Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CCDC27	148870	genome.wustl.edu	37	1	3679934	3679934	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHC2	1912	genome.wustl.edu	37	1	33795739	33795739	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGM1	5236	genome.wustl.edu	37	1	64089430	64089430	+	Missense_Mutation	SNP	G	G	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PALMD	54873	genome.wustl.edu	37	1	100154788	100154788	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100129138	100129138	genome.wustl.edu	37	1	104616052	104616052	+	RNA	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR77	79084	genome.wustl.edu	37	1	111990091	111990091	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD160	11126	genome.wustl.edu	37	1	145704052	145704052	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCAN	63827	genome.wustl.edu	37	1	156626136	156626136	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH2D2A	9047	genome.wustl.edu	37	1	156785879	156785879	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP1A2	477	genome.wustl.edu	37	1	160097393	160097393	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LMX1A	4009	genome.wustl.edu	37	1	165218837	165218837	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR199A2	406977	genome.wustl.edu	37	1	172113757	172113757	+	RNA	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRELP	5549	genome.wustl.edu	37	1	203452495	203452495	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFASC	23114	genome.wustl.edu	37	1	204948557	204948557	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USH2A	7399	genome.wustl.edu	37	1	216017814	216017814	+	Missense_Mutation	SNP	T	T	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUSD4	55061	genome.wustl.edu	37	1	223396819	223396819	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF496	84838	genome.wustl.edu	37	1	247464264	247464264	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNMT3A	1788	genome.wustl.edu	37	2	25457158	25457158	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAD	790	genome.wustl.edu	37	2	27460967	27460967	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEB	4703	genome.wustl.edu	37	2	152359956	152359956	+	Splice_Site	SNP	C	C	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC642635	642635	genome.wustl.edu	37	2	154277608	154277608	+	RNA	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAD1	2571	genome.wustl.edu	37	2	171716238	171716238	+	Missense_Mutation	SNP	C	C	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179453672	179453672	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HECW2	57520	genome.wustl.edu	37	2	197184005	197184005	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOP58	51602	genome.wustl.edu	37	2	203165016	203165016	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGFBP2	3485	genome.wustl.edu	37	2	217526640	217526640	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCB6	10058	genome.wustl.edu	37	2	220077769	220077769	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCB6	10058	genome.wustl.edu	37	2	220079111	220079111	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCL	4691	genome.wustl.edu	37	2	232325441	232325441	+	Missense_Mutation	SNP	G	G	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D5	9779	genome.wustl.edu	37	3	17425426	17425426	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NKTR	4820	genome.wustl.edu	37	3	42679208	42679208	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP4	4134	genome.wustl.edu	37	3	47951282	47951282	+	Missense_Mutation	SNP	G	G	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRG	5793	genome.wustl.edu	37	3	62278200	62278200	+	Missense_Mutation	SNP	A	A	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CADPS	8618	genome.wustl.edu	37	3	62464048	62464048	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYLK	4638	genome.wustl.edu	37	3	123383094	123383094	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMOTL2	51421	genome.wustl.edu	37	3	134080403	134080403	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0226	9711	genome.wustl.edu	37	3	197444856	197444856	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRK4	2868	genome.wustl.edu	37	4	3021472	3021472	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EVC2	132884	genome.wustl.edu	37	4	5630291	5630291	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMP1	1758	genome.wustl.edu	37	4	88584074	88584074	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC3	8916	genome.wustl.edu	37	4	89527178	89527178	+	Silent	SNP	T	T	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT1	2195	genome.wustl.edu	37	4	187509893	187509893	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RICTOR	253260	genome.wustl.edu	37	5	38996929	38996929	+	Missense_Mutation	SNP	C	C	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBN2	2201	genome.wustl.edu	37	5	127654571	127654571	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDKL3	51265	genome.wustl.edu	37	5	133642368	133642368	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD8	10902	genome.wustl.edu	37	5	137496603	137496603	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB4	56131	genome.wustl.edu	37	5	140502135	140502135	+	Silent	SNP	T	T	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSPAN17	26262	genome.wustl.edu	37	5	176083740	176083740	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM6	2916	genome.wustl.edu	37	5	178408805	178408805	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUL9	23113	genome.wustl.edu	37	6	43188269	43188269	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAI3	577	