Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ARID1A	8289	genome.wustl.edu	37	1	27057973	27057973	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPYD	1806	genome.wustl.edu	37	1	98039426	98039426	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROX1	5629	genome.wustl.edu	37	1	214171556	214171556	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSCN	84033	genome.wustl.edu	37	1	228467940	228467940	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APOB	338	genome.wustl.edu	37	2	21260108	21260108	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC7A	57217	genome.wustl.edu	37	2	47177665	47177665	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644456	644456	genome.wustl.edu	37	2	58688244	58688244	+	RNA	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADD2	119	genome.wustl.edu	37	2	70905924	70905924	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INO80D	54891	genome.wustl.edu	37	2	206874391	206874391	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNS1	7145	genome.wustl.edu	37	2	218678441	218678441	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP2B2	491	genome.wustl.edu	37	3	10417136	10417136	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266100	41266100	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11X-01	TCGA-B5-A11X-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR52	55779	genome.wustl.edu	37	3	113052263	113052263	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHB1	2047	genome.wustl.edu	37	3	134670510	134670510	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178916728	178916728	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178917478	178917478	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCARB2	950	genome.wustl.edu	37	4	77096968	77096968	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11X-01	TCGA-B5-A11X-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB2	56133	genome.wustl.edu	37	5	140476372	140476372	+	Silent	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H4D	8360	genome.wustl.edu	37	6	26189262	26189262	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSP90AB1	3326	genome.wustl.edu	37	6	44217133	44217133	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMK2B	816	genome.wustl.edu	37	7	44281817	44281817	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC17	140453	genome.wustl.edu	37	7	100682802	100682802	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LUC7L2	51631	genome.wustl.edu	37	7	139092031	139092031	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCM1	5108	genome.wustl.edu	37	8	17863822	17863822	+	Silent	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RALYL	138046	genome.wustl.edu	37	8	85441621	85441621	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TG	7038	genome.wustl.edu	37	8	133961173	133961173	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SARDH	1757	genome.wustl.edu	37	9	136584058	136584058	+	Splice_Site	SNP	A	A	G			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HKDC1	80201	genome.wustl.edu	37	10	70998834	70998834	+	Silent	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC5B	727897	genome.wustl.edu	37	11	1262585	1262585	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLB1L3	112937	genome.wustl.edu	37	11	134147714	134147714	+	Silent	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT6B	3854	genome.wustl.edu	37	12	52841137	52841137	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRGAP1	57522	genome.wustl.edu	37	12	64456756	64456756	+	Silent	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX54	79039	genome.wustl.edu	37	12	113617797	113617797	+	Silent	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM70B	348013	genome.wustl.edu	37	13	114469115	114469115	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHM	3507	genome.wustl.edu	37	14	106322172	106322172	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC2	8924	genome.wustl.edu	37	15	28360632	28360632	+	Silent	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIN3A	25942	genome.wustl.edu	37	15	75674045	75674045	+	Missense_Mutation	SNP	A	A	C			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAIAP3	8938	genome.wustl.edu	37	16	1392245	1392245	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC13A5	284111	genome.wustl.edu	37	17	6594246	6594246	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD3	1107	genome.wustl.edu	37	17	7807889	7807889	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTROB	116840	genome.wustl.edu	37	17	7851000	7851000	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED13	9969	genome.wustl.edu	37	17	60088386	60088386	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEDD4L	23327	genome.wustl.edu	37	18	56050532	56050532	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EEF2	1938	genome.wustl.edu	37	19	3982300	3982300	+	Silent	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSHZ3	57616	genome.wustl.edu	37	19	31769277	31769277	+	Silent	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRH	5794	genome.wustl.edu	37	19	55696971	55696971	+	Silent	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198763	0	genome.wustl.edu	37	MT	5269	5269	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11X-01	TCGA-B5-A11X-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNKSR2	22866	genome.wustl.edu	37	X	21458859	21458859	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11X-01	TCGA-B5-A11X-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF8L1	139425	genome.wustl.edu	37	X	27998032	27998032	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMC1A	8243	genome.wustl.edu	37	X	53407567	53407567	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED12	9968	genome.wustl.edu	37	X	70343021	70343021	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RLIM	51132	genome.wustl.edu	37	X	73815791	73815791	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGAG1	57529	genome.wustl.edu	37	X	109696151	109696151	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LDOC1	23641	genome.wustl.edu	37	X	140271105	140271105	+	Silent	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf71	388939	genome.wustl.edu	37	2	29295352	29295352	+	Silent	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNA1	5361	genome.wustl.edu	37	3	126733176	126733176	+	Silent	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288554	100288554	genome.wustl.edu	37	4	9431335	9431335	+	Silent	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf13	9315	genome.wustl.edu	37	5	111066620	111066620	+	Nonstop_Mutation	SNP	A	A	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHPRH	257218	genome.wustl.edu	37	6	146276252	146276252	+	Missense_Mutation	SNP	A	A	C			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PEX1	5189	genome.wustl.edu	37	7	92129128	92129128	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SULF1	23213	genome.wustl.edu	37	8	70533457	70533457	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS13	11093	genome.wustl.edu	37	9	136290691	136290691	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY4	57705	genome.wustl.edu	37	10	50028406	50028406	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GHITM	27069	genome.wustl.edu	37	10	85909925	85909925	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP5-1	387264	genome.wustl.edu	37	11	1605790	1605790	+	Silent	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL6A2	1292	genome.wustl.edu	37	21	47539000	47539000	+	Silent	SNP	C	C	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM47B	170062	genome.wustl.edu	37	X	34961511	34961511	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11X-01	TCGA-B5-A11X-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27107092	27107095	+	Frame_Shift_Del	DEL	GCCC	GCCC	-			TCGA-B5-A11X-01	TCGA-B5-A11X-01	GCCC	GCCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTCF	10664	genome.wustl.edu	37	16	67644787	67644787	+	Frame_Shift_Del	DEL	A	A	-			TCGA-B5-A11X-01	TCGA-B5-A11X-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
