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THOC2	57187	genome.wustl.edu	37	X	122866864	122866864	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ1	10178	genome.wustl.edu	37	X	123654620	123654620	+	Silent	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PASD1	139135	genome.wustl.edu	37	X	150844532	150844532	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
L1CAM	3897	genome.wustl.edu	37	X	153133822	153133822	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf159	54991	genome.wustl.edu	37	1	1019487	1019487	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC2A5	6518	genome.wustl.edu	37	1	9097982	9097982	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR2	1952	genome.wustl.edu	37	1	109815318	109815318	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNF1	3754	genome.wustl.edu	37	2	11053432	11053432	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF5C	3800	genome.wustl.edu	37	2	149854983	149854983	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCBP4	57060	genome.wustl.edu	37	3	51992316	51992316	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMOTL2	51421	genome.wustl.edu	37	3	134089809	134089809	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPR3	3710	genome.wustl.edu	37	6	33646519	33646519	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS4L2	644619	genome.wustl.edu	37	7	65157815	65157815	+	RNA	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC728377	728377	genome.wustl.edu	37	7	143979564	143979564	+	RNA	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COPS5	10987	genome.wustl.edu	37	8	67968764	67968764	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXD4L5	653427	genome.wustl.edu	37	9	70177705	70177705	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTF3C5	9328	genome.wustl.edu	37	9	135933232	135933232	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1B	774	genome.wustl.edu	37	9	141014730	141014730	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYT15	83849	genome.wustl.edu	37	10	46968715	46968715	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNNT3	7140	genome.wustl.edu	37	11	1959705	1959705	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35C1	55343	genome.wustl.edu	37	11	45832387	45832387	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PACSIN3	29763	genome.wustl.edu	37	11	47199520	47199520	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASGRP2	10235	genome.wustl.edu	37	11	64503388	64503388	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACY3	91703	genome.wustl.edu	37	11	67410358	67410358	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINH1	871	genome.wustl.edu	37	11	75277520	75277520	+	Silent	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO7A	4647	genome.wustl.edu	37	11	76871323	76871323	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000248800	0	genome.wustl.edu	37	15	55470247	55470247	+	RNA	SNP	T	T	C			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS35	55737	genome.wustl.edu	37	16	46706238	46706238	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFHX3	463	genome.wustl.edu	37	16	72923834	72923834	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNJ12	3768	genome.wustl.edu	37	17	21319341	21319341	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIRT7	51547	genome.wustl.edu	37	17	79872370	79872370	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FSD1	79187	genome.wustl.edu	37	19	4307924	4307924	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0355	9710	genome.wustl.edu	37	19	34842430	34842430	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSF2RB	1439	genome.wustl.edu	37	22	37318319	37318319	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIR2DL5B	553128	genome.wustl.edu	37	GL000209.1	35881	35881	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITIH5L	347365	genome.wustl.edu	37	X	54815006	54815006	+	Silent	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP73	7161	genome.wustl.edu	37	1	3646013	3646013	+	Splice_Site	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLGAP3	58512	genome.wustl.edu	37	1	35370731	35370731	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGIP1	84251	genome.wustl.edu	37	1	67101686	67101686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A24	29957	genome.wustl.edu	37	1	108700183	108700183	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OTUD7B	56957	genome.wustl.edu	37	1	149916135	149916135	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF687	57592	genome.wustl.edu	37	1	151261987	151261988	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLG2	388698	genome.wustl.edu	37	1	152324558	152324559	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	TG	TG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DENND4B	9909	genome.wustl.edu	37	1	153906129	153906129	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLAMF9	89886	genome.wustl.edu	37	1	159922139	159922139	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF8	50717	genome.wustl.edu	37	1	160209765	160209765	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM5B	57795	genome.wustl.edu	37	1	177247836	177247836	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHA6	22874	genome.wustl.edu	37	1	204228411	204228411	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIEXF	27042	genome.wustl.edu	37	1	210016803	210016803	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR5	7100	genome.wustl.edu	37	1	223285771	223285771	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RTN4	57142	genome.wustl.edu	37	2	55253228	55253228	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP68	23177	genome.wustl.edu	37	2	65298926	65298926	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEMA4F	10505	genome.wustl.edu	37	2	74902018	74902018	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF5B	9669	genome.wustl.edu	37	2	99976805	99976805	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKAR	150709	genome.wustl.edu	37	2	190541315	190541315	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf67	151050	genome.wustl.edu	37	2	210887680	210887680	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MARCH4	57574	genome.wustl.edu	37	2	217234726	217234726	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SP140L	93349	genome.wustl.edu	37	2	231191994	231191994	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GALNTL2	117248	genome.wustl.edu	37	3	16217061	16217062	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBP1	7342	genome.wustl.edu	37	3	33467210	33467210	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR48	57599	genome.wustl.edu	37	3	39125743	39125744	