genome.wustl.edu	37	6	70049294	70049294	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRAK1BP1	134728	genome.wustl.edu	37	6	79577442	79577442	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMA2	3908	genome.wustl.edu	37	6	129649469	129649469	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIVEP2	3097	genome.wustl.edu	37	6	143092591	143092591	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTHFD1L	25902	genome.wustl.edu	37	6	151331015	151331015	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PARK2	5071	genome.wustl.edu	37	6	162206907	162206907	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCB5	340273	genome.wustl.edu	37	7	20738159	20738159	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DKFZP586I1420	222161	genome.wustl.edu	37	7	30411772	30411772	+	RNA	SNP	T	T	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBX20	57057	genome.wustl.edu	37	7	35288338	35288338	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100132308	100132308	genome.wustl.edu	37	7	63020463	63020463	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTF2IRD2	84163	genome.wustl.edu	37	7	74211395	74211395	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRRAP	8295	genome.wustl.edu	37	7	98551030	98551030	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF394	84124	genome.wustl.edu	37	7	99097348	99097348	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPO	2056	genome.wustl.edu	37	7	100319326	100319326	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC3A	4584	genome.wustl.edu	37	7	100552197	100552197	+	Silent	SNP	T	T	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OPN1SW	611	genome.wustl.edu	37	7	128415072	128415072	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNPO3	23534	genome.wustl.edu	37	7	128630110	128630110	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM71	137835	genome.wustl.edu	37	8	133764099	133764099	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK2	3717	genome.wustl.edu	37	9	5126705	5126705	+	Missense_Mutation	SNP	T	T	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRD	5789	genome.wustl.edu	37	9	8528597	8528597	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BNC2	54796	genome.wustl.edu	37	9	16552698	16552698	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC13B	10497	genome.wustl.edu	37	9	35381682	35381682	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK5	5125	genome.wustl.edu	37	9	78789992	78789992	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUSK	4593	genome.wustl.edu	37	9	113530241	113530241	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OLFML2A	169611	genome.wustl.edu	37	9	127572305	127572305	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GARNL3	84253	genome.wustl.edu	37	9	130145790	130145790	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKR1C1	1645	genome.wustl.edu	37	10	5011055	5011055	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OGDHL	55753	genome.wustl.edu	37	10	50966551	50966551	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF365	22891	genome.wustl.edu	37	10	64148296	64148296	+	Missense_Mutation	SNP	G	G	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAT1A	4143	genome.wustl.edu	37	10	82043703	82043703	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGAP11	119385	genome.wustl.edu	37	10	88768445	88768445	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89725043	89725043	+	Splice_Site	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPCD	25911	genome.wustl.edu	37	10	103361062	103361062	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LGR4	55366	genome.wustl.edu	37	11	27414057	27414057	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHNAK	79026	genome.wustl.edu	37	11	62291324	62291324	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIPA1	6494	genome.wustl.edu	37	11	65417455	65417455	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PACS1	55690	genome.wustl.edu	37	11	65984193	65984193	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STARD10	10809	genome.wustl.edu	37	11	72466754	72466754	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2CD3	26005	genome.wustl.edu	37	11	73814558	73814558	+	Missense_Mutation	SNP	A	A	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALG8	79053	genome.wustl.edu	37	11	77835216	77835216	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4D5	219875	genome.wustl.edu	37	11	123811102	123811102	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP5	8078	genome.wustl.edu	37	12	6969622	6969622	+	Missense_Mutation	SNP	G	G	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERP27	121506	genome.wustl.edu	37	12	15068492	15068492	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRK2	120892	genome.wustl.edu	37	12	40704417	40704417	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACCN2	41	genome.wustl.edu	37	12	50471078	50471078	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT80	144501	genome.wustl.edu	37	12	52565197	52565197	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1	4035	genome.wustl.edu	37	12	57601869	57601869	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAV3	89795	genome.wustl.edu	37	12	78362373	78362373	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNC1	10154	genome.wustl.edu	37	12	94692519	94692519	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VSIG10	54621	genome.wustl.edu	37	12	118517241	118517241	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288312	100288312	genome.wustl.edu	37	12	125396905	125396905	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POSTN	10631	genome.wustl.edu	37	13	38160990	38160990	