Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
GBP1	2633	genome.wustl.edu	37	1	89528913	89528913	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAF5	7188	genome.wustl.edu	37	1	211545736	211545736	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMN2	56776	genome.wustl.edu	37	1	240371223	240371223	+	Silent	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACVR1	90	genome.wustl.edu	37	2	158630626	158630626	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLCL1	5334	genome.wustl.edu	37	2	198948824	198948824	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERBB4	2066	genome.wustl.edu	37	2	212543781	212543781	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY3	23001	genome.wustl.edu	37	4	85600322	85600322	+	Silent	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMRN1	22915	genome.wustl.edu	37	4	90856506	90856506	+	Missense_Mutation	SNP	A	A	C			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMPR1B	658	genome.wustl.edu	37	4	96051103	96051103	+	Nonsense_Mutation	SNP	G	G	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67589562	67589562	+	Missense_Mutation	SNP	T	T	G			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC23A1	9963	genome.wustl.edu	37	5	138716569	138716569	+	Silent	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB9	56127	genome.wustl.edu	37	5	140569076	140569076	+	Silent	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSPO2	222642	genome.wustl.edu	37	6	41010878	41010878	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729603	729603	genome.wustl.edu	37	6	160514634	160514634	+	RNA	SNP	A	A	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPDYE7P	441251	genome.wustl.edu	37	7	72336957	72336957	+	RNA	SNP	C	C	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAZ1B	9031	genome.wustl.edu	37	7	72903688	72903688	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A40	55972	genome.wustl.edu	37	7	87485696	87485696	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZAN	7455	genome.wustl.edu	37	7	100344204	100344204	+	Silent	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645960	645960	genome.wustl.edu	37	8	8819536	8819536	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHB	6461	genome.wustl.edu	37	9	37955915	37955915	+	Missense_Mutation	SNP	T	T	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BSPRY	54836	genome.wustl.edu	37	9	116132395	116132395	+	Silent	SNP	C	C	G			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RET	5979	genome.wustl.edu	37	10	43610086	43610086	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692892	89692892	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89720817	89720817	+	Missense_Mutation	SNP	A	A	C			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89725043	89725043	+	Splice_Site	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGFR2	2263	genome.wustl.edu	37	10	123258034	123258034	+	Missense_Mutation	SNP	A	A	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5D16	390144	genome.wustl.edu	37	11	55606741	55606741	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM111A	63901	genome.wustl.edu	37	11	58916408	58916408	+	Silent	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAS2R30	259293	genome.wustl.edu	37	12	11286214	11286214	+	Silent	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1467	57613	genome.wustl.edu	37	12	13220149	13220149	+	Nonsense_Mutation	SNP	C	C	G			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED13L	23389	genome.wustl.edu	37	12	116446900	116446900	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLNR	2862	genome.wustl.edu	37	13	49796255	49796255	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM9	114088	genome.wustl.edu	37	14	51561057	51561057	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIO3	1735	genome.wustl.edu	37	14	102028448	102028448	+	Silent	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TECPR2	9895	genome.wustl.edu	37	14	102904460	102904460	+	Silent	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDAN1	146059	genome.wustl.edu	37	15	43028233	43028233	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XYLT1	64131	genome.wustl.edu	37	16	17232374	17232374	+	Silent	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC12A3	6559	genome.wustl.edu	37	16	56926062	56926062	+	Silent	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS9	8787	genome.wustl.edu	37	17	63164391	63164391	+	Silent	SNP	C	C	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HELZ	9931	genome.wustl.edu	37	17	65105571	65105571	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC7	23265	genome.wustl.edu	37	17	74097902	74097902	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000188314	0	genome.wustl.edu	37	19	9346183	9346183	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LDLR	3949	genome.wustl.edu	37	19	11213431	11213431	+	Silent	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF568	374900	genome.wustl.edu	37	19	37413737	37413737	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSKS	60385	genome.wustl.edu	37	19	50248524	50248524	+	Silent	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF304	57343	genome.wustl.edu	37	19	57867860	57867860	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf46	55321	genome.wustl.edu	37	20	1161829	1161829	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SULF2	55959	genome.wustl.edu	37	20	46295005	46295005	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP22-1	337979	genome.wustl.edu	37	21	31973469	31973469	+	Silent	SNP	C	C	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRMT2A	27037	genome.wustl.edu	37	22	20100501	20100501	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCB1	6598	genome.wustl.edu	37	22	24135794	24135794	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIMK2	3985	genome.wustl.edu	37	22	31658666	31658666	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYTH4	27128	genome.wustl.edu	37	22	37688718	37688718	+	Silent	SNP	C	C	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198786	0	genome.wustl.edu	37	MT	13418	13418	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFX	7543	genome.wustl.edu	37	X	24229432	24229432	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTMR8	55613	genome.wustl.edu	37	X	63488655	63488655	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATRX	546	genome.wustl.edu	37	X	76939716	76939716	+	Silent	SNP	G	G	A			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
H2BFWT	158983	genome.wustl.edu	37	X	103268036	103268036	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCORL1	63035	genome.wustl.edu	37	X	129147887	129147887	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM9A	171482	genome.wustl.edu	37	X	8766463	8766463	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27092740	27092741	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	GG	GG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP2	4036	genome.wustl.edu	37	2	170081881	170081882	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67589620	67589620	+	Frame_Shift_Del	DEL	A	A	-			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67589622	67589623	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFHA2	286097	genome.wustl.edu	37	8	16944491	16944491	+	Frame_Shift_Del	DEL	A	A	-			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM200C	645369	genome.wustl.edu	37	18	5892000	5892001	+	Frame_Shift_Ins	INS	-	-	G			TCGA-B5-A0K1-01	TCGA-B5-A0K1-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