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR3	1951	genome.wustl.edu	37	3	48698223	48698224	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHDH	55349	genome.wustl.edu	37	3	53852170	53852170	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C3orf67	200844	genome.wustl.edu	37	3	58899405	58899405	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL8A1	1295	genome.wustl.edu	37	3	99514534	99514534	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXND1	23129	genome.wustl.edu	37	3	129286424	129286427	+	Frame_Shift_Del	DEL	TGTC	TGTC	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	TGTC	TGTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCHE	590	genome.wustl.edu	37	3	165548196	165548196	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP19	84984	genome.wustl.edu	37	3	196434521	196434523	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRMP1	1400	genome.wustl.edu	37	4	5823521	5823521	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR19	57728	genome.wustl.edu	37	4	39206804	39206804	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRYL	285527	genome.wustl.edu	37	4	48636435	48636435	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX18	285521	genome.wustl.edu	37	4	73927617	73927617	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC24D	9871	genome.wustl.edu	37	4	119678883	119678883	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAD2L1	4085	genome.wustl.edu	37	4	120981393	120981393	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIPBL	25836	genome.wustl.edu	37	5	37008133	37008134	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000244801	0	genome.wustl.edu	37	5	79286372	79286372	+	RNA	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFYVE16	9765	genome.wustl.edu	37	5	79732784	79732785	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF608	57507	genome.wustl.edu	37	5	123979362	123979363	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	GA	GA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL5	3567	genome.wustl.edu	37	5	131878787	131878787	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD8	10902	genome.wustl.edu	37	5	137504219	137504219	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR55	54853	genome.wustl.edu	37	5	140049102	140049102	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NSD1	64324	genome.wustl.edu	37	5	176638869	176638869	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DST	667	genome.wustl.edu	37	6	56470905	56470905	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf204	387119	genome.wustl.edu	37	6	118803033	118803034	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYB	4602	genome.wustl.edu	37	6	135518338	135518338	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TULP4	56995	genome.wustl.edu	37	6	158923753	158923753	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IQCE	23288	genome.wustl.edu	37	7	2641074	2641075	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPY19L2P1	554236	genome.wustl.edu	37	7	35131318	35131318	+	RNA	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HECW1	23072	genome.wustl.edu	37	7	43484126	43484126	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF273	10793	genome.wustl.edu	37	7	64388547	64388547	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRIT1	889	genome.wustl.edu	37	7	91855911	91855913	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	GAG	GAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC17	10234	genome.wustl.edu	37	7	102584863	102584863	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RINT1	60561	genome.wustl.edu	37	7	105187677	105187677	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF800	168850	genome.wustl.edu	37	7	127017274	127017274	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP205	23165	genome.wustl.edu	37	7	135282800	135282800	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC7A2	6542	genome.wustl.edu	37	8	17402081	17402081	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF395	55893	genome.wustl.edu	37	8	28210808	28210809	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOL6	65083	genome.wustl.edu	37	9	33466939	33466939	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM75A6	389730	genome.wustl.edu	37	9	43626190	43626191	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR38	401551	genome.wustl.edu	37	9	127618537	127618538	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C10orf71	118461	genome.wustl.edu	37	10	50532694	50532695	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCAR1	55749	genome.wustl.edu	37	10	70548076	70548077	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC5B	727897	genome.wustl.edu	37	11	1267994	1267994	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR52E2	119678	genome.wustl.edu	37	11	5079911	5079911	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SWAP70	23075	genome.wustl.edu	37	11	9750920	9750921	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP47	55031	genome.wustl.edu	37	11	11951042	11951044	+	In_Frame_Del	DEL	ATT	ATT	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	ATT	ATT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARFGAP2	84364	genome.wustl.edu	37	11	47196853	47196853	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAA40	79829	genome.wustl.edu	37	11	63720018	63720018	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RELA	5970	genome.wustl.edu	37	11	65422046	65422046	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLC2	64837	genome.wustl.edu	37	11	66032658	66032658	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMP3	4314	genome.wustl.edu	37	11	102713563	102713563	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK7	9159	genome.wustl.edu	37	11	117100413	117100414	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF9B	22997	genome.wustl.edu	37	11	133801456	133801456	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THYN1	29087	genome.wustl.edu	37	11	134118753	134118753	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGF23	8074	genome.wustl.edu	37	12	4479697	4479697	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD69	969	genome.wustl.edu	37	12	9907642	9907642	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATF7IP	55729	genome.wustl.edu	37	12	14577802	14577802	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLCZ1	89869	genome.wustl.edu	37	12	18854468	18854469	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAPRIN2	65981	genome.wustl.edu	37	12	30906412	30906412	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM186A	121006	genome.wustl.edu	37	12	50747821	50747821	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNFT2	84900	genome.wustl.edu	