Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
USP48	84196	genome.wustl.edu	37	1	22078013	22078013	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMYM6	9204	genome.wustl.edu	37	1	35476529	35476529	+	Missense_Mutation	SNP	C	C	G			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGL	178	genome.wustl.edu	37	1	100356892	100356892	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAM15	8751	genome.wustl.edu	37	1	155032820	155032820	+	Splice_Site	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCAMP3	10067	genome.wustl.edu	37	1	155226122	155226122	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLK2	1196	genome.wustl.edu	37	1	155234212	155234212	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C4BPA	722	genome.wustl.edu	37	1	207317180	207317180	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HHIPL2	79802	genome.wustl.edu	37	1	222696035	222696035	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2W5	441932	genome.wustl.edu	37	1	247654943	247654943	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR14K1	343170	genome.wustl.edu	37	1	247902807	247902807	+	Silent	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PUM2	23369	genome.wustl.edu	37	2	20508090	20508090	+	Silent	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MOBKL1B	55233	genome.wustl.edu	37	2	74392328	74392328	+	Silent	SNP	C	C	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDK15	65061	genome.wustl.edu	37	2	202698630	202698630	+	Silent	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA12	26154	genome.wustl.edu	37	2	215823162	215823162	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VHL	7428	genome.wustl.edu	37	3	10188287	10188287	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPOX	1371	genome.wustl.edu	37	3	98304389	98304389	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
METAP1	23173	genome.wustl.edu	37	4	99978957	99978957	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF2A	3796	genome.wustl.edu	37	5	61654113	61654113	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA10	56139	genome.wustl.edu	37	5	140237073	140237073	+	Silent	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFAND3	60685	genome.wustl.edu	37	6	38120118	38120118	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PARK2	5071	genome.wustl.edu	37	6	161990445	161990445	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6B1	135946	genome.wustl.edu	37	7	143701315	143701315	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF5B	3799	genome.wustl.edu	37	10	32306235	32306235	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717609	89717609	+	Splice_Site	SNP	G	G	C			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWCE	220001	genome.wustl.edu	37	11	61026327	61026327	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PC	5091	genome.wustl.edu	37	11	66631260	66631260	+	Silent	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUAK1	9891	genome.wustl.edu	37	12	106480618	106480618	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHRS4L2	317749	genome.wustl.edu	37	14	24470115	24470115	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HECTD1	25831	genome.wustl.edu	37	14	31590627	31590627	+	Missense_Mutation	SNP	C	C	G			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729941	729941	genome.wustl.edu	37	14	71797243	71797243	+	RNA	SNP	A	A	G			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF7	374654	genome.wustl.edu	37	15	90174806	90174806	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP7	7874	genome.wustl.edu	37	16	8999107	8999107	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A10P	386757	genome.wustl.edu	37	16	32894110	32894110	+	RNA	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A5	6553	genome.wustl.edu	37	16	67293485	67293485	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000231452	0	genome.wustl.edu	37	18	12068091	12068091	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNG2	26251	genome.wustl.edu	37	18	77659559	77659559	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL9	164395	genome.wustl.edu	37	20	30522508	30522508	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2S3	1968	genome.wustl.edu	37	X	24091292	24091292	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXO4	4303	genome.wustl.edu	37	X	70316510	70316510	+	Silent	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGAG4	340526	genome.wustl.edu	37	X	71350299	71350299	+	Silent	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS16	6004	genome.wustl.edu	37	1	182571199	182571199	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPDYE5	442590	genome.wustl.edu	37	7	75126032	75126032	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TECPR1	25851	genome.wustl.edu	37	7	97863162	97863162	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100132672	100132672	genome.wustl.edu	37	9	69502181	69502181	+	RNA	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSD	5662	genome.wustl.edu	37	10	104176485	104176485	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYT8	90019	genome.wustl.edu	37	11	1858596	1858596	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGSM2	9905	genome.wustl.edu	37	17	2274578	2274578	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF536	9745	genome.wustl.edu	37	19	31040282	31040282	+	Silent	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLUD2	2747	genome.wustl.edu	37	X	120181719	120181719	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCFC1	3054	genome.wustl.edu	37	X	153220133	153220133	+	Silent	SNP	G	G	A			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27106799	27106799	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178928110	178928115	+	In_Frame_Del	DEL	GATCAA	GATCAA	-			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	GATCAA	GATCAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC653071	653071	genome.wustl.edu	37	4	68700	68700	+	RNA	DEL	T	T	-			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATM	472	genome.wustl.edu	37	11	108180958	108180959	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTU2	348180	genome.wustl.edu	37	16	88780635	88780640	+	Frame_Shift_Del	DEL	GGTGTG	GGTGTG	-			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	GGTGTG	GGTGTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASD1	51655	genome.wustl.edu	37	17	17399468	17399470	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644157	644157	genome.wustl.edu	37	17	43664584	43664586	+	RNA	DEL	CCC	CCC	-			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	CCC	CCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LENG9	94059	genome.wustl.edu	37	19	54973989	54973991	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-BG-A0MT-01	TCGA-BG-A0MT-01	CCT	CCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
