Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
EIF4G3	8672	genome.wustl.edu	37	1	21191728	21191728	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZC3H12A	80149	genome.wustl.edu	37	1	37947347	37947347	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLK3	1263	genome.wustl.edu	37	1	45270453	45270453	+	Splice_Site	SNP	T	T	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGT	183	genome.wustl.edu	37	1	230846279	230846279	+	Silent	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJB2	3300	genome.wustl.edu	37	2	220145359	220145359	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTR1F	3355	genome.wustl.edu	37	3	88040175	88040175	+	Silent	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLSTN2	64084	genome.wustl.edu	37	3	140277628	140277628	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178916891	178916891	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178951957	178951957	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BOD1L	259282	genome.wustl.edu	37	4	13605971	13605971	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBCK	93627	genome.wustl.edu	37	4	107154174	107154174	+	Silent	SNP	T	T	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXP4	116113	genome.wustl.edu	37	6	41557909	41557909	+	Splice_Site	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXO3	2309	genome.wustl.edu	37	6	108985092	108985092	+	Silent	SNP	C	C	G			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR60	55112	genome.wustl.edu	37	7	158734723	158734723	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCM4	4173	genome.wustl.edu	37	8	48878888	48878888	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HEATR7A	727957	genome.wustl.edu	37	8	145246629	145246629	+	Silent	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IARS	3376	genome.wustl.edu	37	9	95050494	95050494	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMD4A	55691	genome.wustl.edu	37	10	13735744	13735744	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF25	219749	genome.wustl.edu	37	10	38246020	38246020	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5P2	120065	genome.wustl.edu	37	11	7818013	7818013	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCUBE2	57758	genome.wustl.edu	37	11	9111264	9111264	+	Silent	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRJ	5795	genome.wustl.edu	37	11	48157628	48157628	+	Silent	SNP	C	C	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4X1	390113	genome.wustl.edu	37	11	48286000	48286000	+	Silent	SNP	G	G	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PVRL1	5818	genome.wustl.edu	37	11	119549377	119549377	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NID2	22795	genome.wustl.edu	37	14	52507530	52507530	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC440180	440180	genome.wustl.edu	37	14	57508939	57508939	+	RNA	SNP	T	T	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFYVE19	84936	genome.wustl.edu	37	15	41105602	41105602	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLPX	10845	genome.wustl.edu	37	15	65451045	65451045	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRK1	79705	genome.wustl.edu	37	15	101605860	101605860	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1H	8912	genome.wustl.edu	37	16	1265066	1265066	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASPHD1	253982	genome.wustl.edu	37	16	29912847	29912847	+	Silent	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7577022	7577022	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT32	3882	genome.wustl.edu	37	17	39620625	39620625	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XYLT2	64132	genome.wustl.edu	37	17	48433313	48433313	+	Silent	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMCHD1	23347	genome.wustl.edu	37	18	2688746	2688746	+	Splice_Site	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF611	81856	genome.wustl.edu	37	19	53209650	53209650	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD6	84181	genome.wustl.edu	37	20	40053975	40053975	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SULF2	55959	genome.wustl.edu	37	20	46288475	46288475	+	Splice_Site	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM65C	140876	genome.wustl.edu	37	20	49226165	49226165	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC5A1	6523	genome.wustl.edu	37	22	32480899	32480899	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210082	0	genome.wustl.edu	37	MT	2702	2702	+	RNA	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WWC3	55841	genome.wustl.edu	37	X	10085463	10085463	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF1	6872	genome.wustl.edu	37	X	70603920	70603920	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR112	139378	genome.wustl.edu	37	X	135405545	135405545	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCHS2	54798	genome.wustl.edu	37	4	155410552	155410552	+	Silent	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC389740	389740	genome.wustl.edu	37	9	66517577	66517577	+	RNA	SNP	C	C	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBL3	10607	genome.wustl.edu	37	16	2028342	2028342	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CES3	23491	genome.wustl.edu	37	16	67000757	67000757	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11I-01	TCGA-B5-A11I-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARL16	339231	genome.wustl.edu	37	17	79648803	79648803	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNJ2	8871	genome.wustl.edu	37	6	158508008	158508009	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B5-A11I-01	TCGA-B5-A11I-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