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RB1	5925	genome.wustl.edu	37	13	48941648	48941648	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RB1	5925	genome.wustl.edu	37	13	49039506	49039506	+	Splice_Site	SNP	T	T	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TDRD3	81550	genome.wustl.edu	37	13	61102778	61102778	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM26	64062	genome.wustl.edu	37	13	79945232	79945232	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD8	57680	genome.wustl.edu	37	14	21863147	21863147	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPF39	55015	genome.wustl.edu	37	14	45566145	45566145	+	Missense_Mutation	SNP	A	A	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUDENG	55745	genome.wustl.edu	37	14	57755522	57755522	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC7B	145567	genome.wustl.edu	37	14	91113310	91113310	+	Silent	SNP	A	A	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC79	57578	genome.wustl.edu	37	14	94087998	94087998	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ISLR2	57611	genome.wustl.edu	37	15	74425259	74425259	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HS3ST4	9951	genome.wustl.edu	37	16	26147293	26147293	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS35	55737	genome.wustl.edu	37	16	46696186	46696186	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOD2	64127	genome.wustl.edu	37	16	50733825	50733825	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTCF	10664	genome.wustl.edu	37	16	67654643	67654643	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTRB1	1504	genome.wustl.edu	37	16	75256927	75256927	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOS2	4843	genome.wustl.edu	37	17	26105788	26105788	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTNAP1	8506	genome.wustl.edu	37	17	40839042	40839042	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX40	79665	genome.wustl.edu	37	17	57644069	57644069	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCD2	6603	genome.wustl.edu	37	17	61911351	61911351	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC14L1	6397	genome.wustl.edu	37	17	75208079	75208079	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEPT9	10801	genome.wustl.edu	37	17	75398665	75398665	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC646359	646359	genome.wustl.edu	37	18	14378685	14378685	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP8B1	5205	genome.wustl.edu	37	18	55328610	55328610	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF532	55205	genome.wustl.edu	37	18	56586709	56586709	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACSBG2	81616	genome.wustl.edu	37	19	6166026	6166026	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKACA	5566	genome.wustl.edu	37	19	14208688	14208688	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
YIF1B	90522	genome.wustl.edu	37	19	38799441	38799441	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAMD4B	55095	genome.wustl.edu	37	19	39873876	39873876	+	Missense_Mutation	SNP	G	G	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLPTM1	1209	genome.wustl.edu	37	19	45490603	45490603	+	Silent	SNP	C	C	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNRNP70	6625	genome.wustl.edu	37	19	49593560	49593560	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC24A3	57419	genome.wustl.edu	37	20	19261704	19261704	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLAGL2	5326	genome.wustl.edu	37	20	30784278	30784278	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
B4GALT5	9334	genome.wustl.edu	37	20	48256282	48256282	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH4	1002	genome.wustl.edu	37	20	60485572	60485572	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP19-1	337882	genome.wustl.edu	37	21	31852407	31852407	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF295	49854	genome.wustl.edu	37	21	43411428	43411428	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PWP2	5822	genome.wustl.edu	37	21	45535214	45535214	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMOX1	3162	genome.wustl.edu	37	22	35783150	35783150	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198763	0	genome.wustl.edu	37	MT	4878	4878	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBL1X	6907	genome.wustl.edu	37	X	9683001	9683001	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR7	51284	genome.wustl.edu	37	X	12906683	12906683	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HDX	139324	genome.wustl.edu	37	X	83723496	83723496	+	Missense_Mutation	SNP	T	T	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000223499	0	genome.wustl.edu	37	X	118207887	118207887	+	Silent	SNP	A	A	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPANXN1	494118	genome.wustl.edu	37	X	144337285	144337285	+	Missense_Mutation	SNP	G	G	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLMN	11146	genome.wustl.edu	37	1	92712653	92712653	+	Missense_Mutation	SNP	T	T	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CENPL	91687	genome.wustl.edu	37	1	173772216	173772216	+	Missense_Mutation	SNP	A	A	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IPO9	55705	genome.wustl.edu	37	1	201817710	201817710	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH7	56171	genome.wustl.edu	37	2	196825024	196825024	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRP2	8828	genome.wustl.edu	37	2	206608018	206608018	+	Silent	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSK3B	2932	genome.wustl.edu	37	3	119562149	119562149	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXW7	