37	12	117187871	117187871	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VSIG10	54621	genome.wustl.edu	37	12	118504457	118504459	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZC3H13	23091	genome.wustl.edu	37	13	46543661	46543661	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RB1	5925	genome.wustl.edu	37	13	49030367	49030368	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIAPH3	81624	genome.wustl.edu	37	13	60385030	60385030	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R5E	5529	genome.wustl.edu	37	14	64006378	64006380	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	GGA	GGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf43	91748	genome.wustl.edu	37	14	74196464	74196464	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEL1L	6400	genome.wustl.edu	37	14	81964254	81964254	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC88C	440193	genome.wustl.edu	37	14	91755507	91755507	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX8C	341947	genome.wustl.edu	37	14	93814398	93814398	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASB2	51676	genome.wustl.edu	37	14	94405646	94405646	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1H1	1778	genome.wustl.edu	37	14	102445788	102445788	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAR-SN	347746	genome.wustl.edu	37	15	25227495	25227496	+	RNA	DEL	AA	AA	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNORD116-4	100033416	genome.wustl.edu	37	15	25304700	25304700	+	RNA	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000252277	0	genome.wustl.edu	37	15	25353432	25353432	+	RNA	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STRC	161497	genome.wustl.edu	37	15	43993552	43993552	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF111	54778	genome.wustl.edu	37	15	59376343	59376343	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF23	9493	genome.wustl.edu	37	15	69708296	69708296	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEX3B	84206	genome.wustl.edu	37	15	82336249	82336249	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEX3B	84206	genome.wustl.edu	37	15	82336383	82336383	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP13	11214	genome.wustl.edu	37	15	86077163	86077163	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC45A	55898	genome.wustl.edu	37	15	91479413	91479413	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CIITA	4261	genome.wustl.edu	37	16	10995900	10995900	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH16	1014	genome.wustl.edu	37	16	66946742	66946742	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFHX3	463	genome.wustl.edu	37	16	72827804	72827804	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFP3	124961	genome.wustl.edu	37	17	4994995	4994996	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	GA	GA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFCAB5	374786	genome.wustl.edu	37	17	28381009	28381009	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNP	1267	genome.wustl.edu	37	17	40125744	40125744	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMNL1	752	genome.wustl.edu	37	17	43309755	43309755	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644157	644157	genome.wustl.edu	37	17	43663214	43663214	+	RNA	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBX4	9496	genome.wustl.edu	37	17	59560345	59560345	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRIP1	83990	genome.wustl.edu	37	17	59761460	59761460	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENGASE	64772	genome.wustl.edu	37	17	77081357	77081357	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF213	57674	genome.wustl.edu	37	17	78320576	78320576	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COLEC12	81035	genome.wustl.edu	37	18	335179	335179	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD209	30835	genome.wustl.edu	37	19	7806378	7806378	+	RNA	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF66P	7617	genome.wustl.edu	37	19	20988745	20988745	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF430	80264	genome.wustl.edu	37	19	21216984	21216984	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL4	9757	genome.wustl.edu	37	19	36223002	36223002	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX34	9704	genome.wustl.edu	37	19	47865895	47865895	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP12	91662	genome.wustl.edu	37	19	54310804	54310804	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP7	199713	genome.wustl.edu	37	19	55452994	55452994	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRNP	5621	genome.wustl.edu	37	20	4680448	4680448	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR644	693229	genome.wustl.edu	37	20	33054130	33054130	+	RNA	DEL	T	T	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf132	140699	genome.wustl.edu	37	20	35802422	35802423	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNBL1	56259	genome.wustl.edu	37	20	36361416	36361416	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTI1	9675	genome.wustl.edu	37	20	36627613	36627613	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFATC2	4773	genome.wustl.edu	37	20	50048783	50048783	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF831	128611	genome.wustl.edu	37	20	57766702	57766702	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH26	60437	genome.wustl.edu	37	20	58562632	58562633	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRIP1	8204	genome.wustl.edu	37	21	16338588	16338588	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERG	2078	genome.wustl.edu	37	21	39755427	39755427	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIOBP	11078	genome.wustl.edu	37	22	38119549	38119549	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDELR3	11015	genome.wustl.edu	37	22	38875737	38875738	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC391334	391334	genome.wustl.edu	37	22	41470048	41470048	+	RNA	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CERK	64781	genome.wustl.edu	37	22	47116899	47116900	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210196	0	genome.wustl.edu	37	MT	15966	15967	+	RNA	INS	-	-	G			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX11	56159	genome.wustl.edu	37	X	70127618	70127618	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB40A	142684	genome.wustl.edu	37	X	102754919	102754920	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL1RAPL2	26280	genome.wustl.edu	37	X	104512141	104512143	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-AP-A0LT-01	TCGA-AP-A0LT-01	AAG	AAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
