Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
DVL1	1855	genome.wustl.edu	37	1	1274812	1274812	+	Silent	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27105553	27105553	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2J2	1573	genome.wustl.edu	37	1	60381745	60381745	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USH2A	7399	genome.wustl.edu	37	1	216166392	216166392	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AADAC	13	genome.wustl.edu	37	3	151545849	151545849	+	Silent	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRF2	3660	genome.wustl.edu	37	4	185320124	185320124	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645181	645181	genome.wustl.edu	37	5	84845562	84845562	+	RNA	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRAMD3	65983	genome.wustl.edu	37	5	125822612	125822612	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF15	23338	genome.wustl.edu	37	5	133896438	133896438	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB6	56130	genome.wustl.edu	37	5	140531021	140531021	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC36A3	285641	genome.wustl.edu	37	5	150663636	150663636	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100128588	100128588	genome.wustl.edu	37	6	112647806	112647806	+	Missense_Mutation	SNP	T	T	G			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS4L1	285905	genome.wustl.edu	37	7	64673146	64673146	+	RNA	SNP	G	G	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GDA	9615	genome.wustl.edu	37	9	74828843	74828843	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692896	89692896	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692935	89692935	+	Nonsense_Mutation	SNP	T	T	G			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25380275	25380275	+	Missense_Mutation	SNP	T	T	G			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP6	9472	genome.wustl.edu	37	14	33291977	33291977	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APBA2	321	genome.wustl.edu	37	15	29346180	29346180	+	Silent	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BNC1	646	genome.wustl.edu	37	15	83932868	83932868	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GUCY2D	3000	genome.wustl.edu	37	17	7918688	7918688	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1267	284058	genome.wustl.edu	37	17	44248470	44248470	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KAT7	11143	genome.wustl.edu	37	17	47903466	47903466	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf56	51398	genome.wustl.edu	37	19	12780184	12780184	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PEG3	5178	genome.wustl.edu	37	19	57328030	57328030	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf11	54994	genome.wustl.edu	37	20	61576260	61576260	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP21-3	100288323	genome.wustl.edu	37	21	32091035	32091035	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSCAM	1826	genome.wustl.edu	37	21	41719671	41719671	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC442459	442459	genome.wustl.edu	37	X	98974960	98974960	+	RNA	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR106A	406899	genome.wustl.edu	37	X	133304300	133304300	+	RNA	SNP	T	T	G			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELA2A	63036	genome.wustl.edu	37	1	15788136	15788136	+	Silent	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPP4B	8821	genome.wustl.edu	37	4	143130127	143130127	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDH7A1	501	genome.wustl.edu	37	5	125930950	125930950	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADCY8	114	genome.wustl.edu	37	8	131955704	131955704	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF213	57674	genome.wustl.edu	37	17	78282928	78282928	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000175388	0	genome.wustl.edu	37	18	10773471	10773471	+	Silent	SNP	G	G	A			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM3B	51780	genome.wustl.edu	37	5	137727125	137727125	+	Frame_Shift_Del	DEL	A	A	-			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMYM2	7750	genome.wustl.edu	37	13	20579371	20579372	+	Frame_Shift_Ins	INS	-	-	T			TCGA-B5-A0JS-01	TCGA-B5-A0JS-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