55294	genome.wustl.edu	37	4	153273708	153273708	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H4L	8368	genome.wustl.edu	37	6	27841231	27841231	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHBDD2	57414	genome.wustl.edu	37	7	75517573	75517573	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSPP1	79848	genome.wustl.edu	37	8	68107733	68107733	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM65	157378	genome.wustl.edu	37	8	125335564	125335564	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRBV20OR9-2	6962	genome.wustl.edu	37	9	33618444	33618444	+	Silent	SNP	C	C	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC642406	642406	genome.wustl.edu	37	9	40610116	40610116	+	Missense_Mutation	SNP	G	G	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHC3	53358	genome.wustl.edu	37	9	91657028	91657028	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUL2	8453	genome.wustl.edu	37	10	35305157	35305157	+	Missense_Mutation	SNP	A	A	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APOC3	345	genome.wustl.edu	37	11	116701581	116701581	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1	4035	genome.wustl.edu	37	12	57584635	57584635	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CIT	11113	genome.wustl.edu	37	12	120263005	120263005	+	Silent	SNP	G	G	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPP2	7174	genome.wustl.edu	37	13	103299696	103299696	+	Splice_Site	SNP	T	T	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTBK2	146057	genome.wustl.edu	37	15	43093314	43093314	+	Silent	SNP	A	A	G			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS13C	54832	genome.wustl.edu	37	15	62305295	62305295	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCNN1G	6340	genome.wustl.edu	37	16	23226597	23226597	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMA1	284217	genome.wustl.edu	37	18	6982514	6982514	+	Missense_Mutation	SNP	G	G	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLIN4	729359	genome.wustl.edu	37	19	4504922	4504922	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC16	94025	genome.wustl.edu	37	19	9070753	9070753	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RCN3	57333	genome.wustl.edu	37	19	50040444	50040444	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF835	90485	genome.wustl.edu	37	19	57175767	57175767	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRP1B	23076	genome.wustl.edu	37	21	45096709	45096709	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC643873	643873	genome.wustl.edu	37	X	110864163	110864163	+	RNA	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCORL1	63035	genome.wustl.edu	37	X	129150016	129150016	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLNA	2316	genome.wustl.edu	37	X	153580009	153580009	+	Silent	SNP	G	G	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717672	89717672	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPL22	6146	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27106896	27106897	+	In_Frame_Ins	INS	-	-	CTG			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAD54L	8438	genome.wustl.edu	37	1	46743786	46743787	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MFSD9	84804	genome.wustl.edu	37	2	103348781	103348783	+	In_Frame_Del	DEL	CTA	CTA	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	CTA	CTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PMS1	5378	genome.wustl.edu	37	2	190742124	190742124	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHIC2	26511	genome.wustl.edu	37	4	54880236	54880237	+	Frame_Shift_Ins	INS	-	-	TATA			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIPBL	25836	genome.wustl.edu	37	5	37061006	37061006	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000199552	0	genome.wustl.edu	37	5	40655131	40655132	+	RNA	INS	-	-	T			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591132	67591134	+	In_Frame_Del	DEL	GAC	GAC	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	GAC	GAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000250311	0	genome.wustl.edu	37	6	26478487	26478489	+	RNA	DEL	CTT	CTT	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA2026	158358	genome.wustl.edu	37	9	5968044	5968044	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63850844	63850845	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL13A1	1305	genome.wustl.edu	37	10	71683587	71683587	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WBP11	51729	genome.wustl.edu	37	12	14949866	14949866	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL2	8085	genome.wustl.edu	37	12	49443667	49443667	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIX4	51804	genome.wustl.edu	37	14	61180923	61180924	+	Splice_Site	INS	-	-	A			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3J	8669	genome.wustl.edu	37	15	44853344	44853348	+	Frame_Shift_Del	DEL	GTGAC	GTGAC	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	GTGAC	GTGAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000230808	0	genome.wustl.edu	37	16	20114072	20114074	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAG1	182	genome.wustl.edu	37	20	10625845	10625845	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288309	100288309	genome.wustl.edu	37	22	19163577	19163578	+	Frame_Shift_Ins	INS	-	-	AT			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NHS	4810	genome.wustl.edu	37	X	17745879	17745879	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GDPD2	54857	genome.wustl.edu	37	X	69646773	69646773	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AX-A05Y-01	TCGA-AX-A05Y-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
