Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
SPEN	23013	genome.wustl.edu	37	1	16262395	16262395	+	Silent	SNP	A	A	C			TCGA-AX-A06L-01	TCGA-AX-A06L-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC30	728621	genome.wustl.edu	37	1	43076715	43076715	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TM2D1	83941	genome.wustl.edu	37	1	62190783	62190783	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCAN	63827	genome.wustl.edu	37	1	156628347	156628347	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DISP1	84976	genome.wustl.edu	37	1	223178728	223178728	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf44	80304	genome.wustl.edu	37	2	24261607	24261607	+	Missense_Mutation	SNP	A	A	C			TCGA-AX-A06L-01	TCGA-AX-A06L-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTDC1	79712	genome.wustl.edu	37	2	144709580	144709580	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SF3B1	23451	genome.wustl.edu	37	2	198281473	198281473	+	Missense_Mutation	SNP	G	G	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKQ	1609	genome.wustl.edu	37	4	959940	959940	+	Silent	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC3	11336	genome.wustl.edu	37	5	447672	447672	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOBTB3	22836	genome.wustl.edu	37	5	95091417	95091417	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB6	56130	genome.wustl.edu	37	5	140531371	140531371	+	Silent	SNP	G	G	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB16	57717	genome.wustl.edu	37	5	140563276	140563276	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB15	56121	genome.wustl.edu	37	5	140625590	140625590	+	Silent	SNP	T	T	C			TCGA-AX-A06L-01	TCGA-AX-A06L-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRGM	345611	genome.wustl.edu	37	5	150227777	150227777	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729176	729176	genome.wustl.edu	37	6	147124190	147124190	+	RNA	SNP	G	G	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNTG1	54212	genome.wustl.edu	37	8	51362262	51362262	+	Nonsense_Mutation	SNP	C	C	G			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPT	2875	genome.wustl.edu	37	8	145730784	145730784	+	Silent	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH2D3C	10044	genome.wustl.edu	37	9	130513581	130513581	+	Splice_Site	SNP	T	T	G			TCGA-AX-A06L-01	TCGA-AX-A06L-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000250793	0	genome.wustl.edu	37	10	87407329	87407329	+	RNA	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89690801	89690801	+	Splice_Site	SNP	A	A	G			TCGA-AX-A06L-01	TCGA-AX-A06L-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBF1	8729	genome.wustl.edu	37	10	104142011	104142011	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFKB2	4791	genome.wustl.edu	37	10	104160207	104160207	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB16	7704	genome.wustl.edu	37	11	114118017	114118017	+	Silent	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD4	1108	genome.wustl.edu	37	12	6702279	6702279	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL2	8085	genome.wustl.edu	37	12	49435229	49435229	+	Silent	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TGDS	23483	genome.wustl.edu	37	13	95229656	95229656	+	Missense_Mutation	SNP	T	T	C			TCGA-AX-A06L-01	TCGA-AX-A06L-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM9	114088	genome.wustl.edu	37	14	51448776	51448776	+	Missense_Mutation	SNP	A	A	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBR1	197131	genome.wustl.edu	37	15	43329975	43329975	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STOML1	9399	genome.wustl.edu	37	15	74277004	74277004	+	Silent	SNP	A	A	G			TCGA-AX-A06L-01	TCGA-AX-A06L-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHRNB4	1143	genome.wustl.edu	37	15	78921917	78921917	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH1	999	genome.wustl.edu	37	16	68862107	68862107	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL11	55175	genome.wustl.edu	37	17	40011489	40011489	+	Silent	SNP	G	G	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPATCH8	23131	genome.wustl.edu	37	17	42477332	42477332	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729602	729602	genome.wustl.edu	37	18	11621276	11621276	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TGIF2	60436	genome.wustl.edu	37	20	35219567	35219567	+	Silent	SNP	G	G	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNQ2	3785	genome.wustl.edu	37	20	62038258	62038258	+	Silent	SNP	C	C	T			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR1	9620	genome.wustl.edu	37	22	46932115	46932115	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2S3	1968	genome.wustl.edu	37	X	24073092	24073092	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR513B	100313822	genome.wustl.edu	37	X	146280564	146280564	+	RNA	SNP	C	C	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5M11	219487	genome.wustl.edu	37	11	56310149	56310149	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27099425	27099426	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AX-A06L-01	TCGA-AX-A06L-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSGEPL1	64172	genome.wustl.edu	37	2	190626330	190626331	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AX-A06L-01	TCGA-AX-A06L-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALKBH5	54890	genome.wustl.edu	37	17	18111803	18111809	+	Frame_Shift_Del	DEL	TTTTTGT	TTTTTGT	-			TCGA-AX-A06L-01	TCGA-AX-A06L-01	TTTTTGT	TTTTTGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHOSPHO1	162466	genome.wustl.edu	37	17	47302390	47302392	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-AX-A06L-01	TCGA-AX-A06L-01	AGG	AGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
